Name dtZKDmdipR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRggNDm7UVCYo_1
Workunit 235897611
Created 11 Oct 2025, 17:17:50 UTC
Sent 11 Oct 2025, 19:36:55 UTC
Report deadline 19 Oct 2025, 19:36:55 UTC
Received 11 Oct 2025, 22:48:38 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10674861
Run time 3 hours 5 min 38 sec
CPU time 22 hours 48 min 11 sec
Validate state Valid
Credit 396.51
Device peak FLOPS 27.52 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.52 GB
Peak swap size 3.02 GB
Peak disk usage 619.35 MB

Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:37:12 (9360): wrapper (7.7.26015): starting
15:37:12 (9360): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 15:37:12] Arguments: --nthreads 8
[2025-10-11 15:37:12] Threads: 8
[2025-10-11 15:37:12] Checking for CVMFS
[2025-10-11 15:37:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 15:37:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 15:37:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 15:37:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 15:37:12] 2.11.2.0 4362 112418 139464 151594 3 57 18087066 18432001 1833 130560 1 109280872 99.989 4933215 22209 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 15:37:12] CVMFS is ok
[2025-10-11 15:37:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 15:37:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 15:37:12] Further information can be found at the LHC@home message board.
[2025-10-11 15:37:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 15:37:12] Checking for apptainer binary...
[2025-10-11 15:37:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 15:37:12] Running /usr/bin/apptainer --version
[2025-10-11 15:37:12] apptainer version 1.3.2-1.el7
[2025-10-11 15:37:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 15:37:13] c-206-29.aglt2.org
[2025-10-11 15:37:13] apptainer works
[2025-10-11 15:37:13] Set ATHENA_PROC_NUMBER=8
[2025-10-11 15:37:13] Set ATHENA_CORE_NUMBER=8
[2025-10-11 15:37:13] Starting ATLAS job with PandaID=6838453466
[2025-10-11 15:37:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 18:42:47]  *** The last 200 lines of the pilot log: ***
[2025-10-11 18:42:47] 2025-10-11 22:41:52,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:42:47] 2025-10-11 22:41:53,539 | INFO     | time since job start (11069s) is within the limit (172800.0s)
[2025-10-11 18:42:47] 2025-10-11 22:41:54,668 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 18:42:47] 2025-10-11 22:41:54,672 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2444.625
[2025-10-11 18:42:47] 2025-10-11 22:41:54,675 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838453466/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 18:42:47] 2025-10-11 22:41:54,675 | INFO     | extracted standard info from prmon json
[2025-10-11 18:42:47] 2025-10-11 22:41:54,675 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 18:42:47] 2025-10-11 22:41:54,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 18:42:47] 2025-10-11 22:41:54,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 18:42:47] 2025-10-11 22:41:54,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 18:42:47] 2025-10-11 22:41:54,679 | INFO     | fitting pss+swap vs Time
[2025-10-11 18:42:47] 2025-10-11 22:41:54,679 | INFO     | sum of square deviations: 1838657730.0
[2025-10-11 18:42:47] 2025-10-11 22:41:54,680 | INFO     | sum of deviations: -2094940385.0000007
[2025-10-11 18:42:47] 2025-10-11 22:41:54,680 | INFO     | mean x: 1760216960.0
[2025-10-11 18:42:47] 2025-10-11 22:41:54,680 | INFO     | mean y: 2514416.718232044
[2025-10-11 18:42:47] 2025-10-11 22:41:54,680 | INFO     | -- intersect: 2008080507.5131357
