Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:27:02 (812042): wrapper (7.7.26015): starting
12:27:02 (812042): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 12:27:02] Arguments: --nthreads 12
[2025-10-11 12:27:02] Threads: 12
[2025-10-11 12:27:02] Checking for CVMFS
[2025-10-11 12:27:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 12:27:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 12:27:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 12:27:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 12:27:07] 2.11.5.0 2127 28898 207036 151594 2 291 22888137 45568000 27850 130560 0 232399532 99.876 87855600 26282 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 12:27:07] CVMFS is ok
[2025-10-11 12:27:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 12:27:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 12:27:07] Further information can be found at the LHC@home message board.
[2025-10-11 12:27:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 12:27:07] Checking for apptainer binary...
[2025-10-11 12:27:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 12:27:07] Running /usr/bin/apptainer --version
[2025-10-11 12:27:08] apptainer version 1.4.1-1.el9
[2025-10-11 12:27:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 12:27:09] wns0041.triumf.lcg
[2025-10-11 12:27:09] apptainer works
[2025-10-11 12:27:09] Set ATHENA_PROC_NUMBER=12
[2025-10-11 12:27:09] Set ATHENA_CORE_NUMBER=12
[2025-10-11 12:27:09] Starting ATLAS job with PandaID=6838634035
[2025-10-11 12:27:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 12:35:35]  *** The last 200 lines of the pilot log: ***
[2025-10-11 12:35:35] 2025-10-11 19:35:00,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | WARNING  | wrong length of table data, x=[1760211092.0], y=[2051.0] (must be same and length>=4)
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | could have reported an average CPU frequency of 1379 MHz (4 samples)
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | ..............................
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | . Timing measurements:
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | . get job = 0 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | . initial setup = 4 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | . payload setup = 52 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,344 | INFO     | . stage-in = 0 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,344 | INFO     | . payload execution = 96 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,344 | INFO     | . stage-out = 2 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,364 | INFO     | . log creation = 0 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,364 | INFO     | ..............................
[2025-10-11 12:35:35] 2025-10-11 19:35:00,364 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 12:35:35] 2025-10-11 19:35:00,365 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838634035/pilotlog.txt
[2025-10-11 12:35:35] 2025-10-11 19:35:00,485 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 12:35:35] - Log from pilotlog.txt -
[2025-10-11 12:35:35] 2025-10-11 19:35:00,340 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838634035/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 12:35:35] 2025-10-11 19:35:00,341 | INFO     | extracted standard info from prmon json
[2025-10-11 12:35:35] 2025-10-11 19:35:00,342 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 12:35:35] 2025-10-11 19:35:00,342 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 12:35:35] 2025-10-11 19:35:00,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 12:35:35] 2025-10-11 19:35:00,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | WARNING  | wrong length of table data, x=[1760211092.0], y=[2051.0] (must be same and length>=4)
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | could have reported an average CPU frequency of 1379 MHz (4 samples)
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | ..............................
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | . Timing measurements:
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | . get job = 0 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | . initial setup = 4 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | . payload setup = 52 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,344 | INFO     | . stage-in = 0 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,344 | INFO     | . payload execution = 96 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,344 | INFO     | . stage-out = 2 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,364 | INFO     | . log creation = 0 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,364 | INFO     | ..............................
[2025-10-11 12:35:35] 2025-10-11 19:35:00,364 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 12:35:35] 2025-10-11 19:35:00,365 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838634035/pilotlog.txt
[2025-10-11 12:35:35] 2025-10-11 19:35:00,486 | WARNING  | 
[2025-10-11 12:35:35] [begin log extracts]
[2025-10-11 12:35:35] - Log from pilotlog.txt -
[2025-10-11 12:35:35] 2025-10-11 19:35:00,340 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838634035/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 12:35:35] 2025-10-11 19:35:00,341 | INFO     | extracted standard info from prmon json
[2025-10-11 12:35:35] 2025-10-11 19:35:00,342 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 12:35:35] 2025-10-11 19:35:00,342 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 12:35:35] 2025-10-11 19:35:00,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 12:35:35] 2025-10-11 19:35:00,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | WARNING  | wrong length of table data, x=[1760211092.0], y=[2051.0] (must be same and length>=4)
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | could have reported an average CPU frequency of 1379 MHz (4 samples)
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | ..............................
