Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:48:27 (3223866): wrapper (7.7.26015): starting
07:48:27 (3223866): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 07:48:27] Arguments: --nthreads 4
[2025-10-12 07:48:27] Threads: 4
[2025-10-12 07:48:27] Checking for CVMFS
[2025-10-12 07:48:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:48:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:48:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:48:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:48:28] 2.13.2.0 2713010 984 49388 151612 3 57 2726180 4194305 922 130560 0 1366441 99.994 30923 72 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-10-12 07:48:28] CVMFS is ok
[2025-10-12 07:48:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:48:28] Checking for apptainer binary...
[2025-10-12 07:48:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:48:28] Running /usr/bin/apptainer --version
[2025-10-12 07:48:28] apptainer version 1.3.4
[2025-10-12 07:48:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:48:28] rubble
[2025-10-12 07:48:28] apptainer works
[2025-10-12 07:48:28] Set ATHENA_PROC_NUMBER=4
[2025-10-12 07:48:28] Set ATHENA_CORE_NUMBER=4
[2025-10-12 07:48:28] Starting ATLAS job with PandaID=6838453269
[2025-10-12 07:48:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:37:57]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:37:57] 2025-10-12 09:36:50,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:37:57] 2025-10-12 09:36:50,870 | INFO     | time since job start (6490s) is within the limit (172800.0s)
[2025-10-12 09:37:57] 2025-10-12 09:36:52,119 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 09:37:57] 2025-10-12 09:36:52,121 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3683.1
[2025-10-12 09:37:57] 2025-10-12 09:36:52,123 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6838453269/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:37:57] 2025-10-12 09:36:52,123 | INFO     | extracted standard info from prmon json
[2025-10-12 09:37:57] 2025-10-12 09:36:52,123 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:37:57] 2025-10-12 09:36:52,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:37:57] 2025-10-12 09:36:52,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:37:57] 2025-10-12 09:36:52,124 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:37:57] 2025-10-12 09:36:52,125 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:37:57] 2025-10-12 09:36:52,125 | INFO     | sum of square deviations: 369281342.5
[2025-10-12 09:37:57] 2025-10-12 09:36:52,126 | INFO     | sum of deviations: -3893664251.499997
[2025-10-12 09:37:57] 2025-10-12 09:36:52,126 | INFO     | mean x: 1760258572.5
[2025-10-12 09:37:57] 2025-10-12 09:36:52,126 | INFO     | mean y: 2377806.783018868
[2025-10-12 09:37:57] 2025-10-12 09:36:52,126 | INFO     | -- intersect: 18562361993.202255
[2025-10-12 09:37:57] 2025-10-12 09:36:52,126 | INFO     | intersect: 18562361993.202255
[2025-10-12 09:37:57] 2025-10-12 09:36:52,126 | INFO     | chi2: 1.8986021283991825
[2025-10-12 09:37:57] 2025-10-12 09:36:52,126 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 09:37:57] 2025-10-12 09:36:52,127 | INFO     | sum of deviations: -3464154924.999999
