Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:52:43 (2857457): wrapper (7.7.26015): starting
15:52:43 (2857457): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 15:52:43] Arguments: --nthreads 8
[2025-10-11 15:52:43] Threads: 8
[2025-10-11 15:52:43] Checking for CVMFS
[2025-10-11 15:52:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 15:52:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 15:52:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 15:52:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 15:52:43] 2.13.1.0 4140 3242 72460 151594 0 188 34078756 39288832 3664 16776704 0 11205472 99.997 109887 33451 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 15:52:43] CVMFS is ok
[2025-10-11 15:52:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 15:52:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 15:52:43] Further information can be found at the LHC@home message board.
[2025-10-11 15:52:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 15:52:43] Checking for apptainer binary...
[2025-10-11 15:52:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 15:52:43] Running /usr/bin/apptainer --version
[2025-10-11 15:52:43] apptainer version 1.4.3-1.el9
[2025-10-11 15:52:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 15:52:43] c-210-16.aglt2.org
[2025-10-11 15:52:43] apptainer works
[2025-10-11 15:52:43] Set ATHENA_PROC_NUMBER=8
[2025-10-11 15:52:43] Set ATHENA_CORE_NUMBER=8
[2025-10-11 15:52:43] Starting ATLAS job with PandaID=6838634815
[2025-10-11 15:52:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:36:09]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:36:09] 2025-10-11 21:35:03,295 | INFO     | time since job start (6129s) is within the limit (172800.0s)
[2025-10-11 17:36:09] 2025-10-11 21:35:04,364 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 17:36:09] 2025-10-11 21:35:04,378 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2700.02215
[2025-10-11 17:36:09] 2025-10-11 21:35:04,386 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6838634815/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:36:09] 2025-10-11 21:35:04,387 | INFO     | extracted standard info from prmon json
[2025-10-11 17:36:09] 2025-10-11 21:35:04,387 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:36:09] 2025-10-11 21:35:04,387 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:36:09] 2025-10-11 21:35:04,388 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:36:09] 2025-10-11 21:35:04,388 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:36:09] 2025-10-11 21:35:04,390 | INFO     | fitting pss+swap vs Time
[2025-10-11 17:36:09] 2025-10-11 21:35:04,391 | INFO     | sum of square deviations: 310052325.0
[2025-10-11 17:36:09] 2025-10-11 21:35:04,391 | INFO     | sum of deviations: 11950234158.0
[2025-10-11 17:36:09] 2025-10-11 21:35:04,392 | INFO     | mean x: 1760215417.5
[2025-10-11 17:36:09] 2025-10-11 21:35:04,392 | INFO     | mean y: 2476230.76
[2025-10-11 17:36:09] 2025-10-11 21:35:04,392 | INFO     | -- intersect: -67840867332.77151
[2025-10-11 17:36:09] 2025-10-11 21:35:04,392 | INFO     | intersect: -67840867332.77151
[2025-10-11 17:36:09] 2025-10-11 21:35:04,392 | INFO     | chi2: 1.4165766437806082
[2025-10-11 17:36:09] 2025-10-11 21:35:04,393 | INFO     | sum of square deviations: 265828240.0
[2025-10-11 17:36:09] 2025-10-11 21:35:04,393 | INFO     | sum of deviations: 11331227263.999998
[2025-10-11 17:36:09] 2025-10-11 21:35:04,394 | INFO     | mean x: 1760215265.0
[2025-10-11 17:36:09] 2025-10-11 21:35:04,394 | INFO     | mean y: 2474093.947368421
[2025-10-11 17:36:09] 2025-10-11 21:35:04,394 | INFO     | -- intersect: -75028678357.26317
