Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 14:14:06 (15644): vboxwrapper version 26210
2025-10-12 14:14:06 (15644): BOINC client version: 8.2.5
2025-10-12 14:14:07 (15644): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-12 14:14:07 (15644): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 14:14:07 (15644): Create VM. (boinc_bb46df2ddc1487ef, slot#10)
2025-10-12 14:14:08 (15644): Setting Memory Size for VM. (4096MB)
2025-10-12 14:14:08 (15644): Setting CPU Count for VM. (1)
2025-10-12 14:14:08 (15644): Setting Chipset Options for VM.
2025-10-12 14:14:09 (15644): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 14:14:09 (15644): Setting Boot Options for VM.
2025-10-12 14:14:09 (15644): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 14:14:10 (15644): Enabling VM Network Access.
2025-10-12 14:14:10 (15644): Disabling USB Support for VM.
2025-10-12 14:14:10 (15644): Disabling COM Port Support for VM.
2025-10-12 14:14:10 (15644): Disabling LPT Port Support for VM.
2025-10-12 14:14:11 (15644): Disabling Audio Support for VM.
2025-10-12 14:14:11 (15644): Disabling Clipboard Support for VM.
2025-10-12 14:14:11 (15644): Disabling Drag and Drop Support for VM.
2025-10-12 14:14:12 (15644): Adding storage controller(s) to VM.
2025-10-12 14:14:12 (15644): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 14:14:12 (15644): Adding VirtualBox Guest Additions to VM.
2025-10-12 14:14:13 (15644): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 14:14:13 (15644): forwarding host port 65201 to guest port 80
2025-10-12 14:14:13 (15644): Enabling remote desktop for VM.
2025-10-12 14:14:14 (15644): Enabling shared directory for VM.
2025-10-12 14:14:15 (15644): Starting VM using VBoxManage interface. (boinc_bb46df2ddc1487ef, slot#10)
2025-10-12 14:14:24 (15644): Successfully started VM. (PID = '17836')
2025-10-12 14:14:24 (15644): Reporting VM Process ID to BOINC.
2025-10-12 14:14:24 (15644): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-12 14:14:24 (15644): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 14:14:24 (15644): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 14:14:24 (15644): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 14:14:24 (15644): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 14:14:24 (15644): Detected: Web Application Enabled (http://localhost:65201)
2025-10-12 14:14:24 (15644): Detected: Remote Desktop Enabled (localhost:65202)
2025-10-12 14:14:24 (15644): Preference change detected
2025-10-12 14:14:24 (15644): Setting CPU throttle for VM. (100%)
2025-10-12 14:14:24 (15644): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 14:14:26 (15644): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 14:14:26 (15644): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 14:14:31 (15644): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 14:14:31 (15644): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 14:14:31 (15644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 14:14:39 (15644): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 14:14:39 (15644): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 14:14:58 (15644): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 14:14:58 (15644): Guest Log: 00:00:00.000234 main     Log opened 2025-10-12T14:14:57.091287000Z
2025-10-12 14:14:58 (15644): Guest Log: 00:00:00.000595 main     OS Product: Linux
2025-10-12 14:14:58 (15644): Guest Log: 00:00:00.000645 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 14:14:58 (15644): Guest Log: 00:00:00.000678 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 14:14:58 (15644): Guest Log: 00:00:00.000710 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 14:14:58 (15644): Guest Log: 00:00:00.000711 main     Process ID: 1253
2025-10-12 14:14:58 (15644): Guest Log: 00:00:00.000712 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 14:14:58 (15644): Guest Log: 00:00:00.013376 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 14:14:59 (15644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 14:14:59 (15644): Guest Log: [INFO] Mounting shared directory
2025-10-12 14:14:59 (15644): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 14:15:01 (15644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 14:15:01 (15644): Guest Log: [INFO] Detected branch: prod
2025-10-12 14:15:01 (15644): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 14:15:01 (15644): Guest Log: Copying input files
2025-10-12 14:15:05 (15644): Guest Log: Copied input files into RunAtlas.
