Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:40:15 (3652322): wrapper (7.7.26015): starting
16:40:15 (3652322): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 16:40:15] Arguments: --nthreads 8
[2025-10-11 16:40:15] Threads: 8
[2025-10-11 16:40:15] Checking for CVMFS
[2025-10-11 16:40:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:40:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:40:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:40:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:40:16] 2.13.2.0 1923533 129596 429408 151595 0 382 20650105 32935936 41967 16776704 0 427990828 99.650 384536283 17208 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 16:40:16] CVMFS is ok
[2025-10-11 16:40:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:40:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:40:16] Further information can be found at the LHC@home message board.
[2025-10-11 16:40:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:40:16] Checking for apptainer binary...
[2025-10-11 16:40:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:40:16] Running /usr/bin/apptainer --version
[2025-10-11 16:40:16] apptainer version 1.4.3-1.el9
[2025-10-11 16:40:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:40:16] c7-3-17.aglt2.org
[2025-10-11 16:40:16] apptainer works
[2025-10-11 16:40:16] Set ATHENA_PROC_NUMBER=8
[2025-10-11 16:40:16] Set ATHENA_CORE_NUMBER=8
[2025-10-11 16:40:16] Starting ATLAS job with PandaID=6838633989
[2025-10-11 16:40:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:49:33]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:49:33] 2025-10-12 01:48:53,851 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:49:33] 2025-10-12 01:48:54,328 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 21:49:33] 2025-10-12 01:48:54,346 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3080.0911458333326
[2025-10-11 21:49:33] 2025-10-12 01:48:54,359 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838633989/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 21:49:33] 2025-10-12 01:48:54,360 | INFO     | extracted standard info from prmon json
[2025-10-11 21:49:33] 2025-10-12 01:48:54,360 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 21:49:33] 2025-10-12 01:48:54,360 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 21:49:33] 2025-10-12 01:48:54,361 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:49:33] 2025-10-12 01:48:54,361 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:49:33] 2025-10-12 01:48:54,381 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:49:33] 2025-10-12 01:48:54,382 | INFO     | sum of square deviations: 8541227719.589427
[2025-10-11 21:49:33] 2025-10-12 01:48:54,384 | INFO     | sum of deviations: -20826500474.576138
[2025-10-11 21:49:33] 2025-10-12 01:48:54,384 | INFO     | mean x: 1760224482.8543046
[2025-10-11 21:49:33] 2025-10-12 01:48:54,384 | INFO     | mean y: 2153852.8278145697
[2025-10-11 21:49:33] 2025-10-12 01:48:54,384 | INFO     | -- intersect: 4294196780.502843
[2025-10-11 21:49:33] 2025-10-12 01:48:54,384 | INFO     | intersect: 4294196780.502843
[2025-10-11 21:49:33] 2025-10-12 01:48:54,384 | INFO     | chi2: 2.3027019272873055
[2025-10-11 21:49:33] 2025-10-12 01:48:54,385 | INFO     | sum of square deviations: 8124015626.168364
[2025-10-11 21:49:33] 2025-10-12 01:48:54,387 | INFO     | sum of deviations: -19621053095.959587
[2025-10-11 21:49:33] 2025-10-12 01:48:54,387 | INFO     | mean x: 1760224330.3569024
[2025-10-11 21:49:33] 2025-10-12 01:48:54,387 | INFO     | mean y: 2154291.5656565656
[2025-10-11 21:49:33] 2025-10-12 01:48:54,387 | INFO     | -- intersect: 4253433047.7861247
[2025-10-11 21:49:33] 2025-10-12 01:48:54,387 | INFO     | intersect: 4253433047.7861247
