Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:07:28 (3343767): wrapper (7.7.26015): starting
16:07:28 (3343767): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 16:07:28] Arguments: --nthreads 8
[2025-10-11 16:07:28] Threads: 8
[2025-10-11 16:07:28] Checking for CVMFS
[2025-10-11 16:07:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:07:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:07:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:07:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:07:33] 2.13.2.0 7655 56307 385452 151594 1 625 22660756 32935937 33712 16776704 10 88091665 99.527 111176790 8812 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 16:07:33] CVMFS is ok
[2025-10-11 16:07:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:07:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:07:33] Further information can be found at the LHC@home message board.
[2025-10-11 16:07:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:07:33] Checking for apptainer binary...
[2025-10-11 16:07:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:07:33] Running /usr/bin/apptainer --version
[2025-10-11 16:07:34] apptainer version 1.4.3-1.el9
[2025-10-11 16:07:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:07:36] c6-12-25-4.aglt2.org
[2025-10-11 16:07:36] apptainer works
[2025-10-11 16:07:36] Set ATHENA_PROC_NUMBER=8
[2025-10-11 16:07:36] Set ATHENA_CORE_NUMBER=8
[2025-10-11 16:07:36] Starting ATLAS job with PandaID=6838453359
[2025-10-11 16:07:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:39:53]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:39:53] 2025-10-12 21:39:00,267 | INFO     | time since job start (91756s) is within the limit (172800.0s)
[2025-10-12 17:39:53] 2025-10-12 21:39:00,330 | INFO     | sum of deviations: 1304472131879.98
[2025-10-12 17:39:53] 2025-10-12 21:39:00,353 | INFO     | mean x: 1760259331.3155437
[2025-10-12 17:39:53] 2025-10-12 21:39:00,354 | INFO     | mean y: 2083438.3742494998
[2025-10-12 17:39:53] 2025-10-12 21:39:00,354 | INFO     | -- intersect: -2196430055.990826
[2025-10-12 17:39:53] 2025-10-12 21:39:00,354 | INFO     | intersect: -2196430055.990826
[2025-10-12 17:39:53] 2025-10-12 21:39:00,383 | INFO     | chi2: 11.262019858610666
[2025-10-12 17:39:53] 2025-10-12 21:39:00,435 | INFO     | sum of square deviations: 1034021154191.2047
[2025-10-12 17:39:53] 2025-10-12 21:39:01,126 | INFO     | sum of deviations: 1729076921329.2444
[2025-10-12 17:39:53] 2025-10-12 21:39:01,127 | INFO     | mean x: 1760259178.819277
[2025-10-12 17:39:53] 2025-10-12 21:39:01,136 | INFO     | mean y: 2089655.0749665329
[2025-10-12 17:39:53] 2025-10-12 21:39:01,137 | INFO     | -- intersect: -2941393183.0832667
[2025-10-12 17:39:53] 2025-10-12 21:39:01,137 | INFO     | intersect: -2941393183.0832667
[2025-10-12 17:39:53] 2025-10-12 21:39:01,155 | INFO     | chi2: 7.265599964979489
[2025-10-12 17:39:53] 2025-10-12 21:39:01,164 | INFO     | current chi2=7.265599964979489 (change=35.48581820849491 %)
[2025-10-12 17:39:53] 2025-10-12 21:39:01,188 | INFO     | sum of square deviations: 1023673703776.0132
[2025-10-12 17:39:53] 2025-10-12 21:39:01,536 | INFO     | sum of deviations: 1739197843574.928
[2025-10-12 17:39:53] 2025-10-12 21:39:01,542 | INFO     | mean x: 1760259026.3163197
[2025-10-12 17:39:53] 2025-10-12 21:39:01,543 | INFO     | mean y: 2089804.0235057084
