Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:40:47 (3370929): wrapper (7.7.26015): starting
01:40:47 (3370929): wrapper: running run_atlas (--nthreads 4)
[2025-10-14 01:40:47] Arguments: --nthreads 4
[2025-10-14 01:40:47] Threads: 4
[2025-10-14 01:40:47] Checking for CVMFS
[2025-10-14 01:40:47] No cvmfs_config command found, will try listing directly
[2025-10-14 01:40:47] CVMFS is ok
[2025-10-14 01:40:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 01:40:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 01:40:47] Further information can be found at the LHC@home message board.
[2025-10-14 01:40:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 01:40:47] Checking for apptainer binary...
[2025-10-14 01:40:47] which: no apptainer in ((null))
[2025-10-14 01:40:47] apptainer is not installed, using version from CVMFS
[2025-10-14 01:40:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 01:40:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-10-14 01:40:47] apptainer works
[2025-10-14 01:40:47] Set ATHENA_PROC_NUMBER=4
[2025-10-14 01:40:47] Set ATHENA_CORE_NUMBER=4
[2025-10-14 01:40:47] Starting ATLAS job with PandaID=6838454857
[2025-10-14 01:40:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 04:43:27]  *** The last 200 lines of the pilot log: ***
[2025-10-14 04:43:27] 2025-10-14 02:40:49,181 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 04:43:27] 2025-10-14 02:40:49,185 | INFO     | fitting pss+swap vs Time
[2025-10-14 04:43:27] 2025-10-14 02:40:49,185 | INFO     | sum of square deviations: 1719429448.0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,186 | INFO     | sum of deviations: 5902599425.0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,186 | INFO     | mean x: 1760404255.0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,186 | INFO     | mean y: 2319037.04519774
[2025-10-14 04:43:27] 2025-10-14 02:40:49,186 | INFO     | -- intersect: -6040942089.729778
[2025-10-14 04:43:27] 2025-10-14 02:40:49,186 | INFO     | intersect: -6040942089.729778
[2025-10-14 04:43:27] 2025-10-14 02:40:49,187 | INFO     | chi2: 2.040327416106103
[2025-10-14 04:43:27] 2025-10-14 02:40:49,187 | INFO     | sum of square deviations: 1577789583.0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,188 | INFO     | sum of deviations: 15654587075.000002
[2025-10-14 04:43:27] 2025-10-14 02:40:49,188 | INFO     | mean x: 1760404102.5
[2025-10-14 04:43:27] 2025-10-14 02:40:49,188 | INFO     | mean y: 2329286.1279069767
[2025-10-14 04:43:27] 2025-10-14 02:40:49,189 | INFO     | -- intersect: -17464131138.445374
[2025-10-14 04:43:27] 2025-10-14 02:40:49,189 | INFO     | intersect: -17464131138.445374
[2025-10-14 04:43:27] 2025-10-14 02:40:49,189 | INFO     | chi2: 1.3796993661383359
[2025-10-14 04:43:27] 2025-10-14 02:40:49,189 | INFO     | current chi2=1.3796993661383359 (change=32.37853124713453 %)
[2025-10-14 04:43:27] 2025-10-14 02:40:49,189 | INFO     | sum of square deviations: 1444149868.0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,190 | INFO     | sum of deviations: 15080216687.0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,190 | INFO     | mean x: 1760403950.0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,191 | INFO     | mean y: 2328631.0538922157
[2025-10-14 04:43:27] 2025-10-14 02:40:49,191 | INFO     | -- intersect: -18380301600.679585
[2025-10-14 04:43:27] 2025-10-14 02:40:49,191 | INFO     | intersect: -18380301600.679585
[2025-10-14 04:43:27] 2025-10-14 02:40:49,191 | INFO     | chi2: 1.3808475222739334