[2025-10-11 21:49:33] 2025-10-12 01:48:54,387 | INFO     | chi2: 2.3017065326786956
[2025-10-11 21:49:33] 2025-10-12 01:48:54,387 | INFO     | current chi2=2.3017065326786956 (change=0.04322724521199713 %)
[2025-10-11 21:49:33] 2025-10-12 01:48:54,387 | INFO     | right removable region: 296
[2025-10-11 21:49:33] 2025-10-12 01:48:54,388 | INFO     | sum of square deviations: 8123968656.451194
[2025-10-11 21:49:33] 2025-10-12 01:48:54,390 | INFO     | sum of deviations: -71544585621.18518
[2025-10-11 21:49:33] 2025-10-12 01:48:54,390 | INFO     | mean x: 1760224635.3602693
[2025-10-11 21:49:33] 2025-10-12 01:48:54,390 | INFO     | mean y: 2172291.814814815
[2025-10-11 21:49:33] 2025-10-12 01:48:54,390 | INFO     | -- intersect: 15503775936.856997
[2025-10-11 21:49:33] 2025-10-12 01:48:54,390 | INFO     | intersect: 15503775936.856997
[2025-10-11 21:49:33] 2025-10-12 01:48:54,390 | INFO     | chi2: 0.4329725049716382
[2025-10-11 21:49:33] 2025-10-12 01:48:54,390 | INFO     | current chi2=0.4329725049716382 (change=81.19719709091046 %)
[2025-10-11 21:49:33] 2025-10-12 01:48:54,391 | INFO     | sum of square deviations: 7720523805.7910385
[2025-10-11 21:49:33] 2025-10-12 01:48:54,392 | INFO     | sum of deviations: -61409914751.065056
[2025-10-11 21:49:33] 2025-10-12 01:48:54,393 | INFO     | mean x: 1760224787.8664384
[2025-10-11 21:49:33] 2025-10-12 01:48:54,393 | INFO     | mean y: 2168442.0239726026
[2025-10-11 21:49:33] 2025-10-12 01:48:54,393 | INFO     | -- intersect: 14003194393.722881
[2025-10-11 21:49:33] 2025-10-12 01:48:54,393 | INFO     | intersect: 14003194393.722881
[2025-10-11 21:49:33] 2025-10-12 01:48:54,393 | INFO     | chi2: 0.39346453650910646
[2025-10-11 21:49:33] 2025-10-12 01:48:54,393 | INFO     | current chi2=0.39346453650910646 (change=9.12482155538253 %)
[2025-10-11 21:49:33] 2025-10-12 01:48:54,393 | INFO     | left removable region: 20
[2025-10-11 21:49:33] 2025-10-12 01:48:54,394 | INFO     | sum of square deviations: 6519684086.289867
[2025-10-11 21:49:33] 2025-10-12 01:48:54,395 | INFO     | sum of deviations: -31591058543.826057
[2025-10-11 21:49:33] 2025-10-12 01:48:54,395 | INFO     | mean x: 1760224909.884058
[2025-10-11 21:49:33] 2025-10-12 01:48:54,395 | INFO     | mean y: 2157340.1304347827
[2025-10-11 21:49:33] 2025-10-12 01:48:54,395 | INFO     | -- intersect: 8531308053.94861
[2025-10-11 21:49:33] 2025-10-12 01:48:54,395 | INFO     | intersect: 8531308053.94861
[2025-10-11 21:49:33] 2025-10-12 01:48:54,396 | INFO     | chi2: 0.23745242272145042
[2025-10-11 21:49:33] 2025-10-12 01:48:54,396 | INFO     | -- intersect: 8531308053.94861
[2025-10-11 21:49:33] 2025-10-12 01:48:54,396 | INFO     | current memory leak: -4.85 B/s (using 276 data points, chi2=0.24)
[2025-10-11 21:49:33] 2025-10-12 01:48:54,396 | INFO     | could have reported an average CPU frequency of 3146 MHz (14 samples)
[2025-10-11 21:49:33] 2025-10-12 01:48:54,397 | INFO     | ..............................
[2025-10-11 21:49:33] 2025-10-12 01:48:54,397 | INFO     | . Timing measurements:
[2025-10-11 21:49:33] 2025-10-12 01:48:54,397 | INFO     | . get job = 0 s
[2025-10-11 21:49:33] 2025-10-12 01:48:54,397 | INFO     | . initial setup = 4 s
[2025-10-11 21:49:33] 2025-10-12 01:48:54,397 | INFO     | . payload setup = 15 s
[2025-10-11 21:49:33] 2025-10-12 01:48:54,397 | INFO     | . stage-in = 0 s
[2025-10-11 21:49:33] 2025-10-12 01:48:54,397 | INFO     | . payload execution = 18410 s
[2025-10-11 21:49:33] 2025-10-12 01:48:54,397 | INFO     | . stage-out = 6 s
[2025-10-11 21:49:33] 2025-10-12 01:48:54,397 | INFO     | . log creation = 0 s
[2025-10-11 21:49:33] 2025-10-12 01:48:54,397 | INFO     | ..............................
