Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:10:08 (2239402): wrapper (7.7.26015): starting
00:10:08 (2239402): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 00:10:08] Arguments: --nthreads 3
[2025-10-13 00:10:08] Threads: 3
[2025-10-13 00:10:08] Checking for CVMFS
[2025-10-13 00:10:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:10:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:10:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:10:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:10:10] 2.9.2.0 2239526 0 29096 151639 4 1 33843666 36864001 0 130560 0 0 0.000 1291 588 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 00:10:10] CVMFS is ok
[2025-10-13 00:10:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:10:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:10:10] Further information can be found at the LHC@home message board.
[2025-10-13 00:10:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:10:10] Checking for apptainer binary...
[2025-10-13 00:10:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:10:10] Running /usr/bin/apptainer --version
[2025-10-13 00:10:10] apptainer version 1.4.1-1.1
[2025-10-13 00:10:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:10:10] atlasA215
[2025-10-13 00:10:10] apptainer works
[2025-10-13 00:10:11] Set ATHENA_PROC_NUMBER=3
[2025-10-13 00:10:11] Set ATHENA_CORE_NUMBER=3
[2025-10-13 00:10:11] Starting ATLAS job with PandaID=6838454039
[2025-10-13 00:10:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:30:31]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:30:31]  protocol_id=None
[2025-10-13 01:30:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 01:30:31]  replicas=None
[2025-10-13 01:30:31]  scope=mc23_13p6TeV
[2025-10-13 01:30:31]  status=None
[2025-10-13 01:30:31]  status_code=0
[2025-10-13 01:30:31]  storage_token=
[2025-10-13 01:30:31]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6838454039/log.46676269._059364.job.log.tgz.1
[2025-10-13 01:30:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/36/log.46676269._059364.job.log.tgz.1
[2025-10-13 01:30:31]  workdir=None
[2025-10-13 01:30:31] ]
[2025-10-13 01:30:31] 2025-10-12 23:29:23,924 | INFO     | transferring file log.46676269._059364.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6838454039/log.46676269._059364.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 01:30:31] 2025-10-12 23:29:23,924 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6838454039/log.46676269._059364.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0593
[2025-10-13 01:30:31] 2025-10-12 23:29:23,937 | INFO     | adding to output.list: log.46676269._059364.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/36/log.46676269._059364.job.log.tg
[2025-10-13 01:30:31] 2025-10-12 23:29:23,938 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 01:30:31] 2025-10-12 23:29:23,938 | INFO     | summary of transferred files:
[2025-10-13 01:30:31] 2025-10-12 23:29:23,938 | INFO     |  -- lfn=log.46676269._059364.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 01:30:31] 2025-10-12 23:29:23,938 | INFO     | stage-out finished correctly
[2025-10-13 01:30:31] 2025-10-12 23:29:23,968 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 01:30:31] 2025-10-12 23:29:24,301 | INFO     | job 6838454039 has state=finished
[2025-10-13 01:30:31] 2025-10-12 23:29:24,302 | INFO     | preparing for final server update for job 6838454039 in state='finished'
[2025-10-13 01:30:31] 2025-10-12 23:29:24,302 | INFO     | this job has now completed (state=finished)
[2025-10-13 01:30:31] 2025-10-12 23:29:24,302 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 01:30:31] 2025-10-12 23:29:24,302 | INFO     | log transfer has been attempted: DONE
[2025-10-13 01:30:31] 2025-10-12 23:29:24,302 | INFO     | job 6838454039 has finished - writing final server update
[2025-10-13 01:30:31] 2025-10-12 23:29:24,302 | INFO     | total number of processed events: 400 (read)
[2025-10-13 01:30:31] 2025-10-12 23:29:24,303 | INFO     | executing command: lscpu
[2025-10-13 01:30:31] 2025-10-12 23:29:24,319 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 01:30:31] 2025-10-12 23:29:25,235 | INFO     | time since job start (4745s) is within the limit (172800.0s)
[2025-10-13 01:30:31] 2025-10-12 23:29:27,241 | INFO     | time since job start (4747s) is within the limit (172800.0s)
[2025-10-13 01:30:31] 2025-10-12 23:29:28,458 | WARNING  | process 2249954 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 01:30:31] 2025-10-12 23:29:28,458 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838454039/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:30:31] 2025-10-12 23:29:28,510 | INFO     | number of running child processes to parent process 2249954: 1
[2025-10-13 01:30:31] 2025-10-12 23:29:28,511 | INFO     | maximum number of monitored processes: 6
[2025-10-13 01:30:31] 2025-10-12 23:29:28,962 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 01:30:31] 2025-10-12 23:29:28,964 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3742.003083333333
[2025-10-13 01:30:31] 2025-10-12 23:29:28,964 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838454039/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:30:31] 2025-10-12 23:29:28,965 | INFO     | extracted standard info from prmon json
[2025-10-13 01:30:31] 2025-10-12 23:29:28,965 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:30:31] 2025-10-12 23:29:28,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:30:31] 2025-10-12 23:29:28,965 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:30:31] 2025-10-12 23:29:28,965 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | sum of square deviations: 110960220.0
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | sum of deviations: 769674271.0
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | mean x: 1760309479.0
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | mean y: 2356150.38028169
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | -- intersect: -12208010005.92073
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | intersect: -12208010005.92073
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | chi2: 0.0031103945814901835
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | -- intersect: -12208010005.92073
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | current memory leak: 6.94 B/s (using 71 data points, chi2=0.00)
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | could have reported an average CPU frequency of 3915 MHz (6 samples)
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | ..............................