[2025-10-11 18:42:47] 2025-10-11 22:41:54,680 | INFO     | intersect: 2008080507.5131357
[2025-10-11 18:42:47] 2025-10-11 22:41:54,681 | INFO     | chi2: 1.6247892799590107
[2025-10-11 18:42:47] 2025-10-11 22:41:54,681 | INFO     | sum of square deviations: 1690450300.0
[2025-10-11 18:42:47] 2025-10-11 22:41:54,682 | INFO     | sum of deviations: -1887414084.4999955
[2025-10-11 18:42:47] 2025-10-11 22:41:54,682 | INFO     | mean x: 1760216807.5
[2025-10-11 18:42:47] 2025-10-11 22:41:54,682 | INFO     | mean y: 2514630.789772727
[2025-10-11 18:42:47] 2025-10-11 22:41:54,682 | INFO     | -- intersect: 1967824107.3529804
[2025-10-11 18:42:47] 2025-10-11 22:41:54,682 | INFO     | intersect: 1967824107.3529804
[2025-10-11 18:42:47] 2025-10-11 22:41:54,682 | INFO     | chi2: 1.6248829174402635
[2025-10-11 18:42:47] 2025-10-11 22:41:54,683 | INFO     | current chi2=1.6248829174402635 (change=-0.005763053856138033 %)
[2025-10-11 18:42:47] 2025-10-11 22:41:54,683 | INFO     | right removable region: 175
[2025-10-11 18:42:47] 2025-10-11 22:41:54,683 | INFO     | sum of square deviations: 1690450300.0
[2025-10-11 18:42:47] 2025-10-11 22:41:54,684 | INFO     | sum of deviations: -28958227836.5
[2025-10-11 18:42:47] 2025-10-11 22:41:54,684 | INFO     | mean x: 1760217112.5
[2025-10-11 18:42:47] 2025-10-11 22:41:54,684 | INFO     | mean y: 2541706.335227273
[2025-10-11 18:42:47] 2025-10-11 22:41:54,684 | INFO     | -- intersect: 30155908643.81996
[2025-10-11 18:42:47] 2025-10-11 22:41:54,684 | INFO     | intersect: 30155908643.81996
[2025-10-11 18:42:47] 2025-10-11 22:41:54,684 | INFO     | chi2: 0.19650049259319197
[2025-10-11 18:42:47] 2025-10-11 22:41:54,685 | INFO     | current chi2=0.19650049259319197 (change=87.90609373061909 %)
[2025-10-11 18:42:47] 2025-10-11 22:41:54,685 | INFO     | sum of square deviations: 1550429070.0
[2025-10-11 18:42:47] 2025-10-11 22:41:54,686 | INFO     | sum of deviations: -31016326325.999992
[2025-10-11 18:42:47] 2025-10-11 22:41:54,686 | INFO     | mean x: 1760217265.0
[2025-10-11 18:42:47] 2025-10-11 22:41:54,686 | INFO     | mean y: 2543911.1228070175
[2025-10-11 18:42:47] 2025-10-11 22:41:54,686 | INFO     | -- intersect: 35215682101.24924
[2025-10-11 18:42:47] 2025-10-11 22:41:54,686 | INFO     | intersect: 35215682101.24924
[2025-10-11 18:42:47] 2025-10-11 22:41:54,686 | INFO     | chi2: 0.16479223502216736
[2025-10-11 18:42:47] 2025-10-11 22:41:54,686 | INFO     | current chi2=0.16479223502216736 (change=16.13647739635396 %)
[2025-10-11 18:42:47] 2025-10-11 22:41:54,686 | INFO     | left removable region: 20
[2025-10-11 18:42:47] 2025-10-11 22:41:54,687 | INFO     | sum of square deviations: 1154663510.0
[2025-10-11 18:42:47] 2025-10-11 22:41:54,687 | INFO     | sum of deviations: -20072565144.999985
[2025-10-11 18:42:47] 2025-10-11 22:41:54,687 | INFO     | mean x: 1760217387.0
[2025-10-11 18:42:47] 2025-10-11 22:41:54,688 | INFO     | mean y: 2532683.148387097
[2025-10-11 18:42:47] 2025-10-11 22:41:54,688 | INFO     | -- intersect: 30601991195.454845
[2025-10-11 18:42:47] 2025-10-11 22:41:54,688 | INFO     | intersect: 30601991195.454845
[2025-10-11 18:42:47] 2025-10-11 22:41:54,688 | INFO     | chi2: 0.1442152090675594
[2025-10-11 18:42:47] 2025-10-11 22:41:54,688 | INFO     | -- intersect: 30601991195.454845
[2025-10-11 18:42:47] 2025-10-11 22:41:54,688 | INFO     | current memory leak: -17.38 B/s (using 155 data points, chi2=0.14)
[2025-10-11 18:42:47] 2025-10-11 22:41:54,689 | INFO     | could have reported an average CPU frequency of 2531 MHz (10 samples)
[2025-10-11 18:42:47] 2025-10-11 22:41:54,689 | INFO     | ..............................