[2025-10-11 17:36:09] 2025-10-11 21:35:04,394 | INFO     | intersect: -75028678357.26317
[2025-10-11 17:36:09] 2025-10-11 21:35:04,394 | INFO     | chi2: 1.4197225547799095
[2025-10-11 17:36:09] 2025-10-11 21:35:04,395 | INFO     | current chi2=1.4197225547799095 (change=-0.22207841793193536 %)
[2025-10-11 17:36:09] 2025-10-11 21:35:04,395 | INFO     | right removable region: 94
[2025-10-11 17:36:09] 2025-10-11 21:35:04,395 | INFO     | sum of square deviations: 265828240.0
[2025-10-11 17:36:09] 2025-10-11 21:35:04,396 | INFO     | sum of deviations: -2906304312.9999995
[2025-10-11 17:36:09] 2025-10-11 21:35:04,396 | INFO     | mean x: 1760215570.0
[2025-10-11 17:36:09] 2025-10-11 21:35:04,396 | INFO     | mean y: 2526364.852631579
[2025-10-11 17:36:09] 2025-10-11 21:35:04,396 | INFO     | -- intersect: 19246990771.27067
[2025-10-11 17:36:09] 2025-10-11 21:35:04,397 | INFO     | intersect: 19246990771.27067
[2025-10-11 17:36:09] 2025-10-11 21:35:04,397 | INFO     | chi2: 0.013553535910579338
[2025-10-11 17:36:09] 2025-10-11 21:35:04,397 | INFO     | current chi2=0.013553535910579338 (change=99.04321901888716 %)
[2025-10-11 17:36:09] 2025-10-11 21:35:04,397 | INFO     | sum of square deviations: 226022842.5
[2025-10-11 17:36:09] 2025-10-11 21:35:04,398 | INFO     | sum of deviations: -2160801993.5000005
[2025-10-11 17:36:09] 2025-10-11 21:35:04,398 | INFO     | mean x: 1760215722.5
[2025-10-11 17:36:09] 2025-10-11 21:35:04,398 | INFO     | mean y: 2523475.322222222
[2025-10-11 17:36:09] 2025-10-11 21:35:04,399 | INFO     | -- intersect: 16830369723.50859
[2025-10-11 17:36:09] 2025-10-11 21:35:04,399 | INFO     | intersect: 16830369723.50859
[2025-10-11 17:36:09] 2025-10-11 21:35:04,399 | INFO     | chi2: 0.012794717378243588
[2025-10-11 17:36:09] 2025-10-11 21:35:04,399 | INFO     | current chi2=0.012794717378243588 (change=5.598675779826923 %)
[2025-10-11 17:36:09] 2025-10-11 21:35:04,400 | INFO     | left removable region: 20
[2025-10-11 17:36:09] 2025-10-11 21:35:04,400 | INFO     | sum of square deviations: 125630262.5
[2025-10-11 17:36:09] 2025-10-11 21:35:04,400 | INFO     | sum of deviations: 343270363.0
[2025-10-11 17:36:09] 2025-10-11 21:35:04,401 | INFO     | mean x: 1760215844.5
[2025-10-11 17:36:09] 2025-10-11 21:35:04,401 | INFO     | mean y: 2511227.6486486485
[2025-10-11 17:36:09] 2025-10-11 21:35:04,401 | INFO     | -- intersect: -4807077798.720428
[2025-10-11 17:36:09] 2025-10-11 21:35:04,401 | INFO     | intersect: -4807077798.720428
[2025-10-11 17:36:09] 2025-10-11 21:35:04,401 | INFO     | chi2: 8.237136999541298e-05
[2025-10-11 17:36:09] 2025-10-11 21:35:04,402 | INFO     | -- intersect: -4807077798.720428
[2025-10-11 17:36:09] 2025-10-11 21:35:04,402 | INFO     | current memory leak: 2.73 B/s (using 74 data points, chi2=0.00)
[2025-10-11 17:36:09] 2025-10-11 21:35:04,402 | INFO     | could have reported an average CPU frequency of 2620 MHz (7 samples)
[2025-10-11 17:36:09] 2025-10-11 21:35:04,402 | INFO     | ..............................
[2025-10-11 17:36:09] 2025-10-11 21:35:04,403 | INFO     | . Timing measurements:
[2025-10-11 17:36:09] 2025-10-11 21:35:04,403 | INFO     | . get job = 0 s
[2025-10-11 17:36:09] 2025-10-11 21:35:04,403 | INFO     | . initial setup = 2 s
[2025-10-11 17:36:09] 2025-10-11 21:35:04,403 | INFO     | . payload setup = 5 s
[2025-10-11 17:36:09] 2025-10-11 21:35:04,403 | INFO     | . stage-in = 0 s
[2025-10-11 17:36:09] 2025-10-11 21:35:04,403 | INFO     | . payload execution = 6099 s
[2025-10-11 17:36:09] 2025-10-11 21:35:04,404 | INFO     | . stage-out = 0 s
[2025-10-11 17:36:09] 2025-10-11 21:35:04,404 | INFO     | . log creation = 0 s
[2025-10-11 17:36:09] 2025-10-11 21:35:04,404 | INFO     | ..............................
