Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:56:49 (1233179): wrapper (7.7.26015): starting
12:56:49 (1233179): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 12:56:49] Arguments: --nthreads 12
[2025-10-11 12:56:49] Threads: 12
[2025-10-11 12:56:49] Checking for CVMFS
[2025-10-11 12:56:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 12:56:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 12:56:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 12:56:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 12:56:51] 2.11.5.0 2572 30465 217712 151594 2 223 40705431 45568001 18169 130560 0 324063100 99.861 132187928 21613 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 12:56:51] CVMFS is ok
[2025-10-11 12:56:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 12:56:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 12:56:51] Further information can be found at the LHC@home message board.
[2025-10-11 12:56:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 12:56:51] Checking for apptainer binary...
[2025-10-11 12:56:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 12:56:51] Running /usr/bin/apptainer --version
[2025-10-11 12:56:51] apptainer version 1.4.1-1.el9
[2025-10-11 12:56:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 12:56:52] wns0095.triumf.lcg
[2025-10-11 12:56:52] apptainer works
[2025-10-11 12:56:52] Set ATHENA_PROC_NUMBER=12
[2025-10-11 12:56:52] Set ATHENA_CORE_NUMBER=12
[2025-10-11 12:56:52] Starting ATLAS job with PandaID=6838633986
[2025-10-11 12:56:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 13:02:43]  *** The last 200 lines of the pilot log: ***
[2025-10-11 13:02:43] 2025-10-11 20:02:09,688 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:02:43] 2025-10-11 20:02:09,688 | WARNING  | wrong length of table data, x=[1760212759.0], y=[2438.0] (must be same and length>=4)
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | could have reported an average CPU frequency of 2565 MHz (4 samples)
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | ..............................
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . Timing measurements:
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . get job = 0 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . initial setup = 3 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . payload setup = 33 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . stage-in = 0 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . payload execution = 55 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . stage-out = 0 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . log creation = 0 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | ..............................
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 13:02:43] 2025-10-11 20:02:09,690 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838633986/pilotlog.txt
[2025-10-11 13:02:43] 2025-10-11 20:02:09,703 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 13:02:43] - Log from pilotlog.txt -
[2025-10-11 13:02:43] 2025-10-11 20:02:09,687 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838633986/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 13:02:43] 2025-10-11 20:02:09,687 | INFO     | extracted standard info from prmon json
[2025-10-11 13:02:43] 2025-10-11 20:02:09,687 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 13:02:43] 2025-10-11 20:02:09,687 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 13:02:43] 2025-10-11 20:02:09,688 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 13:02:43] 2025-10-11 20:02:09,688 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:02:43] 2025-10-11 20:02:09,688 | WARNING  | wrong length of table data, x=[1760212759.0], y=[2438.0] (must be same and length>=4)
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | could have reported an average CPU frequency of 2565 MHz (4 samples)
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | ..............................
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . Timing measurements:
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . get job = 0 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . initial setup = 3 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . payload setup = 33 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . stage-in = 0 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . payload execution = 55 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . stage-out = 0 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . log creation = 0 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | ..............................
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 13:02:43] 2025-10-11 20:02:09,690 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838633986/pilotlog.txt
[2025-10-11 13:02:43] 2025-10-11 20:02:09,703 | WARNING  | 
[2025-10-11 13:02:43] [begin log extracts]
[2025-10-11 13:02:43] - Log from pilotlog.txt -
[2025-10-11 13:02:43] 2025-10-11 20:02:09,687 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838633986/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 13:02:43] 2025-10-11 20:02:09,687 | INFO     | extracted standard info from prmon json
[2025-10-11 13:02:43] 2025-10-11 20:02:09,687 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 13:02:43] 2025-10-11 20:02:09,687 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 13:02:43] 2025-10-11 20:02:09,688 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 13:02:43] 2025-10-11 20:02:09,688 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:02:43] 2025-10-11 20:02:09,688 | WARNING  | wrong length of table data, x=[1760212759.0], y=[2438.0] (must be same and length>=4)
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | could have reported an average CPU frequency of 2565 MHz (4 samples)
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | ..............................
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . Timing measurements:
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . get job = 0 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . initial setup = 3 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . payload setup = 33 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . stage-in = 0 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . payload execution = 55 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . stage-out = 0 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | . log creation = 0 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | ..............................