[2025-10-14 04:43:27] 2025-10-14 02:40:49,191 | INFO     | current chi2=1.3808475222739334 (change=-0.08321784903120473 %)
[2025-10-14 04:43:27] 2025-10-14 02:40:49,191 | INFO     | right removable region: 166
[2025-10-14 04:43:27] 2025-10-14 02:40:49,192 | INFO     | sum of square deviations: 1577789583.0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,192 | INFO     | sum of deviations: -17638606341.0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,193 | INFO     | mean x: 1760404407.5
[2025-10-14 04:43:27] 2025-10-14 02:40:49,193 | INFO     | mean y: 2344038.534883721
[2025-10-14 04:43:27] 2025-10-14 02:40:49,193 | INFO     | -- intersect: 19682458978.711826
[2025-10-14 04:43:27] 2025-10-14 02:40:49,193 | INFO     | intersect: 19682458978.711826
[2025-10-14 04:43:27] 2025-10-14 02:40:49,193 | INFO     | chi2: 0.6941437753879077
[2025-10-14 04:43:27] 2025-10-14 02:40:49,193 | INFO     | current chi2=0.6941437753879077 (change=65.97880468064004 %)
[2025-10-14 04:43:27] 2025-10-14 02:40:49,194 | INFO     | sum of square deviations: 1444149868.0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,195 | INFO     | sum of deviations: -16371930422.0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,195 | INFO     | mean x: 1760404560.0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,195 | INFO     | mean y: 2342587.6706586825
[2025-10-14 04:43:27] 2025-10-14 02:40:49,195 | INFO     | -- intersect: 19959565594.453167
[2025-10-14 04:43:27] 2025-10-14 02:40:49,195 | INFO     | intersect: 19959565594.453167
[2025-10-14 04:43:27] 2025-10-14 02:40:49,195 | INFO     | chi2: 0.694259603582105
[2025-10-14 04:43:27] 2025-10-14 02:40:49,195 | INFO     | current chi2=0.694259603582105 (change=-0.016686484602211008 %)
[2025-10-14 04:43:27] 2025-10-14 02:40:49,195 | INFO     | left removable region: 20
[2025-10-14 04:43:27] 2025-10-14 02:40:49,196 | INFO     | sum of square deviations: 964976232.5
[2025-10-14 04:43:27] 2025-10-14 02:40:49,196 | INFO     | sum of deviations: -3588240179.4999995
[2025-10-14 04:43:27] 2025-10-14 02:40:49,197 | INFO     | mean x: 1760404529.5
[2025-10-14 04:43:27] 2025-10-14 02:40:49,197 | INFO     | mean y: 2350211.157534247
[2025-10-14 04:43:27] 2025-10-14 02:40:49,197 | INFO     | -- intersect: 6548370778.483469
[2025-10-14 04:43:27] 2025-10-14 02:40:49,197 | INFO     | intersect: 6548370778.483469
[2025-10-14 04:43:27] 2025-10-14 02:40:49,197 | INFO     | chi2: 0.010492194900408855
[2025-10-14 04:43:27] 2025-10-14 02:40:49,197 | INFO     | -- intersect: 6548370778.483469
[2025-10-14 04:43:27] 2025-10-14 02:40:49,197 | INFO     | current memory leak: -3.72 B/s (using 146 data points, chi2=0.01)
[2025-10-14 04:43:27] 2025-10-14 02:40:49,198 | INFO     | could have reported an average CPU frequency of 2643 MHz (9 samples)
[2025-10-14 04:43:27] 2025-10-14 02:40:49,198 | INFO     | ..............................
[2025-10-14 04:43:27] 2025-10-14 02:40:49,198 | INFO     | . Timing measurements:
[2025-10-14 04:43:27] 2025-10-14 02:40:49,198 | INFO     | . get job = 0 s
[2025-10-14 04:43:27] 2025-10-14 02:40:49,198 | INFO     | . initial setup = 1 s
[2025-10-14 04:43:27] 2025-10-14 02:40:49,198 | INFO     | . payload setup = 6 s
[2025-10-14 04:43:27] 2025-10-14 02:40:49,198 | INFO     | . stage-in = 0 s
[2025-10-14 04:43:27] 2025-10-14 02:40:49,198 | INFO     | . payload execution = 10755 s
[2025-10-14 04:43:27] 2025-10-14 02:40:49,199 | INFO     | . stage-out = 0 s
[2025-10-14 04:43:27] 2025-10-14 02:40:49,199 | INFO     | . log creation = 0 s
[2025-10-14 04:43:27] 2025-10-14 02:40:49,199 | INFO     | ..............................