[2025-10-12 09:37:57] 2025-10-12 09:36:52,127 | INFO     | mean x: 1760258420.0
[2025-10-12 09:37:57] 2025-10-12 09:36:52,127 | INFO     | mean y: 2379141.0198019804
[2025-10-12 09:37:57] 2025-10-12 09:36:52,127 | INFO     | -- intersect: 19090965509.391716
[2025-10-12 09:37:57] 2025-10-12 09:36:52,127 | INFO     | intersect: 19090965509.391716
[2025-10-12 09:37:57] 2025-10-12 09:36:52,127 | INFO     | chi2: 1.897258919313921
[2025-10-12 09:37:57] 2025-10-12 09:36:52,127 | INFO     | current chi2=1.897258919313921 (change=0.07074726532588244 %)
[2025-10-12 09:37:57] 2025-10-12 09:36:52,127 | INFO     | right removable region: 100
[2025-10-12 09:37:57] 2025-10-12 09:36:52,127 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 09:37:57] 2025-10-12 09:36:52,128 | INFO     | sum of deviations: -19613223799.0
[2025-10-12 09:37:57] 2025-10-12 09:36:52,128 | INFO     | mean x: 1760258725.0
[2025-10-12 09:37:57] 2025-10-12 09:36:52,128 | INFO     | mean y: 2424825.495049505
[2025-10-12 09:37:57] 2025-10-12 09:36:52,128 | INFO     | -- intersect: 108077493471.49596
[2025-10-12 09:37:57] 2025-10-12 09:36:52,128 | INFO     | intersect: 108077493471.49596
[2025-10-12 09:37:57] 2025-10-12 09:36:52,128 | INFO     | chi2: 0.2066084577120468
[2025-10-12 09:37:57] 2025-10-12 09:36:52,128 | INFO     | current chi2=0.2066084577120468 (change=89.11786442132296 %)
[2025-10-12 09:37:57] 2025-10-12 09:36:52,128 | INFO     | sum of square deviations: 274312120.0
[2025-10-12 09:37:57] 2025-10-12 09:36:52,128 | INFO     | sum of deviations: -15350292387.499994
[2025-10-12 09:37:57] 2025-10-12 09:36:52,129 | INFO     | mean x: 1760258877.5
[2025-10-12 09:37:57] 2025-10-12 09:36:52,129 | INFO     | mean y: 2410389.7604166665
[2025-10-12 09:37:57] 2025-10-12 09:36:52,129 | INFO     | -- intersect: 98505124915.52594
[2025-10-12 09:37:57] 2025-10-12 09:36:52,129 | INFO     | intersect: 98505124915.52594
[2025-10-12 09:37:57] 2025-10-12 09:36:52,129 | INFO     | chi2: 0.1978072221000424
[2025-10-12 09:37:57] 2025-10-12 09:36:52,129 | INFO     | current chi2=0.1978072221000424 (change=4.259862209644302 %)
[2025-10-12 09:37:57] 2025-10-12 09:36:52,129 | INFO     | left removable region: 20
[2025-10-12 09:37:57] 2025-10-12 09:36:52,129 | INFO     | sum of square deviations: 158737860.0
[2025-10-12 09:37:57] 2025-10-12 09:36:52,129 | INFO     | sum of deviations: -5497271291.5
[2025-10-12 09:37:57] 2025-10-12 09:36:52,129 | INFO     | mean x: 1760258999.5
[2025-10-12 09:37:57] 2025-10-12 09:36:52,129 | INFO     | mean y: 2374423.9625
[2025-10-12 09:37:57] 2025-10-12 09:36:52,130 | INFO     | -- intersect: 60962130738.90755
[2025-10-12 09:37:57] 2025-10-12 09:36:52,130 | INFO     | intersect: 60962130738.90755
[2025-10-12 09:37:57] 2025-10-12 09:36:52,130 | INFO     | chi2: 0.11988907138870704
[2025-10-12 09:37:57] 2025-10-12 09:36:52,130 | INFO     | -- intersect: 60962130738.90755
[2025-10-12 09:37:57] 2025-10-12 09:36:52,130 | INFO     | current memory leak: -34.63 B/s (using 80 data points, chi2=0.12)
[2025-10-12 09:37:57] 2025-10-12 09:36:52,130 | INFO     | could have reported an average CPU frequency of 3969 MHz (7 samples)
[2025-10-12 09:37:57] 2025-10-12 09:36:52,130 | INFO     | ..............................
