Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:03:18 (2921432): wrapper (7.7.26015): starting
06:03:18 (2921432): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 06:03:18] Arguments: --nthreads 4
[2025-10-13 06:03:18] Threads: 4
[2025-10-13 06:03:18] Checking for CVMFS
[2025-10-13 06:03:18] No cvmfs_config command found, will try listing directly
[2025-10-13 06:03:18] CVMFS is ok
[2025-10-13 06:03:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:03:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:03:18] Further information can be found at the LHC@home message board.
[2025-10-13 06:03:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:03:18] Checking for apptainer binary...
[2025-10-13 06:03:18] which: no apptainer in ((null))
[2025-10-13 06:03:18] apptainer is not installed, using version from CVMFS
[2025-10-13 06:03:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:03:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-13 06:03:18] apptainer works
[2025-10-13 06:03:18] Set ATHENA_PROC_NUMBER=4
[2025-10-13 06:03:18] Set ATHENA_CORE_NUMBER=4
[2025-10-13 06:03:18] Starting ATLAS job with PandaID=6838000681
[2025-10-13 06:03:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:58:02]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:58:02] 2025-10-13 06:31:17,973 | INFO     | intersect: -37634596323.83902
[2025-10-13 08:58:02] 2025-10-13 06:31:17,973 | INFO     | chi2: 1.383436250151487
[2025-10-13 08:58:02] 2025-10-13 06:31:17,974 | INFO     | sum of square deviations: 850825255.0
[2025-10-13 08:58:02] 2025-10-13 06:31:17,974 | INFO     | sum of deviations: 19437798077.500004
[2025-10-13 08:58:02] 2025-10-13 06:31:17,974 | INFO     | mean x: 1760332485.5
[2025-10-13 08:58:02] 2025-10-13 06:31:17,975 | INFO     | mean y: 2301468.007142857
[2025-10-13 08:58:02] 2025-10-13 06:31:17,975 | INFO     | -- intersect: -40213932360.65689
[2025-10-13 08:58:02] 2025-10-13 06:31:17,975 | INFO     | intersect: -40213932360.65689
[2025-10-13 08:58:02] 2025-10-13 06:31:17,975 | INFO     | chi2: 1.384679926808287
[2025-10-13 08:58:02] 2025-10-13 06:31:17,975 | INFO     | current chi2=1.384679926808287 (change=-0.08989764845787776 %)
[2025-10-13 08:58:02] 2025-10-13 06:31:17,975 | INFO     | right removable region: 139
[2025-10-13 08:58:02] 2025-10-13 06:31:17,975 | INFO     | sum of square deviations: 850825255.0
[2025-10-13 08:58:02] 2025-10-13 06:31:17,976 | INFO     | sum of deviations: 1428009634.0
[2025-10-13 08:58:02] 2025-10-13 06:31:17,976 | INFO     | mean x: 1760332790.5
[2025-10-13 08:58:02] 2025-10-13 06:31:17,976 | INFO     | mean y: 2332491.9285714286
[2025-10-13 08:58:02] 2025-10-13 06:31:17,976 | INFO     | -- intersect: -2952178048.405711
[2025-10-13 08:58:02] 2025-10-13 06:31:17,976 | INFO     | intersect: -2952178048.405711
[2025-10-13 08:58:02] 2025-10-13 06:31:17,977 | INFO     | chi2: 0.002068015637264896
[2025-10-13 08:58:02] 2025-10-13 06:31:17,977 | INFO     | current chi2=0.002068015637264896 (change=99.85051601495634 %)
[2025-10-13 08:58:02] 2025-10-13 06:31:17,977 | INFO     | sum of square deviations: 762879420.0
[2025-10-13 08:58:02] 2025-10-13 06:31:17,978 | INFO     | sum of deviations: 1908176380.0
