Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:56:01 (2662562): wrapper (7.7.26015): starting
11:56:01 (2662562): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 11:56:01] Arguments: --nthreads 3
[2025-10-12 11:56:01] Threads: 3
[2025-10-12 11:56:01] Checking for CVMFS
[2025-10-12 11:56:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:56:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:56:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:56:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:56:02] 2.9.2.0 1215301 4212 84768 151615 2 57 3583546 36864001 0 130560 0 3283754 99.991 140371 804 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 11:56:02] CVMFS is ok
[2025-10-12 11:56:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:56:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:56:02] Further information can be found at the LHC@home message board.
[2025-10-12 11:56:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:56:02] Checking for apptainer binary...
[2025-10-12 11:56:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:56:02] Running /usr/bin/apptainer --version
[2025-10-12 11:56:02] apptainer version 1.4.1-1.1
[2025-10-12 11:56:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:56:02] cosA127
[2025-10-12 11:56:02] apptainer works
[2025-10-12 11:56:02] Set ATHENA_PROC_NUMBER=3
[2025-10-12 11:56:02] Set ATHENA_CORE_NUMBER=3
[2025-10-12 11:56:02] Starting ATLAS job with PandaID=6838452913
[2025-10-12 11:56:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:20:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:20:38]  status_code=0
[2025-10-12 13:20:38]  storage_token=
[2025-10-12 13:20:38]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6838452913/log.46676269._058857.job.log.tgz.1
[2025-10-12 13:20:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/26/log.46676269._058857.job.log.tgz.1
[2025-10-12 13:20:38]  workdir=None
[2025-10-12 13:20:38] ]
[2025-10-12 13:20:38] 2025-10-12 11:19:57,459 | INFO     | transferring file log.46676269._058857.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6838452913/log.46676269._058857.job.log.tgz.1 to /local/data/boinc/
[2025-10-12 13:20:38] 2025-10-12 11:19:57,459 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6838452913/log.46676269._058857.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0588
[2025-10-12 13:20:38] 2025-10-12 11:19:57,472 | INFO     | adding to output.list: log.46676269._058857.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/26/log.46676269._058857.job.log.tg
[2025-10-12 13:20:38] 2025-10-12 11:19:57,472 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 13:20:38] 2025-10-12 11:19:57,472 | INFO     | summary of transferred files:
[2025-10-12 13:20:38] 2025-10-12 11:19:57,472 | INFO     |  -- lfn=log.46676269._058857.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 13:20:38] 2025-10-12 11:19:57,472 | INFO     | stage-out finished correctly
[2025-10-12 13:20:38] 2025-10-12 11:19:58,868 | INFO     | time since job start (5031s) is within the limit (172800.0s)
[2025-10-12 13:20:38] 2025-10-12 11:19:59,539 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 13:20:38] 2025-10-12 11:19:59,592 | INFO     | monitor loop #387: job 0:6838452913 is in state 'finished'
[2025-10-12 13:20:38] 2025-10-12 11:19:59,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:20:38] 2025-10-12 11:20:00,464 | INFO     | job 6838452913 has state=finished
[2025-10-12 13:20:38] 2025-10-12 11:20:00,464 | INFO     | preparing for final server update for job 6838452913 in state='finished'
[2025-10-12 13:20:38] 2025-10-12 11:20:00,874 | INFO     | time since job start (5033s) is within the limit (172800.0s)
[2025-10-12 13:20:38] 2025-10-12 11:20:01,046 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-12 13:20:38] 2025-10-12 11:20:01,046 | INFO     | this job has now completed (state=finished)