[2025-10-12 17:39:53] 2025-10-12 21:39:01,543 | INFO     | -- intersect: -2988549392.245728
[2025-10-12 17:39:53] 2025-10-12 21:39:01,543 | INFO     | intersect: -2988549392.245728
[2025-10-12 17:39:53] 2025-10-12 21:39:01,553 | INFO     | chi2: 7.25142390865536
[2025-10-12 17:39:53] 2025-10-12 21:39:01,556 | INFO     | current chi2=7.25142390865536 (change=0.19511198514174383 %)
[2025-10-12 17:39:53] 2025-10-12 21:39:01,557 | INFO     | right removable region: 1488
[2025-10-12 17:39:53] 2025-10-12 21:39:01,567 | INFO     | sum of square deviations: 1034020042830.566
[2025-10-12 17:39:53] 2025-10-12 21:39:02,009 | INFO     | sum of deviations: 911128843768.3481
[2025-10-12 17:39:53] 2025-10-12 21:39:02,010 | INFO     | mean x: 1760259483.8199465
[2025-10-12 17:39:53] 2025-10-12 21:39:02,011 | INFO     | mean y: 2089195.3507362783
[2025-10-12 17:39:53] 2025-10-12 21:39:02,011 | INFO     | -- intersect: -1548966994.851119
[2025-10-12 17:39:53] 2025-10-12 21:39:02,011 | INFO     | intersect: -1548966994.851119
[2025-10-12 17:39:53] 2025-10-12 21:39:02,023 | INFO     | chi2: 7.7599273247211125
[2025-10-12 17:39:53] 2025-10-12 21:39:02,024 | INFO     | current chi2=7.7599273247211125 (change=31.096486934463524 %)
[2025-10-12 17:39:53] 2025-10-12 21:39:02,045 | INFO     | sum of square deviations: 1023672664461.2662
[2025-10-12 17:39:53] 2025-10-12 21:39:02,265 | INFO     | monitor loop #3194: job 0:6838453359 is in state 'finished'
[2025-10-12 17:39:53] 2025-10-12 21:39:02,266 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:39:53] 2025-10-12 21:39:02,359 | INFO     | time since job start (91758s) is within the limit (172800.0s)
[2025-10-12 17:39:53] 2025-10-12 21:39:02,499 | INFO     | sum of deviations: 643541670085.5314
[2025-10-12 17:39:53] 2025-10-12 21:39:02,499 | INFO     | mean x: 1760259636.322364
[2025-10-12 17:39:53] 2025-10-12 21:39:02,500 | INFO     | mean y: 2093138.5426460712
[2025-10-12 17:39:53] 2025-10-12 21:39:02,500 | INFO     | -- intersect: -1104511018.6946766
[2025-10-12 17:39:53] 2025-10-12 21:39:02,500 | INFO     | intersect: -1104511018.6946766
[2025-10-12 17:39:53] 2025-10-12 21:39:02,530 | INFO     | chi2: 6.202083737662432
[2025-10-12 17:39:53] 2025-10-12 21:39:02,531 | INFO     | current chi2=6.202083737662432 (change=20.075491971371896 %)
[2025-10-12 17:39:53] 2025-10-12 21:39:02,531 | INFO     | left removable region: 20
[2025-10-12 17:39:53] 2025-10-12 21:39:02,554 | INFO     | sum of square deviations: 980967946387.4257
[2025-10-12 17:39:53] 2025-10-12 21:39:02,691 | INFO     | sum of deviations: 772807507099.7264
[2025-10-12 17:39:53] 2025-10-12 21:39:02,692 | INFO     | mean x: 1760259605.8297002
[2025-10-12 17:39:53] 2025-10-12 21:39:02,692 | INFO     | mean y: 2104194.1989100818
[2025-10-12 17:39:53] 2025-10-12 21:39:02,692 | INFO     | -- intersect: -1384630043.9984522
[2025-10-12 17:39:53] 2025-10-12 21:39:02,693 | INFO     | intersect: -1384630043.9984522
[2025-10-12 17:39:53] 2025-10-12 21:39:02,697 | INFO     | chi2: 1.1305571397449568
[2025-10-12 17:39:53] 2025-10-12 21:39:02,698 | INFO     | -- intersect: -1384630043.9984522
[2025-10-12 17:39:53] 2025-10-12 21:39:02,698 | INFO     | current memory leak: 0.79 B/s (using 1468 data points, chi2=1.13)
[2025-10-12 17:39:53] 2025-10-12 21:39:02,704 | INFO     | could have reported an average CPU frequency of 999 MHz (52 samples)
[2025-10-12 17:39:53] 2025-10-12 21:39:02,705 | INFO     | ..............................