[2025-10-13 08:58:02] 2025-10-13 06:31:17,978 | INFO     | mean x: 1760332943.0
[2025-10-13 08:58:02] 2025-10-13 06:31:17,978 | INFO     | mean y: 2331650.162962963
[2025-10-13 08:58:02] 2025-10-13 06:31:17,978 | INFO     | -- intersect: -4400757035.554219
[2025-10-13 08:58:02] 2025-10-13 06:31:17,978 | INFO     | intersect: -4400757035.554219
[2025-10-13 08:58:02] 2025-10-13 06:31:17,978 | INFO     | chi2: 0.0010002767266151069
[2025-10-13 08:58:02] 2025-10-13 06:31:17,979 | INFO     | current chi2=0.0010002767266151069 (change=51.63108495939388 %)
[2025-10-13 08:58:02] 2025-10-13 06:31:17,979 | INFO     | sum of square deviations: 681212772.5
[2025-10-13 08:58:02] 2025-10-13 06:31:17,979 | INFO     | sum of deviations: 1700685947.5
[2025-10-13 08:58:02] 2025-10-13 06:31:17,980 | INFO     | mean x: 1760333095.5
[2025-10-13 08:58:02] 2025-10-13 06:31:17,980 | INFO     | mean y: 2332049.423076923
[2025-10-13 08:58:02] 2025-10-13 06:31:17,980 | INFO     | -- intersect: -4392438394.250637
[2025-10-13 08:58:02] 2025-10-13 06:31:17,980 | INFO     | intersect: -4392438394.250637
[2025-10-13 08:58:02] 2025-10-13 06:31:17,980 | INFO     | chi2: 0.00046939334497449246
[2025-10-13 08:58:02] 2025-10-13 06:31:17,980 | INFO     | current chi2=0.00046939334497449246 (change=53.07365127219352 %)
[2025-10-13 08:58:02] 2025-10-13 06:31:17,980 | INFO     | sum of square deviations: 605592750.0
[2025-10-13 08:58:02] 2025-10-13 06:31:17,981 | INFO     | sum of deviations: 1355525224.9999998
[2025-10-13 08:58:02] 2025-10-13 06:31:17,981 | INFO     | mean x: 1760333248.0
[2025-10-13 08:58:02] 2025-10-13 06:31:17,981 | INFO     | mean y: 2332745.832
[2025-10-13 08:58:02] 2025-10-13 06:31:17,981 | INFO     | -- intersect: -3937899567.170724
[2025-10-13 08:58:02] 2025-10-13 06:31:17,981 | INFO     | intersect: -3937899567.170724
[2025-10-13 08:58:02] 2025-10-13 06:31:17,982 | INFO     | chi2: 0.0004019986491286334
[2025-10-13 08:58:02] 2025-10-13 06:31:17,982 | INFO     | current chi2=0.0004019986491286334 (change=14.3578294339732 %)
[2025-10-13 08:58:02] 2025-10-13 06:31:17,982 | INFO     | left removable region: 40
[2025-10-13 08:58:02] 2025-10-13 06:31:17,982 | INFO     | sum of square deviations: 300842850.0
[2025-10-13 08:58:02] 2025-10-13 06:31:17,983 | INFO     | sum of deviations: 365819989.0
[2025-10-13 08:58:02] 2025-10-13 06:31:17,983 | INFO     | mean x: 1760333675.0
[2025-10-13 08:58:02] 2025-10-13 06:31:17,983 | INFO     | mean y: 2334890.717171717
[2025-10-13 08:58:02] 2025-10-13 06:31:17,983 | INFO     | -- intersect: -2138202089.3866587
[2025-10-13 08:58:02] 2025-10-13 06:31:17,983 | INFO     | intersect: -2138202089.3866587
[2025-10-13 08:58:02] 2025-10-13 06:31:17,983 | INFO     | chi2: 0.00020078368036805194
[2025-10-13 08:58:02] 2025-10-13 06:31:17,983 | INFO     | -- intersect: -2138202089.3866587
[2025-10-13 08:58:02] 2025-10-13 06:31:17,983 | INFO     | current memory leak: 1.22 B/s (using 99 data points, chi2=0.00)
[2025-10-13 08:58:02] 2025-10-13 06:31:17,984 | INFO     | could have reported an average CPU frequency of 2710 MHz (8 samples)
[2025-10-13 08:58:02] 2025-10-13 06:31:17,984 | INFO     | ..............................