[2025-10-12 09:37:57] 2025-10-12 09:36:52,130 | INFO     | . Timing measurements:
[2025-10-12 09:37:57] 2025-10-12 09:36:52,130 | INFO     | . get job = 0 s
[2025-10-12 09:37:57] 2025-10-12 09:36:52,130 | INFO     | . initial setup = 6 s
[2025-10-12 09:37:57] 2025-10-12 09:36:52,131 | INFO     | . payload setup = 3 s
[2025-10-12 09:37:57] 2025-10-12 09:36:52,131 | INFO     | . stage-in = 0 s
[2025-10-12 09:37:57] 2025-10-12 09:36:52,131 | INFO     | . payload execution = 6428 s
[2025-10-12 09:37:57] 2025-10-12 09:36:52,131 | INFO     | . stage-out = 0 s
[2025-10-12 09:37:57] 2025-10-12 09:36:52,131 | INFO     | . log creation = 0 s
[2025-10-12 09:37:57] 2025-10-12 09:36:52,131 | INFO     | ..............................
[2025-10-12 09:37:57] 2025-10-12 09:36:52,565 | INFO     | 
[2025-10-12 09:37:57] 2025-10-12 09:36:52,565 | INFO     | job summary report
[2025-10-12 09:37:57] 2025-10-12 09:36:52,565 | INFO     | --------------------------------------------------
[2025-10-12 09:37:57] 2025-10-12 09:36:52,565 | INFO     | PanDA job id: 6838453269
[2025-10-12 09:37:57] 2025-10-12 09:36:52,566 | INFO     | task id: 46676269
[2025-10-12 09:37:57] 2025-10-12 09:36:52,566 | INFO     | errors: (none)
[2025-10-12 09:37:57] 2025-10-12 09:36:52,566 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:37:57] 2025-10-12 09:36:52,566 | INFO     | pilot state: finished 
[2025-10-12 09:37:57] 2025-10-12 09:36:52,566 | INFO     | transexitcode: 0
[2025-10-12 09:37:57] 2025-10-12 09:36:52,566 | INFO     | exeerrorcode: 0
[2025-10-12 09:37:57] 2025-10-12 09:36:52,566 | INFO     | exeerrordiag: 
[2025-10-12 09:37:57] 2025-10-12 09:36:52,566 | INFO     | exitcode: 0
[2025-10-12 09:37:57] 2025-10-12 09:36:52,566 | INFO     | exitmsg: OK
[2025-10-12 09:37:57] 2025-10-12 09:36:52,566 | INFO     | cpuconsumptiontime: 24030 s
[2025-10-12 09:37:57] 2025-10-12 09:36:52,566 | INFO     | nevents: 400
[2025-10-12 09:37:57] 2025-10-12 09:36:52,568 | INFO     | neventsw: 0
[2025-10-12 09:37:57] 2025-10-12 09:36:52,568 | INFO     | pid: 3234022
[2025-10-12 09:37:57] 2025-10-12 09:36:52,568 | INFO     | pgrp: 3234022
[2025-10-12 09:37:57] 2025-10-12 09:36:52,568 | INFO     | corecount: 4
[2025-10-12 09:37:57] 2025-10-12 09:36:52,568 | INFO     | event service: False
[2025-10-12 09:37:57] 2025-10-12 09:36:52,568 | INFO     | sizes: {0: 2348863, 3: 2349125, 11: 2349153, 6436: 2385289, 6439: 2385289, 6449: 2385511}
[2025-10-12 09:37:57] 2025-10-12 09:36:52,568 | INFO     | --------------------------------------------------
[2025-10-12 09:37:57] 2025-10-12 09:36:52,568 | INFO     | 
[2025-10-12 09:37:57] 2025-10-12 09:36:52,569 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-10-12 09:37:57] 2025-10-12 09:36:52,588 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,588 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,588 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,588 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,588 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,589 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,589 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:37:57] 2025-10-12 09:36:52,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,589 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:37:57] 2025-10-12 09:36:52,589 | INFO     | job 6838453269 has completed (purged errors)
[2025-10-12 09:37:57] 2025-10-12 09:36:52,589 | INFO     | overall cleanup function is called
[2025-10-12 09:37:57] 2025-10-12 09:36:53,597 | INFO     | --- collectZombieJob: --- 10, [3234022]
[2025-10-12 09:37:57] 2025-10-12 09:36:53,597 | INFO     | zombie collector waiting for pid 3234022