[2025-10-14 04:43:27] 2025-10-14 02:40:49,295 | INFO     | 
[2025-10-14 04:43:27] 2025-10-14 02:40:49,295 | INFO     | job summary report
[2025-10-14 04:43:27] 2025-10-14 02:40:49,295 | INFO     | --------------------------------------------------
[2025-10-14 04:43:27] 2025-10-14 02:40:49,295 | INFO     | PanDA job id: 6838454857
[2025-10-14 04:43:27] 2025-10-14 02:40:49,295 | INFO     | task id: 46676269
[2025-10-14 04:43:27] 2025-10-14 02:40:49,295 | INFO     | errors: (none)
[2025-10-14 04:43:27] 2025-10-14 02:40:49,295 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 04:43:27] 2025-10-14 02:40:49,296 | INFO     | pilot state: finished 
[2025-10-14 04:43:27] 2025-10-14 02:40:49,296 | INFO     | transexitcode: 0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,296 | INFO     | exeerrorcode: 0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,296 | INFO     | exeerrordiag: 
[2025-10-14 04:43:27] 2025-10-14 02:40:49,296 | INFO     | exitcode: 0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,296 | INFO     | exitmsg: OK
[2025-10-14 04:43:27] 2025-10-14 02:40:49,296 | INFO     | cpuconsumptiontime: 41610 s
[2025-10-14 04:43:27] 2025-10-14 02:40:49,296 | INFO     | nevents: 400
[2025-10-14 04:43:27] 2025-10-14 02:40:49,296 | INFO     | neventsw: 0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,296 | INFO     | pid: 3414456
[2025-10-14 04:43:27] 2025-10-14 02:40:49,296 | INFO     | pgrp: 3414456
[2025-10-14 04:43:27] 2025-10-14 02:40:49,296 | INFO     | corecount: 4
[2025-10-14 04:43:27] 2025-10-14 02:40:49,296 | INFO     | event service: False
[2025-10-14 04:43:27] 2025-10-14 02:40:49,297 | INFO     | sizes: {0: 2348697, 1: 2348896, 5: 2349158, 11: 2349214, 10764: 2378288, 10767: 2387492, 10773: 2387694}
[2025-10-14 04:43:27] 2025-10-14 02:40:49,297 | INFO     | --------------------------------------------------
[2025-10-14 04:43:27] 2025-10-14 02:40:49,297 | INFO     | 
[2025-10-14 04:43:27] 2025-10-14 02:40:49,297 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-14 04:43:27] 2025-10-14 02:40:49,317 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,317 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,318 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,318 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,318 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,318 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,318 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,319 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,319 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,319 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,319 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,319 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 04:43:27] 2025-10-14 02:40:49,319 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,319 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 04:43:27] 2025-10-14 02:40:49,319 | INFO     | job 6838454857 has completed (purged errors)
[2025-10-14 04:43:27] 2025-10-14 02:40:49,320 | INFO     | overall cleanup function is called
[2025-10-14 04:43:27] 2025-10-14 02:40:50,327 | INFO     | --- collectZombieJob: --- 10, [3414456]
[2025-10-14 04:43:27] 2025-10-14 02:40:50,327 | INFO     | zombie collector waiting for pid 3414456
[2025-10-14 04:43:27] 2025-10-14 02:40:50,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 04:43:27] 2025-10-14 02:40:50,328 | INFO     | collected zombie processes
[2025-10-14 04:43:27] 2025-10-14 02:40:50,328 | INFO     | will attempt to kill all subprocesses of pid=3414456
[2025-10-14 04:43:27] 2025-10-14 02:40:50,712 | INFO     | process IDs to be killed: [3414456] (in reverse order)