[2025-10-13 08:58:02] 2025-10-13 06:31:17,984 | INFO     | . Timing measurements:
[2025-10-13 08:58:02] 2025-10-13 06:31:17,984 | INFO     | . get job = 0 s
[2025-10-13 08:58:02] 2025-10-13 06:31:17,984 | INFO     | . initial setup = 1 s
[2025-10-13 08:58:02] 2025-10-13 06:31:17,984 | INFO     | . payload setup = 8 s
[2025-10-13 08:58:02] 2025-10-13 06:31:17,984 | INFO     | . stage-in = 0 s
[2025-10-13 08:58:02] 2025-10-13 06:31:17,984 | INFO     | . payload execution = 8821 s
[2025-10-13 08:58:02] 2025-10-13 06:31:17,984 | INFO     | . stage-out = 0 s
[2025-10-13 08:58:02] 2025-10-13 06:31:17,985 | INFO     | . log creation = 0 s
[2025-10-13 08:58:02] 2025-10-13 06:31:17,985 | INFO     | ..............................
[2025-10-13 08:58:02] 2025-10-13 06:31:18,078 | INFO     | 
[2025-10-13 08:58:02] 2025-10-13 06:31:18,079 | INFO     | job summary report
[2025-10-13 08:58:02] 2025-10-13 06:31:18,079 | INFO     | --------------------------------------------------
[2025-10-13 08:58:02] 2025-10-13 06:31:18,079 | INFO     | PanDA job id: 6838000681
[2025-10-13 08:58:02] 2025-10-13 06:31:18,079 | INFO     | task id: 46676269
[2025-10-13 08:58:02] 2025-10-13 06:31:18,079 | INFO     | errors: (none)
[2025-10-13 08:58:02] 2025-10-13 06:31:18,079 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:58:02] 2025-10-13 06:31:18,079 | INFO     | pilot state: finished 
[2025-10-13 08:58:02] 2025-10-13 06:31:18,079 | INFO     | transexitcode: 0
[2025-10-13 08:58:02] 2025-10-13 06:31:18,079 | INFO     | exeerrorcode: 0
[2025-10-13 08:58:02] 2025-10-13 06:31:18,080 | INFO     | exeerrordiag: 
[2025-10-13 08:58:02] 2025-10-13 06:31:18,080 | INFO     | exitcode: 0
[2025-10-13 08:58:02] 2025-10-13 06:31:18,080 | INFO     | exitmsg: OK
[2025-10-13 08:58:02] 2025-10-13 06:31:18,080 | INFO     | cpuconsumptiontime: 33728 s
[2025-10-13 08:58:02] 2025-10-13 06:31:18,080 | INFO     | nevents: 400
[2025-10-13 08:58:02] 2025-10-13 06:31:18,080 | INFO     | neventsw: 0
[2025-10-13 08:58:02] 2025-10-13 06:31:18,080 | INFO     | pid: 2947074
[2025-10-13 08:58:02] 2025-10-13 06:31:18,080 | INFO     | pgrp: 2947074
[2025-10-13 08:58:02] 2025-10-13 06:31:18,080 | INFO     | corecount: 4
[2025-10-13 08:58:02] 2025-10-13 06:31:18,080 | INFO     | event service: False
[2025-10-13 08:58:02] 2025-10-13 06:31:18,080 | INFO     | sizes: {0: 2348869, 7: 2349131, 11: 2349159, 8833: 2377663, 8835: 2386685, 8839: 2386741, 8847: 2387063}
[2025-10-13 08:58:02] 2025-10-13 06:31:18,080 | INFO     | --------------------------------------------------
[2025-10-13 08:58:02] 2025-10-13 06:31:18,080 | INFO     | 
[2025-10-13 08:58:02] 2025-10-13 06:31:18,081 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-10-13 08:58:02] 2025-10-13 06:31:18,113 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,114 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,114 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,114 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,115 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,115 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:58:02] 2025-10-13 06:31:18,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,115 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:58:02] 2025-10-13 06:31:18,116 | INFO     | job 6838000681 has completed (purged errors)
[2025-10-13 08:58:02] 2025-10-13 06:31:18,116 | INFO     | overall cleanup function is called
[2025-10-13 08:58:02] 2025-10-13 06:31:19,125 | INFO     | --- collectZombieJob: --- 10, [2947074]
[2025-10-13 08:58:02] 2025-10-13 06:31:19,125 | INFO     | zombie collector waiting for pid 2947074