[2025-10-12 09:37:57] 2025-10-12 09:36:53,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:37:57] 2025-10-12 09:36:53,597 | INFO     | collected zombie processes
[2025-10-12 09:37:57] 2025-10-12 09:36:53,597 | INFO     | will attempt to kill all subprocesses of pid=3234022
[2025-10-12 09:37:57] 2025-10-12 09:36:53,657 | INFO     | process IDs to be killed: [3234022] (in reverse order)
[2025-10-12 09:37:57] 2025-10-12 09:36:53,692 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:37:57] 2025-10-12 09:36:53,692 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:37:57] 2025-10-12 09:36:53,694 | INFO     | did not find any defunct processes belonging to 3234022
[2025-10-12 09:37:57] 2025-10-12 09:36:53,696 | INFO     | did not find any defunct processes belonging to 3234022
[2025-10-12 09:37:57] 2025-10-12 09:36:53,696 | INFO     | ready for new job
[2025-10-12 09:37:57] 2025-10-12 09:36:53,696 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:37:57] 2025-10-12 09:36:53,697 | INFO     | ***************************************
[2025-10-12 09:37:57] 2025-10-12 09:36:53,697 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:37:57] 2025-10-12 09:36:53,697 | INFO     | ***************************************
[2025-10-12 09:37:57] 2025-10-12 09:36:53,697 | INFO     | 
[2025-10-12 09:37:57] 2025-10-12 09:36:53,698 | INFO     | architecture information:
[2025-10-12 09:37:57] 2025-10-12 09:36:53,698 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:37:57] 2025-10-12 09:36:53,712 | INFO     | cat /etc/os-release:
[2025-10-12 09:37:57] NAME="CentOS Linux"
[2025-10-12 09:37:57] VERSION="7 (Core)"
[2025-10-12 09:37:57] ID="centos"
[2025-10-12 09:37:57] ID_LIKE="rhel fedora"
[2025-10-12 09:37:57] VERSION_ID="7"
[2025-10-12 09:37:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:37:57] ANSI_COLOR="0;31"
[2025-10-12 09:37:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:37:57] HOME_URL="https://www.centos.org/"
[2025-10-12 09:37:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:37:57] 
[2025-10-12 09:37:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:37:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:37:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:37:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:37:57] 
[2025-10-12 09:37:57] 2025-10-12 09:36:53,712 | INFO     | ***************************************
[2025-10-12 09:37:57] 2025-10-12 09:36:54,215 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-10-12 09:37:57] 2025-10-12 09:36:54,230 | INFO     | sufficient remaining disk space (260262854656 B)
[2025-10-12 09:37:57] 2025-10-12 09:36:54,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:37:57] 2025-10-12 09:36:54,230 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:37:57] 2025-10-12 09:36:54,230 | INFO     | update_server=False
[2025-10-12 09:37:57] 2025-10-12 09:36:54,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:37:57] 2025-10-12 09:36:54,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:37:57] 2025-10-12 09:36:54,285 | INFO     | aborting loop
[2025-10-12 09:37:57] 2025-10-12 09:36:54,383 | INFO     | all payload control threads have been joined
[2025-10-12 09:37:57] 2025-10-12 09:36:54,723 | INFO     | all job control threads have been joined
[2025-10-12 09:37:57] 2025-10-12 09:36:54,730 | INFO     | all data control threads have been joined
