Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:29:03 (3444266): wrapper (7.7.26015): starting
16:29:03 (3444266): wrapper: running run_atlas (--nthreads 10)
[2025-10-11 16:29:03] Arguments: --nthreads 10
[2025-10-11 16:29:03] Threads: 10
[2025-10-11 16:29:03] Checking for CVMFS
[2025-10-11 16:29:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:29:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:29:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:29:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:29:05] 2.13.2.0 4811 120730 322968 151595 0 68 33165124 40960001 9857 16776704 1 71525913 99.733 49212325 31825 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 16:29:05] CVMFS is ok
[2025-10-11 16:29:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:29:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:29:05] Further information can be found at the LHC@home message board.
[2025-10-11 16:29:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:29:05] Checking for apptainer binary...
[2025-10-11 16:29:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:29:05] Running /usr/bin/apptainer --version
[2025-10-11 16:29:05] apptainer version 1.4.3-1.el9
[2025-10-11 16:29:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:29:05] c-211-11.aglt2.org
[2025-10-11 16:29:05] apptainer works
[2025-10-11 16:29:05] Set ATHENA_PROC_NUMBER=10
[2025-10-11 16:29:05] Set ATHENA_CORE_NUMBER=10
[2025-10-11 16:29:06] Starting ATLAS job with PandaID=6838452729
[2025-10-11 16:29:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:59:38]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:59:38] 2025-10-11 23:59:04,680 | INFO     | time since job start (12533s) is within the limit (172800.0s)
[2025-10-11 19:59:38] 2025-10-11 23:59:04,813 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 19:59:38] 2025-10-11 23:59:04,822 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2568.5587499999997
[2025-10-11 19:59:38] 2025-10-11 23:59:04,832 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838452729/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 19:59:38] 2025-10-11 23:59:04,833 | INFO     | extracted standard info from prmon json
[2025-10-11 19:59:38] 2025-10-11 23:59:04,833 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 19:59:38] 2025-10-11 23:59:04,834 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:59:38] 2025-10-11 23:59:04,834 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:59:38] 2025-10-11 23:59:04,834 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:59:38] 2025-10-11 23:59:04,839 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:59:38] 2025-10-11 23:59:04,840 | INFO     | sum of square deviations: 2632346099.0735226
[2025-10-11 19:59:38] 2025-10-11 23:59:04,841 | INFO     | sum of deviations: -14342515024.411757
[2025-10-11 19:59:38] 2025-10-11 23:59:04,842 | INFO     | mean x: 1760220935.7205882
[2025-10-11 19:59:38] 2025-10-11 23:59:04,842 | INFO     | mean y: 2614593.431372549
[2025-10-11 19:59:38] 2025-10-11 23:59:04,842 | INFO     | -- intersect: 9593296922.682152
[2025-10-11 19:59:38] 2025-10-11 23:59:04,842 | INFO     | intersect: 9593296922.682152
[2025-10-11 19:59:38] 2025-10-11 23:59:04,842 | INFO     | chi2: 3.244039188567217
[2025-10-11 19:59:38] 2025-10-11 23:59:04,843 | INFO     | sum of square deviations: 2443500468.8241134
[2025-10-11 19:59:38] 2025-10-11 23:59:04,844 | INFO     | sum of deviations: -146034411.3718625
[2025-10-11 19:59:38] 2025-10-11 23:59:04,845 | INFO     | mean x: 1760220783.2261307
[2025-10-11 19:59:38] 2025-10-11 23:59:04,845 | INFO     | mean y: 2625827.7638190957
[2025-10-11 19:59:38] 2025-10-11 23:59:04,845 | INFO     | -- intersect: 107824418.57344085