[2025-10-14 04:43:27] 2025-10-14 02:40:50,828 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 04:43:27] 2025-10-14 02:40:50,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 04:43:27] 2025-10-14 02:40:50,842 | INFO     | did not find any defunct processes belonging to 3414456
[2025-10-14 04:43:27] 2025-10-14 02:40:50,855 | INFO     | did not find any defunct processes belonging to 3414456
[2025-10-14 04:43:27] 2025-10-14 02:40:50,855 | INFO     | ready for new job
[2025-10-14 04:43:27] 2025-10-14 02:40:50,855 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 04:43:27] 2025-10-14 02:40:50,858 | INFO     | ***************************************
[2025-10-14 04:43:27] 2025-10-14 02:40:50,858 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 04:43:27] 2025-10-14 02:40:50,858 | INFO     | ***************************************
[2025-10-14 04:43:27] 2025-10-14 02:40:50,858 | INFO     | 
[2025-10-14 04:43:27] 2025-10-14 02:40:50,862 | INFO     | architecture information:
[2025-10-14 04:43:27] 2025-10-14 02:40:50,862 | INFO     | executing command: cat /etc/os-release
[2025-10-14 04:43:27] 2025-10-14 02:40:50,877 | INFO     | cat /etc/os-release:
[2025-10-14 04:43:27] NAME="CentOS Linux"
[2025-10-14 04:43:27] VERSION="7 (Core)"
[2025-10-14 04:43:27] ID="centos"
[2025-10-14 04:43:27] ID_LIKE="rhel fedora"
[2025-10-14 04:43:27] VERSION_ID="7"
[2025-10-14 04:43:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 04:43:27] ANSI_COLOR="0;31"
[2025-10-14 04:43:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 04:43:27] HOME_URL="https://www.centos.org/"
[2025-10-14 04:43:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 04:43:27] 
[2025-10-14 04:43:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 04:43:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 04:43:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 04:43:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 04:43:27] 
[2025-10-14 04:43:27] 2025-10-14 02:40:50,877 | INFO     | ***************************************
[2025-10-14 04:43:27] 2025-10-14 02:40:51,380 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-14 04:43:27] 2025-10-14 02:40:51,396 | INFO     | sufficient remaining disk space (698765803520 B)
[2025-10-14 04:43:27] 2025-10-14 02:40:51,396 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 04:43:27] 2025-10-14 02:40:51,396 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 04:43:27] 2025-10-14 02:40:51,396 | INFO     | update_server=False
[2025-10-14 04:43:27] 2025-10-14 02:40:51,396 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 04:43:27] 2025-10-14 02:40:51,397 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 04:43:27] 2025-10-14 02:40:51,397 | INFO     | aborting loop
[2025-10-14 04:43:27] 2025-10-14 02:40:51,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 04:43:27] 2025-10-14 02:40:51,641 | INFO     | all job control threads have been joined
[2025-10-14 04:43:27] 2025-10-14 02:40:52,034 | INFO     | all data control threads have been joined
[2025-10-14 04:43:27] 2025-10-14 02:40:52,401 | INFO     | [job] retrieve thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:52,402 | INFO     | [job] job monitor thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:52,510 | INFO     | [payload] validate_post thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:52,607 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:52,620 | INFO     | all payload control threads have been joined