[2025-10-12 09:37:57] 2025-10-12 09:36:55,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:37:57] 2025-10-12 09:36:55,235 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:36:55,274 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:36:55,290 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:36:55,388 | INFO     | [payload] control thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:36:55,728 | INFO     | [job] control thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:36:55,735 | INFO     | [data] control thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:36:56,024 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:36:56,457 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:36:56,536 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:36:56,577 | INFO     | [job] validate thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:36:56,672 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:36:56,689 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:36:57,042 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:36:57,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:37:57] 2025-10-12 09:36:57,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:37:57] 2025-10-12 09:36:58,212 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:37:01,415 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:37:04,839 | INFO     | job.realtimelogging is not enabled
[2025-10-12 09:37:57] 2025-10-12 09:37:05,844 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:37:57] 2025-10-12 09:37:24,015 | INFO     | PID=3227589 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:37:57] 2025-10-12 09:37:24,015 | INFO     | .. there are 2 such processes running
[2025-10-12 09:37:57] 2025-10-12 09:37:24,015 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:37:57] 2025-10-12 09:37:24,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:37:57] 2025-10-12 09:37:24,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:37:57] 2025-10-12 09:37:50,286 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:37:57] 2025-10-12 09:37:52,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136198385051456)>', '<ExcThread(monitor, started 136197758244608)>']
[2025-10-12 09:37:57] 2025-10-12 09:37:52,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:37:57] 2025-10-12 09:37:52,157 | INFO     | [monitor] control thread has ended
[2025-10-12 09:37:57] 2025-10-12 09:37:57,039 | INFO     | all workflow threads have been joined
[2025-10-12 09:37:57] 2025-10-12 09:37:57,040 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:37:57] 2025-10-12 09:37:57,040 | INFO     | traces error code: 0
[2025-10-12 09:37:57] 2025-10-12 09:37:57,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:37:57] 2025-10-12 09:37:57,127 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:37:57] 2025-10-12 09:37:57,129 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:37:57] 2025-10-12 09:37:57,132 [wrapper] pilotpid: 3227589
[2025-10-12 09:37:57] 2025-10-12 09:37:57,134 [wrapper] Pilot exit status: 0
[2025-10-12 09:37:57] 2025-10-12 09:37:57,141 [wrapper] pandaids: 6838453269
[2025-10-12 09:37:57] 2025-10-12 09:37:57,164 [wrapper] cleanup supervisor_pilot 3275891 3227590
[2025-10-12 09:37:57] 2025-10-12 09:37:57,166 [wrapper] Test setup, not cleaning
[2025-10-12 09:37:57] 2025-10-12 09:37:57,169 [wrapper] apfmon messages muted
[2025-10-12 09:37:57] 2025-10-12 09:37:57,171 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:37:57] 2025-10-12 09:37:57,173 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:37:57]  *** Error codes and diagnostics ***
[2025-10-12 09:37:57]     "exeErrorCode": 0,
[2025-10-12 09:37:57]     "exeErrorDiag": "",
[2025-10-12 09:37:57]     "pilotErrorCode": 0,
[2025-10-12 09:37:57]     "pilotErrorDiag": "",
[2025-10-12 09:37:57]  *** Listing of results directory ***
[2025-10-12 09:37:57] total 417268
[2025-10-12 09:37:57] -rw-r--r-- 1 boinc boinc    557409 Oct 11 14:01 pilot3.tar.gz