[2025-10-12 17:39:53] 2025-10-12 21:39:02,705 | INFO     | . Timing measurements:
[2025-10-12 17:39:53] 2025-10-12 21:39:02,706 | INFO     | . get job = 2 s
[2025-10-12 17:39:53] 2025-10-12 21:39:02,706 | INFO     | . initial setup = 7 s
[2025-10-12 17:39:53] 2025-10-12 21:39:02,706 | INFO     | . payload setup = 75 s
[2025-10-12 17:39:53] 2025-10-12 21:39:02,706 | INFO     | . stage-in = 3 s
[2025-10-12 17:39:53] 2025-10-12 21:39:02,707 | INFO     | . payload execution = 91462 s
[2025-10-12 17:39:53] 2025-10-12 21:39:02,707 | INFO     | . stage-out = 11 s
[2025-10-12 17:39:53] 2025-10-12 21:39:02,707 | INFO     | . log creation = 2 s
[2025-10-12 17:39:53] 2025-10-12 21:39:02,707 | INFO     | ..............................
[2025-10-12 17:39:53] 2025-10-12 21:39:03,402 | INFO     | 
[2025-10-12 17:39:53] 2025-10-12 21:39:03,402 | INFO     | job summary report
[2025-10-12 17:39:53] 2025-10-12 21:39:03,402 | INFO     | --------------------------------------------------
[2025-10-12 17:39:53] 2025-10-12 21:39:03,403 | INFO     | PanDA job id: 6838453359
[2025-10-12 17:39:53] 2025-10-12 21:39:03,403 | INFO     | task id: 46676269
[2025-10-12 17:39:53] 2025-10-12 21:39:03,403 | INFO     | errors: (none)
[2025-10-12 17:39:53] 2025-10-12 21:39:03,403 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:39:53] 2025-10-12 21:39:03,404 | INFO     | pilot state: finished 
[2025-10-12 17:39:53] 2025-10-12 21:39:03,404 | INFO     | transexitcode: 0
[2025-10-12 17:39:53] 2025-10-12 21:39:03,404 | INFO     | exeerrorcode: 0
[2025-10-12 17:39:53] 2025-10-12 21:39:03,404 | INFO     | exeerrordiag: 
[2025-10-12 17:39:53] 2025-10-12 21:39:03,404 | INFO     | exitcode: 0
[2025-10-12 17:39:53] 2025-10-12 21:39:03,405 | INFO     | exitmsg: OK
[2025-10-12 17:39:53] 2025-10-12 21:39:03,405 | INFO     | cpuconsumptiontime: 120314 s
[2025-10-12 17:39:53] 2025-10-12 21:39:03,405 | INFO     | nevents: 400
[2025-10-12 17:39:53] 2025-10-12 21:39:03,405 | INFO     | neventsw: 0
[2025-10-12 17:39:53] 2025-10-12 21:39:03,405 | INFO     | pid: 3370408
[2025-10-12 17:39:53] 2025-10-12 21:39:03,406 | INFO     | pgrp: 3370408
[2025-10-12 17:39:53] 2025-10-12 21:39:03,406 | INFO     | corecount: 8
[2025-10-12 17:39:53] 2025-10-12 21:39:03,406 | INFO     | event service: False
[2025-10-12 17:39:53] 2025-10-12 21:39:03,406 | INFO     | sizes: {0: 2348029, 3: 2348630, 4: 2348714, 5: 2348798, 6: 2348798, 8: 2348969, 9: 2349125, 22: 2349153, 34: 2349181, 46: 2349209, 62: 2349209, 64: 2349779, 73: 23
[2025-10-12 17:39:53] 2025-10-12 21:39:03,406 | INFO     | --------------------------------------------------
[2025-10-12 17:39:53] 2025-10-12 21:39:03,407 | INFO     | 
[2025-10-12 17:39:53] 2025-10-12 21:39:03,407 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 17:39:53] 2025-10-12 21:39:03,575 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,576 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,576 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,576 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,577 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,577 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,577 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,584 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:39:53] 2025-10-12 21:39:03,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,584 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:39:53] 2025-10-12 21:39:03,585 | INFO     | job 6838453359 has completed (purged errors)
[2025-10-12 17:39:53] 2025-10-12 21:39:03,585 | INFO     | overall cleanup function is called
[2025-10-12 17:39:53] 2025-10-12 21:39:04,606 | INFO     | --- collectZombieJob: --- 10, [3370408]
[2025-10-12 17:39:53] 2025-10-12 21:39:04,607 | INFO     | zombie collector waiting for pid 3370408