[2025-10-14 04:43:27] 2025-10-14 02:40:52,646 | INFO     | [job] control thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:52,661 | INFO     | [data] copytool_in thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:52,724 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:53,040 | INFO     | [data] control thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:53,191 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:53,195 | INFO     | [payload] failed_post thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:53,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 04:43:27] 2025-10-14 02:40:53,402 | INFO     | [data] copytool_out thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:53,623 | INFO     | [payload] control thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:53,721 | INFO     | [job] validate thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:54,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 04:43:27] 2025-10-14 02:40:55,310 | INFO     | [job] queue monitor thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:57,215 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:40:57,773 [wrapper] supervise_pilot (15 min periods counter: 13)
[2025-10-14 04:43:27] 2025-10-14 02:41:02,277 | INFO     | job.realtimelogging is not enabled
[2025-10-14 04:43:27] 2025-10-14 02:41:03,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 04:43:27] 2025-10-14 02:41:17,136 | INFO     | [monitor] cgroup control has ended
[2025-10-14 04:43:27] 2025-10-14 02:41:18,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23193808557888)>', '<ExcThread(monitor, started 23193569949440)>']
[2025-10-14 04:43:27] 2025-10-14 02:41:21,697 | INFO     | PID=3386106 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 04:43:27] 2025-10-14 02:41:21,697 | INFO     | .. there are 7 such processes running
[2025-10-14 04:43:27] 2025-10-14 02:41:21,698 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 04:43:27] 2025-10-14 02:41:21,698 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 04:43:27] 2025-10-14 02:41:21,698 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 04:43:27] 2025-10-14 02:41:21,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 04:43:27] 2025-10-14 02:41:21,698 | INFO     | [monitor] control thread has ended
[2025-10-14 04:43:27] 2025-10-14 02:41:23,162 | INFO     | all workflow threads have been joined
[2025-10-14 04:43:27] 2025-10-14 02:41:23,162 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 04:43:27] 2025-10-14 02:41:23,163 | INFO     | traces error code: 0
[2025-10-14 04:43:27] 2025-10-14 02:41:23,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 04:43:27] 2025-10-14 02:41:23,353 [wrapper] ==== pilot stdout END ====
[2025-10-14 04:43:27] 2025-10-14 02:41:23,356 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 04:43:27] 2025-10-14 02:41:23,361 [wrapper] pilotpid: 3386106
[2025-10-14 04:43:27] 2025-10-14 02:41:23,363 [wrapper] Pilot exit status: 0
[2025-10-14 04:43:27] 2025-10-14 02:41:23,374 [wrapper] pandaids: 6838454857
[2025-10-14 04:43:27] 2025-10-14 02:41:23,447 [wrapper] cleanup supervisor_pilot 3652029 3386107
[2025-10-14 04:43:27] 2025-10-14 02:41:23,450 [wrapper] Test setup, not cleaning
[2025-10-14 04:43:27] 2025-10-14 02:41:23,452 [wrapper] apfmon messages muted
[2025-10-14 04:43:27] 2025-10-14 02:41:23,455 [wrapper] ==== wrapper stdout END ====
[2025-10-14 04:43:27] 2025-10-14 02:41:23,457 [wrapper] ==== wrapper stderr END ====
[2025-10-14 04:43:27]  *** Error codes and diagnostics ***
[2025-10-14 04:43:27]     "exeErrorCode": 0,
[2025-10-14 04:43:27]     "exeErrorDiag": "",
[2025-10-14 04:43:27]     "pilotErrorCode": 0,
[2025-10-14 04:43:27]     "pilotErrorDiag": "",
[2025-10-14 04:43:27]  *** Listing of results directory ***
[2025-10-14 04:43:27] total 411984
[2025-10-14 04:43:27] -rw-r--r-- 1 boinc boinc    557409 Oct 11 16:01 pilot3.tar.gz