[2025-10-12 13:20:38] 2025-10-12 11:20:01,046 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 13:20:38] 2025-10-12 11:20:01,046 | INFO     | log transfer has been attempted: DONE
[2025-10-12 13:20:38] 2025-10-12 11:20:01,046 | INFO     | job 6838452913 has finished - writing final server update
[2025-10-12 13:20:38] 2025-10-12 11:20:01,046 | INFO     | total number of processed events: 400 (read)
[2025-10-12 13:20:38] 2025-10-12 11:20:01,047 | INFO     | executing command: lscpu
[2025-10-12 13:20:38] 2025-10-12 11:20:01,062 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 13:20:38] 2025-10-12 11:20:02,095 | INFO     | monitor loop #388: job 0:6838452913 is in state 'finished'
[2025-10-12 13:20:38] 2025-10-12 11:20:02,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:20:38] 2025-10-12 11:20:02,879 | INFO     | time since job start (5035s) is within the limit (172800.0s)
[2025-10-12 13:20:38] 2025-10-12 11:20:04,598 | INFO     | monitor loop #389: job 0:6838452913 is in state 'finished'
[2025-10-12 13:20:38] 2025-10-12 11:20:04,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:20:38] 2025-10-12 11:20:04,884 | INFO     | time since job start (5037s) is within the limit (172800.0s)
[2025-10-12 13:20:38] 2025-10-12 11:20:05,300 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 13:20:38] 2025-10-12 11:20:05,301 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3512.7869166666674
[2025-10-12 13:20:38] 2025-10-12 11:20:05,302 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838452913/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:20:38] 2025-10-12 11:20:05,302 | INFO     | extracted standard info from prmon json
[2025-10-12 13:20:38] 2025-10-12 11:20:05,302 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:20:38] 2025-10-12 11:20:05,302 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:20:38] 2025-10-12 11:20:05,302 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:20:38] 2025-10-12 11:20:05,302 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:20:38] 2025-10-12 11:20:05,303 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:20:38] 2025-10-12 11:20:05,303 | INFO     | sum of square deviations: 136095575.0
[2025-10-12 13:20:38] 2025-10-12 11:20:05,303 | INFO     | sum of deviations: -4320137882.5
[2025-10-12 13:20:38] 2025-10-12 11:20:05,303 | INFO     | mean x: 1760265579.5
[2025-10-12 13:20:38] 2025-10-12 11:20:05,303 | INFO     | mean y: 2375809.7763157897
[2025-10-12 13:20:38] 2025-10-12 11:20:05,303 | INFO     | -- intersect: 55879210991.66055
[2025-10-12 13:20:38] 2025-10-12 11:20:05,303 | INFO     | intersect: 55879210991.66055
[2025-10-12 13:20:38] 2025-10-12 11:20:05,303 | INFO     | chi2: 0.11349031987685404
[2025-10-12 13:20:38] 2025-10-12 11:20:05,303 | INFO     | -- intersect: 55879210991.66055
[2025-10-12 13:20:38] 2025-10-12 11:20:05,304 | INFO     | current memory leak: -31.74 B/s (using 76 data points, chi2=0.11)
[2025-10-12 13:20:38] 2025-10-12 11:20:05,304 | INFO     | could have reported an average CPU frequency of 3806 MHz (6 samples)
[2025-10-12 13:20:38] 2025-10-12 11:20:05,304 | INFO     | ..............................
[2025-10-12 13:20:38] 2025-10-12 11:20:05,304 | INFO     | . Timing measurements:
[2025-10-12 13:20:38] 2025-10-12 11:20:05,304 | INFO     | . get job = 0 s
[2025-10-12 13:20:38] 2025-10-12 11:20:05,304 | INFO     | . initial setup = 1 s
[2025-10-12 13:20:38] 2025-10-12 11:20:05,304 | INFO     | . payload setup = 2 s
[2025-10-12 13:20:38] 2025-10-12 11:20:05,304 | INFO     | . stage-in = 0 s
[2025-10-12 13:20:38] 2025-10-12 11:20:05,304 | INFO     | . payload execution = 5010 s
[2025-10-12 13:20:38] 2025-10-12 11:20:05,304 | INFO     | . stage-out = 0 s
[2025-10-12 13:20:38] 2025-10-12 11:20:05,304 | INFO     | . log creation = 0 s
[2025-10-12 13:20:38] 2025-10-12 11:20:05,304 | INFO     | ..............................
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | 
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | job summary report
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | --------------------------------------------------
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | PanDA job id: 6838452913
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | task id: 46676269
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | errors: (none)
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | pilot state: finished 
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | transexitcode: 0
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | exeerrorcode: 0
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | exeerrordiag: 
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | exitcode: 0
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | exitmsg: OK
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | cpuconsumptiontime: 14450 s
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | nevents: 400
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | neventsw: 0
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | pid: 2672718
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | pgrp: 2672718
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | corecount: 3
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | event service: False
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | sizes: {0: 2348860, 3: 2349122, 11: 2349150, 5017: 2384595, 5019: 2384595, 5025: 2384789}
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | --------------------------------------------------
[2025-10-12 13:20:38] 2025-10-12 11:20:05,334 | INFO     | 
[2025-10-12 13:20:38] 2025-10-12 11:20:05,335 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 13:20:38] 2025-10-12 11:20:05,345 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,345 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | job 6838452913 has completed (purged errors)
[2025-10-12 13:20:38] 2025-10-12 11:20:05,346 | INFO     | overall cleanup function is called
[2025-10-12 13:20:38] 2025-10-12 11:20:06,353 | INFO     | --- collectZombieJob: --- 10, [2672718]
[2025-10-12 13:20:38] 2025-10-12 11:20:06,353 | INFO     | zombie collector waiting for pid 2672718
[2025-10-12 13:20:38] 2025-10-12 11:20:06,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:20:38] 2025-10-12 11:20:06,353 | INFO     | collected zombie processes
[2025-10-12 13:20:38] 2025-10-12 11:20:06,353 | INFO     | will attempt to kill all subprocesses of pid=2672718
[2025-10-12 13:20:38] 2025-10-12 11:20:06,408 | INFO     | process IDs to be killed: [2672718] (in reverse order)
[2025-10-12 13:20:38] 2025-10-12 11:20:06,436 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:20:38] 2025-10-12 11:20:06,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:20:38] 2025-10-12 11:20:06,438 | INFO     | did not find any defunct processes belonging to 2672718
[2025-10-12 13:20:38] 2025-10-12 11:20:06,439 | INFO     | did not find any defunct processes belonging to 2672718
[2025-10-12 13:20:38] 2025-10-12 11:20:06,439 | INFO     | ready for new job
[2025-10-12 13:20:38] 2025-10-12 11:20:06,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:20:38] 2025-10-12 11:20:06,440 | INFO     | ***************************************
[2025-10-12 13:20:38] 2025-10-12 11:20:06,440 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:20:38] 2025-10-12 11:20:06,440 | INFO     | ***************************************
[2025-10-12 13:20:38] 2025-10-12 11:20:06,440 | INFO     | 
[2025-10-12 13:20:38] 2025-10-12 11:20:06,440 | INFO     | architecture information:
[2025-10-12 13:20:38] 2025-10-12 11:20:06,440 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:20:38] 2025-10-12 11:20:06,449 | INFO     | cat /etc/os-release:
[2025-10-12 13:20:38] NAME="CentOS Linux"
[2025-10-12 13:20:38] VERSION="7 (Core)"
[2025-10-12 13:20:38] ID="centos"
[2025-10-12 13:20:38] ID_LIKE="rhel fedora"
[2025-10-12 13:20:38] VERSION_ID="7"
[2025-10-12 13:20:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:20:38] ANSI_COLOR="0;31"
[2025-10-12 13:20:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:20:38] HOME_URL="https://www.centos.org/"
[2025-10-12 13:20:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:20:38] 
[2025-10-12 13:20:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:20:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:20:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:20:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:20:38] 
[2025-10-12 13:20:38] 2025-10-12 11:20:06,449 | INFO     | ***************************************
[2025-10-12 13:20:38] 2025-10-12 11:20:06,952 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 13:20:38] 2025-10-12 11:20:06,963 | INFO     | sufficient remaining disk space (356204412928 B)
[2025-10-12 13:20:38] 2025-10-12 11:20:06,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:20:38] 2025-10-12 11:20:06,964 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:20:38] 2025-10-12 11:20:06,964 | INFO     | update_server=False
[2025-10-12 13:20:38] 2025-10-12 11:20:06,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:20:38] 2025-10-12 11:20:06,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:20:38] 2025-10-12 11:20:07,102 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 13:20:38] 2025-10-12 11:20:07,102 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 13:20:38] 2025-10-12 11:20:07,102 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:20:38] 2025-10-12 11:20:07,102 | INFO     | will abort loop
[2025-10-12 13:20:38] 2025-10-12 11:20:07,153 | INFO     | all job control threads have been joined
[2025-10-12 13:20:38] 2025-10-12 11:20:07,446 | INFO     | all data control threads have been joined
[2025-10-12 13:20:38] 2025-10-12 11:20:07,969 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:07,970 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:07,975 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:08,019 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:20:38] 2025-10-12 11:20:08,085 | INFO     | all payload control threads have been joined
[2025-10-12 13:20:38] 2025-10-12 11:20:08,108 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:08,159 | INFO     | [job] control thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:08,367 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:08,452 | INFO     | [data] control thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:08,489 | INFO     | [job] validate thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:08,605 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:08,617 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:08,701 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:08,987 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:09,091 | INFO     | [payload] control thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:09,431 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:10,025 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:10,079 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:20:38] 2025-10-12 11:20:13,818 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:20:38] 2025-10-12 11:20:14,086 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:20:38] 2025-10-12 11:20:15,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140317116122944)>', '<ExcThread(monitor, started 140316472485632)>']
[2025-10-12 13:20:38] 2025-10-12 11:20:20,695 | INFO     | all workflow threads have been joined
[2025-10-12 13:20:38] 2025-10-12 11:20:20,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:20:38] 2025-10-12 11:20:20,696 | INFO     | traces error code: 0
[2025-10-12 13:20:38] 2025-10-12 11:20:20,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:20:38] 2025-10-12 11:20:38,002 | INFO     | PID=2666278 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:20:38] 2025-10-12 11:20:38,003 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:20:38] 2025-10-12 11:20:38,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:20:38] 2025-10-12 11:20:38,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:20:38] 2025-10-12 11:20:38,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:20:38] 2025-10-12 11:20:38,003 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 13:20:38] 2025-10-12 11:20:38,003 | INFO     | [monitor] control thread has ended
[2025-10-12 13:20:38] 2025-10-12 11:20:38,051 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:20:38] 2025-10-12 11:20:38,053 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:20:38] 2025-10-12 11:20:38,055 [wrapper] pilotpid: 2666278
[2025-10-12 13:20:38] 2025-10-12 11:20:38,057 [wrapper] Pilot exit status: 0
[2025-10-12 13:20:38] 2025-10-12 11:20:38,064 [wrapper] pandaids: 6838452913
[2025-10-12 13:20:38] 2025-10-12 11:20:38,083 [wrapper] cleanup supervisor_pilot 2688687 2666279
[2025-10-12 13:20:38] 2025-10-12 11:20:38,085 [wrapper] Test setup, not cleaning
[2025-10-12 13:20:38] 2025-10-12 11:20:38,088 [wrapper] apfmon messages muted
[2025-10-12 13:20:38] 2025-10-12 11:20:38,090 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:20:38] 2025-10-12 11:20:38,092 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:20:38]  *** Error codes and diagnostics ***
[2025-10-12 13:20:38]     "exeErrorCode": 0,
[2025-10-12 13:20:38]     "exeErrorDiag": "",
[2025-10-12 13:20:38]     "pilotErrorCode": 0,
[2025-10-12 13:20:38]     "pilotErrorDiag": "",
[2025-10-12 13:20:38]  *** Listing of results directory ***
[2025-10-12 13:20:38] total 411044
[2025-10-12 13:20:38] -rw-r--r-- 1 boinc boinc    557409 Oct 11 15:56 pilot3.tar.gz
[2025-10-12 13:20:38] -rw-r--r-- 1 boinc boinc      5112 Oct 11 15:58 queuedata.json
[2025-10-12 13:20:38] -rwx------ 1 boinc boinc     36292 Oct 11 15:59 runpilot2-wrapper.sh
[2025-10-12 13:20:38] -rw-r--r-- 1 boinc boinc       100 Oct 12 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:20:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 11:56 run_atlas
[2025-10-12 13:20:38] -rw-r--r-- 1 boinc boinc       105 Oct 12 11:56 job.xml
[2025-10-12 13:20:38] -rw-r--r-- 2 boinc boinc 220543418 Oct 12 11:56 EVNT.46676267._002360.pool.root.1
[2025-10-12 13:20:38] -rw-r--r-- 2 boinc boinc    569676 Oct 12 11:56 input.tar.gz
[2025-10-12 13:20:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:56 start_atlas.sh
[2025-10-12 13:20:38] drwxrwx--x 2 boinc boinc      4096 Oct 12 11:56 shared
[2025-10-12 13:20:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:56 boinc_setup_complete
[2025-10-12 13:20:38] -rw-r--r-- 1 boinc boinc      6437 Oct 12 11:56 init_data.xml
[2025-10-12 13:20:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:56 boinc_lockfile
[2025-10-12 13:20:38] -rw-r--r-- 1 boinc boinc      2550 Oct 12 11:56 pandaJob.out
[2025-10-12 13:20:38] -rw------- 1 boinc boinc    975536 Oct 12 11:56 agis_schedconf.cvmfs.json
[2025-10-12 13:20:38] -rw------- 1 boinc boinc   1560580 Oct 12 11:56 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:20:38] drwx------ 5 boinc boinc      4096 Oct 12 11:56 pilot3
[2025-10-12 13:20:38] -rw------- 1 boinc boinc 194481876 Oct 12 13:19 HITS.46676269._058857.pool.root.1
[2025-10-12 13:20:38] -rw-r--r-- 1 boinc boinc       529 Oct 12 13:19 boinc_task_state.xml
[2025-10-12 13:20:38] -rw------- 1 boinc boinc      1034 Oct 12 13:19 memory_monitor_summary.json
[2025-10-12 13:20:38] -rw------- 1 boinc boinc    252784 Oct 12 13:19 log.46676269._058857.job.log.tgz.1
[2025-10-12 13:20:38] -rw------- 1 boinc boinc      7760 Oct 12 13:20 heartbeat.json
[2025-10-12 13:20:38] -rw-r--r-- 1 boinc boinc        27 Oct 12 13:20 wrapper_checkpoint.txt
[2025-10-12 13:20:38] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:20 boinc_mmap_file
[2025-10-12 13:20:38] -rw------- 1 boinc boinc       817 Oct 12 13:20 pilotlog.txt
[2025-10-12 13:20:38] -rw------- 1 boinc boinc        95 Oct 12 13:20 pilot_heartbeat.json
[2025-10-12 13:20:38] -rw------- 1 boinc boinc    738915 Oct 12 13:20 log.46676269._058857.job.log.1
[2025-10-12 13:20:38] -rw------- 1 boinc boinc       357 Oct 12 13:20 output.list
[2025-10-12 13:20:38] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:20 runtime_log
[2025-10-12 13:20:38] -rw------- 1 boinc boinc   1013760 Oct 12 13:20 result.tar.gz
[2025-10-12 13:20:38] -rw-r--r-- 1 boinc boinc      8782 Oct 12 13:20 runtime_log.err
[2025-10-12 13:20:38] -rw------- 1 boinc boinc       659 Oct 12 13:20 G5gLDm2IpR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9agNDmf2Krlm.diag
[2025-10-12 13:20:38] -rw-r--r-- 1 boinc boinc     22043 Oct 12 13:20 stderr.txt
[2025-10-12 13:20:38] HITS file was successfully produced:
[2025-10-12 13:20:38] -rw------- 1 boinc boinc 194481876 Oct 12 13:19 shared/HITS.pool.root.1
[2025-10-12 13:20:38]  *** Contents of shared directory: ***
[2025-10-12 13:20:38] total 406872
[2025-10-12 13:20:38] -rw-r--r-- 2 boinc boinc 220543418 Oct 12 11:56 ATLAS.root_0
[2025-10-12 13:20:38] -rw-r--r-- 2 boinc boinc    569676 Oct 12 11:56 input.tar.gz
[2025-10-12 13:20:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:56 start_atlas.sh
[2025-10-12 13:20:38] -rw------- 1 boinc boinc 194481876 Oct 12 13:19 HITS.pool.root.1
[2025-10-12 13:20:38] -rw------- 1 boinc boinc   1013760 Oct 12 13:20 result.tar.gz
13:20:39 (2662562): run_atlas exited; CPU time 14474.026435
13:20:39 (2662562): called boinc_finish(0)

</stderr_txt>
]]>

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