[2025-10-13 08:58:02] 2025-10-13 06:31:19,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:58:02] 2025-10-13 06:31:19,126 | INFO     | collected zombie processes
[2025-10-13 08:58:02] 2025-10-13 06:31:19,126 | INFO     | will attempt to kill all subprocesses of pid=2947074
[2025-10-13 08:58:02] 2025-10-13 06:31:19,910 | INFO     | process IDs to be killed: [2947074] (in reverse order)
[2025-10-13 08:58:02] 2025-10-13 06:31:20,151 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:58:02] 2025-10-13 06:31:20,152 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:58:02] 2025-10-13 06:31:20,183 | INFO     | did not find any defunct processes belonging to 2947074
[2025-10-13 08:58:02] 2025-10-13 06:31:20,212 | INFO     | did not find any defunct processes belonging to 2947074
[2025-10-13 08:58:02] 2025-10-13 06:31:20,213 | INFO     | ready for new job
[2025-10-13 08:58:02] 2025-10-13 06:31:20,213 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:58:02] 2025-10-13 06:31:20,215 | INFO     | ***************************************
[2025-10-13 08:58:02] 2025-10-13 06:31:20,215 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:58:02] 2025-10-13 06:31:20,215 | INFO     | ***************************************
[2025-10-13 08:58:02] 2025-10-13 06:31:20,215 | INFO     | 
[2025-10-13 08:58:02] 2025-10-13 06:31:20,224 | INFO     | architecture information:
[2025-10-13 08:58:02] 2025-10-13 06:31:20,224 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:58:02] 2025-10-13 06:31:20,246 | INFO     | cat /etc/os-release:
[2025-10-13 08:58:02] NAME="CentOS Linux"
[2025-10-13 08:58:02] VERSION="7 (Core)"
[2025-10-13 08:58:02] ID="centos"
[2025-10-13 08:58:02] ID_LIKE="rhel fedora"
[2025-10-13 08:58:02] VERSION_ID="7"
[2025-10-13 08:58:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:58:02] ANSI_COLOR="0;31"
[2025-10-13 08:58:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:58:02] HOME_URL="https://www.centos.org/"
[2025-10-13 08:58:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:58:02] 
[2025-10-13 08:58:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:58:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:58:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:58:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:58:02] 
[2025-10-13 08:58:02] 2025-10-13 06:31:20,246 | INFO     | ***************************************
[2025-10-13 08:58:02] 2025-10-13 06:31:20,749 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-10-13 08:58:02] 2025-10-13 06:31:20,773 | INFO     | sufficient remaining disk space (3336395816960 B)
[2025-10-13 08:58:02] 2025-10-13 06:31:20,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:58:02] 2025-10-13 06:31:20,774 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:58:02] 2025-10-13 06:31:20,774 | INFO     | update_server=False
[2025-10-13 08:58:02] 2025-10-13 06:31:20,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:58:02] 2025-10-13 06:31:20,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:58:02] 2025-10-13 06:31:20,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:58:02] 2025-10-13 06:31:20,775 | INFO     | aborting loop
[2025-10-13 08:58:02] 2025-10-13 06:31:20,839 | INFO     | all data control threads have been joined
[2025-10-13 08:58:02] 2025-10-13 06:31:21,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:58:02] 2025-10-13 06:31:21,779 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:21,780 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:21,784 | INFO     | [job] validate thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:21,844 | INFO     | [data] control thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:21,926 | INFO     | all payload control threads have been joined