[2025-10-11 17:36:09] 2025-10-11 21:35:04,527 | INFO     | 
[2025-10-11 17:36:09] 2025-10-11 21:35:04,527 | INFO     | job summary report
[2025-10-11 17:36:09] 2025-10-11 21:35:04,527 | INFO     | --------------------------------------------------
[2025-10-11 17:36:09] 2025-10-11 21:35:04,528 | INFO     | PanDA job id: 6838634815
[2025-10-11 17:36:09] 2025-10-11 21:35:04,528 | INFO     | task id: 46676269
[2025-10-11 17:36:09] 2025-10-11 21:35:04,528 | INFO     | errors: (none)
[2025-10-11 17:36:09] 2025-10-11 21:35:04,528 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:36:09] 2025-10-11 21:35:04,528 | INFO     | pilot state: finished 
[2025-10-11 17:36:09] 2025-10-11 21:35:04,528 | INFO     | transexitcode: 0
[2025-10-11 17:36:09] 2025-10-11 21:35:04,529 | INFO     | exeerrorcode: 0
[2025-10-11 17:36:09] 2025-10-11 21:35:04,529 | INFO     | exeerrordiag: 
[2025-10-11 17:36:09] 2025-10-11 21:35:04,529 | INFO     | exitcode: 0
[2025-10-11 17:36:09] 2025-10-11 21:35:04,529 | INFO     | exitmsg: OK
[2025-10-11 17:36:09] 2025-10-11 21:35:04,529 | INFO     | cpuconsumptiontime: 45235 s
[2025-10-11 17:36:09] 2025-10-11 21:35:04,529 | INFO     | nevents: 400
[2025-10-11 17:36:09] 2025-10-11 21:35:04,529 | INFO     | neventsw: 0
[2025-10-11 17:36:09] 2025-10-11 21:35:04,530 | INFO     | pid: 2867778
[2025-10-11 17:36:09] 2025-10-11 21:35:04,530 | INFO     | pgrp: 2867778
[2025-10-11 17:36:09] 2025-10-11 21:35:04,530 | INFO     | corecount: 8
[2025-10-11 17:36:09] 2025-10-11 21:35:04,530 | INFO     | event service: False
[2025-10-11 17:36:09] 2025-10-11 21:35:04,530 | INFO     | sizes: {0: 2348742, 1: 2348884, 4: 2349146, 11: 2349174, 6107: 2375996, 6108: 2384994, 6111: 2385178, 6115: 2385372}
[2025-10-11 17:36:09] 2025-10-11 21:35:04,531 | INFO     | --------------------------------------------------
[2025-10-11 17:36:09] 2025-10-11 21:35:04,531 | INFO     | 
[2025-10-11 17:36:09] 2025-10-11 21:35:04,531 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-11 17:36:09] 2025-10-11 21:35:04,549 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,549 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,549 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,549 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,550 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,550 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,550 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,550 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,551 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,551 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,552 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,552 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:36:09] 2025-10-11 21:35:04,553 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,553 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:36:09] 2025-10-11 21:35:04,553 | INFO     | job 6838634815 has completed (purged errors)
[2025-10-11 17:36:09] 2025-10-11 21:35:04,553 | INFO     | overall cleanup function is called
[2025-10-11 17:36:09] 2025-10-11 21:35:04,707 | INFO     | PID=2861162 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 17:36:09] 2025-10-11 21:35:04,708 | INFO     | .. there are 5 such processes running
[2025-10-11 17:36:09] 2025-10-11 21:35:05,562 | INFO     | --- collectZombieJob: --- 10, [2867778]
[2025-10-11 17:36:09] 2025-10-11 21:35:05,563 | INFO     | zombie collector waiting for pid 2867778
[2025-10-11 17:36:09] 2025-10-11 21:35:05,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:36:09] 2025-10-11 21:35:05,563 | INFO     | collected zombie processes
[2025-10-11 17:36:09] 2025-10-11 21:35:05,563 | INFO     | will attempt to kill all subprocesses of pid=2867778
[2025-10-11 17:36:09] 2025-10-11 21:35:05,775 | INFO     | process IDs to be killed: [2867778] (in reverse order)
[2025-10-11 17:36:09] 2025-10-11 21:35:05,838 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:36:09] 2025-10-11 21:35:05,839 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:36:09] 2025-10-11 21:35:05,845 | INFO     | did not find any defunct processes belonging to 2867778
[2025-10-11 17:36:09] 2025-10-11 21:35:05,850 | INFO     | did not find any defunct processes belonging to 2867778
[2025-10-11 17:36:09] 2025-10-11 21:35:05,850 | INFO     | ready for new job
[2025-10-11 17:36:09] 2025-10-11 21:35:05,850 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:36:09] 2025-10-11 21:35:05,852 | INFO     | ***************************************
[2025-10-11 17:36:09] 2025-10-11 21:35:05,852 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:36:09] 2025-10-11 21:35:05,852 | INFO     | ***************************************
[2025-10-11 17:36:09] 2025-10-11 21:35:05,852 | INFO     | 
[2025-10-11 17:36:09] 2025-10-11 21:35:05,854 | INFO     | architecture information:
[2025-10-11 17:36:09] 2025-10-11 21:35:05,854 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:36:09] 2025-10-11 21:35:05,866 | INFO     | cat /etc/os-release:
[2025-10-11 17:36:09] NAME="CentOS Linux"
[2025-10-11 17:36:09] VERSION="7 (Core)"
[2025-10-11 17:36:09] ID="centos"
[2025-10-11 17:36:09] ID_LIKE="rhel fedora"
[2025-10-11 17:36:09] VERSION_ID="7"
[2025-10-11 17:36:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:36:09] ANSI_COLOR="0;31"
[2025-10-11 17:36:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:36:09] HOME_URL="https://www.centos.org/"
[2025-10-11 17:36:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:36:09] 
[2025-10-11 17:36:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:36:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:36:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:36:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:36:09] 
[2025-10-11 17:36:09] 2025-10-11 21:35:05,866 | INFO     | ***************************************
[2025-10-11 17:36:09] 2025-10-11 21:35:06,369 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-11 17:36:09] 2025-10-11 21:35:06,382 | INFO     | sufficient remaining disk space (51614056448 B)
[2025-10-11 17:36:09] 2025-10-11 21:35:06,383 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:36:09] 2025-10-11 21:35:06,383 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:36:09] 2025-10-11 21:35:06,383 | INFO     | update_server=False
[2025-10-11 17:36:09] 2025-10-11 21:35:06,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:36:09] 2025-10-11 21:35:06,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:36:09] 2025-10-11 21:35:06,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:36:09] 2025-10-11 21:35:06,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:36:09] 2025-10-11 21:35:06,384 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:36:09] 2025-10-11 21:35:06,385 | INFO     | aborting loop
[2025-10-11 17:36:09] 2025-10-11 21:35:06,728 | INFO     | all data control threads have been joined
[2025-10-11 17:36:09] 2025-10-11 21:35:07,241 | INFO     | all payload control threads have been joined
[2025-10-11 17:36:09] 2025-10-11 21:35:07,388 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:07,389 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:07,390 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:07,392 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:07,434 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:07,668 | INFO     | all job control threads have been joined
[2025-10-11 17:36:09] 2025-10-11 21:35:07,734 | INFO     | [data] control thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:07,742 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:07,812 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:08,151 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:08,247 | INFO     | [payload] control thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:08,289 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:08,390 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:08,584 | INFO     | [job] validate thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:08,671 | INFO     | [job] control thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:08,792 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:10,390 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:36:09] 2025-10-11 21:35:37,038 | INFO     | PID=2861162 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 17:36:09] 2025-10-11 21:35:37,039 | INFO     | .. there are 5 such processes running
[2025-10-11 17:36:09] 2025-10-11 21:35:37,040 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:36:09] 2025-10-11 21:35:37,040 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:36:09] 2025-10-11 21:35:37,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:36:09] 2025-10-11 21:36:03,465 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:36:09] 2025-10-11 21:36:04,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140694018996032)>', '<ExcThread(monitor, started 140693381043968)>']
[2025-10-11 17:36:09] 2025-10-11 21:36:05,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:36:09] 2025-10-11 21:36:05,181 | INFO     | [monitor] control thread has ended
[2025-10-11 17:36:09] 2025-10-11 21:36:09,390 | INFO     | all workflow threads have been joined
[2025-10-11 17:36:09] 2025-10-11 21:36:09,390 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:36:09] 2025-10-11 21:36:09,390 | INFO     | traces error code: 0
[2025-10-11 17:36:09] 2025-10-11 21:36:09,391 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:36:09] 2025-10-11 21:36:09,501 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:36:09] 2025-10-11 21:36:09,504 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:36:09] 2025-10-11 21:36:09,507 [wrapper] pilotpid: 2861162
[2025-10-11 17:36:09] 2025-10-11 21:36:09,509 [wrapper] Pilot exit status: 0