[2025-10-14 04:43:27] -rw-r--r-- 1 boinc boinc      5112 Oct 11 16:50 queuedata.json
[2025-10-14 04:43:27] -rwx------ 1 boinc boinc     36292 Oct 11 16:50 runpilot2-wrapper.sh
[2025-10-14 04:43:27] -rw-r--r-- 1 boinc boinc       100 Oct 14 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 04:43:27] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 01:40 run_atlas
[2025-10-14 04:43:27] -rw-r--r-- 1 boinc boinc       105 Oct 14 01:40 job.xml
[2025-10-14 04:43:27] -rw-r--r-- 1 boinc boinc      6634 Oct 14 01:40 init_data.xml
[2025-10-14 04:43:27] -rw-r--r-- 2 boinc boinc 219581804 Oct 14 01:40 EVNT.46676267._002403.pool.root.1
[2025-10-14 04:43:27] drwxrwx--x 2 boinc boinc      4096 Oct 14 01:40 shared
[2025-10-14 04:43:27] -rw-r--r-- 2 boinc boinc    569681 Oct 14 01:40 input.tar.gz
[2025-10-14 04:43:27] -rw-r--r-- 2 boinc boinc     15120 Oct 14 01:40 start_atlas.sh
[2025-10-14 04:43:27] -rw-r--r-- 1 boinc boinc         0 Oct 14 01:40 boinc_lockfile
[2025-10-14 04:43:27] -rw-r--r-- 1 boinc boinc      2550 Oct 14 01:40 pandaJob.out
[2025-10-14 04:43:27] -rw------- 1 boinc boinc    972799 Oct 14 01:40 agis_schedconf.cvmfs.json
[2025-10-14 04:43:27] -rw------- 1 boinc boinc   1560580 Oct 14 01:40 agis_ddmendpoints.agis.ALL.json
[2025-10-14 04:43:27] drwx------ 5 boinc boinc      4096 Oct 14 01:40 pilot3
[2025-10-14 04:43:27] -rw------- 1 boinc boinc 194590322 Oct 14 04:40 HITS.46676269._059543.pool.root.1
[2025-10-14 04:43:27] -rw-r--r-- 1 boinc boinc       528 Oct 14 04:40 boinc_task_state.xml
[2025-10-14 04:43:27] -rw------- 1 boinc boinc      1029 Oct 14 04:40 memory_monitor_summary.json
[2025-10-14 04:43:27] -rw------- 1 boinc boinc    364827 Oct 14 04:40 log.46676269._059543.job.log.tgz.1
[2025-10-14 04:43:27] -rw------- 1 boinc boinc      7829 Oct 14 04:40 heartbeat.json
[2025-10-14 04:43:27] -rw------- 1 boinc boinc        95 Oct 14 04:41 pilot_heartbeat.json
[2025-10-14 04:43:27] -rw------- 1 boinc boinc      4905 Oct 14 04:41 pilotlog.txt
[2025-10-14 04:43:27] -rw------- 1 boinc boinc   1532845 Oct 14 04:41 log.46676269._059543.job.log.1
[2025-10-14 04:43:27] -rw------- 1 boinc boinc       357 Oct 14 04:41 output.list
[2025-10-14 04:43:27] -rw-r--r-- 1 boinc boinc       620 Oct 14 04:41 runtime_log
[2025-10-14 04:43:27] -rw------- 1 boinc boinc   1914880 Oct 14 04:41 result.tar.gz
[2025-10-14 04:43:27] -rw-r--r-- 1 boinc boinc      9070 Oct 14 04:41 runtime_log.err
[2025-10-14 04:43:27] -rw------- 1 boinc boinc       665 Oct 14 04:41 HPBODmx6pR8n9Rq4apOajLDm4fhM0noT9bVof3QYDme5RMDm0NMa4n.diag
[2025-10-14 04:43:27] -rw-r--r-- 1 boinc boinc        26 Oct 14 04:43 wrapper_checkpoint.txt
[2025-10-14 04:43:27] -rw-r--r-- 1 boinc boinc      8192 Oct 14 04:43 boinc_mmap_file
[2025-10-14 04:43:27] -rw-r--r-- 1 boinc boinc     20654 Oct 14 04:43 stderr.txt
[2025-10-14 04:43:27] HITS file was successfully produced:
[2025-10-14 04:43:27] -rw------- 1 boinc boinc 194590322 Oct 14 04:40 shared/HITS.pool.root.1
[2025-10-14 04:43:27]  *** Contents of shared directory: ***
[2025-10-14 04:43:27] total 406924
[2025-10-14 04:43:27] -rw-r--r-- 2 boinc boinc 219581804 Oct 14 01:40 ATLAS.root_0
[2025-10-14 04:43:27] -rw-r--r-- 2 boinc boinc    569681 Oct 14 01:40 input.tar.gz
[2025-10-14 04:43:27] -rw-r--r-- 2 boinc boinc     15120 Oct 14 01:40 start_atlas.sh
[2025-10-14 04:43:27] -rw------- 1 boinc boinc 194590322 Oct 14 04:40 HITS.pool.root.1
[2025-10-14 04:43:27] -rw------- 1 boinc boinc   1914880 Oct 14 04:41 result.tar.gz
04:43:29 (3370929): run_atlas exited; CPU time 42034.565228
04:43:29 (3370929): called boinc_finish(0)

</stderr_txt>
]]>

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