[2025-10-11 18:42:47] 2025-10-11 22:41:54,689 | INFO     | . Timing measurements:
[2025-10-11 18:42:47] 2025-10-11 22:41:54,689 | INFO     | . get job = 0 s
[2025-10-11 18:42:47] 2025-10-11 22:41:54,689 | INFO     | . initial setup = 2 s
[2025-10-11 18:42:47] 2025-10-11 22:41:54,689 | INFO     | . payload setup = 5 s
[2025-10-11 18:42:47] 2025-10-11 22:41:54,689 | INFO     | . stage-in = 0 s
[2025-10-11 18:42:47] 2025-10-11 22:41:54,689 | INFO     | . payload execution = 11036 s
[2025-10-11 18:42:47] 2025-10-11 22:41:54,689 | INFO     | . stage-out = 2 s
[2025-10-11 18:42:47] 2025-10-11 22:41:54,690 | INFO     | . log creation = 0 s
[2025-10-11 18:42:47] 2025-10-11 22:41:54,690 | INFO     | ..............................
[2025-10-11 18:42:47] 2025-10-11 22:41:54,779 | INFO     | 
[2025-10-11 18:42:47] 2025-10-11 22:41:54,780 | INFO     | job summary report
[2025-10-11 18:42:47] 2025-10-11 22:41:54,780 | INFO     | --------------------------------------------------
[2025-10-11 18:42:47] 2025-10-11 22:41:54,780 | INFO     | PanDA job id: 6838453466
[2025-10-11 18:42:47] 2025-10-11 22:41:54,780 | INFO     | task id: 46676269
[2025-10-11 18:42:47] 2025-10-11 22:41:54,780 | INFO     | errors: (none)
[2025-10-11 18:42:47] 2025-10-11 22:41:54,781 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 18:42:47] 2025-10-11 22:41:54,781 | INFO     | pilot state: finished 
[2025-10-11 18:42:47] 2025-10-11 22:41:54,781 | INFO     | transexitcode: 0
[2025-10-11 18:42:47] 2025-10-11 22:41:54,781 | INFO     | exeerrorcode: 0
[2025-10-11 18:42:47] 2025-10-11 22:41:54,781 | INFO     | exeerrordiag: 
[2025-10-11 18:42:47] 2025-10-11 22:41:54,781 | INFO     | exitcode: 0
[2025-10-11 18:42:47] 2025-10-11 22:41:54,782 | INFO     | exitmsg: OK
[2025-10-11 18:42:47] 2025-10-11 22:41:54,782 | INFO     | cpuconsumptiontime: 81710 s
[2025-10-11 18:42:47] 2025-10-11 22:41:54,782 | INFO     | nevents: 400
[2025-10-11 18:42:47] 2025-10-11 22:41:54,782 | INFO     | neventsw: 0
[2025-10-11 18:42:47] 2025-10-11 22:41:54,782 | INFO     | pid: 19581
[2025-10-11 18:42:47] 2025-10-11 22:41:54,782 | INFO     | pgrp: 19581
[2025-10-11 18:42:47] 2025-10-11 22:41:54,783 | INFO     | corecount: 8
[2025-10-11 18:42:47] 2025-10-11 22:41:54,783 | INFO     | event service: False
[2025-10-11 18:42:47] 2025-10-11 22:41:54,783 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 12: 2349175, 11045: 2378305, 11048: 2387303, 11049: 2387487, 11055: 2387681}
[2025-10-11 18:42:47] 2025-10-11 22:41:54,783 | INFO     | --------------------------------------------------
[2025-10-11 18:42:47] 2025-10-11 22:41:54,783 | INFO     | 
[2025-10-11 18:42:47] 2025-10-11 22:41:54,784 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 18:42:47] 2025-10-11 22:41:54,803 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,803 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,803 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,803 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,804 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,805 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,805 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,805 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,805 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,805 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,806 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,806 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,806 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 18:42:47] 2025-10-11 22:41:54,806 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,806 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 18:42:47] 2025-10-11 22:41:54,807 | INFO     | job 6838453466 has completed (purged errors)
[2025-10-11 18:42:47] 2025-10-11 22:41:54,807 | INFO     | overall cleanup function is called
[2025-10-11 18:42:47] 2025-10-11 22:41:55,815 | INFO     | --- collectZombieJob: --- 10, [19581]