2025-10-12 14:15:05 (15644): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-10-12 14:15:08 (15644): Guest Log: 00:00:10.044131 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 100 273 000ns (GuestNow=1 760 271 308 034 429 000 ns GuestLast=1 760 278 497 134 702 000 ns fSetTimeLastLoop=true )
2025-10-12 14:15:13 (15644): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 14:15:13 (15644): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 14:15:13 (15644): Guest Log: 2.6.3.0 1523 0 31560 151620 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-10-12 14:15:14 (15644): Guest Log: copied the webapp to /var/www
2025-10-12 14:15:14 (15644): Guest Log: core_number=1
2025-10-12 14:15:14 (15644): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 14:15:15 (15644): Guest Log:  *** Starting ATLAS job. (PandaID=6837828499 taskID=46676269) ***
2025-10-12 15:55:34 (15644): Status Report: Elapsed Time: '6000.000000'
2025-10-12 15:55:34 (15644): Status Report: CPU Time: '5974.671875'
2025-10-12 17:36:45 (15644): Status Report: Elapsed Time: '12000.000000'
2025-10-12 17:36:45 (15644): Status Report: CPU Time: '12010.546875'
2025-10-12 19:18:01 (15644): Status Report: Elapsed Time: '18000.000000'
2025-10-12 19:18:01 (15644): Status Report: CPU Time: '18053.046875'
2025-10-12 20:59:09 (15644): Status Report: Elapsed Time: '24000.000000'
2025-10-12 20:59:09 (15644): Status Report: CPU Time: '24086.171875'
2025-10-12 22:40:56 (15644): Status Report: Elapsed Time: '30000.631878'
2025-10-12 22:40:56 (15644): Status Report: CPU Time: '30159.343750'
2025-10-13 00:22:10 (15644): Status Report: Elapsed Time: '36000.631878'
2025-10-13 00:22:10 (15644): Status Report: CPU Time: '36193.890625'
2025-10-13 02:03:24 (15644): Status Report: Elapsed Time: '42000.631878'
2025-10-13 02:03:24 (15644): Status Report: CPU Time: '42234.375000'
2025-10-13 03:43:40 (15644): Status Report: Elapsed Time: '48000.788618'
2025-10-13 03:43:40 (15644): Status Report: CPU Time: '48219.156250'
2025-10-13 05:24:21 (15644): Status Report: Elapsed Time: '54000.788618'
2025-10-13 05:24:21 (15644): Status Report: CPU Time: '54223.718750'
2025-10-13 05:51:53 (15644): Guest Log:  *** Job finished ***
2025-10-13 05:51:53 (15644): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:32,422 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:32,422 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:45,824 | INFO     | [monitor] cgroup control has ended
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:47,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139873318643520)>', '<ExcThread(monitor, started 139872656422656)>']
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:48,452 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:48,452 | INFO     | [monitor] control thread has ended
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:52,770 | INFO     | all workflow threads have been joined
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:52,770 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:52,770 | INFO     | traces error code: 0
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:52,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:52,884 [wrapper] ==== pilot stdout END ====
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:52,889 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:52,894 [wrapper] pilotpid: 5861
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:52,900 [wrapper] Pilot exit status: 0
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:52,951 [wrapper] pandaids: 6837828499
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:52,981 [wrapper] cleanup supervisor_pilot 14264 5862
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:52,987 [wrapper] Test setup, not cleaning
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:52,992 [wrapper] apfmon messages muted
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:52,998 [wrapper] ==== wrapper stdout END ====
2025-10-13 05:51:53 (15644): Guest Log: 2025-10-13 03:51:53,003 [wrapper] ==== wrapper stderr END ====
2025-10-13 05:51:53 (15644): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 05:51:53 (15644): Guest Log:     "exeErrorCode": 0,
2025-10-13 05:51:53 (15644): Guest Log:     "exeErrorDiag": "",
2025-10-13 05:51:53 (15644): Guest Log:     "pilotErrorCode": 0,
2025-10-13 05:51:53 (15644): Guest Log:     "pilotErrorDiag": "",
2025-10-13 05:51:53 (15644): Guest Log:  *** Listing of results directory ***
2025-10-13 05:51:53 (15644): Guest Log: total 212484
2025-10-13 05:51:53 (15644): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 21:48 queuedata.json
2025-10-13 05:51:53 (15644): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 21:48 pilot3.tar.gz
2025-10-13 05:51:53 (15644): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 21:54 runpilot2-wrapper.sh
2025-10-13 05:51:53 (15644): Guest Log: -rwxr-xr-x. 1 atlas atlas      9441 Oct 12 12:15 init_data.xml
2025-10-13 05:51:53 (15644): Guest Log: -rwxr-xr-x. 1 atlas atlas    569684 Oct 12 12:15 input.tar.gz
2025-10-13 05:51:53 (15644): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 12 12:15 start_atlas.sh
2025-10-13 05:51:53 (15644): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 12:15 EVNT.46676267._001858.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 05:51:53 (15644): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 12 12:15 pandaJob.out
2025-10-13 05:51:53 (15644): Guest Log: -rw-------. 1 atlas atlas    975512 Oct 12 12:15 agis_schedconf.cvmfs.json
2025-10-13 05:51:53 (15644): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 12:15 pilot3
2025-10-13 05:51:53 (15644): Guest Log: -rw-------. 1 atlas atlas 196702927 Oct 13 03:49 HITS.46676269._045960.pool.root.1
2025-10-13 05:51:53 (15644): Guest Log: -rw-------. 1 atlas atlas      1022 Oct 13 03:50 memory_monitor_summary.json
2025-10-13 05:51:53 (15644): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 03:50 agis_ddmendpoints.agis.ALL.json
2025-10-13 05:51:53 (15644): Guest Log: -rw-------. 1 atlas atlas    918556 Oct 13 03:50 log.46676269._045960.job.log.tgz.1
2025-10-13 05:51:53 (15644): Guest Log: -rw-------. 1 atlas atlas      7810 Oct 13 03:51 heartbeat.json
2025-10-13 05:51:53 (15644): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 03:51 pilot_heartbeat.json
2025-10-13 05:51:53 (15644): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 13 03:51 pilotlog.txt
2025-10-13 05:51:53 (15644): Guest Log: -rw-------. 1 atlas atlas   7604179 Oct 13 03:51 log.46676269._045960.job.log.1
2025-10-13 05:51:53 (15644): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 03:51 output.list
2025-10-13 05:51:53 (15644): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 03:51 runtime_log
2025-10-13 05:51:53 (15644): Guest Log: -rw-------. 1 atlas atlas   8540160 Oct 13 03:51 result.tar.gz
2025-10-13 05:51:53 (15644): Guest Log: -rw-r--r--. 1 atlas atlas      8513 Oct 13 03:51 runtime_log.err
2025-10-13 05:51:53 (15644): Guest Log: -rw-------. 1 atlas atlas       656 Oct 13 03:51 jqdLDmfFaR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjgQMDmKAR2En.diag
2025-10-13 05:51:53 (15644): Guest Log: Looking for outputfile HITS.46676269._045960.pool.root.1
2025-10-13 05:51:53 (15644): Guest Log: HITS file was successfully produced
2025-10-13 05:51:53 (15644): Guest Log: -rw-------. 1 atlas atlas 196702927 Oct 13 03:49 /home/atlas/RunAtlas/HITS.46676269._045960.pool.root.1
2025-10-13 05:51:56 (15644): Guest Log: Successfully finished the ATLAS job!
2025-10-13 05:51:56 (15644): Guest Log: Copying the results back to the shared directory!
2025-10-13 05:51:56 (15644): Guest Log:  *** Contents of shared directory: ***
2025-10-13 05:51:56 (15644): Guest Log: total 415372
2025-10-13 05:51:56 (15644): Guest Log: -rwxrwxrwx. 1 root root 219491643 Oct 12 12:14 ATLAS.root_0
2025-10-13 05:51:56 (15644): Guest Log: -rwxrwxrwx. 1 root root 196702927 Oct 13 03:51 HITS.pool.root.1
2025-10-13 05:51:56 (15644): Guest Log: -rwxrwxrwx. 1 root root      9441 Oct 12 12:14 init_data.xml
2025-10-13 05:51:56 (15644): Guest Log: -rwxrwxrwx. 1 root root    569684 Oct 11 19:21 input.tar.gz
2025-10-13 05:51:56 (15644): Guest Log: -rwxrwxrwx. 1 root root   8540160 Oct 13 03:51 result.tar.gz
2025-10-13 05:51:56 (15644): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 11 19:21 start_atlas.sh
2025-10-13 05:51:56 (15644): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 05:51:56 (15644): VM Completion File Detected.
2025-10-13 05:51:56 (15644): Powering off VM.
2025-10-13 05:51:58 (15644): Successfully stopped VM.
2025-10-13 05:51:58 (15644): Deregistering VM. (boinc_bb46df2ddc1487ef, slot#10)
2025-10-13 05:51:58 (15644): Removing network bandwidth throttle group from VM.
2025-10-13 05:51:58 (15644): Removing VM from VirtualBox.
2025-10-13 05:52:03 (15644): called boinc_finish(0)

</stderr_txt>
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