[2025-10-12 09:37:57] -rw-r--r-- 1 boinc boinc      5112 Oct 11 14:12 queuedata.json
[2025-10-12 09:37:57] -rwx------ 1 boinc boinc     36292 Oct 11 14:13 runpilot2-wrapper.sh
[2025-10-12 09:37:57] -rw-r--r-- 1 boinc boinc       100 Oct 12 07:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:37:57] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 07:48 run_atlas
[2025-10-12 09:37:57] -rw-r--r-- 1 boinc boinc       105 Oct 12 07:48 job.xml
[2025-10-12 09:37:57] -rw-r--r-- 2 boinc boinc 222550417 Oct 12 07:48 EVNT.46676267._002375.pool.root.1
[2025-10-12 09:37:57] -rw-r--r-- 1 boinc boinc      9731 Oct 12 07:48 init_data.xml
[2025-10-12 09:37:57] drwxrwx--x 2 boinc boinc      4096 Oct 12 07:48 shared
[2025-10-12 09:37:57] -rw-r--r-- 2 boinc boinc    569677 Oct 12 07:48 input.tar.gz
[2025-10-12 09:37:57] -rw-r--r-- 2 boinc boinc     15120 Oct 12 07:48 start_atlas.sh
[2025-10-12 09:37:57] -rw-r--r-- 1 boinc boinc         0 Oct 12 07:48 boinc_lockfile
[2025-10-12 09:37:57] -rw-r--r-- 1 boinc boinc      2549 Oct 12 07:48 pandaJob.out
[2025-10-12 09:37:57] -rw------- 1 boinc boinc    975520 Oct 12 07:48 agis_schedconf.cvmfs.json
[2025-10-12 09:37:57] -rw------- 1 boinc boinc   1560580 Oct 12 07:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:37:57] drwx------ 5 boinc boinc      4096 Oct 12 07:48 pilot3
[2025-10-12 09:37:57] -rw------- 1 boinc boinc 198421990 Oct 12 09:36 HITS.46676269._059129.pool.root.1
[2025-10-12 09:37:57] -rw------- 1 boinc boinc        95 Oct 12 09:36 pilot_heartbeat.json
[2025-10-12 09:37:57] -rw------- 1 boinc boinc      1014 Oct 12 09:36 memory_monitor_summary.json
[2025-10-12 09:37:57] -rw------- 1 boinc boinc    282590 Oct 12 09:36 log.46676269._059129.job.log.tgz.1
[2025-10-12 09:37:57] -rw-r--r-- 1 boinc boinc       529 Oct 12 09:36 boinc_task_state.xml
[2025-10-12 09:37:57] -rw------- 1 boinc boinc      7725 Oct 12 09:36 heartbeat.json
[2025-10-12 09:37:57] -rw-r--r-- 1 boinc boinc      8192 Oct 12 09:37 boinc_mmap_file
[2025-10-12 09:37:57] -rw-r--r-- 1 boinc boinc        27 Oct 12 09:37 wrapper_checkpoint.txt
[2025-10-12 09:37:57] -rw------- 1 boinc boinc      4903 Oct 12 09:37 pilotlog.txt
[2025-10-12 09:37:57] -rw------- 1 boinc boinc    919599 Oct 12 09:37 log.46676269._059129.job.log.1
[2025-10-12 09:37:57] -rw------- 1 boinc boinc       357 Oct 12 09:37 output.list
[2025-10-12 09:37:57] -rw-r--r-- 1 boinc boinc       620 Oct 12 09:37 runtime_log
[2025-10-12 09:37:57] -rw------- 1 boinc boinc   1218560 Oct 12 09:37 result.tar.gz
[2025-10-12 09:37:57] -rw-r--r-- 1 boinc boinc      8756 Oct 12 09:37 runtime_log.err
[2025-10-12 09:37:57] -rw------- 1 boinc boinc       643 Oct 12 09:37 jXCNDmtWpR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmI3RMDm67GlXm.diag
[2025-10-12 09:37:57] -rw-r--r-- 1 boinc boinc     20760 Oct 12 09:37 stderr.txt
[2025-10-12 09:37:57] HITS file was successfully produced:
[2025-10-12 09:37:57] -rw------- 1 boinc boinc 198421990 Oct 12 09:36 shared/HITS.pool.root.1
[2025-10-12 09:37:57]  *** Contents of shared directory: ***
[2025-10-12 09:37:57] total 412884
[2025-10-12 09:37:57] -rw-r--r-- 2 boinc boinc 222550417 Oct 12 07:48 ATLAS.root_0
[2025-10-12 09:37:57] -rw-r--r-- 2 boinc boinc    569677 Oct 12 07:48 input.tar.gz
[2025-10-12 09:37:57] -rw-r--r-- 2 boinc boinc     15120 Oct 12 07:48 start_atlas.sh
[2025-10-12 09:37:57] -rw------- 1 boinc boinc 198421990 Oct 12 09:36 HITS.pool.root.1
[2025-10-12 09:37:57] -rw------- 1 boinc boinc   1218560 Oct 12 09:37 result.tar.gz
09:37:59 (3223866): run_atlas exited; CPU time 24042.018839
09:37:59 (3223866): called boinc_finish(0)

</stderr_txt>
]]>

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