[2025-10-13 08:58:02] 2025-10-13 06:31:21,960 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:22,146 | INFO     | all job control threads have been joined
[2025-10-13 08:58:02] 2025-10-13 06:31:22,223 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:22,531 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:22,837 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:22,837 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:22,931 | INFO     | [payload] control thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:23,089 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:58:02] 2025-10-13 06:31:23,152 | INFO     | [job] control thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:23,270 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:23,451 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:24,094 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:24,781 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:31,496 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:58:02] 2025-10-13 06:31:32,501 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:58:02] 2025-10-13 06:31:45,648 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:58:02] 2025-10-13 06:31:45,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22592334264128)>', '<ExcThread(monitor, started 22592096274176)>']
[2025-10-13 08:58:02] 2025-10-13 06:31:50,235 | INFO     | PID=2928100 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:58:02] 2025-10-13 06:31:50,238 | INFO     | .. there are 8 such processes running
[2025-10-13 08:58:02] 2025-10-13 06:31:50,239 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:58:02] 2025-10-13 06:31:50,239 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:58:02] 2025-10-13 06:31:50,239 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:58:02] 2025-10-13 06:31:50,239 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:58:02] 2025-10-13 06:31:50,239 | INFO     | [monitor] control thread has ended
[2025-10-13 08:58:02] 2025-10-13 06:31:50,699 | INFO     | all workflow threads have been joined
[2025-10-13 08:58:02] 2025-10-13 06:31:50,699 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:58:02] 2025-10-13 06:31:50,699 | INFO     | traces error code: 0
[2025-10-13 08:58:02] 2025-10-13 06:31:50,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:58:02] 2025-10-13 06:31:50,857 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:58:02] 2025-10-13 06:31:50,861 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:58:02] 2025-10-13 06:31:50,865 [wrapper] pilotpid: 2928100
[2025-10-13 08:58:02] 2025-10-13 06:31:50,871 [wrapper] Pilot exit status: 0
[2025-10-13 08:58:02] 2025-10-13 06:31:50,886 [wrapper] pandaids: 6838000681
[2025-10-13 08:58:02] 2025-10-13 06:31:51,053 [wrapper] cleanup supervisor_pilot 3181550 2928102
[2025-10-13 08:58:02] 2025-10-13 06:31:51,056 [wrapper] Test setup, not cleaning
[2025-10-13 08:58:02] 2025-10-13 06:31:51,059 [wrapper] apfmon messages muted
[2025-10-13 08:58:02] 2025-10-13 06:31:51,062 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:58:02] 2025-10-13 06:31:51,066 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:58:02]  *** Error codes and diagnostics ***
[2025-10-13 08:58:02]     "exeErrorCode": 0,
[2025-10-13 08:58:02]     "exeErrorDiag": "",
[2025-10-13 08:58:02]     "pilotErrorCode": 0,
[2025-10-13 08:58:02]     "pilotErrorDiag": "",
[2025-10-13 08:58:02]  *** Listing of results directory ***
[2025-10-13 08:58:02] total 410112
[2025-10-13 08:58:02] -rw-r--r-- 1 boinc boinc    557409 Oct 11 05:11 pilot3.tar.gz