[2025-10-11 17:36:09] 2025-10-11 21:36:09,519 [wrapper] pandaids: 6838634815
[2025-10-11 17:36:09] 2025-10-11 21:36:09,561 [wrapper] cleanup supervisor_pilot 3043615 2861163
[2025-10-11 17:36:09] 2025-10-11 21:36:09,564 [wrapper] Test setup, not cleaning
[2025-10-11 17:36:09] 2025-10-11 21:36:09,567 [wrapper] apfmon messages muted
[2025-10-11 17:36:09] 2025-10-11 21:36:09,569 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:36:09] 2025-10-11 21:36:09,571 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:36:09]  *** Error codes and diagnostics ***
[2025-10-11 17:36:09]     "exeErrorCode": 0,
[2025-10-11 17:36:09]     "exeErrorDiag": "",
[2025-10-11 17:36:09]     "pilotErrorCode": 0,
[2025-10-11 17:36:09]     "pilotErrorDiag": "",
[2025-10-11 17:36:09]  *** Listing of results directory ***
[2025-10-11 17:36:09] total 410588
[2025-10-11 17:36:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 13:33 pilot3.tar.gz
[2025-10-11 17:36:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 13:37 queuedata.json
[2025-10-11 17:36:09] -rwx------. 1 boincer umatlas     36292 Oct 11 13:38 runpilot2-wrapper.sh
[2025-10-11 17:36:09] -rw-r--r--. 1 boincer umatlas       100 Oct 11 15:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:36:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 15:52 run_atlas
[2025-10-11 17:36:09] -rw-r--r--. 1 boincer umatlas       105 Oct 11 15:52 job.xml
[2025-10-11 17:36:09] -rw-r--r--. 2 boincer umatlas 221201731 Oct 11 15:52 EVNT.46676267._002495.pool.root.1
[2025-10-11 17:36:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 15:52 start_atlas.sh
[2025-10-11 17:36:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 15:52 shared
[2025-10-11 17:36:09] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 15:52 input.tar.gz
[2025-10-11 17:36:09] -rw-r--r--. 1 boincer umatlas         0 Oct 11 15:52 boinc_lockfile
[2025-10-11 17:36:09] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 15:52 pandaJob.out
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas    975512 Oct 11 15:52 agis_schedconf.cvmfs.json
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas   1560580 Oct 11 15:52 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:36:09] drwx------. 5 boincer umatlas      4096 Oct 11 15:52 pilot3
[2025-10-11 17:36:09] -rw-r--r--. 1 boincer umatlas      6659 Oct 11 17:28 init_data.xml
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas 192836931 Oct 11 17:34 HITS.46676269._062110.pool.root.1
[2025-10-11 17:36:09] -rw-r--r--. 1 boincer umatlas       529 Oct 11 17:34 boinc_task_state.xml
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas      1034 Oct 11 17:34 memory_monitor_summary.json
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas    350377 Oct 11 17:34 log.46676269._062110.job.log.tgz.1
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas      7811 Oct 11 17:35 heartbeat.json
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas        95 Oct 11 17:35 pilot_heartbeat.json
[2025-10-11 17:36:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 17:36 boinc_mmap_file
[2025-10-11 17:36:09] -rw-r--r--. 1 boincer umatlas        27 Oct 11 17:36 wrapper_checkpoint.txt
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas      4823 Oct 11 17:36 pilotlog.txt
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas    896398 Oct 11 17:36 log.46676269._062110.job.log.1
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas       357 Oct 11 17:36 output.list
[2025-10-11 17:36:09] -rw-r--r--. 1 boincer umatlas       620 Oct 11 17:36 runtime_log
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas   1269760 Oct 11 17:36 result.tar.gz
[2025-10-11 17:36:09] -rw-r--r--. 1 boincer umatlas      8703 Oct 11 17:36 runtime_log.err
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas       652 Oct 11 17:36 jRHLDm2isR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmuKSMDmrhfCln.diag
[2025-10-11 17:36:09] -rw-r--r--. 1 boincer umatlas     21178 Oct 11 17:36 stderr.txt
[2025-10-11 17:36:09] HITS file was successfully produced:
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas 192836931 Oct 11 17:34 shared/HITS.pool.root.1
[2025-10-11 17:36:09]  *** Contents of shared directory: ***
[2025-10-11 17:36:09] total 406164
[2025-10-11 17:36:09] -rw-r--r--. 2 boincer umatlas 221201731 Oct 11 15:52 ATLAS.root_0
[2025-10-11 17:36:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 15:52 start_atlas.sh
[2025-10-11 17:36:09] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 15:52 input.tar.gz
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas 192836931 Oct 11 17:34 HITS.pool.root.1
[2025-10-11 17:36:09] -rw-------. 1 boincer umatlas   1269760 Oct 11 17:36 result.tar.gz
17:36:11 (2857457): run_atlas exited; CPU time 45351.904717
17:36:11 (2857457): called boinc_finish(0)

</stderr_txt>
]]>

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