[2025-10-11 19:59:38] 2025-10-11 23:59:04,845 | INFO     | intersect: 107824418.57344085
[2025-10-11 19:59:38] 2025-10-11 23:59:04,845 | INFO     | chi2: 2.4757000788918355
[2025-10-11 19:59:38] 2025-10-11 23:59:04,846 | INFO     | current chi2=2.4757000788918355 (change=23.684643279994745 %)
[2025-10-11 19:59:38] 2025-10-11 23:59:04,846 | INFO     | right removable region: 198
[2025-10-11 19:59:38] 2025-10-11 23:59:04,846 | INFO     | sum of square deviations: 2443497539.708536
[2025-10-11 19:59:38] 2025-10-11 23:59:04,848 | INFO     | sum of deviations: -57484896789.47235
[2025-10-11 19:59:38] 2025-10-11 23:59:04,848 | INFO     | mean x: 1760221088.2160804
[2025-10-11 19:59:38] 2025-10-11 23:59:04,848 | INFO     | mean y: 2649156.5226130653
[2025-10-11 19:59:38] 2025-10-11 23:59:04,848 | INFO     | -- intersect: 41413015215.17791
[2025-10-11 19:59:38] 2025-10-11 23:59:04,848 | INFO     | intersect: 41413015215.17791
[2025-10-11 19:59:38] 2025-10-11 23:59:04,849 | INFO     | chi2: 1.206094271039051
[2025-10-11 19:59:38] 2025-10-11 23:59:04,849 | INFO     | current chi2=1.206094271039051 (change=62.821217595347775 %)
[2025-10-11 19:59:38] 2025-10-11 23:59:04,849 | INFO     | sum of square deviations: 2263881056.969079
[2025-10-11 19:59:38] 2025-10-11 23:59:04,851 | INFO     | sum of deviations: -63306142484.4845
[2025-10-11 19:59:38] 2025-10-11 23:59:04,851 | INFO     | mean x: 1760221240.7216494
[2025-10-11 19:59:38] 2025-10-11 23:59:04,851 | INFO     | mean y: 2654059.6391752576
[2025-10-11 19:59:38] 2025-10-11 23:59:04,851 | INFO     | -- intersect: 49224682013.05511
[2025-10-11 19:59:38] 2025-10-11 23:59:04,851 | INFO     | intersect: 49224682013.05511
[2025-10-11 19:59:38] 2025-10-11 23:59:04,852 | INFO     | chi2: 1.1276001124031032
[2025-10-11 19:59:38] 2025-10-11 23:59:04,852 | INFO     | current chi2=1.1276001124031032 (change=6.508127973141353 %)
[2025-10-11 19:59:38] 2025-10-11 23:59:04,852 | INFO     | left removable region: 20
[2025-10-11 19:59:38] 2025-10-11 23:59:04,853 | INFO     | sum of square deviations: 1748689504.387643
[2025-10-11 19:59:38] 2025-10-11 23:59:04,854 | INFO     | sum of deviations: -35103406481.80903
[2025-10-11 19:59:38] 2025-10-11 23:59:04,854 | INFO     | mean x: 1760221362.713483
[2025-10-11 19:59:38] 2025-10-11 23:59:04,854 | INFO     | mean y: 2653869.337078652
[2025-10-11 19:59:38] 2025-10-11 23:59:04,854 | INFO     | -- intersect: 35337552282.26762
[2025-10-11 19:59:38] 2025-10-11 23:59:04,854 | INFO     | intersect: 35337552282.26762
[2025-10-11 19:59:38] 2025-10-11 23:59:04,855 | INFO     | chi2: 0.2837297370772003
[2025-10-11 19:59:38] 2025-10-11 23:59:04,855 | INFO     | -- intersect: 35337552282.26762
[2025-10-11 19:59:38] 2025-10-11 23:59:04,855 | INFO     | current memory leak: -20.07 B/s (using 178 data points, chi2=0.28)
[2025-10-11 19:59:38] 2025-10-11 23:59:04,856 | INFO     | could have reported an average CPU frequency of 2478 MHz (10 samples)
[2025-10-11 19:59:38] 2025-10-11 23:59:04,856 | INFO     | ..............................
[2025-10-11 19:59:38] 2025-10-11 23:59:04,856 | INFO     | . Timing measurements:
[2025-10-11 19:59:38] 2025-10-11 23:59:04,857 | INFO     | . get job = 0 s
[2025-10-11 19:59:38] 2025-10-11 23:59:04,857 | INFO     | . initial setup = 4 s
[2025-10-11 19:59:38] 2025-10-11 23:59:04,857 | INFO     | . payload setup = 36 s
[2025-10-11 19:59:38] 2025-10-11 23:59:04,857 | INFO     | . stage-in = 0 s
[2025-10-11 19:59:38] 2025-10-11 23:59:04,857 | INFO     | . payload execution = 12415 s
[2025-10-11 19:59:38] 2025-10-11 23:59:04,857 | INFO     | . stage-out = 2 s
[2025-10-11 19:59:38] 2025-10-11 23:59:04,857 | INFO     | . log creation = 0 s
[2025-10-11 19:59:38] 2025-10-11 23:59:04,857 | INFO     | ..............................
[2025-10-11 19:59:38] 2025-10-11 23:59:05,239 | INFO     | 
[2025-10-11 19:59:38] 2025-10-11 23:59:05,239 | INFO     | job summary report
[2025-10-11 19:59:38] 2025-10-11 23:59:05,239 | INFO     | --------------------------------------------------
[2025-10-11 19:59:38] 2025-10-11 23:59:05,240 | INFO     | PanDA job id: 6838452729
[2025-10-11 19:59:38] 2025-10-11 23:59:05,240 | INFO     | task id: 46676269
[2025-10-11 19:59:38] 2025-10-11 23:59:05,240 | INFO     | errors: (none)
[2025-10-11 19:59:38] 2025-10-11 23:59:05,240 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:59:38] 2025-10-11 23:59:05,240 | INFO     | pilot state: finished 
[2025-10-11 19:59:38] 2025-10-11 23:59:05,240 | INFO     | transexitcode: 0
[2025-10-11 19:59:38] 2025-10-11 23:59:05,240 | INFO     | exeerrorcode: 0
[2025-10-11 19:59:38] 2025-10-11 23:59:05,240 | INFO     | exeerrordiag: 
[2025-10-11 19:59:38] 2025-10-11 23:59:05,240 | INFO     | exitcode: 0
[2025-10-11 19:59:38] 2025-10-11 23:59:05,241 | INFO     | exitmsg: OK
[2025-10-11 19:59:38] 2025-10-11 23:59:05,241 | INFO     | cpuconsumptiontime: 57778 s
[2025-10-11 19:59:38] 2025-10-11 23:59:05,241 | INFO     | nevents: 400
[2025-10-11 19:59:38] 2025-10-11 23:59:05,241 | INFO     | neventsw: 0
[2025-10-11 19:59:38] 2025-10-11 23:59:05,241 | INFO     | pid: 3458144
[2025-10-11 19:59:38] 2025-10-11 23:59:05,241 | INFO     | pgrp: 3458144
[2025-10-11 19:59:38] 2025-10-11 23:59:05,241 | INFO     | corecount: 10
[2025-10-11 19:59:38] 2025-10-11 23:59:05,241 | INFO     | event service: False
[2025-10-11 19:59:38] 2025-10-11 23:59:05,242 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348714, 3: 2348941, 14: 2348941, 25: 2348969, 30: 2349387, 36: 2349415, 12455: 2379457, 12458: 2388455, 12460: 2388511, 12467: 
[2025-10-11 19:59:38] 2025-10-11 23:59:05,242 | INFO     | --------------------------------------------------
[2025-10-11 19:59:38] 2025-10-11 23:59:05,242 | INFO     | 
[2025-10-11 19:59:38] 2025-10-11 23:59:05,242 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 19:59:38] 2025-10-11 23:59:05,276 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,277 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,277 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,278 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,278 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,278 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,278 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,278 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,278 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,279 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,279 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:59:38] 2025-10-11 23:59:05,280 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,280 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:59:38] 2025-10-11 23:59:05,280 | INFO     | job 6838452729 has completed (purged errors)
[2025-10-11 19:59:38] 2025-10-11 23:59:05,280 | INFO     | overall cleanup function is called
[2025-10-11 19:59:38] 2025-10-11 23:59:06,017 | INFO     | PID=3448908 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 19:59:38] 2025-10-11 23:59:06,018 | INFO     | .. there are 9 such processes running
[2025-10-11 19:59:38] 2025-10-11 23:59:06,287 | INFO     | --- collectZombieJob: --- 10, [3458144]
[2025-10-11 19:59:38] 2025-10-11 23:59:06,287 | INFO     | zombie collector waiting for pid 3458144
[2025-10-11 19:59:38] 2025-10-11 23:59:06,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:59:38] 2025-10-11 23:59:06,288 | INFO     | collected zombie processes
[2025-10-11 19:59:38] 2025-10-11 23:59:06,288 | INFO     | will attempt to kill all subprocesses of pid=3458144
[2025-10-11 19:59:38] 2025-10-11 23:59:06,594 | INFO     | process IDs to be killed: [3458144] (in reverse order)
[2025-10-11 19:59:38] 2025-10-11 23:59:06,683 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:59:38] 2025-10-11 23:59:06,683 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:59:38] 2025-10-11 23:59:06,694 | INFO     | did not find any defunct processes belonging to 3458144
[2025-10-11 19:59:38] 2025-10-11 23:59:06,700 | INFO     | did not find any defunct processes belonging to 3458144
[2025-10-11 19:59:38] 2025-10-11 23:59:06,701 | INFO     | ready for new job
[2025-10-11 19:59:38] 2025-10-11 23:59:06,701 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:59:38] 2025-10-11 23:59:06,703 | INFO     | ***************************************
[2025-10-11 19:59:38] 2025-10-11 23:59:06,703 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:59:38] 2025-10-11 23:59:06,703 | INFO     | ***************************************
[2025-10-11 19:59:38] 2025-10-11 23:59:06,703 | INFO     | 
[2025-10-11 19:59:38] 2025-10-11 23:59:06,705 | INFO     | architecture information:
[2025-10-11 19:59:38] 2025-10-11 23:59:06,705 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:59:38] 2025-10-11 23:59:06,717 | INFO     | cat /etc/os-release:
[2025-10-11 19:59:38] NAME="CentOS Linux"
[2025-10-11 19:59:38] VERSION="7 (Core)"
[2025-10-11 19:59:38] ID="centos"
[2025-10-11 19:59:38] ID_LIKE="rhel fedora"
[2025-10-11 19:59:38] VERSION_ID="7"
[2025-10-11 19:59:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:59:38] ANSI_COLOR="0;31"
[2025-10-11 19:59:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:59:38] HOME_URL="https://www.centos.org/"
[2025-10-11 19:59:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:59:38] 
[2025-10-11 19:59:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:59:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:59:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:59:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:59:38] 
[2025-10-11 19:59:38] 2025-10-11 23:59:06,718 | INFO     | ***************************************
[2025-10-11 19:59:38] 2025-10-11 23:59:07,221 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 19:59:38] 2025-10-11 23:59:07,239 | INFO     | sufficient remaining disk space (63633883136 B)
[2025-10-11 19:59:38] 2025-10-11 23:59:07,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:59:38] 2025-10-11 23:59:07,240 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:59:38] 2025-10-11 23:59:07,240 | INFO     | update_server=False
[2025-10-11 19:59:38] 2025-10-11 23:59:07,240 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:59:38] 2025-10-11 23:59:07,240 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:59:38] 2025-10-11 23:59:07,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:59:38] 2025-10-11 23:59:07,241 | INFO     | aborting loop
[2025-10-11 19:59:38] 2025-10-11 23:59:07,793 | INFO     | all data control threads have been joined
[2025-10-11 19:59:38] 2025-10-11 23:59:08,207 | INFO     | all payload control threads have been joined
[2025-10-11 19:59:38] 2025-10-11 23:59:08,245 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:08,246 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:08,280 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:08,404 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:08,439 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:08,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:59:38] 2025-10-11 23:59:08,685 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:08,798 | INFO     | [data] control thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:08,859 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:08,903 | INFO     | all job control threads have been joined
[2025-10-11 19:59:38] 2025-10-11 23:59:08,984 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:09,212 | INFO     | [payload] control thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:09,246 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:09,469 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:09,597 | INFO     | [job] validate thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:09,908 | INFO     | [job] control thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:09,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:59:38] 2025-10-11 23:59:10,990 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:12,470 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:59:38] 2025-10-11 23:59:32,651 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:59:38] 2025-10-11 23:59:32,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695385900864)>', '<ExcThread(monitor, started 139695036012288)>']
[2025-10-11 19:59:38] 2025-10-11 23:59:37,677 | INFO     | all workflow threads have been joined
[2025-10-11 19:59:38] 2025-10-11 23:59:37,677 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:59:38] 2025-10-11 23:59:37,678 | INFO     | traces error code: 0
[2025-10-11 19:59:38] 2025-10-11 23:59:37,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:59:38] 2025-10-11 23:59:38,322 | INFO     | PID=3448908 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 19:59:38] 2025-10-11 23:59:38,322 | INFO     | .. there are 9 such processes running
[2025-10-11 19:59:38] 2025-10-11 23:59:38,323 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:59:38] 2025-10-11 23:59:38,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:59:38] 2025-10-11 23:59:38,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:59:38] 2025-10-11 23:59:38,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:59:38] 2025-10-11 23:59:38,323 | INFO     | [monitor] control thread has ended
[2025-10-11 19:59:38] 2025-10-11 23:59:38,430 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:59:38] 2025-10-11 23:59:38,433 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:59:38] 2025-10-11 23:59:38,437 [wrapper] pilotpid: 3448908
[2025-10-11 19:59:38] 2025-10-11 23:59:38,440 [wrapper] Pilot exit status: 0