[2025-10-11 13:02:43] 2025-10-11 20:02:09,689 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 13:02:43] 2025-10-11 20:02:09,690 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838633986/pilotlog.txt
[2025-10-11 13:02:43] [end log extracts]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,704 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 13:02:43] 2025-10-11 20:02:09,706 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 13:02:43] 2025-10-11 20:02:09,789 | INFO     | 
[2025-10-11 13:02:43] 2025-10-11 20:02:09,789 | INFO     | job summary report
[2025-10-11 13:02:43] 2025-10-11 20:02:09,789 | INFO     | --------------------------------------------------
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | PanDA job id: 6838633986
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | task id: 46676269
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 12:59:43,606 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | pilot state: failed 
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | transexitcode: 65
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | exeerrorcode: 65
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | exitcode: 65
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | cpuconsumptiontime: 19 s
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | nevents: 0
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | neventsw: 0
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | pid: 1243785
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | pgrp: 1243785
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | corecount: 12
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | event service: False
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | sizes: {0: 2348627, 1: 2348882, 2: 2348910, 13: 2348910, 22: 2349228, 24: 2349256, 93: 2372714, 94: 2372690, 95: 2377010, 97: 2377038, 231: 2377204}
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | --------------------------------------------------
[2025-10-11 13:02:43] 2025-10-11 20:02:09,790 | INFO     | 
[2025-10-11 13:02:43] 2025-10-11 20:02:09,791 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 13:02:43] 2025-10-11 20:02:09,810 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,810 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,810 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,810 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,810 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | job 6838633986 has completed (purged errors)
[2025-10-11 13:02:43] 2025-10-11 20:02:09,811 | INFO     | overall cleanup function is called
[2025-10-11 13:02:43] 2025-10-11 20:02:10,677 | INFO     | PID=1236937 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 13:02:43] 2025-10-11 20:02:10,677 | INFO     | .. there are 35 such processes running
[2025-10-11 13:02:43] 2025-10-11 20:02:10,818 | INFO     | --- collectZombieJob: --- 10, [1243785]
[2025-10-11 13:02:43] 2025-10-11 20:02:10,818 | INFO     | zombie collector waiting for pid 1243785
[2025-10-11 13:02:43] 2025-10-11 20:02:10,818 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 13:02:43] 2025-10-11 20:02:10,818 | INFO     | collected zombie processes
[2025-10-11 13:02:43] 2025-10-11 20:02:10,818 | INFO     | will attempt to kill all subprocesses of pid=1243785
[2025-10-11 13:02:43] 2025-10-11 20:02:11,403 | INFO     | process IDs to be killed: [1243785] (in reverse order)
[2025-10-11 13:02:43] 2025-10-11 20:02:11,706 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 13:02:43] 2025-10-11 20:02:11,707 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 13:02:43] 2025-10-11 20:02:11,721 | INFO     | did not find any defunct processes belonging to 1243785
[2025-10-11 13:02:43] 2025-10-11 20:02:11,739 | INFO     | did not find any defunct processes belonging to 1243785
[2025-10-11 13:02:43] 2025-10-11 20:02:11,739 | INFO     | ready for new job
[2025-10-11 13:02:43] 2025-10-11 20:02:11,739 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 13:02:43] 2025-10-11 20:02:11,741 | INFO     | ***************************************
[2025-10-11 13:02:43] 2025-10-11 20:02:11,741 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 13:02:43] 2025-10-11 20:02:11,741 | INFO     | ***************************************
[2025-10-11 13:02:43] 2025-10-11 20:02:11,741 | INFO     | 
[2025-10-11 13:02:43] 2025-10-11 20:02:11,743 | INFO     | architecture information:
[2025-10-11 13:02:43] 2025-10-11 20:02:11,746 | INFO     | executing command: cat /etc/os-release
[2025-10-11 13:02:43] 2025-10-11 20:02:11,763 | INFO     | cat /etc/os-release:
[2025-10-11 13:02:43] NAME="CentOS Linux"