[2025-10-12 17:39:53] 2025-10-12 21:39:04,607 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:39:53] 2025-10-12 21:39:04,608 | INFO     | collected zombie processes
[2025-10-12 17:39:53] 2025-10-12 21:39:04,608 | INFO     | will attempt to kill all subprocesses of pid=3370408
[2025-10-12 17:39:53] 2025-10-12 21:39:09,051 | INFO     | process IDs to be killed: [3370408] (in reverse order)
[2025-10-12 17:39:53] 2025-10-12 21:39:09,619 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:39:53] 2025-10-12 21:39:09,620 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:39:53] 2025-10-12 21:39:09,894 | INFO     | did not find any defunct processes belonging to 3370408
[2025-10-12 17:39:53] 2025-10-12 21:39:10,201 | INFO     | did not find any defunct processes belonging to 3370408
[2025-10-12 17:39:53] 2025-10-12 21:39:10,202 | INFO     | ready for new job
[2025-10-12 17:39:53] 2025-10-12 21:39:10,202 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:39:53] 2025-10-12 21:39:10,259 | INFO     | ***************************************
[2025-10-12 17:39:53] 2025-10-12 21:39:10,278 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:39:53] 2025-10-12 21:39:10,279 | INFO     | ***************************************
[2025-10-12 17:39:53] 2025-10-12 21:39:10,279 | INFO     | 
[2025-10-12 17:39:53] 2025-10-12 21:39:10,383 | INFO     | architecture information:
[2025-10-12 17:39:53] 2025-10-12 21:39:10,402 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:39:53] 2025-10-12 21:39:10,733 | INFO     | cat /etc/os-release:
[2025-10-12 17:39:53] NAME="CentOS Linux"
[2025-10-12 17:39:53] VERSION="7 (Core)"
[2025-10-12 17:39:53] ID="centos"
[2025-10-12 17:39:53] ID_LIKE="rhel fedora"
[2025-10-12 17:39:53] VERSION_ID="7"
[2025-10-12 17:39:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:39:53] ANSI_COLOR="0;31"
[2025-10-12 17:39:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:39:53] HOME_URL="https://www.centos.org/"
[2025-10-12 17:39:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:39:53] 
[2025-10-12 17:39:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:39:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:39:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:39:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:39:53] 
[2025-10-12 17:39:53] 2025-10-12 21:39:10,734 | INFO     | ***************************************
[2025-10-12 17:39:53] 2025-10-12 21:39:11,241 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 17:39:53] 2025-10-12 21:39:11,408 | INFO     | sufficient remaining disk space (93977575424 B)
[2025-10-12 17:39:53] 2025-10-12 21:39:11,427 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:39:53] 2025-10-12 21:39:11,427 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:39:53] 2025-10-12 21:39:11,428 | INFO     | update_server=False
[2025-10-12 17:39:53] 2025-10-12 21:39:11,428 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:39:53] 2025-10-12 21:39:11,428 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:39:53] 2025-10-12 21:39:11,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:39:53] 2025-10-12 21:39:11,435 | INFO     | aborting loop
[2025-10-12 17:39:53] 2025-10-12 21:39:11,548 | INFO     | all payload control threads have been joined
[2025-10-12 17:39:53] 2025-10-12 21:39:12,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:39:53] 2025-10-12 21:39:12,398 | INFO     | all data control threads have been joined
[2025-10-12 17:39:53] 2025-10-12 21:39:12,436 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:12,442 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:12,553 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:39:53] 2025-10-12 21:39:12,578 | INFO     | [payload] control thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:12,791 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:12,800 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:12,807 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:12,815 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:12,921 | INFO     | all job control threads have been joined
[2025-10-12 17:39:53] 2025-10-12 21:39:13,224 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:13,377 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:13,405 | INFO     | [data] control thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:13,425 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:13,560 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:13,737 | INFO     | [job] validate thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:13,928 | INFO     | [job] control thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:14,326 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:15,466 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:39:53] 2025-10-12 21:39:40,896 | INFO     | PID=3351958 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 17:39:53] 2025-10-12 21:39:40,896 | INFO     | .. there are 36 such processes running
[2025-10-12 17:39:53] 2025-10-12 21:39:40,898 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:39:53] 2025-10-12 21:39:40,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:39:53] 2025-10-12 21:39:40,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:39:53] 2025-10-12 21:39:43,526 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:39:53] 2025-10-12 21:39:43,703 [wrapper] supervise_pilot (15 min periods counter: 103)
[2025-10-12 17:39:53] 2025-10-12 21:39:45,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140267336922944)>', '<ExcThread(monitor, started 140266677708544)>']
[2025-10-12 17:39:53] 2025-10-12 21:39:45,928 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:39:53] 2025-10-12 21:39:45,929 | INFO     | [monitor] control thread has ended
[2025-10-12 17:39:53] 2025-10-12 21:39:50,168 | INFO     | all workflow threads have been joined
[2025-10-12 17:39:53] 2025-10-12 21:39:50,169 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:39:53] 2025-10-12 21:39:50,176 | INFO     | traces error code: 0
[2025-10-12 17:39:53] 2025-10-12 21:39:50,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:39:53] 2025-10-12 21:39:50,817 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:39:53] 2025-10-12 21:39:50,877 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:39:53] 2025-10-12 21:39:50,946 [wrapper] pilotpid: 3351958
[2025-10-12 17:39:53] 2025-10-12 21:39:50,957 [wrapper] Pilot exit status: 0
[2025-10-12 17:39:53] 2025-10-12 21:39:51,240 [wrapper] pandaids: 6838453359
[2025-10-12 17:39:53] 2025-10-12 21:39:52,742 [wrapper] cleanup supervisor_pilot 3041339 3351959
[2025-10-12 17:39:53] 2025-10-12 21:39:52,795 [wrapper] Test setup, not cleaning
[2025-10-12 17:39:53] 2025-10-12 21:39:52,967 [wrapper] apfmon messages muted
[2025-10-12 17:39:53] 2025-10-12 21:39:53,008 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:39:53] 2025-10-12 21:39:53,032 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:39:53]  *** Error codes and diagnostics ***
[2025-10-12 17:39:53]     "exeErrorCode": 0,
[2025-10-12 17:39:53]     "exeErrorDiag": "",
[2025-10-12 17:39:53]     "pilotErrorCode": 0,
[2025-10-12 17:39:53]     "pilotErrorDiag": "",
[2025-10-12 17:39:53]  *** Listing of results directory ***
[2025-10-12 17:39:54] total 430940
[2025-10-12 17:39:54] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 10:01 pilot3.tar.gz
[2025-10-12 17:39:54] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 10:19 queuedata.json
[2025-10-12 17:39:54] -rwx------. 1 boincer umatlas     36292 Oct 11 10:19 runpilot2-wrapper.sh
[2025-10-12 17:39:54] -rw-r--r--. 1 boincer umatlas       100 Oct 11 16:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:39:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 16:07 run_atlas
[2025-10-12 17:39:54] -rw-r--r--. 1 boincer umatlas       105 Oct 11 16:07 job.xml
[2025-10-12 17:39:54] -rw-r--r--. 2 boincer umatlas 219298921 Oct 11 16:07 EVNT.46676267._002379.pool.root.1
[2025-10-12 17:39:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:07 start_atlas.sh
[2025-10-12 17:39:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 16:07 shared
[2025-10-12 17:39:54] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 16:07 input.tar.gz
[2025-10-12 17:39:54] -rw-r--r--. 1 boincer umatlas         0 Oct 11 16:07 boinc_lockfile
[2025-10-12 17:39:54] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 16:07 pandaJob.out
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas    975512 Oct 11 16:09 agis_schedconf.cvmfs.json
[2025-10-12 17:39:54] drwx------. 5 boincer umatlas      4096 Oct 11 16:09 pilot3
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas 199398736 Oct 12 17:32 HITS.46676269._059215.pool.root.1
[2025-10-12 17:39:54] -rw-r--r--. 1 boincer umatlas       532 Oct 12 17:33 boinc_task_state.xml
[2025-10-12 17:39:54] -rw-r--r--. 1 boincer umatlas      6859 Oct 12 17:36 init_data.xml
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas      1053 Oct 12 17:37 memory_monitor_summary.json
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas   1560580 Oct 12 17:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas   1234139 Oct 12 17:37 log.46676269._059215.job.log.tgz.1
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas      7864 Oct 12 17:39 heartbeat.json
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas        95 Oct 12 17:39 pilot_heartbeat.json
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas      4824 Oct 12 17:39 pilotlog.txt
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas   8108747 Oct 12 17:39 log.46676269._059215.job.log.1
[2025-10-12 17:39:54] -rw-r--r--. 1 boincer umatlas        29 Oct 12 17:39 wrapper_checkpoint.txt
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas       357 Oct 12 17:39 output.list
[2025-10-12 17:39:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 17:39 boinc_mmap_file
[2025-10-12 17:39:54] -rw-r--r--. 1 boincer umatlas       620 Oct 12 17:39 runtime_log
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas   9359360 Oct 12 17:39 result.tar.gz
[2025-10-12 17:39:54] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 17:39 runtime_log.err
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas       668 Oct 12 17:39 IhYKDmscpR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6egNDmdolGJn.diag
[2025-10-12 17:39:54] -rw-r--r--. 1 boincer umatlas     21147 Oct 12 17:39 stderr.txt
[2025-10-12 17:39:54] HITS file was successfully produced:
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas 199398736 Oct 12 17:32 shared/HITS.pool.root.1
[2025-10-12 17:39:54]  *** Contents of shared directory: ***
[2025-10-12 17:39:54] total 418608
[2025-10-12 17:39:54] -rw-r--r--. 2 boincer umatlas 219298921 Oct 11 16:07 ATLAS.root_0
[2025-10-12 17:39:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:07 start_atlas.sh
[2025-10-12 17:39:54] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 16:07 input.tar.gz
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas 199398736 Oct 12 17:32 HITS.pool.root.1
[2025-10-12 17:39:54] -rw-------. 1 boincer umatlas   9359360 Oct 12 17:39 result.tar.gz
17:40:16 (3343767): run_atlas exited; CPU time 129558.746654
17:40:16 (3343767): called boinc_finish(0)

</stderr_txt>
]]>

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