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | . Timing measurements:
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | . get job = 0 s
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | . initial setup = 1 s
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | . payload setup = 2 s
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | . stage-in = 0 s
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | . payload execution = 4724 s
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | . stage-out = 0 s
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | . log creation = 0 s
[2025-10-13 01:30:31] 2025-10-12 23:29:28,966 | INFO     | ..............................
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | 
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | job summary report
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | --------------------------------------------------
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | PanDA job id: 6838454039
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | task id: 46676269
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | errors: (none)
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | pilot state: finished 
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | transexitcode: 0
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | exeerrorcode: 0
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | exeerrordiag: 
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | exitcode: 0
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | exitmsg: OK
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | cpuconsumptiontime: 13598 s
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | nevents: 400
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | neventsw: 0
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | pid: 2249954
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | pgrp: 2249954
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | corecount: 3
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | event service: False
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | sizes: {0: 2348859, 2: 2349121, 10: 2349149, 4730: 2375450, 4731: 2384510, 4736: 2384648}
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | --------------------------------------------------
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | 
[2025-10-13 01:30:31] 2025-10-12 23:29:28,998 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | job 6838454039 has completed (purged errors)
[2025-10-13 01:30:31] 2025-10-12 23:29:29,010 | INFO     | overall cleanup function is called
[2025-10-13 01:30:31] 2025-10-12 23:29:30,017 | INFO     | --- collectZombieJob: --- 10, [2249954]
[2025-10-13 01:30:31] 2025-10-12 23:29:30,017 | INFO     | zombie collector waiting for pid 2249954
[2025-10-13 01:30:31] 2025-10-12 23:29:30,017 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:30:31] 2025-10-12 23:29:30,017 | INFO     | collected zombie processes
[2025-10-13 01:30:31] 2025-10-12 23:29:30,017 | INFO     | will attempt to kill all subprocesses of pid=2249954
[2025-10-13 01:30:31] 2025-10-12 23:29:30,059 | INFO     | process IDs to be killed: [2249954] (in reverse order)
[2025-10-13 01:30:31] 2025-10-12 23:29:30,083 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:30:31] 2025-10-12 23:29:30,083 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:30:31] 2025-10-12 23:29:30,084 | INFO     | did not find any defunct processes belonging to 2249954
[2025-10-13 01:30:31] 2025-10-12 23:29:30,085 | INFO     | did not find any defunct processes belonging to 2249954
[2025-10-13 01:30:31] 2025-10-12 23:29:30,085 | INFO     | ready for new job
[2025-10-13 01:30:31] 2025-10-12 23:29:30,085 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:30:31] 2025-10-12 23:29:30,086 | INFO     | ***************************************
[2025-10-13 01:30:31] 2025-10-12 23:29:30,086 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:30:31] 2025-10-12 23:29:30,086 | INFO     | ***************************************
[2025-10-13 01:30:31] 2025-10-12 23:29:30,086 | INFO     | 
[2025-10-13 01:30:31] 2025-10-12 23:29:30,086 | INFO     | architecture information:
[2025-10-13 01:30:31] 2025-10-12 23:29:30,087 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:30:31] 2025-10-12 23:29:30,095 | INFO     | cat /etc/os-release:
[2025-10-13 01:30:31] NAME="CentOS Linux"
[2025-10-13 01:30:31] VERSION="7 (Core)"
[2025-10-13 01:30:31] ID="centos"
[2025-10-13 01:30:31] ID_LIKE="rhel fedora"
[2025-10-13 01:30:31] VERSION_ID="7"
[2025-10-13 01:30:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:30:31] ANSI_COLOR="0;31"