[2025-10-11 13:02:43] VERSION="7 (Core)"
[2025-10-11 13:02:43] ID="centos"
[2025-10-11 13:02:43] ID_LIKE="rhel fedora"
[2025-10-11 13:02:43] VERSION_ID="7"
[2025-10-11 13:02:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 13:02:43] ANSI_COLOR="0;31"
[2025-10-11 13:02:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 13:02:43] HOME_URL="https://www.centos.org/"
[2025-10-11 13:02:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 13:02:43] 
[2025-10-11 13:02:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 13:02:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 13:02:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 13:02:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 13:02:43] 
[2025-10-11 13:02:43] 2025-10-11 20:02:11,764 | INFO     | ***************************************
[2025-10-11 13:02:43] 2025-10-11 20:02:12,268 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 13:02:43] 2025-10-11 20:02:12,283 | INFO     | sufficient remaining disk space (2035831275520 B)
[2025-10-11 13:02:43] 2025-10-11 20:02:12,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 13:02:43] 2025-10-11 20:02:12,283 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 13:02:43] 2025-10-11 20:02:12,283 | INFO     | update_server=False
[2025-10-11 13:02:43] 2025-10-11 20:02:12,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 13:02:43] 2025-10-11 20:02:12,673 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 13:02:43] 2025-10-11 20:02:12,995 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 13:02:43] 2025-10-11 20:02:13,023 | INFO     | all data control threads have been joined
[2025-10-11 13:02:43] 2025-10-11 20:02:13,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:02:43] 2025-10-11 20:02:13,182 | INFO     | aborting loop
[2025-10-11 13:02:43] 2025-10-11 20:02:13,289 | INFO     | [job] retrieve thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:13,669 | INFO     | all payload control threads have been joined
[2025-10-11 13:02:43] 2025-10-11 20:02:13,744 | INFO     | [payload] failed_post thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:13,829 | INFO     | all job control threads have been joined
[2025-10-11 13:02:43] 2025-10-11 20:02:14,029 | INFO     | [data] control thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:14,151 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:14,188 | INFO     | [job] job monitor thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:14,255 | INFO     | [job] validate thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:14,471 | INFO     | [data] copytool_in thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:14,538 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:14,635 | INFO     | [payload] validate_post thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:14,675 | INFO     | [payload] control thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:14,686 | INFO     | [data] copytool_out thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:14,713 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:14,713 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:14,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:02:43] 2025-10-11 20:02:14,835 | INFO     | [job] control thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:15,816 | INFO     | [job] queue monitor thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:17,004 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 13:02:43] 2025-10-11 20:02:33,631 | INFO     | [monitor] cgroup control has ended
[2025-10-11 13:02:43] 2025-10-11 20:02:35,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139806818207552)>', '<ExcThread(monitor, started 139806497543936)>']
[2025-10-11 13:02:43] 2025-10-11 20:02:40,360 | INFO     | all workflow threads have been joined
[2025-10-11 13:02:43] 2025-10-11 20:02:40,360 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 13:02:43] 2025-10-11 20:02:40,360 | INFO     | traces error code: 0
[2025-10-11 13:02:43] 2025-10-11 20:02:40,360 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 13:02:43] 2025-10-11 20:02:43,115 | INFO     | PID=1236937 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 13:02:43] 2025-10-11 20:02:43,115 | INFO     | .. there are 35 such processes running
[2025-10-11 13:02:43] 2025-10-11 20:02:43,116 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 13:02:43] 2025-10-11 20:02:43,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 13:02:43] 2025-10-11 20:02:43,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 13:02:43] 2025-10-11 20:02:43,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 13:02:43] 2025-10-11 20:02:43,116 | INFO     | [monitor] control thread has ended