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | . Timing measurements:
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | . get job = 0 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | . initial setup = 4 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,343 | INFO     | . payload setup = 52 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,344 | INFO     | . stage-in = 0 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,344 | INFO     | . payload execution = 96 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,344 | INFO     | . stage-out = 2 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,364 | INFO     | . log creation = 0 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,364 | INFO     | ..............................
[2025-10-11 12:35:35] 2025-10-11 19:35:00,364 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 12:35:35] 2025-10-11 19:35:00,365 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838634035/pilotlog.txt
[2025-10-11 12:35:35] [end log extracts]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,486 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 12:35:35] 2025-10-11 19:35:00,487 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 12:35:35] 2025-10-11 19:35:00,820 | INFO     | 
[2025-10-11 12:35:35] 2025-10-11 19:35:00,820 | INFO     | job summary report
[2025-10-11 12:35:35] 2025-10-11 19:35:00,820 | INFO     | --------------------------------------------------
[2025-10-11 12:35:35] 2025-10-11 19:35:00,821 | INFO     | PanDA job id: 6838634035
[2025-10-11 12:35:35] 2025-10-11 19:35:00,821 | INFO     | task id: 46676269
[2025-10-11 12:35:35] 2025-10-11 19:35:00,821 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 12:32:09,146 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 12:35:35] 2025-10-11 19:35:00,821 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 12:35:35] 2025-10-11 19:35:00,821 | INFO     | pilot state: failed 
[2025-10-11 12:35:35] 2025-10-11 19:35:00,821 | INFO     | transexitcode: 65
[2025-10-11 12:35:35] 2025-10-11 19:35:00,821 | INFO     | exeerrorcode: 65
[2025-10-11 12:35:35] 2025-10-11 19:35:00,821 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 12:35:35] 2025-10-11 19:35:00,822 | INFO     | exitcode: 65
[2025-10-11 12:35:35] 2025-10-11 19:35:00,822 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 12:35:35] 2025-10-11 19:35:00,823 | INFO     | cpuconsumptiontime: 32 s
[2025-10-11 12:35:35] 2025-10-11 19:35:00,823 | INFO     | nevents: 0
[2025-10-11 12:35:35] 2025-10-11 19:35:00,823 | INFO     | neventsw: 0
[2025-10-11 12:35:35] 2025-10-11 19:35:00,823 | INFO     | pid: 823551
[2025-10-11 12:35:35] 2025-10-11 19:35:00,823 | INFO     | pgrp: 823551
[2025-10-11 12:35:35] 2025-10-11 19:35:00,823 | INFO     | corecount: 12
[2025-10-11 12:35:35] 2025-10-11 19:35:00,823 | INFO     | event service: False
[2025-10-11 12:35:35] 2025-10-11 19:35:00,823 | INFO     | sizes: {0: 2348627, 1: 2348711, 2: 2348711, 3: 2348910, 4: 2348938, 15: 2348966, 27: 2349122, 38: 2349150, 40: 2349440, 49: 2349468, 154: 2372781, 155: 2373037, 15
[2025-10-11 12:35:35] 2025-10-11 19:35:00,823 | INFO     | --------------------------------------------------
[2025-10-11 12:35:35] 2025-10-11 19:35:00,823 | INFO     | 
[2025-10-11 12:35:35] 2025-10-11 19:35:00,824 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 12:35:35] 2025-10-11 19:35:00,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,905 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,905 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,905 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,907 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,907 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 12:35:35] 2025-10-11 19:35:00,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,913 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 12:35:35] 2025-10-11 19:35:00,913 | INFO     | job 6838634035 has completed (purged errors)