[2025-10-13 01:30:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:30:31] HOME_URL="https://www.centos.org/"
[2025-10-13 01:30:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:30:31] 
[2025-10-13 01:30:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:30:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:30:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:30:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:30:31] 
[2025-10-13 01:30:31] 2025-10-12 23:29:30,095 | INFO     | ***************************************
[2025-10-13 01:30:31] 2025-10-12 23:29:30,598 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 01:30:31] 2025-10-12 23:29:30,611 | INFO     | sufficient remaining disk space (370042470400 B)
[2025-10-13 01:30:31] 2025-10-12 23:29:30,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:30:31] 2025-10-12 23:29:30,611 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:30:31] 2025-10-12 23:29:30,611 | INFO     | update_server=False
[2025-10-13 01:30:31] 2025-10-12 23:29:30,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:30:31] 2025-10-12 23:29:30,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:30:31] 2025-10-12 23:29:30,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:30:31] 2025-10-12 23:29:30,673 | INFO     | all data control threads have been joined
[2025-10-13 01:30:31] 2025-10-12 23:29:31,015 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 01:30:31] 2025-10-12 23:29:31,015 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 01:30:31] 2025-10-12 23:29:31,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:30:31] 2025-10-12 23:29:31,015 | INFO     | will abort loop
[2025-10-13 01:30:31] 2025-10-12 23:29:31,301 | INFO     | all job control threads have been joined
[2025-10-13 01:30:31] 2025-10-12 23:29:31,462 | INFO     | all payload control threads have been joined
[2025-10-13 01:30:31] 2025-10-12 23:29:31,617 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:31,617 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:31,679 | INFO     | [data] control thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:31,790 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:31,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:30:31] 2025-10-12 23:29:32,021 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:32,075 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:32,151 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:32,307 | INFO     | [job] control thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:32,358 | INFO     | [job] validate thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:32,368 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:32,432 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:32,468 | INFO     | [payload] control thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:32,697 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:33,991 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:34,618 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:29:41,367 | INFO     | job.realtimelogging is not enabled
[2025-10-13 01:30:31] 2025-10-12 23:29:42,373 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:30:31] 2025-10-12 23:30:00,366 | INFO     | PID=2243523 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:30:31] 2025-10-12 23:30:00,367 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:30:31] 2025-10-12 23:30:00,367 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:30:31] 2025-10-12 23:30:00,367 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:30:31] 2025-10-12 23:30:24,825 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:30:31] 2025-10-12 23:30:25,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139658313041728)>', '<ExcThread(monitor, started 139657798985472)>']
[2025-10-13 01:30:31] 2025-10-12 23:30:26,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:30:31] 2025-10-12 23:30:26,502 | INFO     | [monitor] control thread has ended
[2025-10-13 01:30:31] 2025-10-12 23:30:30,880 | INFO     | all workflow threads have been joined
[2025-10-13 01:30:31] 2025-10-12 23:30:30,880 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:30:31] 2025-10-12 23:30:30,880 | INFO     | traces error code: 0
[2025-10-13 01:30:31] 2025-10-12 23:30:30,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:30:31] 2025-10-12 23:30:30,931 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:30:31] 2025-10-12 23:30:30,934 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:30:31] 2025-10-12 23:30:30,936 [wrapper] pilotpid: 2243523
[2025-10-13 01:30:31] 2025-10-12 23:30:30,938 [wrapper] Pilot exit status: 0
[2025-10-13 01:30:31] 2025-10-12 23:30:30,945 [wrapper] pandaids: 6838454039