[2025-10-13 08:58:02] -rwx------ 1 boinc boinc     36292 Oct 11 05:14 runpilot2-wrapper.sh
[2025-10-13 08:58:02] -rw-r--r-- 1 boinc boinc      5112 Oct 11 05:14 queuedata.json
[2025-10-13 08:58:02] -rw-r--r-- 1 boinc boinc       100 Oct 13 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:58:02] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 06:03 run_atlas
[2025-10-13 08:58:02] -rw-r--r-- 1 boinc boinc       105 Oct 13 06:03 job.xml
[2025-10-13 08:58:02] -rw-r--r-- 1 boinc boinc      6688 Oct 13 06:03 init_data.xml
[2025-10-13 08:58:02] -rw-r--r-- 2 boinc boinc 219894124 Oct 13 06:03 EVNT.46676267._002015.pool.root.1
[2025-10-13 08:58:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:03 start_atlas.sh
[2025-10-13 08:58:02] drwxrwx--x 2 boinc boinc      4096 Oct 13 06:03 shared
[2025-10-13 08:58:02] -rw-r--r-- 2 boinc boinc    569676 Oct 13 06:03 input.tar.gz
[2025-10-13 08:58:02] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:03 boinc_lockfile
[2025-10-13 08:58:02] -rw-r--r-- 1 boinc boinc      2550 Oct 13 06:03 pandaJob.out
[2025-10-13 08:58:02] -rw------- 1 boinc boinc    974373 Oct 13 06:03 agis_schedconf.cvmfs.json
[2025-10-13 08:58:02] -rw------- 1 boinc boinc   1560580 Oct 13 06:03 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:58:02] drwx------ 5 boinc boinc      4096 Oct 13 06:03 pilot3
[2025-10-13 08:58:02] -rw------- 1 boinc boinc 192999029 Oct 13 08:30 HITS.46676269._050053.pool.root.1
[2025-10-13 08:58:02] -rw-r--r-- 1 boinc boinc       528 Oct 13 08:30 boinc_task_state.xml
[2025-10-13 08:58:02] -rw------- 1 boinc boinc      1037 Oct 13 08:31 memory_monitor_summary.json
[2025-10-13 08:58:02] -rw------- 1 boinc boinc    329438 Oct 13 08:31 log.46676269._050053.job.log.tgz.1
[2025-10-13 08:58:02] -rw------- 1 boinc boinc      7780 Oct 13 08:31 heartbeat.json
[2025-10-13 08:58:02] -rw------- 1 boinc boinc        95 Oct 13 08:31 pilot_heartbeat.json
[2025-10-13 08:58:02] -rw------- 1 boinc boinc      4907 Oct 13 08:31 pilotlog.txt
[2025-10-13 08:58:02] -rw------- 1 boinc boinc   1249288 Oct 13 08:31 log.46676269._050053.job.log.1
[2025-10-13 08:58:02] -rw------- 1 boinc boinc       357 Oct 13 08:31 output.list
[2025-10-13 08:58:02] -rw-r--r-- 1 boinc boinc       620 Oct 13 08:31 runtime_log
[2025-10-13 08:58:02] -rw------- 1 boinc boinc   1597440 Oct 13 08:31 result.tar.gz
[2025-10-13 08:58:02] -rw-r--r-- 1 boinc boinc      9084 Oct 13 08:31 runtime_log.err
[2025-10-13 08:58:02] -rw------- 1 boinc boinc       662 Oct 13 08:31 UpvLDmsEfR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZ2QMDm1mOgym.diag
[2025-10-13 08:58:02] -rw-r--r-- 1 boinc boinc      8192 Oct 13 08:58 boinc_mmap_file
[2025-10-13 08:58:02] -rw-r--r-- 1 boinc boinc        26 Oct 13 08:58 wrapper_checkpoint.txt
[2025-10-13 08:58:02] -rw-r--r-- 1 boinc boinc     20667 Oct 13 08:58 stderr.txt
[2025-10-13 08:58:02] HITS file was successfully produced:
[2025-10-13 08:58:02] -rw------- 1 boinc boinc 192999029 Oct 13 08:30 shared/HITS.pool.root.1
[2025-10-13 08:58:02]  *** Contents of shared directory: ***
[2025-10-13 08:58:02] total 405364
[2025-10-13 08:58:02] -rw-r--r-- 2 boinc boinc 219894124 Oct 13 06:03 ATLAS.root_0
[2025-10-13 08:58:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:03 start_atlas.sh
[2025-10-13 08:58:02] -rw-r--r-- 2 boinc boinc    569676 Oct 13 06:03 input.tar.gz
[2025-10-13 08:58:02] -rw------- 1 boinc boinc 192999029 Oct 13 08:30 HITS.pool.root.1
[2025-10-13 08:58:02] -rw------- 1 boinc boinc   1597440 Oct 13 08:31 result.tar.gz
08:58:04 (2921432): run_atlas exited; CPU time 34306.559683
08:58:04 (2921432): called boinc_finish(0)

</stderr_txt>
]]>

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