[2025-10-11 12:35:35] 2025-10-11 19:35:00,914 | INFO     | overall cleanup function is called
[2025-10-11 12:35:35] 2025-10-11 19:35:01,921 | INFO     | --- collectZombieJob: --- 10, [823551]
[2025-10-11 12:35:35] 2025-10-11 19:35:01,921 | INFO     | zombie collector waiting for pid 823551
[2025-10-11 12:35:35] 2025-10-11 19:35:01,921 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 12:35:35] 2025-10-11 19:35:01,921 | INFO     | collected zombie processes
[2025-10-11 12:35:35] 2025-10-11 19:35:01,922 | INFO     | will attempt to kill all subprocesses of pid=823551
[2025-10-11 12:35:35] 2025-10-11 19:35:02,875 | INFO     | process IDs to be killed: [823551] (in reverse order)
[2025-10-11 12:35:35] 2025-10-11 19:35:03,786 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 12:35:35] 2025-10-11 19:35:03,787 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 12:35:35] 2025-10-11 19:35:03,860 | INFO     | did not find any defunct processes belonging to 823551
[2025-10-11 12:35:35] 2025-10-11 19:35:03,942 | INFO     | did not find any defunct processes belonging to 823551
[2025-10-11 12:35:35] 2025-10-11 19:35:03,943 | INFO     | ready for new job
[2025-10-11 12:35:35] 2025-10-11 19:35:03,943 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 12:35:35] 2025-10-11 19:35:03,945 | INFO     | ***************************************
[2025-10-11 12:35:35] 2025-10-11 19:35:03,945 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 12:35:35] 2025-10-11 19:35:03,945 | INFO     | ***************************************
[2025-10-11 12:35:35] 2025-10-11 19:35:03,945 | INFO     | 
[2025-10-11 12:35:35] 2025-10-11 19:35:03,966 | INFO     | architecture information:
[2025-10-11 12:35:35] 2025-10-11 19:35:03,971 | INFO     | executing command: cat /etc/os-release
[2025-10-11 12:35:35] 2025-10-11 19:35:04,057 | INFO     | cat /etc/os-release:
[2025-10-11 12:35:35] NAME="CentOS Linux"
[2025-10-11 12:35:35] VERSION="7 (Core)"
[2025-10-11 12:35:35] ID="centos"
[2025-10-11 12:35:35] ID_LIKE="rhel fedora"
[2025-10-11 12:35:35] VERSION_ID="7"
[2025-10-11 12:35:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 12:35:35] ANSI_COLOR="0;31"
[2025-10-11 12:35:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 12:35:35] HOME_URL="https://www.centos.org/"
[2025-10-11 12:35:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 12:35:35] 
[2025-10-11 12:35:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 12:35:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 12:35:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 12:35:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 12:35:35] 
[2025-10-11 12:35:35] 2025-10-11 19:35:04,058 | INFO     | ***************************************
[2025-10-11 12:35:35] 2025-10-11 19:35:04,561 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 12:35:35] 2025-10-11 19:35:04,670 | INFO     | sufficient remaining disk space (1791846514688 B)
[2025-10-11 12:35:35] 2025-10-11 19:35:04,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 12:35:35] 2025-10-11 19:35:04,670 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 12:35:35] 2025-10-11 19:35:04,671 | INFO     | update_server=False
[2025-10-11 12:35:35] 2025-10-11 19:35:04,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 12:35:35] 2025-10-11 19:35:04,671 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 12:35:35] 2025-10-11 19:35:04,880 | INFO     | all payload control threads have been joined
[2025-10-11 12:35:35] 2025-10-11 19:35:05,077 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 12:35:35] 2025-10-11 19:35:05,077 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 12:35:35] 2025-10-11 19:35:05,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:35:35] 2025-10-11 19:35:05,078 | INFO     | will abort loop
