Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:36:25 (1195941): wrapper (7.7.26015): starting
16:36:25 (1195941): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 16:36:25] Arguments: --nthreads 9
[2025-10-11 16:36:25] Threads: 9
[2025-10-11 16:36:25] Checking for CVMFS
[2025-10-11 16:36:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:36:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:36:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:36:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:36:28] 2.13.2.0 1539006 128291 298052 151595 3 276 32295752 32935937 32831 16776704 1 253758578 99.624 247892074 19536 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 16:36:28] CVMFS is ok
[2025-10-11 16:36:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:36:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:36:28] Further information can be found at the LHC@home message board.
[2025-10-11 16:36:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:36:28] Checking for apptainer binary...
[2025-10-11 16:36:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:36:28] Running /usr/bin/apptainer --version
[2025-10-11 16:36:28] apptainer version 1.4.3-1.el9
[2025-10-11 16:36:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:36:28] c6-12-29-4.aglt2.org
[2025-10-11 16:36:28] apptainer works
[2025-10-11 16:36:28] Set ATHENA_PROC_NUMBER=9
[2025-10-11 16:36:28] Set ATHENA_CORE_NUMBER=9
[2025-10-11 16:36:29] Starting ATLAS job with PandaID=6837328341
[2025-10-11 16:36:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:02:37]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:02:37] 2025-10-11 23:01:45,460 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:02:37] 2025-10-11 23:01:45,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:02:37] 2025-10-11 23:01:45,464 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:02:37] 2025-10-11 23:01:45,464 | INFO     | sum of square deviations: 869116449.7588661
[2025-10-11 19:02:37] 2025-10-11 23:01:45,465 | INFO     | sum of deviations: -18785282309.453896
[2025-10-11 19:02:37] 2025-10-11 23:01:45,465 | INFO     | mean x: 1760219413.2695036
[2025-10-11 19:02:37] 2025-10-11 23:01:45,465 | INFO     | mean y: 2479365.8014184395
[2025-10-11 19:02:37] 2025-10-11 23:01:45,465 | INFO     | -- intersect: 38048265536.36931
[2025-10-11 19:02:37] 2025-10-11 23:01:45,465 | INFO     | intersect: 38048265536.36931
[2025-10-11 19:02:37] 2025-10-11 23:01:45,466 | INFO     | chi2: 2.8283886790713875
[2025-10-11 19:02:37] 2025-10-11 23:01:45,466 | INFO     | sum of square deviations: 779898459.3823526
[2025-10-11 19:02:37] 2025-10-11 23:01:45,467 | INFO     | sum of deviations: -8765539095.338232
[2025-10-11 19:02:37] 2025-10-11 23:01:45,467 | INFO     | mean x: 1760219260.7794118
[2025-10-11 19:02:37] 2025-10-11 23:01:45,467 | INFO     | mean y: 2496044.5220588236
[2025-10-11 19:02:37] 2025-10-11 23:01:45,467 | INFO     | -- intersect: 19786187833.00007
[2025-10-11 19:02:37] 2025-10-11 23:01:45,467 | INFO     | intersect: 19786187833.00007
[2025-10-11 19:02:37] 2025-10-11 23:01:45,468 | INFO     | chi2: 2.070911469327822
[2025-10-11 19:02:37] 2025-10-11 23:01:45,468 | INFO     | current chi2=2.070911469327822 (change=26.781227606676012 %)
[2025-10-11 19:02:37] 2025-10-11 23:01:45,468 | INFO     | sum of square deviations: 696981035.6488537
[2025-10-11 19:02:37] 2025-10-11 23:01:45,469 | INFO     | sum of deviations: -7995920765.29008
[2025-10-11 19:02:37] 2025-10-11 23:01:45,469 | INFO     | mean x: 1760219108.2671757
[2025-10-11 19:02:37] 2025-10-11 23:01:45,469 | INFO     | mean y: 2497466.3511450384
[2025-10-11 19:02:37] 2025-10-11 23:01:45,469 | INFO     | -- intersect: 20196120821.039974
[2025-10-11 19:02:37] 2025-10-11 23:01:45,469 | INFO     | intersect: 20196120821.039974
[2025-10-11 19:02:37] 2025-10-11 23:01:45,469 | INFO     | chi2: 2.069874409577492
[2025-10-11 19:02:37] 2025-10-11 23:01:45,475 | INFO     | current chi2=2.069874409577492 (change=0.0500774545744731 %)
[2025-10-11 19:02:37] 2025-10-11 23:01:45,476 | INFO     | right removable region: 130
[2025-10-11 19:02:37] 2025-10-11 23:01:45,476 | INFO     | sum of square deviations: 779875279.3823526
[2025-10-11 19:02:37] 2025-10-11 23:01:45,477 | INFO     | sum of deviations: -43377467185.86765
[2025-10-11 19:02:37] 2025-10-11 23:01:45,477 | INFO     | mean x: 1760219565.7794118
[2025-10-11 19:02:37] 2025-10-11 23:01:45,477 | INFO     | mean y: 2520849.404411765
[2025-10-11 19:02:37] 2025-10-11 23:01:45,477 | INFO     | -- intersect: 97907748099.31744
[2025-10-11 19:02:37] 2025-10-11 23:01:45,477 | INFO     | intersect: 97907748099.31744
[2025-10-11 19:02:37] 2025-10-11 23:01:45,477 | INFO     | chi2: 1.0910336817367123
[2025-10-11 19:02:37] 2025-10-11 23:01:45,478 | INFO     | current chi2=1.0910336817367123 (change=61.42560993084872 %)
[2025-10-11 19:02:37] 2025-10-11 23:01:45,478 | INFO     | sum of square deviations: 696967860.5496198
[2025-10-11 19:02:37] 2025-10-11 23:01:45,479 | INFO     | sum of deviations: -41307226292.17558
[2025-10-11 19:02:37] 2025-10-11 23:01:45,479 | INFO     | mean x: 1760219718.2824428
[2025-10-11 19:02:37] 2025-10-11 23:01:45,479 | INFO     | mean y: 2516908.9236641224
[2025-10-11 19:02:37] 2025-10-11 23:01:45,479 | INFO     | -- intersect: 104325540024.65875
[2025-10-11 19:02:37] 2025-10-11 23:01:45,479 | INFO     | intersect: 104325540024.65875
[2025-10-11 19:02:37] 2025-10-11 23:01:45,479 | INFO     | chi2: 1.0637485853746638
[2025-10-11 19:02:37] 2025-10-11 23:01:45,480 | INFO     | current chi2=1.0637485853746638 (change=2.5008482156679186 %)
[2025-10-11 19:02:37] 2025-10-11 23:01:45,480 | INFO     | left removable region: 20
[2025-10-11 19:02:37] 2025-10-11 23:01:45,480 | INFO     | sum of square deviations: 412631388.8727271
[2025-10-11 19:02:37] 2025-10-11 23:01:45,480 | INFO     | sum of deviations: -18775925770.254543
[2025-10-11 19:02:37] 2025-10-11 23:01:45,481 | INFO     | mean x: 1760219687.7454545
[2025-10-11 19:02:37] 2025-10-11 23:01:45,481 | INFO     | mean y: 2513874.4909090907
[2025-10-11 19:02:37] 2025-10-11 23:01:45,481 | INFO     | -- intersect: 80097618337.43137
[2025-10-11 19:02:37] 2025-10-11 23:01:45,481 | INFO     | intersect: 80097618337.43137
[2025-10-11 19:02:37] 2025-10-11 23:01:45,481 | INFO     | chi2: 0.22056934269678158
[2025-10-11 19:02:37] 2025-10-11 23:01:45,481 | INFO     | -- intersect: 80097618337.43137
[2025-10-11 19:02:37] 2025-10-11 23:01:45,481 | INFO     | current memory leak: -45.50 B/s (using 110 data points, chi2=0.22)
[2025-10-11 19:02:37] 2025-10-11 23:01:45,482 | INFO     | could have reported an average CPU frequency of 2529 MHz (8 samples)
[2025-10-11 19:02:37] 2025-10-11 23:01:45,482 | INFO     | ..............................
[2025-10-11 19:02:37] 2025-10-11 23:01:45,482 | INFO     | . Timing measurements:
[2025-10-11 19:02:37] 2025-10-11 23:01:45,482 | INFO     | . get job = 0 s
[2025-10-11 19:02:37] 2025-10-11 23:01:45,482 | INFO     | . initial setup = 3 s
[2025-10-11 19:02:37] 2025-10-11 23:01:45,482 | INFO     | . payload setup = 32 s
[2025-10-11 19:02:37] 2025-10-11 23:01:45,483 | INFO     | . stage-in = 0 s
[2025-10-11 19:02:37] 2025-10-11 23:01:45,483 | INFO     | . payload execution = 8571 s
[2025-10-11 19:02:37] 2025-10-11 23:01:45,483 | INFO     | . stage-out = 1 s
[2025-10-11 19:02:37] 2025-10-11 23:01:45,483 | INFO     | . log creation = 0 s
[2025-10-11 19:02:37] 2025-10-11 23:01:45,483 | INFO     | ..............................
[2025-10-11 19:02:37] 2025-10-11 23:01:45,709 | INFO     | 
[2025-10-11 19:02:37] 2025-10-11 23:01:45,709 | INFO     | job summary report
[2025-10-11 19:02:37] 2025-10-11 23:01:45,709 | INFO     | --------------------------------------------------
[2025-10-11 19:02:37] 2025-10-11 23:01:45,709 | INFO     | PanDA job id: 6837328341
[2025-10-11 19:02:37] 2025-10-11 23:01:45,709 | INFO     | task id: 46676269
[2025-10-11 19:02:37] 2025-10-11 23:01:45,709 | INFO     | errors: (none)
[2025-10-11 19:02:37] 2025-10-11 23:01:45,709 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:02:37] 2025-10-11 23:01:45,709 | INFO     | pilot state: finished 
[2025-10-11 19:02:37] 2025-10-11 23:01:45,710 | INFO     | transexitcode: 0
[2025-10-11 19:02:37] 2025-10-11 23:01:45,710 | INFO     | exeerrorcode: 0
[2025-10-11 19:02:37] 2025-10-11 23:01:45,710 | INFO     | exeerrordiag: 
[2025-10-11 19:02:37] 2025-10-11 23:01:45,710 | INFO     | exitcode: 0
[2025-10-11 19:02:37] 2025-10-11 23:01:45,710 | INFO     | exitmsg: OK
[2025-10-11 19:02:37] 2025-10-11 23:01:45,710 | INFO     | cpuconsumptiontime: 47196 s
[2025-10-11 19:02:37] 2025-10-11 23:01:45,710 | INFO     | nevents: 400
[2025-10-11 19:02:37] 2025-10-11 23:01:45,710 | INFO     | neventsw: 0
[2025-10-11 19:02:37] 2025-10-11 23:01:45,710 | INFO     | pid: 1216489
[2025-10-11 19:02:37] 2025-10-11 23:01:45,710 | INFO     | pgrp: 1216489
[2025-10-11 19:02:37] 2025-10-11 23:01:45,710 | INFO     | corecount: 9
[2025-10-11 19:02:37] 2025-10-11 23:01:45,710 | INFO     | event service: False
[2025-10-11 19:02:37] 2025-10-11 23:01:45,710 | INFO     | sizes: {0: 2348629, 1: 2348713, 2: 2348912, 3: 2348912, 14: 2348940, 24: 2349230, 25: 2349386, 8607: 2377263, 8609: 2386317, 8620: 2386455}
[2025-10-11 19:02:37] 2025-10-11 23:01:45,710 | INFO     | --------------------------------------------------
[2025-10-11 19:02:37] 2025-10-11 23:01:45,711 | INFO     | 
[2025-10-11 19:02:37] 2025-10-11 23:01:45,711 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 19:02:37] 2025-10-11 23:01:45,737 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,737 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,737 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,737 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,737 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,738 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:02:37] 2025-10-11 23:01:45,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,738 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:02:37] 2025-10-11 23:01:45,739 | INFO     | job 6837328341 has completed (purged errors)
[2025-10-11 19:02:37] 2025-10-11 23:01:45,739 | INFO     | overall cleanup function is called
[2025-10-11 19:02:37] 2025-10-11 23:01:46,753 | INFO     | --- collectZombieJob: --- 10, [1216489]
[2025-10-11 19:02:37] 2025-10-11 23:01:46,753 | INFO     | zombie collector waiting for pid 1216489
[2025-10-11 19:02:37] 2025-10-11 23:01:46,753 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:02:37] 2025-10-11 23:01:46,753 | INFO     | collected zombie processes
[2025-10-11 19:02:37] 2025-10-11 23:01:46,753 | INFO     | will attempt to kill all subprocesses of pid=1216489
[2025-10-11 19:02:37] 2025-10-11 23:01:47,353 | INFO     | process IDs to be killed: [1216489] (in reverse order)
[2025-10-11 19:02:37] 2025-10-11 23:01:47,518 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:02:37] 2025-10-11 23:01:47,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:02:37] 2025-10-11 23:01:47,542 | INFO     | did not find any defunct processes belonging to 1216489
[2025-10-11 19:02:37] 2025-10-11 23:01:47,563 | INFO     | did not find any defunct processes belonging to 1216489
[2025-10-11 19:02:37] 2025-10-11 23:01:47,563 | INFO     | ready for new job
[2025-10-11 19:02:37] 2025-10-11 23:01:47,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:02:37] 2025-10-11 23:01:47,565 | INFO     | ***************************************
[2025-10-11 19:02:37] 2025-10-11 23:01:47,568 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:02:37] 2025-10-11 23:01:47,568 | INFO     | ***************************************
[2025-10-11 19:02:37] 2025-10-11 23:01:47,568 | INFO     | 
[2025-10-11 19:02:37] 2025-10-11 23:01:47,586 | INFO     | architecture information:
[2025-10-11 19:02:37] 2025-10-11 23:01:47,587 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:02:37] 2025-10-11 23:01:47,611 | INFO     | cat /etc/os-release:
[2025-10-11 19:02:37] NAME="CentOS Linux"
[2025-10-11 19:02:37] VERSION="7 (Core)"
[2025-10-11 19:02:37] ID="centos"
[2025-10-11 19:02:37] ID_LIKE="rhel fedora"
[2025-10-11 19:02:37] VERSION_ID="7"
[2025-10-11 19:02:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:02:37] ANSI_COLOR="0;31"
[2025-10-11 19:02:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:02:37] HOME_URL="https://www.centos.org/"
[2025-10-11 19:02:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:02:37] 
[2025-10-11 19:02:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:02:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:02:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:02:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:02:37] 
[2025-10-11 19:02:37] 2025-10-11 23:01:47,612 | INFO     | ***************************************
[2025-10-11 19:02:37] 2025-10-11 23:01:48,116 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 19:02:37] 2025-10-11 23:01:48,137 | INFO     | sufficient remaining disk space (94030004224 B)
[2025-10-11 19:02:37] 2025-10-11 23:01:48,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:02:37] 2025-10-11 23:01:48,137 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:02:37] 2025-10-11 23:01:48,138 | INFO     | update_server=False
[2025-10-11 19:02:37] 2025-10-11 23:01:48,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:02:37] 2025-10-11 23:01:48,139 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:02:37] 2025-10-11 23:01:48,144 | INFO     | all data control threads have been joined
[2025-10-11 19:02:37] 2025-10-11 23:01:48,709 | INFO     | all job control threads have been joined
[2025-10-11 19:02:37] 2025-10-11 23:01:48,800 | INFO     | all payload control threads have been joined
[2025-10-11 19:02:37] 2025-10-11 23:01:49,070 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:02:37] 2025-10-11 23:01:49,070 | INFO     | aborting loop
[2025-10-11 19:02:37] 2025-10-11 23:01:49,144 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:49,150 | INFO     | [data] control thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:49,186 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:49,534 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:49,692 | INFO     | [job] validate thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:49,717 | INFO     | [job] control thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:49,747 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:49,770 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:49,805 | INFO     | [payload] control thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:49,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:02:37] 2025-10-11 23:01:49,950 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:50,075 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:50,149 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:50,540 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:50,613 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:02:37] 2025-10-11 23:01:51,619 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:53,894 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:01:59,187 | INFO     | job.realtimelogging is not enabled
[2025-10-11 19:02:37] 2025-10-11 23:02:00,193 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:02:37] 2025-10-11 23:02:17,523 | INFO     | PID=1207762 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 19:02:37] 2025-10-11 23:02:17,523 | INFO     | .. there are 37 such processes running
[2025-10-11 19:02:37] 2025-10-11 23:02:17,524 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:02:37] 2025-10-11 23:02:17,524 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:02:37] 2025-10-11 23:02:17,524 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:02:37] 2025-10-11 23:02:31,783 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:02:37] 2025-10-11 23:02:31,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914551433024)>', '<ExcThread(monitor, started 139913911588608)>']
[2025-10-11 19:02:37] 2025-10-11 23:02:32,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:02:37] 2025-10-11 23:02:32,616 | INFO     | [monitor] control thread has ended
[2025-10-11 19:02:37] 2025-10-11 23:02:37,004 | INFO     | all workflow threads have been joined
[2025-10-11 19:02:37] 2025-10-11 23:02:37,004 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:02:37] 2025-10-11 23:02:37,004 | INFO     | traces error code: 0
[2025-10-11 19:02:37] 2025-10-11 23:02:37,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:02:37] 2025-10-11 23:02:37,245 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:02:37] 2025-10-11 23:02:37,248 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:02:37] 2025-10-11 23:02:37,251 [wrapper] pilotpid: 1207762
[2025-10-11 19:02:37] 2025-10-11 23:02:37,253 [wrapper] Pilot exit status: 0
[2025-10-11 19:02:37] 2025-10-11 23:02:37,274 [wrapper] pandaids: 6837328341
[2025-10-11 19:02:37] 2025-10-11 23:02:37,385 [wrapper] cleanup supervisor_pilot 1574643 1207763
[2025-10-11 19:02:37] 2025-10-11 23:02:37,420 [wrapper] Test setup, not cleaning
[2025-10-11 19:02:37] 2025-10-11 23:02:37,426 [wrapper] apfmon messages muted
[2025-10-11 19:02:37] 2025-10-11 23:02:37,429 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:02:37] 2025-10-11 23:02:37,459 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:02:37]  *** Error codes and diagnostics ***
[2025-10-11 19:02:37]     "exeErrorCode": 0,
[2025-10-11 19:02:37]     "exeErrorDiag": "",
[2025-10-11 19:02:37]     "pilotErrorCode": 0,
[2025-10-11 19:02:37]     "pilotErrorDiag": "",
[2025-10-11 19:02:37]  *** Listing of results directory ***
[2025-10-11 19:02:37] total 410496
[2025-10-11 19:02:37] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 06:27 pilot3.tar.gz
[2025-10-11 19:02:37] -rwx------. 1 boincer umatlas     36292 Oct  9 06:43 runpilot2-wrapper.sh
[2025-10-11 19:02:37] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 06:46 queuedata.json
[2025-10-11 19:02:37] -rw-r--r--. 1 boincer umatlas       100 Oct 11 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:02:37] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 16:36 run_atlas
[2025-10-11 19:02:37] -rw-r--r--. 1 boincer umatlas       105 Oct 11 16:36 job.xml
[2025-10-11 19:02:37] -rw-r--r--. 2 boincer umatlas 220819603 Oct 11 16:36 EVNT.46676267._000561.pool.root.1
[2025-10-11 19:02:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:36 start_atlas.sh
[2025-10-11 19:02:37] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 16:36 shared
[2025-10-11 19:02:37] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 16:36 input.tar.gz
[2025-10-11 19:02:37] -rw-r--r--. 1 boincer umatlas         0 Oct 11 16:36 boinc_lockfile
[2025-10-11 19:02:37] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 16:36 pandaJob.out
[2025-10-11 19:02:37] -rw-------. 1 boincer umatlas    975528 Oct 11 16:37 agis_schedconf.cvmfs.json
[2025-10-11 19:02:37] -rw-------. 1 boincer umatlas   1560580 Oct 11 16:37 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:02:37] drwx------. 5 boincer umatlas      4096 Oct 11 16:37 pilot3
[2025-10-11 19:02:37] -rw-------. 1 boincer umatlas 192584862 Oct 11 19:00 HITS.46676269._013718.pool.root.1
[2025-10-11 19:02:37] -rw-r--r--. 1 boincer umatlas       530 Oct 11 19:00 boinc_task_state.xml
[2025-10-11 19:02:37] -rw-------. 1 boincer umatlas      1042 Oct 11 19:01 memory_monitor_summary.json
[2025-10-11 19:02:37] -rw-------. 1 boincer umatlas    401851 Oct 11 19:01 log.46676269._013718.job.log.tgz.1
[2025-10-11 19:02:37] -rw-------. 1 boincer umatlas      7831 Oct 11 19:01 heartbeat.json
[2025-10-11 19:02:37] -rw-r--r--. 1 boincer umatlas      6860 Oct 11 19:02 init_data.xml
[2025-10-11 19:02:37] -rw-------. 1 boincer umatlas        95 Oct 11 19:02 pilot_heartbeat.json
[2025-10-11 19:02:37] -rw-r--r--. 1 boincer umatlas        27 Oct 11 19:02 wrapper_checkpoint.txt
[2025-10-11 19:02:37] -rw-------. 1 boincer umatlas      4896 Oct 11 19:02 pilotlog.txt
[2025-10-11 19:02:37] -rw-------. 1 boincer umatlas   1115298 Oct 11 19:02 log.46676269._013718.job.log.1
[2025-10-11 19:02:37] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 19:02 boinc_mmap_file
[2025-10-11 19:02:37] -rw-------. 1 boincer umatlas       357 Oct 11 19:02 output.list
[2025-10-11 19:02:37] -rw-r--r--. 1 boincer umatlas       620 Oct 11 19:02 runtime_log
[2025-10-11 19:02:37] -rw-------. 1 boincer umatlas   1536000 Oct 11 19:02 result.tar.gz
[2025-10-11 19:02:37] -rw-------. 1 boincer umatlas       654 Oct 11 19:02 TENNDmxI3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5FZNDmJJJKhn.diag
[2025-10-11 19:02:37] -rw-r--r--. 1 boincer umatlas      8713 Oct 11 19:02 runtime_log.err
[2025-10-11 19:02:37] -rw-r--r--. 1 boincer umatlas     20999 Oct 11 19:02 stderr.txt
[2025-10-11 19:02:58] HITS file was successfully produced:
[2025-10-11 19:02:58] -rw-------. 1 boincer umatlas 192584862 Oct 11 19:00 shared/HITS.pool.root.1
[2025-10-11 19:02:58]  *** Contents of shared directory: ***
[2025-10-11 19:02:58] total 405804
[2025-10-11 19:02:58] -rw-r--r--. 2 boincer umatlas 220819603 Oct 11 16:36 ATLAS.root_0
[2025-10-11 19:02:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:36 start_atlas.sh
[2025-10-11 19:02:58] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 16:36 input.tar.gz
[2025-10-11 19:02:58] -rw-------. 1 boincer umatlas 192584862 Oct 11 19:00 HITS.pool.root.1
[2025-10-11 19:02:58] -rw-------. 1 boincer umatlas   1536000 Oct 11 19:02 result.tar.gz
19:03:00 (1195941): run_atlas exited; CPU time 47566.984681
19:03:00 (1195941): called boinc_finish(0)

</stderr_txt>
]]>

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