[2025-10-11 21:49:33] 2025-10-12 01:48:54,535 | INFO     | 
[2025-10-11 21:49:33] 2025-10-12 01:48:54,535 | INFO     | job summary report
[2025-10-11 21:49:33] 2025-10-12 01:48:54,535 | INFO     | --------------------------------------------------
[2025-10-11 21:49:33] 2025-10-12 01:48:54,535 | INFO     | PanDA job id: 6838633989
[2025-10-11 21:49:33] 2025-10-12 01:48:54,535 | INFO     | task id: 46676269
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | errors: (none)
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | pilot state: finished 
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | transexitcode: 0
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | exeerrorcode: 0
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | exeerrordiag: 
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | exitcode: 0
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | exitmsg: OK
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | cpuconsumptiontime: 34218 s
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | nevents: 400
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | neventsw: 0
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | pid: 3667874
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | pgrp: 3667874
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | corecount: 8
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | event service: False
[2025-10-11 21:49:33] 2025-10-12 01:48:54,536 | INFO     | sizes: {0: 2348686, 1: 2348885, 11: 2348885, 14: 2349175, 22: 2349203, 18432: 2381367, 18433: 2381494, 18439: 2390548, 18442: 2390604, 18455: 2390798}
[2025-10-11 21:49:33] 2025-10-12 01:48:54,537 | INFO     | --------------------------------------------------
[2025-10-11 21:49:33] 2025-10-12 01:48:54,537 | INFO     | 
[2025-10-11 21:49:33] 2025-10-12 01:48:54,537 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 21:49:33] 2025-10-12 01:48:54,564 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,564 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,564 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,564 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,564 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,564 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,564 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,564 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,564 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,564 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,565 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,565 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,565 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,565 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,565 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,565 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:49:33] 2025-10-12 01:48:54,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,565 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:49:33] 2025-10-12 01:48:54,565 | INFO     | job 6838633989 has completed (purged errors)
[2025-10-11 21:49:33] 2025-10-12 01:48:54,566 | INFO     | overall cleanup function is called
[2025-10-11 21:49:33] 2025-10-12 01:48:55,574 | INFO     | --- collectZombieJob: --- 10, [3667874]
[2025-10-11 21:49:33] 2025-10-12 01:48:55,574 | INFO     | zombie collector waiting for pid 3667874
[2025-10-11 21:49:33] 2025-10-12 01:48:55,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:49:33] 2025-10-12 01:48:55,575 | INFO     | collected zombie processes
[2025-10-11 21:49:33] 2025-10-12 01:48:55,575 | INFO     | will attempt to kill all subprocesses of pid=3667874
[2025-10-11 21:49:33] 2025-10-12 01:48:57,711 | INFO     | process IDs to be killed: [3667874] (in reverse order)
[2025-10-11 21:49:33] 2025-10-12 01:48:57,967 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:49:33] 2025-10-12 01:48:57,968 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:49:33] 2025-10-12 01:48:58,040 | INFO     | did not find any defunct processes belonging to 3667874
[2025-10-11 21:49:33] 2025-10-12 01:48:58,112 | INFO     | did not find any defunct processes belonging to 3667874
[2025-10-11 21:49:33] 2025-10-12 01:48:58,113 | INFO     | ready for new job
[2025-10-11 21:49:33] 2025-10-12 01:48:58,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:49:33] 2025-10-12 01:48:58,114 | INFO     | ***************************************
[2025-10-11 21:49:33] 2025-10-12 01:48:58,115 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:49:33] 2025-10-12 01:48:58,115 | INFO     | ***************************************
[2025-10-11 21:49:33] 2025-10-12 01:48:58,115 | INFO     | 
[2025-10-11 21:49:33] 2025-10-12 01:48:58,148 | INFO     | architecture information:
[2025-10-11 21:49:33] 2025-10-12 01:48:58,152 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:49:33] 2025-10-12 01:48:58,218 | INFO     | cat /etc/os-release:
[2025-10-11 21:49:33] NAME="CentOS Linux"
[2025-10-11 21:49:33] VERSION="7 (Core)"
[2025-10-11 21:49:33] ID="centos"
[2025-10-11 21:49:33] ID_LIKE="rhel fedora"
[2025-10-11 21:49:33] VERSION_ID="7"
[2025-10-11 21:49:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:49:33] ANSI_COLOR="0;31"
[2025-10-11 21:49:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:49:33] HOME_URL="https://www.centos.org/"
[2025-10-11 21:49:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:49:33] 
[2025-10-11 21:49:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:49:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:49:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:49:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:49:33] 
[2025-10-11 21:49:33] 2025-10-12 01:48:58,219 | INFO     | ***************************************
[2025-10-11 21:49:33] 2025-10-12 01:48:58,722 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 21:49:33] 2025-10-12 01:48:58,773 | INFO     | sufficient remaining disk space (74077700096 B)
[2025-10-11 21:49:33] 2025-10-12 01:48:58,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:49:33] 2025-10-12 01:48:58,773 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:49:33] 2025-10-12 01:48:58,773 | INFO     | update_server=False
[2025-10-11 21:49:33] 2025-10-12 01:48:58,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:49:33] 2025-10-12 01:48:58,910 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 21:49:33] 2025-10-12 01:48:58,911 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 21:49:33] 2025-10-12 01:48:58,911 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:49:33] 2025-10-12 01:48:58,911 | INFO     | will abort loop
[2025-10-11 21:49:33] 2025-10-12 01:48:59,043 | INFO     | all data control threads have been joined
[2025-10-11 21:49:33] 2025-10-12 01:48:59,142 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:49:33] 2025-10-12 01:48:59,425 | INFO     | all payload control threads have been joined
[2025-10-11 21:49:33] 2025-10-12 01:48:59,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:49:33] 2025-10-12 01:48:59,779 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:48:59,917 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:00,051 | INFO     | [data] control thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:00,155 | INFO     | all job control threads have been joined
[2025-10-11 21:49:33] 2025-10-12 01:49:00,431 | INFO     | [payload] control thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:00,573 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:00,583 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:00,689 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:49:33] 2025-10-12 01:49:00,884 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:01,011 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:01,012 | INFO     | [job] validate thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:01,027 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:01,035 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:01,066 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:01,081 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:01,153 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:01,166 | INFO     | [job] control thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:04,723 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:49:33] 2025-10-12 01:49:19,855 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:49:33] 2025-10-12 01:49:20,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554949486400)>', '<ExcThread(monitor, started 140554474088192)>']
[2025-10-11 21:49:33] 2025-10-12 01:49:25,333 | INFO     | all workflow threads have been joined
[2025-10-11 21:49:33] 2025-10-12 01:49:25,333 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:49:33] 2025-10-12 01:49:25,334 | INFO     | traces error code: 0
[2025-10-11 21:49:33] 2025-10-12 01:49:25,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:49:33] 2025-10-12 01:49:30,645 | INFO     | PID=3656336 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:49:33] 2025-10-12 01:49:30,662 | INFO     | .. there are 51 such processes running
[2025-10-11 21:49:33] 2025-10-12 01:49:30,666 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:49:33] 2025-10-12 01:49:30,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:49:33] 2025-10-12 01:49:30,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:49:33] 2025-10-12 01:49:30,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:49:33] 2025-10-12 01:49:30,667 | INFO     | [monitor] control thread has ended
[2025-10-11 21:49:33] 2025-10-12 01:49:31,796 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:49:33] 2025-10-12 01:49:31,834 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:49:33] 2025-10-12 01:49:31,893 [wrapper] pilotpid: 3656336
[2025-10-11 21:49:33] 2025-10-12 01:49:31,915 [wrapper] Pilot exit status: 0
[2025-10-11 21:49:33] 2025-10-12 01:49:32,065 [wrapper] pandaids: 6838633989
[2025-10-11 21:49:33] 2025-10-12 01:49:32,811 [wrapper] cleanup supervisor_pilot 1129256 3656337
[2025-10-11 21:49:33] 2025-10-12 01:49:32,824 [wrapper] Test setup, not cleaning
[2025-10-11 21:49:33] 2025-10-12 01:49:32,867 [wrapper] apfmon messages muted
[2025-10-11 21:49:33] 2025-10-12 01:49:32,958 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:49:33] 2025-10-12 01:49:32,962 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:49:33]  *** Error codes and diagnostics ***
[2025-10-11 21:49:33]     "exeErrorCode": 0,
[2025-10-11 21:49:33]     "exeErrorDiag": "",
[2025-10-11 21:49:33]     "pilotErrorCode": 0,
[2025-10-11 21:49:33]     "pilotErrorDiag": "",
[2025-10-11 21:49:33]  *** Listing of results directory ***
[2025-10-11 21:49:33] total 406696
[2025-10-11 21:49:33] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 13:07 pilot3.tar.gz
[2025-10-11 21:49:33] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 13:13 queuedata.json
[2025-10-11 21:49:33] -rwx------. 1 boincer umatlas     36292 Oct 11 13:13 runpilot2-wrapper.sh
[2025-10-11 21:49:33] -rw-r--r--. 1 boincer umatlas       100 Oct 11 16:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:49:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 16:40 run_atlas
[2025-10-11 21:49:33] -rw-r--r--. 1 boincer umatlas       105 Oct 11 16:40 job.xml
[2025-10-11 21:49:33] -rw-r--r--. 2 boincer umatlas 219246705 Oct 11 16:40 EVNT.46676267._002470.pool.root.1
[2025-10-11 21:49:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:40 start_atlas.sh
[2025-10-11 21:49:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 16:40 shared
[2025-10-11 21:49:33] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 16:40 input.tar.gz
[2025-10-11 21:49:33] -rw-r--r--. 1 boincer umatlas         0 Oct 11 16:40 boinc_lockfile
[2025-10-11 21:49:33] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 16:40 pandaJob.out
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas    975528 Oct 11 16:40 agis_schedconf.cvmfs.json
[2025-10-11 21:49:33] drwx------. 5 boincer umatlas      4096 Oct 11 16:40 pilot3
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas 188222929 Oct 11 21:47 HITS.46676269._061509.pool.root.1
[2025-10-11 21:49:33] -rw-r--r--. 1 boincer umatlas       530 Oct 11 21:47 boinc_task_state.xml
[2025-10-11 21:49:33] -rw-r--r--. 1 boincer umatlas      6935 Oct 11 21:48 init_data.xml
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas      1046 Oct 11 21:48 memory_monitor_summary.json
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas   1560580 Oct 11 21:48 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas    489846 Oct 11 21:48 log.46676269._061509.job.log.tgz.1
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas      7800 Oct 11 21:48 heartbeat.json
[2025-10-11 21:49:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:49 boinc_mmap_file
[2025-10-11 21:49:33] -rw-r--r--. 1 boincer umatlas        28 Oct 11 21:49 wrapper_checkpoint.txt
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas        95 Oct 11 21:49 pilot_heartbeat.json
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas       823 Oct 11 21:49 pilotlog.txt
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas   2053528 Oct 11 21:49 log.46676269._061509.job.log.1
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas       357 Oct 11 21:49 output.list
[2025-10-11 21:49:33] -rw-r--r--. 1 boincer umatlas       620 Oct 11 21:49 runtime_log
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas   2560000 Oct 11 21:49 result.tar.gz
[2025-10-11 21:49:33] -rw-r--r--. 1 boincer umatlas      8699 Oct 11 21:49 runtime_log.err
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas       660 Oct 11 21:49 hMiNDm1KsR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmtHSMDmuYH8Wm.diag
[2025-10-11 21:49:33] -rw-r--r--. 1 boincer umatlas     21236 Oct 11 21:49 stderr.txt
[2025-10-11 21:49:33] HITS file was successfully produced:
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas 188222929 Oct 11 21:47 shared/HITS.pool.root.1
[2025-10-11 21:49:33]  *** Contents of shared directory: ***
[2025-10-11 21:49:33] total 401008
[2025-10-11 21:49:33] -rw-r--r--. 2 boincer umatlas 219246705 Oct 11 16:40 ATLAS.root_0
[2025-10-11 21:49:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:40 start_atlas.sh
[2025-10-11 21:49:33] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 16:40 input.tar.gz
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas 188222929 Oct 11 21:47 HITS.pool.root.1
[2025-10-11 21:49:33] -rw-------. 1 boincer umatlas   2560000 Oct 11 21:49 result.tar.gz
21:49:34 (3652322): run_atlas exited; CPU time 35006.754570
21:49:34 (3652322): called boinc_finish(0)

</stderr_txt>
]]>

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