[2025-10-11 12:35:35] 2025-10-11 19:35:05,501 | INFO     | all job control threads have been joined
[2025-10-11 12:35:35] 2025-10-11 19:35:05,686 | INFO     | [job] retrieve thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:05,688 | INFO     | [data] copytool_in thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:05,700 | INFO     | all data control threads have been joined
[2025-10-11 12:35:35] 2025-10-11 19:35:05,808 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:05,833 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 12:35:35] 2025-10-11 19:35:05,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:35:35] 2025-10-11 19:35:05,836 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:05,837 | INFO     | [job] validate thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:05,886 | INFO     | [payload] control thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:06,091 | INFO     | [job] job monitor thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:06,218 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:06,504 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:06,507 | INFO     | [job] control thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:06,508 | INFO     | [payload] validate_post thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:06,678 | INFO     | [data] copytool_out thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:06,706 | INFO     | [data] control thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:06,844 | INFO     | [job] queue monitor thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:06,979 | INFO     | [payload] failed_post thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:09,842 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 12:35:35] 2025-10-11 19:35:22,602 | INFO     | [monitor] cgroup control has ended
[2025-10-11 12:35:35] 2025-10-11 19:35:24,594 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140333503203136)>', '<ExcThread(monitor, started 140333174195968)>']
[2025-10-11 12:35:35] 2025-10-11 19:35:29,620 | INFO     | all workflow threads have been joined
[2025-10-11 12:35:35] 2025-10-11 19:35:29,621 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 12:35:35] 2025-10-11 19:35:29,621 | INFO     | traces error code: 0
[2025-10-11 12:35:35] 2025-10-11 19:35:29,622 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 12:35:35] 2025-10-11 19:35:33,374 | INFO     | PID=816073 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 12:35:35] 2025-10-11 19:35:33,374 | INFO     | .. there are 42 such processes running
[2025-10-11 12:35:35] 2025-10-11 19:35:33,375 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 12:35:35] 2025-10-11 19:35:33,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 12:35:35] 2025-10-11 19:35:33,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 12:35:35] 2025-10-11 19:35:33,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 12:35:35] 2025-10-11 19:35:33,376 | INFO     | [monitor] control thread has ended
[2025-10-11 12:35:35] 2025-10-11 19:35:34,259 [wrapper] ==== pilot stdout END ====
[2025-10-11 12:35:35] 2025-10-11 19:35:34,263 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 12:35:35] 2025-10-11 19:35:34,268 [wrapper] pilotpid: 816073
[2025-10-11 12:35:35] 2025-10-11 19:35:34,271 [wrapper] Pilot exit status: 0
[2025-10-11 12:35:35] 2025-10-11 19:35:34,316 [wrapper] pandaids: 6838634035
[2025-10-11 12:35:35] 2025-10-11 19:35:34,768 [wrapper] cleanup supervisor_pilot  816081 816074
[2025-10-11 12:35:35] 2025-10-11 19:35:34,815 [wrapper] Test setup, not cleaning
[2025-10-11 12:35:35] 2025-10-11 19:35:34,831 [wrapper] apfmon messages muted
[2025-10-11 12:35:35] 2025-10-11 19:35:34,861 [wrapper] ==== wrapper stdout END ====
[2025-10-11 12:35:35] 2025-10-11 19:35:34,887 [wrapper] ==== wrapper stderr END ====
[2025-10-11 12:35:35]  *** Error codes and diagnostics ***
[2025-10-11 12:35:35]     "exeErrorCode": 65,
[2025-10-11 12:35:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 12:35:35]     "pilotErrorCode": 1305,
[2025-10-11 12:35:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 12:35:35]  *** Listing of results directory ***
[2025-10-11 12:35:35] total 220748
[2025-10-11 12:35:35] -rw-r--r--. 1 boinc boinc    557409 Oct 11 10:07 pilot3.tar.gz
[2025-10-11 12:35:35] -rw-r--r--. 1 boinc boinc      5112 Oct 11 10:13 queuedata.json
[2025-10-11 12:35:35] -rwx------. 1 boinc boinc     36292 Oct 11 10:13 runpilot2-wrapper.sh
[2025-10-11 12:35:35] -rw-r--r--. 1 boinc boinc       100 Oct 11 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 12:35:35] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 12:27 run_atlas
[2025-10-11 12:35:35] -rw-r--r--. 1 boinc boinc       105 Oct 11 12:27 job.xml
[2025-10-11 12:35:35] -rw-r--r--. 1 boinc boinc      6594 Oct 11 12:27 init_data.xml
[2025-10-11 12:35:35] -rw-r--r--. 2 boinc boinc 221895092 Oct 11 12:27 EVNT.46676267._002472.pool.root.1
[2025-10-11 12:35:35] -rw-r--r--. 2 boinc boinc     15120 Oct 11 12:27 start_atlas.sh
[2025-10-11 12:35:35] drwxrwx--x. 2 boinc boinc      4096 Oct 11 12:27 shared
[2025-10-11 12:35:35] -rw-r--r--. 2 boinc boinc    569682 Oct 11 12:27 input.tar.gz
[2025-10-11 12:35:35] -rw-r--r--. 1 boinc boinc         0 Oct 11 12:27 boinc_lockfile
[2025-10-11 12:35:35] -rw-r--r--. 1 boinc boinc      2550 Oct 11 12:27 pandaJob.out
[2025-10-11 12:35:35] -rw-------. 1 boinc boinc    975512 Oct 11 12:28 agis_schedconf.cvmfs.json
[2025-10-11 12:35:35] -rw-------. 1 boinc boinc   1560580 Oct 11 12:28 agis_ddmendpoints.agis.ALL.json
[2025-10-11 12:35:35] drwx------. 5 boinc boinc      4096 Oct 11 12:28 pilot3
[2025-10-11 12:35:35] -rw-------. 1 boinc boinc       965 Oct 11 12:32 memory_monitor_summary.json
[2025-10-11 12:35:35] -rw-------. 1 boinc boinc     22550 Oct 11 12:32 log.46676269._061555.job.log.tgz.1
[2025-10-11 12:35:35] -rw-------. 1 boinc boinc      8410 Oct 11 12:35 heartbeat.json
[2025-10-11 12:35:35] -rw-r--r--. 1 boinc boinc      8192 Oct 11 12:35 boinc_mmap_file
[2025-10-11 12:35:35] -rw-r--r--. 1 boinc boinc        23 Oct 11 12:35 wrapper_checkpoint.txt
[2025-10-11 12:35:35] -rw-------. 1 boinc boinc        95 Oct 11 12:35 pilot_heartbeat.json
[2025-10-11 12:35:35] -rw-------. 1 boinc boinc       822 Oct 11 12:35 pilotlog.txt
[2025-10-11 12:35:35] -rw-r--r--. 1 boinc boinc       524 Oct 11 12:35 boinc_task_state.xml
[2025-10-11 12:35:35] -rw-------. 1 boinc boinc    103539 Oct 11 12:35 log.46676269._061555.job.log.1
[2025-10-11 12:35:35] -rw-------. 1 boinc boinc       188 Oct 11 12:35 output.list
[2025-10-11 12:35:35] -rw-r--r--. 1 boinc boinc       620 Oct 11 12:35 runtime_log
[2025-10-11 12:35:35] -rw-------. 1 boinc boinc    143360 Oct 11 12:35 result.tar.gz
[2025-10-11 12:35:35] -rw-r--r--. 1 boinc boinc      8528 Oct 11 12:35 runtime_log.err
[2025-10-11 12:35:35] -rw-------. 1 boinc boinc       645 Oct 11 12:35 dFrKDm2KsR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmHISMDmdDFp5m.diag
[2025-10-11 12:35:35] -rw-r--r--. 1 boinc boinc     21860 Oct 11 12:35 stderr.txt
[2025-10-11 12:35:35] No HITS result produced
[2025-10-11 12:35:35]  *** Contents of shared directory: ***
[2025-10-11 12:35:35] total 217416
[2025-10-11 12:35:35] -rw-r--r--. 2 boinc boinc 221895092 Oct 11 12:27 ATLAS.root_0
[2025-10-11 12:35:35] -rw-r--r--. 2 boinc boinc     15120 Oct 11 12:27 start_atlas.sh
[2025-10-11 12:35:35] -rw-r--r--. 2 boinc boinc    569682 Oct 11 12:27 input.tar.gz
[2025-10-11 12:35:35] -rw-------. 1 boinc boinc    143360 Oct 11 12:35 result.tar.gz
12:35:37 (812042): run_atlas exited; CPU time 51.018641
12:35:37 (812042): called boinc_finish(0)

</stderr_txt>
]]>

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