[2025-10-13 01:30:31] 2025-10-12 23:30:30,962 [wrapper] cleanup supervisor_pilot 2261928 2243524
[2025-10-13 01:30:31] 2025-10-12 23:30:30,965 [wrapper] Test setup, not cleaning
[2025-10-13 01:30:31] 2025-10-12 23:30:30,967 [wrapper] apfmon messages muted
[2025-10-13 01:30:31] 2025-10-12 23:30:30,969 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:30:31] 2025-10-12 23:30:30,971 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:30:31]  *** Error codes and diagnostics ***
[2025-10-13 01:30:31]     "exeErrorCode": 0,
[2025-10-13 01:30:31]     "exeErrorDiag": "",
[2025-10-13 01:30:31]     "pilotErrorCode": 0,
[2025-10-13 01:30:31]     "pilotErrorDiag": "",
[2025-10-13 01:30:31]  *** Listing of results directory ***
[2025-10-13 01:30:31] total 410036
[2025-10-13 01:30:31] -rw-r--r-- 1 boinc boinc    557409 Oct 11 16:01 pilot3.tar.gz
[2025-10-13 01:30:31] -rwx------ 1 boinc boinc     36292 Oct 11 16:28 runpilot2-wrapper.sh
[2025-10-13 01:30:31] -rw-r--r-- 1 boinc boinc      5112 Oct 11 16:28 queuedata.json
[2025-10-13 01:30:31] -rw-r--r-- 1 boinc boinc       100 Oct 13 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:30:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 00:10 run_atlas
[2025-10-13 01:30:31] -rw-r--r-- 1 boinc boinc       105 Oct 13 00:10 job.xml
[2025-10-13 01:30:31] -rw-r--r-- 2 boinc boinc 219921363 Oct 13 00:10 EVNT.46676267._002386.pool.root.1
[2025-10-13 01:30:31] -rw-r--r-- 2 boinc boinc    569677 Oct 13 00:10 input.tar.gz
[2025-10-13 01:30:31] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:10 start_atlas.sh
[2025-10-13 01:30:31] drwxrwx--x 2 boinc boinc      4096 Oct 13 00:10 shared
[2025-10-13 01:30:31] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:10 boinc_setup_complete
[2025-10-13 01:30:31] -rw-r--r-- 1 boinc boinc      6450 Oct 13 00:10 init_data.xml
[2025-10-13 01:30:31] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:10 boinc_lockfile
[2025-10-13 01:30:31] -rw-r--r-- 1 boinc boinc      2549 Oct 13 00:10 pandaJob.out
[2025-10-13 01:30:31] -rw------- 1 boinc boinc    975528 Oct 13 00:10 agis_schedconf.cvmfs.json
[2025-10-13 01:30:31] -rw------- 1 boinc boinc   1560580 Oct 13 00:10 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:30:31] drwx------ 5 boinc boinc      4096 Oct 13 00:10 pilot3
[2025-10-13 01:30:31] -rw------- 1 boinc boinc 194142295 Oct 13 01:29 HITS.46676269._059364.pool.root.1
[2025-10-13 01:30:31] -rw-r--r-- 1 boinc boinc       529 Oct 13 01:29 boinc_task_state.xml
[2025-10-13 01:30:31] -rw------- 1 boinc boinc      1028 Oct 13 01:29 memory_monitor_summary.json
[2025-10-13 01:30:31] -rw------- 1 boinc boinc    252790 Oct 13 01:29 log.46676269._059364.job.log.tgz.1
[2025-10-13 01:30:31] -rw------- 1 boinc boinc      7746 Oct 13 01:29 heartbeat.json
[2025-10-13 01:30:31] -rw------- 1 boinc boinc        95 Oct 13 01:30 pilot_heartbeat.json
[2025-10-13 01:30:31] -rw-r--r-- 1 boinc boinc        27 Oct 13 01:30 wrapper_checkpoint.txt
[2025-10-13 01:30:31] -rw-r--r-- 1 boinc boinc      8192 Oct 13 01:30 boinc_mmap_file
[2025-10-13 01:30:31] -rw------- 1 boinc boinc      5010 Oct 13 01:30 pilotlog.txt
[2025-10-13 01:30:31] -rw------- 1 boinc boinc    700088 Oct 13 01:30 log.46676269._059364.job.log.1
[2025-10-13 01:30:31] -rw------- 1 boinc boinc       357 Oct 13 01:30 output.list
[2025-10-13 01:30:31] -rw-r--r-- 1 boinc boinc       620 Oct 13 01:30 runtime_log
[2025-10-13 01:30:31] -rw------- 1 boinc boinc    972800 Oct 13 01:30 result.tar.gz
[2025-10-13 01:30:31] -rw-r--r-- 1 boinc boinc      8792 Oct 13 01:30 runtime_log.err
[2025-10-13 01:30:31] -rw------- 1 boinc boinc       661 Oct 13 01:30 JJnNDmukpR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm53RMDmaj9Azm.diag
[2025-10-13 01:30:31] -rw-r--r-- 1 boinc boinc     21729 Oct 13 01:30 stderr.txt
[2025-10-13 01:30:31] HITS file was successfully produced:
[2025-10-13 01:30:31] -rw------- 1 boinc boinc 194142295 Oct 13 01:29 shared/HITS.pool.root.1
[2025-10-13 01:30:31]  *** Contents of shared directory: ***
[2025-10-13 01:30:31] total 405900
[2025-10-13 01:30:31] -rw-r--r-- 2 boinc boinc 219921363 Oct 13 00:10 ATLAS.root_0
[2025-10-13 01:30:31] -rw-r--r-- 2 boinc boinc    569677 Oct 13 00:10 input.tar.gz
[2025-10-13 01:30:31] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:10 start_atlas.sh
[2025-10-13 01:30:31] -rw------- 1 boinc boinc 194142295 Oct 13 01:29 HITS.pool.root.1
[2025-10-13 01:30:31] -rw------- 1 boinc boinc    972800 Oct 13 01:30 result.tar.gz
01:30:32 (2239402): run_atlas exited; CPU time 13614.458304
01:30:32 (2239402): called boinc_finish(0)

</stderr_txt>
]]>

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