[2025-10-11 13:02:43] 2025-10-11 20:02:43,354 [wrapper] ==== pilot stdout END ====
[2025-10-11 13:02:43] 2025-10-11 20:02:43,380 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 13:02:43] 2025-10-11 20:02:43,411 [wrapper] pilotpid: 1236937
[2025-10-11 13:02:43] 2025-10-11 20:02:43,440 [wrapper] Pilot exit status: 0
[2025-10-11 13:02:43] 2025-10-11 20:02:43,523 [wrapper] pandaids: 6838633986
[2025-10-11 13:02:43] 2025-10-11 20:02:43,606 [wrapper] cleanup supervisor_pilot 1236943 1236938
[2025-10-11 13:02:43] 2025-10-11 20:02:43,609 [wrapper] Test setup, not cleaning
[2025-10-11 13:02:43] 2025-10-11 20:02:43,612 [wrapper] apfmon messages muted
[2025-10-11 13:02:43] 2025-10-11 20:02:43,615 [wrapper] ==== wrapper stdout END ====
[2025-10-11 13:02:43] 2025-10-11 20:02:43,616 [wrapper] ==== wrapper stderr END ====
[2025-10-11 13:02:43]  *** Error codes and diagnostics ***
[2025-10-11 13:02:43]     "exeErrorCode": 65,
[2025-10-11 13:02:43]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 13:02:43]     "pilotErrorCode": 1305,
[2025-10-11 13:02:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 13:02:43]  *** Listing of results directory ***
[2025-10-11 13:02:43] total 218148
[2025-10-11 13:02:43] -rw-r--r--. 1 boinc boinc    557409 Oct 11 10:07 pilot3.tar.gz
[2025-10-11 13:02:43] -rw-r--r--. 1 boinc boinc      5112 Oct 11 10:13 queuedata.json
[2025-10-11 13:02:43] -rwx------. 1 boinc boinc     36292 Oct 11 10:13 runpilot2-wrapper.sh
[2025-10-11 13:02:43] -rw-r--r--. 1 boinc boinc       100 Oct 11 12:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 13:02:43] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 12:56 run_atlas
[2025-10-11 13:02:43] -rw-r--r--. 1 boinc boinc       105 Oct 11 12:56 job.xml
[2025-10-11 13:02:43] -rw-r--r--. 2 boinc boinc 219246705 Oct 11 12:56 EVNT.46676267._002470.pool.root.1
[2025-10-11 13:02:43] -rw-r--r--. 1 boinc boinc      6594 Oct 11 12:56 init_data.xml
[2025-10-11 13:02:43] -rw-r--r--. 2 boinc boinc     15120 Oct 11 12:56 start_atlas.sh
[2025-10-11 13:02:43] drwxrwx--x. 2 boinc boinc      4096 Oct 11 12:56 shared
[2025-10-11 13:02:43] -rw-r--r--. 2 boinc boinc    569679 Oct 11 12:56 input.tar.gz
[2025-10-11 13:02:43] -rw-r--r--. 1 boinc boinc         0 Oct 11 12:56 boinc_lockfile
[2025-10-11 13:02:43] -rw-r--r--. 1 boinc boinc      2550 Oct 11 12:56 pandaJob.out
[2025-10-11 13:02:43] -rw-------. 1 boinc boinc    975512 Oct 11 12:57 agis_schedconf.cvmfs.json
[2025-10-11 13:02:43] -rw-------. 1 boinc boinc   1560580 Oct 11 12:57 agis_ddmendpoints.agis.ALL.json
[2025-10-11 13:02:43] drwx------. 5 boinc boinc      4096 Oct 11 12:57 pilot3
[2025-10-11 13:02:43] -rw-------. 1 boinc boinc       961 Oct 11 12:59 memory_monitor_summary.json
[2025-10-11 13:02:43] -rw-------. 1 boinc boinc     22752 Oct 11 12:59 log.46676269._061506.job.log.tgz.1
[2025-10-11 13:02:43] -rw-------. 1 boinc boinc      8399 Oct 11 13:02 heartbeat.json
[2025-10-11 13:02:43] -rw-r--r--. 1 boinc boinc       524 Oct 11 13:02 boinc_task_state.xml
[2025-10-11 13:02:43] -rw-r--r--. 1 boinc boinc      8192 Oct 11 13:02 boinc_mmap_file
[2025-10-11 13:02:43] -rw-r--r--. 1 boinc boinc        22 Oct 11 13:02 wrapper_checkpoint.txt
[2025-10-11 13:02:43] -rw-------. 1 boinc boinc        95 Oct 11 13:02 pilot_heartbeat.json
[2025-10-11 13:02:43] -rw-------. 1 boinc boinc       823 Oct 11 13:02 pilotlog.txt
[2025-10-11 13:02:43] -rw-------. 1 boinc boinc     95297 Oct 11 13:02 log.46676269._061506.job.log.1
[2025-10-11 13:02:43] -rw-------. 1 boinc boinc       188 Oct 11 13:02 output.list
[2025-10-11 13:02:43] -rw-r--r--. 1 boinc boinc       620 Oct 11 13:02 runtime_log
[2025-10-11 13:02:43] -rw-------. 1 boinc boinc    133120 Oct 11 13:02 result.tar.gz
[2025-10-11 13:02:43] -rw-r--r--. 1 boinc boinc      8528 Oct 11 13:02 runtime_log.err
[2025-10-11 13:02:43] -rw-------. 1 boinc boinc       644 Oct 11 13:02 bqdNDm1KsR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqHSMDmSHMjRn.diag
[2025-10-11 13:02:43] -rw-r--r--. 1 boinc boinc     21949 Oct 11 13:02 stderr.txt
[2025-10-11 13:02:43] No HITS result produced
[2025-10-11 13:02:43]  *** Contents of shared directory: ***
[2025-10-11 13:02:43] total 214824
[2025-10-11 13:02:43] -rw-r--r--. 2 boinc boinc 219246705 Oct 11 12:56 ATLAS.root_0
[2025-10-11 13:02:43] -rw-r--r--. 2 boinc boinc     15120 Oct 11 12:56 start_atlas.sh
[2025-10-11 13:02:43] -rw-r--r--. 2 boinc boinc    569679 Oct 11 12:56 input.tar.gz
[2025-10-11 13:02:43] -rw-------. 1 boinc boinc    133120 Oct 11 13:02 result.tar.gz
13:02:45 (1233179): run_atlas exited; CPU time 30.968420
13:02:45 (1233179): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN