Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-11 23:07:59 (12732): vboxwrapper version 26210
2025-10-11 23:07:59 (12732): BOINC client version: 8.2.5
2025-10-11 23:07:59 (12732): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-10-11 23:07:59 (12732): Detected: Sandbox Configuration Enabled
2025-10-11 23:07:59 (12732): Successfully copied 'init_data.xml' to the shared directory.
2025-10-11 23:07:59 (12732): Create VM. (boinc_129c68260aab8beb, slot#1)
2025-10-11 23:07:59 (12732): Setting Memory Size for VM. (4200MB)
2025-10-11 23:07:59 (12732): Setting CPU Count for VM. (2)
2025-10-11 23:08:00 (12732): Setting Chipset Options for VM.
2025-10-11 23:08:00 (12732): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-11 23:08:00 (12732): Setting Boot Options for VM.
2025-10-11 23:08:00 (12732): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-11 23:08:00 (12732): Enabling VM Network Access.
2025-10-11 23:08:00 (12732): Disabling USB Support for VM.
2025-10-11 23:08:00 (12732): Disabling COM Port Support for VM.
2025-10-11 23:08:00 (12732): Disabling Audio Support for VM.
2025-10-11 23:08:00 (12732): Disabling Clipboard Support for VM.
2025-10-11 23:08:00 (12732): Disabling Drag and Drop Support for VM.
2025-10-11 23:08:00 (12732): Adding storage controller(s) to VM.
2025-10-11 23:08:00 (12732): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-11 23:08:00 (12732): Adding VirtualBox Guest Additions to VM.
2025-10-11 23:08:00 (12732): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-11 23:08:00 (12732): forwarding host port 50945 to guest port 80
2025-10-11 23:08:01 (12732): Enabling remote desktop for VM.
2025-10-11 23:08:01 (12732): Required extension pack not installed, remote desktop not enabled.
2025-10-11 23:08:01 (12732): Enabling shared directory for VM.
2025-10-11 23:08:01 (12732): Starting VM using VBoxManage interface. (boinc_129c68260aab8beb, slot#1)
2025-10-11 23:08:04 (12732): Successfully started VM. (PID = '12807')
2025-10-11 23:08:04 (12732): Reporting VM Process ID to BOINC.
2025-10-11 23:08:04 (12732): Guest Log: BIOS: VirtualBox 7.0.14
2025-10-11 23:08:04 (12732): Guest Log: CPUID EDX: 0x178bfbff
2025-10-11 23:08:04 (12732): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-11 23:08:04 (12732): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-11 23:08:04 (12732): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-11 23:08:04 (12732): Detected: Web Application Enabled (http://localhost:50945)
2025-10-11 23:08:04 (12732): Preference change detected
2025-10-11 23:08:04 (12732): Setting CPU throttle for VM. (100%)
2025-10-11 23:08:04 (12732): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-11 23:08:06 (12732): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-11 23:08:06 (12732): Guest Log: BIOS: Booting from Hard Disk...
2025-10-11 23:08:11 (12732): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-11 23:08:11 (12732): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-11 23:08:11 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-11 23:08:27 (12732): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-11 23:08:27 (12732): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-11 23:08:51 (12732): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-11 23:08:51 (12732): Guest Log: 00:00:00.000173 main     Log opened 2025-10-12T03:08:48.731212000Z
2025-10-11 23:08:51 (12732): Guest Log: 00:00:00.000347 main     OS Product: Linux
2025-10-11 23:08:51 (12732): Guest Log: 00:00:00.000406 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-11 23:08:51 (12732): Guest Log: 00:00:00.000460 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-11 23:08:51 (12732): Guest Log: 00:00:00.000515 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-11 23:08:51 (12732): Guest Log: 00:00:00.000516 main     Process ID: 1265
2025-10-11 23:08:51 (12732): Guest Log: 00:00:00.000517 main     Package type: LINUX_64BITS_GENERIC
2025-10-11 23:08:51 (12732): Guest Log: 00:00:00.001545 main     5.2.32 r132073 started. Verbose level = 0
2025-10-11 23:08:52 (12732): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-11 23:08:52 (12732): Guest Log: [INFO] Mounting shared directory
2025-10-11 23:08:52 (12732): Guest Log: [INFO] Checking for init_data.xml
2025-10-11 23:08:58 (12732): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-11 23:08:58 (12732): Guest Log: [INFO] Detected branch: prod
2025-10-11 23:08:58 (12732): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-11 23:08:58 (12732): Guest Log: Copying input files
2025-10-11 23:08:59 (12732): Guest Log: Copied input files into RunAtlas.
2025-10-11 23:08:59 (12732): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-11 23:08:59 (12732): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-11 23:09:00 (12732): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-11 23:09:00 (12732): Guest Log: Further information can be found at the LHC@home message board.
2025-10-11 23:09:10 (12732): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-11 23:09:11 (12732): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-11 23:09:11 (12732): Guest Log: 2.6.3.0 1542 0 32100 151604 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-11 23:09:14 (12732): Guest Log: copied the webapp to /var/www
2025-10-11 23:09:14 (12732): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-11 23:09:14 (12732): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-11 23:09:15 (12732): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-11 23:09:15 (12732): Guest Log:  *** Starting ATLAS job. (PandaID=6838452718 taskID=46676269) ***
2025-10-12 00:47:29 (12732): Status Report: Elapsed Time: '6000.000000'
2025-10-12 00:47:29 (12732): Status Report: CPU Time: '11422.110000'
2025-10-12 02:26:56 (12732): Status Report: Elapsed Time: '12000.000000'
2025-10-12 02:26:56 (12732): Status Report: CPU Time: '23343.890000'
2025-10-12 02:42:42 (12732): Guest Log:  *** Job finished ***
2025-10-12 02:42:42 (12732): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:16,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:16,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:40,957 | INFO     | [monitor] cgroup control has ended
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:42,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139940833146688)>', '<ExcThread(monitor, started 139939966613248)>']
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:43,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:43,154 | INFO     | [monitor] control thread has ended
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:47,664 | INFO     | all workflow threads have been joined
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:47,664 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:47,665 | INFO     | traces error code: 0
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:47,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:47,848 [wrapper] ==== pilot stdout END ====
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:47,855 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:47,862 [wrapper] pilotpid: 5929
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:47,869 [wrapper] Pilot exit status: 0
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:47,979 [wrapper] pandaids: 6838452718
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:48,015 [wrapper] cleanup supervisor_pilot 13505 5930
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:48,020 [wrapper] Test setup, not cleaning
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:48,026 [wrapper] apfmon messages muted
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:48,030 [wrapper] ==== wrapper stdout END ====
2025-10-12 02:42:42 (12732): Guest Log: 2025-10-12 06:41:48,036 [wrapper] ==== wrapper stderr END ====
2025-10-12 02:42:42 (12732): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 02:42:42 (12732): Guest Log:     "exeErrorCode": 0,
2025-10-12 02:42:42 (12732): Guest Log:     "exeErrorDiag": "",
2025-10-12 02:42:42 (12732): Guest Log:     "pilotErrorCode": 0,
2025-10-12 02:42:42 (12732): Guest Log:     "pilotErrorDiag": "",
2025-10-12 02:42:42 (12732): Guest Log:  *** Listing of results directory ***
2025-10-12 02:42:42 (12732): Guest Log: total 193824
2025-10-12 02:42:42 (12732): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 11 13:40 pilot3.tar.gz
2025-10-12 02:42:42 (12732): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 11 13:48 queuedata.json
2025-10-12 02:42:42 (12732): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 11 13:50 runpilot2-wrapper.sh