[2025-10-11 18:42:47] 2025-10-11 22:41:55,815 | INFO     | zombie collector waiting for pid 19581
[2025-10-11 18:42:47] 2025-10-11 22:41:55,816 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 18:42:47] 2025-10-11 22:41:55,816 | INFO     | collected zombie processes
[2025-10-11 18:42:47] 2025-10-11 22:41:55,816 | INFO     | will attempt to kill all subprocesses of pid=19581
[2025-10-11 18:42:47] 2025-10-11 22:41:55,975 | INFO     | process IDs to be killed: [19581] (in reverse order)
[2025-10-11 18:42:47] 2025-10-11 22:41:56,035 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 18:42:47] 2025-10-11 22:41:56,035 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 18:42:47] 2025-10-11 22:41:56,040 | INFO     | did not find any defunct processes belonging to 19581
[2025-10-11 18:42:47] 2025-10-11 22:41:56,045 | INFO     | did not find any defunct processes belonging to 19581
[2025-10-11 18:42:47] 2025-10-11 22:41:56,045 | INFO     | ready for new job
[2025-10-11 18:42:47] 2025-10-11 22:41:56,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 18:42:47] 2025-10-11 22:41:56,047 | INFO     | ***************************************
[2025-10-11 18:42:47] 2025-10-11 22:41:56,048 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 18:42:47] 2025-10-11 22:41:56,048 | INFO     | ***************************************
[2025-10-11 18:42:47] 2025-10-11 22:41:56,048 | INFO     | 
[2025-10-11 18:42:47] 2025-10-11 22:41:56,049 | INFO     | architecture information:
[2025-10-11 18:42:47] 2025-10-11 22:41:56,050 | INFO     | executing command: cat /etc/os-release
[2025-10-11 18:42:47] 2025-10-11 22:41:56,063 | INFO     | cat /etc/os-release:
[2025-10-11 18:42:47] NAME="CentOS Linux"
[2025-10-11 18:42:47] VERSION="7 (Core)"
[2025-10-11 18:42:47] ID="centos"
[2025-10-11 18:42:47] ID_LIKE="rhel fedora"
[2025-10-11 18:42:47] VERSION_ID="7"
[2025-10-11 18:42:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 18:42:47] ANSI_COLOR="0;31"
[2025-10-11 18:42:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 18:42:47] HOME_URL="https://www.centos.org/"
[2025-10-11 18:42:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 18:42:47] 
[2025-10-11 18:42:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 18:42:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 18:42:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 18:42:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 18:42:47] 
[2025-10-11 18:42:47] 2025-10-11 22:41:56,063 | INFO     | ***************************************
[2025-10-11 18:42:47] 2025-10-11 22:41:56,567 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 18:42:47] 2025-10-11 22:41:56,583 | INFO     | sufficient remaining disk space (28110225408 B)
[2025-10-11 18:42:47] 2025-10-11 22:41:56,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 18:42:47] 2025-10-11 22:41:56,583 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 18:42:47] 2025-10-11 22:41:56,583 | INFO     | update_server=False
[2025-10-11 18:42:47] 2025-10-11 22:41:56,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 18:42:47] 2025-10-11 22:41:56,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:42:47] 2025-10-11 22:41:56,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 18:42:47] 2025-10-11 22:41:56,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:42:47] 2025-10-11 22:41:56,585 | INFO     | aborting loop
[2025-10-11 18:42:47] 2025-10-11 22:41:56,612 | INFO     | all data control threads have been joined
[2025-10-11 18:42:47] 2025-10-11 22:41:56,819 | INFO     | all payload control threads have been joined
[2025-10-11 18:42:47] 2025-10-11 22:41:57,513 | INFO     | all job control threads have been joined