[2025-10-11 19:59:38] 2025-10-11 23:59:38,452 [wrapper] pandaids: 6838452729
[2025-10-11 19:59:38] 2025-10-11 23:59:38,507 [wrapper] cleanup supervisor_pilot 3698561 3448909
[2025-10-11 19:59:38] 2025-10-11 23:59:38,511 [wrapper] Test setup, not cleaning
[2025-10-11 19:59:38] 2025-10-11 23:59:38,515 [wrapper] apfmon messages muted
[2025-10-11 19:59:38] 2025-10-11 23:59:38,519 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:59:38] 2025-10-11 23:59:38,523 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:59:38]  *** Error codes and diagnostics ***
[2025-10-11 19:59:38]     "exeErrorCode": 0,
[2025-10-11 19:59:38]     "exeErrorDiag": "",
[2025-10-11 19:59:38]     "pilotErrorCode": 0,
[2025-10-11 19:59:38]     "pilotErrorDiag": "",
[2025-10-11 19:59:38]  *** Listing of results directory ***
[2025-10-11 19:59:38] total 410808
[2025-10-11 19:59:38] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 09:40 pilot3.tar.gz
[2025-10-11 19:59:38] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 09:50 queuedata.json
[2025-10-11 19:59:38] -rwx------. 1 boincer umatlas     36292 Oct 11 09:50 runpilot2-wrapper.sh
[2025-10-11 19:59:38] -rw-r--r--. 1 boincer umatlas       100 Oct 11 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:59:38] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 16:29 run_atlas
[2025-10-11 19:59:38] -rw-r--r--. 1 boincer umatlas       105 Oct 11 16:29 job.xml
[2025-10-11 19:59:38] -rw-r--r--. 2 boincer umatlas 220448272 Oct 11 16:29 EVNT.46676267._002355.pool.root.1
[2025-10-11 19:59:38] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 16:29 shared
[2025-10-11 19:59:38] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 16:29 input.tar.gz
[2025-10-11 19:59:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:29 start_atlas.sh
[2025-10-11 19:59:38] -rw-r--r--. 1 boincer umatlas         0 Oct 11 16:29 boinc_lockfile
[2025-10-11 19:59:38] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 16:29 pandaJob.out
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas    975528 Oct 11 16:30 agis_schedconf.cvmfs.json
[2025-10-11 19:59:38] drwx------. 5 boincer umatlas      4096 Oct 11 16:30 pilot3
[2025-10-11 19:59:38] -rw-r--r--. 1 boincer umatlas      6615 Oct 11 19:57 init_data.xml
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas 192036191 Oct 11 19:58 HITS.46676269._058731.pool.root.1
[2025-10-11 19:59:38] -rw-r--r--. 1 boincer umatlas       531 Oct 11 19:58 boinc_task_state.xml
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas      1042 Oct 11 19:58 memory_monitor_summary.json
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas        95 Oct 11 19:58 pilot_heartbeat.json
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas   1560580 Oct 11 19:58 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas    463111 Oct 11 19:58 log.46676269._058731.job.log.tgz.1
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas      7831 Oct 11 19:59 heartbeat.json
[2025-10-11 19:59:38] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 19:59 boinc_mmap_file
[2025-10-11 19:59:38] -rw-r--r--. 1 boincer umatlas        28 Oct 11 19:59 wrapper_checkpoint.txt
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas       822 Oct 11 19:59 pilotlog.txt
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas   1678894 Oct 11 19:59 log.46676269._058731.job.log.1
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas       357 Oct 11 19:59 output.list
[2025-10-11 19:59:38] -rw-r--r--. 1 boincer umatlas       620 Oct 11 19:59 runtime_log
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas   2160640 Oct 11 19:59 result.tar.gz
[2025-10-11 19:59:38] -rw-r--r--. 1 boincer umatlas      8706 Oct 11 19:59 runtime_log.err
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas       654 Oct 11 19:59 78INDm3ApR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeZgNDmTZiQhm.diag
[2025-10-11 19:59:38] -rw-r--r--. 1 boincer umatlas     21311 Oct 11 19:59 stderr.txt
[2025-10-11 19:59:38] HITS file was successfully produced:
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas 192036191 Oct 11 19:58 shared/HITS.pool.root.1
[2025-10-11 19:59:38]  *** Contents of shared directory: ***
[2025-10-11 19:59:38] total 405512
[2025-10-11 19:59:38] -rw-r--r--. 2 boincer umatlas 220448272 Oct 11 16:29 ATLAS.root_0
[2025-10-11 19:59:38] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 16:29 input.tar.gz
[2025-10-11 19:59:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:29 start_atlas.sh
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas 192036191 Oct 11 19:58 HITS.pool.root.1
[2025-10-11 19:59:38] -rw-------. 1 boincer umatlas   2160640 Oct 11 19:59 result.tar.gz
19:59:40 (3444266): run_atlas exited; CPU time 58075.867005
19:59:40 (3444266): called boinc_finish(0)

</stderr_txt>
]]>

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