Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:08:02 (30225): wrapper (7.7.26015): starting
15:08:02 (30225): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 15:08:02] Arguments: --nthreads 8
[2025-10-11 15:08:02] Threads: 8
[2025-10-11 15:08:02] Checking for CVMFS
[2025-10-11 15:08:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 15:08:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 15:08:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 15:08:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 15:08:03] 2.11.2.0 6509 51803 78924 151593 3 59 11989606 20275200 1 130560 0 19859305 99.935 2352601 37006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 15:08:03] CVMFS is ok
[2025-10-11 15:08:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 15:08:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 15:08:03] Further information can be found at the LHC@home message board.
[2025-10-11 15:08:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 15:08:03] Checking for apptainer binary...
[2025-10-11 15:08:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 15:08:03] Running /usr/bin/apptainer --version
[2025-10-11 15:08:03] apptainer version 1.3.2-1.el7
[2025-10-11 15:08:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 15:08:05] c-204-16.aglt2.org
[2025-10-11 15:08:05] apptainer works
[2025-10-11 15:08:05] Set ATHENA_PROC_NUMBER=8
[2025-10-11 15:08:05] Set ATHENA_CORE_NUMBER=8
[2025-10-11 15:08:05] Starting ATLAS job with PandaID=6838453438
[2025-10-11 15:08:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:18:41]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:18:41] 2025-10-11 21:17:37,458 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:18:41] 2025-10-11 21:17:37,458 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:18:41] 2025-10-11 21:17:37,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:18:41] 2025-10-11 21:17:37,461 | INFO     | fitting pss+swap vs Time
[2025-10-11 17:18:41] 2025-10-11 21:17:37,461 | INFO     | sum of square deviations: 635130048.0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,462 | INFO     | sum of deviations: 10124487444.0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,462 | INFO     | mean x: 1760213577.0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,462 | INFO     | mean y: 2458652.6692913384
[2025-10-11 17:18:41] 2025-10-11 21:17:37,462 | INFO     | -- intersect: -28056771602.950462
[2025-10-11 17:18:41] 2025-10-11 21:17:37,462 | INFO     | intersect: -28056771602.950462
[2025-10-11 17:18:41] 2025-10-11 21:17:37,462 | INFO     | chi2: 2.1889117061320937
[2025-10-11 17:18:41] 2025-10-11 21:17:37,463 | INFO     | sum of square deviations: 563026370.5
[2025-10-11 17:18:41] 2025-10-11 21:17:37,463 | INFO     | sum of deviations: 18445320910.0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,463 | INFO     | mean x: 1760213424.5
[2025-10-11 17:18:41] 2025-10-11 21:17:37,464 | INFO     | mean y: 2475648.1147540985
[2025-10-11 17:18:41] 2025-10-11 21:17:37,464 | INFO     | -- intersect: -57663920077.11452
[2025-10-11 17:18:41] 2025-10-11 21:17:37,464 | INFO     | intersect: -57663920077.11452
[2025-10-11 17:18:41] 2025-10-11 21:17:37,464 | INFO     | chi2: 1.313473463558843
[2025-10-11 17:18:41] 2025-10-11 21:17:37,464 | INFO     | current chi2=1.313473463558843 (change=39.9942236190143 %)
[2025-10-11 17:18:41] 2025-10-11 21:17:37,464 | INFO     | sum of square deviations: 496597218.0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,465 | INFO     | sum of deviations: 17632332002.999996
[2025-10-11 17:18:41] 2025-10-11 21:17:37,465 | INFO     | mean x: 1760213272.0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,465 | INFO     | mean y: 2473780.717948718
[2025-10-11 17:18:41] 2025-10-11 21:17:37,465 | INFO     | -- intersect: -62496194522.31499
[2025-10-11 17:18:41] 2025-10-11 21:17:37,466 | INFO     | intersect: -62496194522.31499
[2025-10-11 17:18:41] 2025-10-11 21:17:37,466 | INFO     | chi2: 1.314620202934353
[2025-10-11 17:18:41] 2025-10-11 21:17:37,466 | INFO     | current chi2=1.314620202934353 (change=-0.08730586550282798 %)
[2025-10-11 17:18:41] 2025-10-11 21:17:37,466 | INFO     | right removable region: 116
[2025-10-11 17:18:41] 2025-10-11 21:17:37,466 | INFO     | sum of square deviations: 563026370.5
[2025-10-11 17:18:41] 2025-10-11 21:17:37,467 | INFO     | sum of deviations: -6762665051.5
[2025-10-11 17:18:41] 2025-10-11 21:17:37,467 | INFO     | mean x: 1760213729.5
[2025-10-11 17:18:41] 2025-10-11 21:17:37,467 | INFO     | mean y: 2493646.3852459015
[2025-10-11 17:18:41] 2025-10-11 21:17:37,467 | INFO     | -- intersect: 21144906320.748825
[2025-10-11 17:18:41] 2025-10-11 21:17:37,467 | INFO     | intersect: 21144906320.748825
[2025-10-11 17:18:41] 2025-10-11 21:17:37,468 | INFO     | chi2: 0.9178856289664024
[2025-10-11 17:18:41] 2025-10-11 21:17:37,468 | INFO     | current chi2=0.9178856289664024 (change=58.066575897282405 %)
[2025-10-11 17:18:41] 2025-10-11 21:17:37,468 | INFO     | sum of square deviations: 496597218.0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,469 | INFO     | sum of deviations: -6801868135.0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,469 | INFO     | mean x: 1760213882.0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,469 | INFO     | mean y: 2493765.170940171
[2025-10-11 17:18:41] 2025-10-11 21:17:37,469 | INFO     | -- intersect: 24112058379.688072
[2025-10-11 17:18:41] 2025-10-11 21:17:37,469 | INFO     | intersect: 24112058379.688072
[2025-10-11 17:18:41] 2025-10-11 21:17:37,469 | INFO     | chi2: 0.9100881144074575
[2025-10-11 17:18:41] 2025-10-11 21:17:37,469 | INFO     | current chi2=0.9100881144074575 (change=0.8495082952464718 %)
[2025-10-11 17:18:41] 2025-10-11 21:17:37,470 | INFO     | left removable region: 20
[2025-10-11 17:18:41] 2025-10-11 21:17:37,470 | INFO     | sum of square deviations: 274312120.0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,470 | INFO     | sum of deviations: 446962006.0000001
[2025-10-11 17:18:41] 2025-10-11 21:17:37,470 | INFO     | mean x: 1760213851.5
[2025-10-11 17:18:41] 2025-10-11 21:17:37,471 | INFO     | mean y: 2516510.3958333335
[2025-10-11 17:18:41] 2025-10-11 21:17:37,471 | INFO     | -- intersect: -2865562063.950157
[2025-10-11 17:18:41] 2025-10-11 21:17:37,471 | INFO     | intersect: -2865562063.950157
[2025-10-11 17:18:41] 2025-10-11 21:17:37,471 | INFO     | chi2: 4.1629916336365365e-05
[2025-10-11 17:18:41] 2025-10-11 21:17:37,471 | INFO     | -- intersect: -2865562063.950157
[2025-10-11 17:18:41] 2025-10-11 21:17:37,471 | INFO     | current memory leak: 1.63 B/s (using 96 data points, chi2=0.00)
[2025-10-11 17:18:41] 2025-10-11 21:17:37,472 | INFO     | could have reported an average CPU frequency of 1989 MHz (8 samples)
[2025-10-11 17:18:41] 2025-10-11 21:17:37,472 | INFO     | ..............................
[2025-10-11 17:18:41] 2025-10-11 21:17:37,472 | INFO     | . Timing measurements:
[2025-10-11 17:18:41] 2025-10-11 21:17:37,472 | INFO     | . get job = 0 s
[2025-10-11 17:18:41] 2025-10-11 21:17:37,472 | INFO     | . initial setup = 2 s
[2025-10-11 17:18:41] 2025-10-11 21:17:37,472 | INFO     | . payload setup = 8 s
[2025-10-11 17:18:41] 2025-10-11 21:17:37,472 | INFO     | . stage-in = 0 s
[2025-10-11 17:18:41] 2025-10-11 21:17:37,473 | INFO     | . payload execution = 7719 s
[2025-10-11 17:18:41] 2025-10-11 21:17:37,473 | INFO     | . stage-out = 0 s
[2025-10-11 17:18:41] 2025-10-11 21:17:37,473 | INFO     | . log creation = 0 s
[2025-10-11 17:18:41] 2025-10-11 21:17:37,473 | INFO     | ..............................
[2025-10-11 17:18:41] 2025-10-11 21:17:37,564 | INFO     | 
[2025-10-11 17:18:41] 2025-10-11 21:17:37,565 | INFO     | job summary report
[2025-10-11 17:18:41] 2025-10-11 21:17:37,565 | INFO     | --------------------------------------------------
[2025-10-11 17:18:41] 2025-10-11 21:17:37,565 | INFO     | PanDA job id: 6838453438
[2025-10-11 17:18:41] 2025-10-11 21:17:37,565 | INFO     | task id: 46676269
[2025-10-11 17:18:41] 2025-10-11 21:17:37,565 | INFO     | errors: (none)
[2025-10-11 17:18:41] 2025-10-11 21:17:37,565 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:18:41] 2025-10-11 21:17:37,566 | INFO     | pilot state: finished 
[2025-10-11 17:18:41] 2025-10-11 21:17:37,566 | INFO     | transexitcode: 0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,566 | INFO     | exeerrorcode: 0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,566 | INFO     | exeerrordiag: 
[2025-10-11 17:18:41] 2025-10-11 21:17:37,566 | INFO     | exitcode: 0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,566 | INFO     | exitmsg: OK
[2025-10-11 17:18:41] 2025-10-11 21:17:37,567 | INFO     | cpuconsumptiontime: 57539 s
[2025-10-11 17:18:41] 2025-10-11 21:17:37,567 | INFO     | nevents: 400
[2025-10-11 17:18:41] 2025-10-11 21:17:37,567 | INFO     | neventsw: 0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,567 | INFO     | pid: 8511
[2025-10-11 17:18:41] 2025-10-11 21:17:37,567 | INFO     | pgrp: 8511
[2025-10-11 17:18:41] 2025-10-11 21:17:37,568 | INFO     | corecount: 8
[2025-10-11 17:18:41] 2025-10-11 21:17:37,568 | INFO     | event service: False
[2025-10-11 17:18:41] 2025-10-11 21:17:37,568 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 11: 2349175, 7728: 2376776, 7729: 2385774, 7730: 2385958, 7738: 2386152}
[2025-10-11 17:18:41] 2025-10-11 21:17:37,568 | INFO     | --------------------------------------------------
[2025-10-11 17:18:41] 2025-10-11 21:17:37,568 | INFO     | 
[2025-10-11 17:18:41] 2025-10-11 21:17:37,568 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 17:18:41] 2025-10-11 21:17:37,598 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,601 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,601 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,601 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,601 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,601 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,602 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,602 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:18:41] 2025-10-11 21:17:37,602 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,602 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:18:41] 2025-10-11 21:17:37,602 | INFO     | job 6838453438 has completed (purged errors)
[2025-10-11 17:18:41] 2025-10-11 21:17:37,603 | INFO     | overall cleanup function is called
[2025-10-11 17:18:41] 2025-10-11 21:17:38,611 | INFO     | --- collectZombieJob: --- 10, [8511]
[2025-10-11 17:18:41] 2025-10-11 21:17:38,611 | INFO     | zombie collector waiting for pid 8511
[2025-10-11 17:18:41] 2025-10-11 21:17:38,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:18:41] 2025-10-11 21:17:38,611 | INFO     | collected zombie processes
[2025-10-11 17:18:41] 2025-10-11 21:17:38,612 | INFO     | will attempt to kill all subprocesses of pid=8511
[2025-10-11 17:18:41] 2025-10-11 21:17:38,705 | INFO     | process IDs to be killed: [8511] (in reverse order)
[2025-10-11 17:18:41] 2025-10-11 21:17:38,762 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:18:41] 2025-10-11 21:17:38,763 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:18:41] 2025-10-11 21:17:38,767 | INFO     | did not find any defunct processes belonging to 8511
[2025-10-11 17:18:41] 2025-10-11 21:17:38,771 | INFO     | did not find any defunct processes belonging to 8511
[2025-10-11 17:18:41] 2025-10-11 21:17:38,772 | INFO     | ready for new job
[2025-10-11 17:18:41] 2025-10-11 21:17:38,772 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:18:41] 2025-10-11 21:17:38,774 | INFO     | ***************************************
[2025-10-11 17:18:41] 2025-10-11 21:17:38,774 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 17:18:41] 2025-10-11 21:17:38,774 | INFO     | ***************************************
[2025-10-11 17:18:41] 2025-10-11 21:17:38,774 | INFO     | 
[2025-10-11 17:18:41] 2025-10-11 21:17:38,775 | INFO     | architecture information:
[2025-10-11 17:18:41] 2025-10-11 21:17:38,776 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:18:41] 2025-10-11 21:17:38,795 | INFO     | cat /etc/os-release:
[2025-10-11 17:18:41] NAME="CentOS Linux"
[2025-10-11 17:18:41] VERSION="7 (Core)"
[2025-10-11 17:18:41] ID="centos"
[2025-10-11 17:18:41] ID_LIKE="rhel fedora"
[2025-10-11 17:18:41] VERSION_ID="7"
[2025-10-11 17:18:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:18:41] ANSI_COLOR="0;31"
[2025-10-11 17:18:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:18:41] HOME_URL="https://www.centos.org/"
[2025-10-11 17:18:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:18:41] 
[2025-10-11 17:18:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:18:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:18:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:18:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:18:41] 
[2025-10-11 17:18:41] 2025-10-11 21:17:38,795 | INFO     | ***************************************
[2025-10-11 17:18:41] 2025-10-11 21:17:39,296 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 17:18:41] 2025-10-11 21:17:39,316 | INFO     | sufficient remaining disk space (18705547264 B)
[2025-10-11 17:18:41] 2025-10-11 21:17:39,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:18:41] 2025-10-11 21:17:39,317 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:18:41] 2025-10-11 21:17:39,317 | INFO     | update_server=False
[2025-10-11 17:18:41] 2025-10-11 21:17:39,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:18:41] 2025-10-11 21:17:39,318 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:18:41] 2025-10-11 21:17:39,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:18:41] 2025-10-11 21:17:39,489 | INFO     | all data control threads have been joined
[2025-10-11 17:18:41] 2025-10-11 21:17:39,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:18:41] 2025-10-11 21:17:39,962 | INFO     | aborting loop
[2025-10-11 17:18:41] 2025-10-11 21:17:39,983 | INFO     | all payload control threads have been joined
[2025-10-11 17:18:41] 2025-10-11 21:17:40,322 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:40,323 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:40,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:18:41] 2025-10-11 21:17:40,494 | INFO     | [data] control thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:40,541 | INFO     | all job control threads have been joined
[2025-10-11 17:18:41] 2025-10-11 21:17:40,740 | INFO     | [job] validate thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:40,943 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:40,968 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:40,988 | INFO     | [payload] control thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:41,100 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:41,105 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:41,139 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:41,444 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:41,546 | INFO     | [job] control thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:41,697 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:41,771 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:44,480 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:17:49,712 | INFO     | job.realtimelogging is not enabled
[2025-10-11 17:18:41] 2025-10-11 21:17:50,717 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:18:41] 2025-10-11 21:18:10,474 | INFO     | PID=2111 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 17:18:41] 2025-10-11 21:18:10,474 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:18:41] 2025-10-11 21:18:10,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:18:41] 2025-10-11 21:18:10,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:18:41] 2025-10-11 21:18:35,019 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:18:41] 2025-10-11 21:18:35,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139809076156224)>', '<ExcThread(monitor, started 139808366130944)>']
[2025-10-11 17:18:41] 2025-10-11 21:18:36,578 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:18:41] 2025-10-11 21:18:36,578 | INFO     | [monitor] control thread has ended
[2025-10-11 17:18:41] 2025-10-11 21:18:40,992 | INFO     | all workflow threads have been joined
[2025-10-11 17:18:41] 2025-10-11 21:18:40,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:18:41] 2025-10-11 21:18:40,993 | INFO     | traces error code: 0
[2025-10-11 17:18:41] 2025-10-11 21:18:40,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:18:41] 2025-10-11 21:18:41,098 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:18:41] 2025-10-11 21:18:41,103 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:18:41] 2025-10-11 21:18:41,107 [wrapper] pilotpid: 2111
[2025-10-11 17:18:41] 2025-10-11 21:18:41,113 [wrapper] Pilot exit status: 0
[2025-10-11 17:18:41] 2025-10-11 21:18:41,133 [wrapper] pandaids: 6838453438
[2025-10-11 17:18:41] 2025-10-11 21:18:41,182 [wrapper] cleanup supervisor_pilot 27920 2112
[2025-10-11 17:18:41] 2025-10-11 21:18:41,186 [wrapper] Test setup, not cleaning
[2025-10-11 17:18:41] 2025-10-11 21:18:41,191 [wrapper] apfmon messages muted
[2025-10-11 17:18:41] 2025-10-11 21:18:41,196 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:18:41] 2025-10-11 21:18:41,201 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:18:41]  *** Error codes and diagnostics ***
[2025-10-11 17:18:41]     "exeErrorCode": 0,
[2025-10-11 17:18:41]     "exeErrorDiag": "",
[2025-10-11 17:18:41]     "pilotErrorCode": 0,
[2025-10-11 17:18:41]     "pilotErrorDiag": "",
[2025-10-11 17:18:41]  *** Listing of results directory ***
[2025-10-11 17:18:41] total 416224
[2025-10-11 17:18:41] -rw-r--r-- 1 boincer umatlas    563267 Oct  7 03:02 pilot3.tar.gz
[2025-10-11 17:18:41] -rwx------ 1 boincer umatlas     36292 Oct 11 10:22 runpilot2-wrapper.sh
[2025-10-11 17:18:41] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 10:22 queuedata.json
[2025-10-11 17:18:41] -rw-r--r-- 1 boincer umatlas       100 Oct 11 15:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:18:41] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 15:08 run_atlas
[2025-10-11 17:18:41] -rw-r--r-- 1 boincer umatlas       105 Oct 11 15:08 job.xml
[2025-10-11 17:18:41] -rw-r--r-- 2 boincer umatlas 223506768 Oct 11 15:08 EVNT.46676267._002383.pool.root.1
[2025-10-11 17:18:41] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 15:08 start_atlas.sh
[2025-10-11 17:18:41] drwxrwx--x 2 boincer umatlas      4096 Oct 11 15:08 shared
[2025-10-11 17:18:41] -rw-r--r-- 2 boincer umatlas    576706 Oct 11 15:08 input.tar.gz
[2025-10-11 17:18:41] -rw-r--r-- 1 boincer umatlas         0 Oct 11 15:08 boinc_lockfile
[2025-10-11 17:18:41] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 15:08 pandaJob.out
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas    975520 Oct 11 15:08 agis_schedconf.cvmfs.json
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas   1560580 Oct 11 15:08 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:18:41] drwx------ 4 boincer umatlas      4096 Oct 11 15:08 pilot3
[2025-10-11 17:18:41] -rw-r--r-- 1 boincer umatlas      5909 Oct 11 17:11 init_data.xml
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas 195886217 Oct 11 17:16 HITS.46676269._059281.pool.root.1
[2025-10-11 17:18:41] -rw-r--r-- 1 boincer umatlas       529 Oct 11 17:17 boinc_task_state.xml
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas        95 Oct 11 17:17 pilot_heartbeat.json
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas      1050 Oct 11 17:17 memory_monitor_summary.json
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas    366235 Oct 11 17:17 log.46676269._059281.job.log.tgz.1
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas      7845 Oct 11 17:17 heartbeat.json
[2025-10-11 17:18:41] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 17:18 boinc_mmap_file
[2025-10-11 17:18:41] -rw-r--r-- 1 boincer umatlas        27 Oct 11 17:18 wrapper_checkpoint.txt
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas      4817 Oct 11 17:18 pilotlog.txt
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas   1086520 Oct 11 17:18 log.46676269._059281.job.log.1
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas       357 Oct 11 17:18 output.list
[2025-10-11 17:18:41] -rw-r--r-- 1 boincer umatlas       620 Oct 11 17:18 runtime_log
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas   1474560 Oct 11 17:18 result.tar.gz
[2025-10-11 17:18:41] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 17:18 runtime_log.err
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas       660 Oct 11 17:18 7vLKDmzfpR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmifgNDm5buLam.diag
[2025-10-11 17:18:41] -rw-r--r-- 1 boincer umatlas     20840 Oct 11 17:18 stderr.txt
[2025-10-11 17:18:41] HITS file was successfully produced:
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas 195886217 Oct 11 17:16 shared/HITS.pool.root.1
[2025-10-11 17:18:41]  *** Contents of shared directory: ***
[2025-10-11 17:18:41] total 411592
[2025-10-11 17:18:41] -rw-r--r-- 2 boincer umatlas 223506768 Oct 11 15:08 ATLAS.root_0
[2025-10-11 17:18:41] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 15:08 start_atlas.sh
[2025-10-11 17:18:41] -rw-r--r-- 2 boincer umatlas    576706 Oct 11 15:08 input.tar.gz
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas 195886217 Oct 11 17:16 HITS.pool.root.1
[2025-10-11 17:18:41] -rw------- 1 boincer umatlas   1474560 Oct 11 17:18 result.tar.gz
17:18:42 (30225): run_atlas exited; CPU time 57485.599963
17:18:42 (30225): called boinc_finish(0)

</stderr_txt>
]]>

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