[2025-10-11 18:42:47] 2025-10-11 22:41:57,589 | INFO     | [job] queue monitor thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:41:57,589 | INFO     | [job] job monitor thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:41:57,590 | INFO     | [job] retrieve thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:41:57,618 | INFO     | [data] control thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:41:57,769 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:41:57,812 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:41:57,812 | INFO     | [job] validate thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:41:57,825 | INFO     | [payload] control thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:41:58,437 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:41:58,516 | INFO     | [job] control thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:41:58,590 | INFO     | [data] copytool_out thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:41:58,696 | INFO     | [payload] validate_post thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:41:58,833 | INFO     | [data] copytool_in thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:41:58,855 | INFO     | [payload] failed_post thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:41:58,940 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 18:42:47] 2025-10-11 22:42:02,948 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:42:07,619 | INFO     | job.realtimelogging is not enabled
[2025-10-11 18:42:47] 2025-10-11 22:42:08,625 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 18:42:47] 2025-10-11 22:42:26,771 | INFO     | PID=13029 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 18:42:47] 2025-10-11 22:42:26,771 | INFO     | .. there are 3 such processes running
[2025-10-11 18:42:47] 2025-10-11 22:42:26,783 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 18:42:47] 2025-10-11 22:42:26,783 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 18:42:47] 2025-10-11 22:42:26,783 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 18:42:47] 2025-10-11 22:42:41,601 | INFO     | [monitor] cgroup control has ended
[2025-10-11 18:42:47] 2025-10-11 22:42:42,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139694596138816)>', '<ExcThread(monitor, started 139693937125120)>']
[2025-10-11 18:42:47] 2025-10-11 22:42:42,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 18:42:47] 2025-10-11 22:42:42,862 | INFO     | [monitor] control thread has ended
[2025-10-11 18:42:47] 2025-10-11 22:42:47,068 | INFO     | all workflow threads have been joined
[2025-10-11 18:42:47] 2025-10-11 22:42:47,068 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 18:42:47] 2025-10-11 22:42:47,068 | INFO     | traces error code: 0
[2025-10-11 18:42:47] 2025-10-11 22:42:47,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 18:42:47] 2025-10-11 22:42:47,182 [wrapper] ==== pilot stdout END ====
[2025-10-11 18:42:47] 2025-10-11 22:42:47,185 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 18:42:47] 2025-10-11 22:42:47,187 [wrapper] pilotpid: 13029
[2025-10-11 18:42:47] 2025-10-11 22:42:47,190 [wrapper] Pilot exit status: 0
[2025-10-11 18:42:47] 2025-10-11 22:42:47,217 [wrapper] pandaids: 6838453466
[2025-10-11 18:42:47] 2025-10-11 22:42:47,250 [wrapper] cleanup supervisor_pilot  5723 13030
[2025-10-11 18:42:47] 2025-10-11 22:42:47,253 [wrapper] Test setup, not cleaning
[2025-10-11 18:42:47] 2025-10-11 22:42:47,256 [wrapper] apfmon messages muted
[2025-10-11 18:42:47] 2025-10-11 22:42:47,258 [wrapper] ==== wrapper stdout END ====
[2025-10-11 18:42:47] 2025-10-11 22:42:47,261 [wrapper] ==== wrapper stderr END ====
[2025-10-11 18:42:47]  *** Error codes and diagnostics ***
[2025-10-11 18:42:47]     "exeErrorCode": 0,
[2025-10-11 18:42:47]     "exeErrorDiag": "",
[2025-10-11 18:42:47]     "pilotErrorCode": 0,
[2025-10-11 18:42:47]     "pilotErrorDiag": "",
[2025-10-11 18:42:47]  *** Listing of results directory ***
[2025-10-11 18:42:47] total 415416
[2025-10-11 18:42:47] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 10:01 pilot3.tar.gz
[2025-10-11 18:42:47] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 10:25 queuedata.json
[2025-10-11 18:42:47] -rwx------ 1 boincer umatlas     36292 Oct 11 10:25 runpilot2-wrapper.sh
[2025-10-11 18:42:47] -rw-r--r-- 1 boincer umatlas       100 Oct 11 15:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 18:42:47] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 15:37 run_atlas
[2025-10-11 18:42:47] -rw-r--r-- 1 boincer umatlas       105 Oct 11 15:37 job.xml
[2025-10-11 18:42:47] -rw-r--r-- 2 boincer umatlas 223560212 Oct 11 15:37 EVNT.46676267._002384.pool.root.1
[2025-10-11 18:42:47] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 15:37 start_atlas.sh
[2025-10-11 18:42:47] drwxrwx--x 2 boincer umatlas      4096 Oct 11 15:37 shared
[2025-10-11 18:42:47] -rw-r--r-- 2 boincer umatlas    569682 Oct 11 15:37 input.tar.gz
[2025-10-11 18:42:47] -rw-r--r-- 1 boincer umatlas         0 Oct 11 15:37 boinc_lockfile
[2025-10-11 18:42:47] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 15:37 pandaJob.out
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas    975512 Oct 11 15:37 agis_schedconf.cvmfs.json
[2025-10-11 18:42:47] drwx------ 5 boincer umatlas      4096 Oct 11 15:37 pilot3
[2025-10-11 18:42:47] -rw-r--r-- 1 boincer umatlas      5951 Oct 11 18:39 init_data.xml
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas 193961981 Oct 11 18:41 HITS.46676269._059309.pool.root.1
[2025-10-11 18:42:47] -rw-r--r-- 1 boincer umatlas       530 Oct 11 18:41 boinc_task_state.xml
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas      1067 Oct 11 18:41 memory_monitor_summary.json
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas   1560580 Oct 11 18:41 agis_ddmendpoints.agis.ALL.json
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas    418366 Oct 11 18:41 log.46676269._059309.job.log.tgz.1
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas      7861 Oct 11 18:41 heartbeat.json
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas        95 Oct 11 18:42 pilot_heartbeat.json
[2025-10-11 18:42:47] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 18:42 boinc_mmap_file
[2025-10-11 18:42:47] -rw-r--r-- 1 boincer umatlas        28 Oct 11 18:42 wrapper_checkpoint.txt
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas      4893 Oct 11 18:42 pilotlog.txt
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas   1559286 Oct 11 18:42 log.46676269._059309.job.log.1
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas       357 Oct 11 18:42 output.list
[2025-10-11 18:42:47] -rw-r--r-- 1 boincer umatlas       620 Oct 11 18:42 runtime_log
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas   1996800 Oct 11 18:42 result.tar.gz
[2025-10-11 18:42:47] -rw-r--r-- 1 boincer umatlas      8704 Oct 11 18:42 runtime_log.err
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas       662 Oct 11 18:42 dtZKDmdipR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRggNDm7UVCYo.diag
[2025-10-11 18:42:47] -rw-r--r-- 1 boincer umatlas     21089 Oct 11 18:42 stderr.txt
[2025-10-11 18:42:47] HITS file was successfully produced:
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas 193961981 Oct 11 18:41 shared/HITS.pool.root.1
[2025-10-11 18:42:47]  *** Contents of shared directory: ***
[2025-10-11 18:42:47] total 410276
[2025-10-11 18:42:47] -rw-r--r-- 2 boincer umatlas 223560212 Oct 11 15:37 ATLAS.root_0
[2025-10-11 18:42:47] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 15:37 start_atlas.sh
[2025-10-11 18:42:47] -rw-r--r-- 2 boincer umatlas    569682 Oct 11 15:37 input.tar.gz
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas 193961981 Oct 11 18:41 HITS.pool.root.1
[2025-10-11 18:42:47] -rw------- 1 boincer umatlas   1996800 Oct 11 18:42 result.tar.gz
18:42:49 (9360): run_atlas exited; CPU time 81837.860754
18:42:49 (9360): called boinc_finish(0)

</stderr_txt>
]]>


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