2025-10-12 02:42:42 (12732): Guest Log: -rw-r-----. 1 atlas atlas     15120 Oct 12 03:08 start_atlas.sh
2025-10-12 02:42:42 (12732): Guest Log: -rw-r-----. 1 atlas atlas    569680 Oct 12 03:08 input.tar.gz
2025-10-12 02:42:42 (12732): Guest Log: -rw-r--r--. 1 atlas atlas      5698 Oct 12 03:08 init_data.xml
2025-10-12 02:42:42 (12732): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 03:08 EVNT.46676267._002354.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 02:42:42 (12732): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 12 03:09 pandaJob.out
2025-10-12 02:42:42 (12732): Guest Log: -rw-------. 1 atlas atlas    975496 Oct 12 03:10 agis_schedconf.cvmfs.json
2025-10-12 02:42:42 (12732): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 03:10 pilot3
2025-10-12 02:42:42 (12732): Guest Log: -rw-------. 1 atlas atlas 190545790 Oct 12 06:39 HITS.46676269._058720.pool.root.1
2025-10-12 02:42:42 (12732): Guest Log: -rw-------. 1 atlas atlas      1031 Oct 12 06:40 memory_monitor_summary.json
2025-10-12 02:42:42 (12732): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 06:40 agis_ddmendpoints.agis.ALL.json
2025-10-12 02:42:42 (12732): Guest Log: -rw-------. 1 atlas atlas    354096 Oct 12 06:40 log.46676269._058720.job.log.tgz.1
2025-10-12 02:42:42 (12732): Guest Log: -rw-------. 1 atlas atlas      7823 Oct 12 06:40 heartbeat.json
2025-10-12 02:42:42 (12732): Guest Log: -rw-------. 1 atlas atlas        95 Oct 12 06:41 pilot_heartbeat.json
2025-10-12 02:42:42 (12732): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 12 06:41 pilotlog.txt
2025-10-12 02:42:42 (12732): Guest Log: -rw-------. 1 atlas atlas   1698760 Oct 12 06:41 log.46676269._058720.job.log.1
2025-10-12 02:42:42 (12732): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 06:41 output.list
2025-10-12 02:42:42 (12732): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 06:41 runtime_log
2025-10-12 02:42:42 (12732): Guest Log: -rw-------. 1 atlas atlas   2068480 Oct 12 06:41 result.tar.gz
2025-10-12 02:42:42 (12732): Guest Log: -rw-------. 1 atlas atlas       671 Oct 12 06:41 yTkLDmYApR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3YgNDmVkhO9n.diag
2025-10-12 02:42:42 (12732): Guest Log: -rw-r--r--. 1 atlas atlas      8682 Oct 12 06:41 runtime_log.err
2025-10-12 02:42:42 (12732): Guest Log: Looking for outputfile HITS.46676269._058720.pool.root.1
2025-10-12 02:42:42 (12732): Guest Log: HITS file was successfully produced
2025-10-12 02:42:42 (12732): Guest Log: -rw-------. 1 atlas atlas 190545790 Oct 12 06:39 /home/atlas/RunAtlas/HITS.46676269._058720.pool.root.1
2025-10-12 02:42:42 (12732): Guest Log: Successfully finished the ATLAS job!
2025-10-12 02:42:42 (12732): Guest Log: Copying the results back to the shared directory!
2025-10-12 02:42:43 (12732): Guest Log:  *** Contents of shared directory: ***
2025-10-12 02:42:43 (12732): Guest Log: total 233004
2025-10-12 02:42:43 (12732): Guest Log: -rw-rw----. 1 root root 221127329 Oct 12 03:07 ATLAS.root_0
2025-10-12 02:42:43 (12732): Guest Log: -rw-rw-r--. 1 root root      5698 Oct 12 03:07 init_data.xml
2025-10-12 02:42:43 (12732): Guest Log: -rw-rw----. 1 root root    569680 Oct 12 03:07 input.tar.gz
2025-10-12 02:42:43 (12732): Guest Log: -rw-r--r--. 1 root root   2068480 Oct 12  2025 result.tar.gz
2025-10-12 02:42:43 (12732): Guest Log: -rw-rw----. 1 root root     15120 Oct 12 03:07 start_atlas.sh
2025-10-12 02:42:43 (12732): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 02:42:43 (12732): VM Completion File Detected.
2025-10-12 02:42:43 (12732): Powering off VM.
2025-10-12 02:42:43 (12732): Successfully stopped VM.
2025-10-12 02:42:43 (12732): Deregistering VM. (boinc_129c68260aab8beb, slot#1)
2025-10-12 02:42:43 (12732): Removing network bandwidth throttle group from VM.
2025-10-12 02:42:43 (12732): Removing VM from VirtualBox.
2025-10-12 02:42:49 (12732): called boinc_finish(0)

</stderr_txt>
]]>

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