Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:04:30 (12755): wrapper (7.7.26015): starting
15:04:30 (12755): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 15:04:30] Arguments: --nthreads 8
[2025-10-11 15:04:30] Threads: 8
[2025-10-11 15:04:30] Checking for CVMFS
[2025-10-11 15:04:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 15:04:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 15:04:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 15:04:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 15:04:30] 2.11.2.0 2803 221838 116080 151593 1 59 12276913 20275201 1 130560 2 77828807 99.974 14426831 12475 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 15:04:30] CVMFS is ok
[2025-10-11 15:04:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 15:04:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 15:04:30] Further information can be found at the LHC@home message board.
[2025-10-11 15:04:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 15:04:30] Checking for apptainer binary...
[2025-10-11 15:04:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 15:04:30] Running /usr/bin/apptainer --version
[2025-10-11 15:04:30] apptainer version 1.3.2-1.el7
[2025-10-11 15:04:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 15:04:32] c-204-11.aglt2.org
[2025-10-11 15:04:32] apptainer works
[2025-10-11 15:04:32] Set ATHENA_PROC_NUMBER=8
[2025-10-11 15:04:32] Set ATHENA_CORE_NUMBER=8
[2025-10-11 15:04:32] Starting ATLAS job with PandaID=6838452659
[2025-10-11 15:04:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:13:37 (2883): wrapper (7.7.26015): starting
17:13:37 (2883): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 17:13:37] Arguments: --nthreads 8
[2025-10-11 17:13:37] Threads: 8
[2025-10-11 17:13:37] This job has been restarted, cleaning up previous attempt
[2025-10-11 17:13:37] Checking for CVMFS
[2025-10-11 17:13:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:13:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:13:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:13:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:13:38] 2.11.2.0 2797 0 28804 151597 3 1 12390294 20275201 1 130560 0 3 66.667 1291 26346 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 17:13:38] CVMFS is ok
[2025-10-11 17:13:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:13:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:13:38] Further information can be found at the LHC@home message board.
[2025-10-11 17:13:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:13:38] Checking for apptainer binary...
[2025-10-11 17:13:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:13:38] Running /usr/bin/apptainer --version
[2025-10-11 17:13:39] apptainer version 1.3.2-1.el7
[2025-10-11 17:13:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:13:41] c-204-11.aglt2.org
[2025-10-11 17:13:41] apptainer works
[2025-10-11 17:13:41] Set ATHENA_PROC_NUMBER=8
[2025-10-11 17:13:41] Set ATHENA_CORE_NUMBER=8
[2025-10-11 17:13:41] Starting ATLAS job with PandaID=6838452659
[2025-10-11 17:13:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:15:22]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:15:22] 2025-10-11 23:14:49,910 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:15:22] 2025-10-11 23:14:49,911 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:15:22] 2025-10-11 23:14:49,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:15:22] 2025-10-11 23:14:49,914 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:15:22] 2025-10-11 23:14:49,914 | INFO     | sum of square deviations: 522502820.0
[2025-10-11 19:15:22] 2025-10-11 23:14:49,915 | INFO     | sum of deviations: -9095808148.99999
[2025-10-11 19:15:22] 2025-10-11 23:14:49,915 | INFO     | mean x: 1760220872.0
[2025-10-11 19:15:22] 2025-10-11 23:14:49,915 | INFO     | mean y: 2567243.9243697478
[2025-10-11 19:15:22] 2025-10-11 23:14:49,915 | INFO     | -- intersect: 30644758517.796284
[2025-10-11 19:15:22] 2025-10-11 23:14:49,915 | INFO     | intersect: 30644758517.796284
[2025-10-11 19:15:22] 2025-10-11 23:14:49,916 | INFO     | chi2: 2.653807402136338
[2025-10-11 19:15:22] 2025-10-11 23:14:49,916 | INFO     | sum of square deviations: 459366752.5
[2025-10-11 19:15:22] 2025-10-11 23:14:49,916 | INFO     | sum of deviations: 21557216.999997407
[2025-10-11 19:15:22] 2025-10-11 23:14:49,917 | INFO     | mean x: 1760220719.5
[2025-10-11 19:15:22] 2025-10-11 23:14:49,917 | INFO     | mean y: 2588620.263157895
[2025-10-11 19:15:22] 2025-10-11 23:14:49,917 | INFO     | -- intersect: -80015224.72920051
[2025-10-11 19:15:22] 2025-10-11 23:14:49,917 | INFO     | intersect: -80015224.72920051
[2025-10-11 19:15:22] 2025-10-11 23:14:49,917 | INFO     | chi2: 1.8969916231889368
[2025-10-11 19:15:22] 2025-10-11 23:14:49,917 | INFO     | current chi2=1.8969916231889368 (change=28.518112442453734 %)
[2025-10-11 19:15:22] 2025-10-11 23:14:49,918 | INFO     | sum of square deviations: 401533110.0
[2025-10-11 19:15:22] 2025-10-11 23:14:49,918 | INFO     | sum of deviations: 1093434272.0000012
[2025-10-11 19:15:22] 2025-10-11 23:14:49,918 | INFO     | mean x: 1760220567.0
[2025-10-11 19:15:22] 2025-10-11 23:14:49,918 | INFO     | mean y: 2591448.1834862386
[2025-10-11 19:15:22] 2025-10-11 23:14:49,919 | INFO     | -- intersect: -4790750486.27635
[2025-10-11 19:15:22] 2025-10-11 23:14:49,919 | INFO     | intersect: -4790750486.27635
[2025-10-11 19:15:22] 2025-10-11 23:14:49,919 | INFO     | chi2: 1.9004908400655087
[2025-10-11 19:15:22] 2025-10-11 23:14:49,919 | INFO     | current chi2=1.9004908400655087 (change=-0.1844613773617828 %)
[2025-10-11 19:15:22] 2025-10-11 23:14:49,919 | INFO     | right removable region: 108
[2025-10-11 19:15:22] 2025-10-11 23:14:49,920 | INFO     | sum of square deviations: 459366752.5
[2025-10-11 19:15:22] 2025-10-11 23:14:49,920 | INFO     | sum of deviations: -30239600119.5
[2025-10-11 19:15:22] 2025-10-11 23:14:49,920 | INFO     | mean x: 1760221024.5
[2025-10-11 19:15:22] 2025-10-11 23:14:49,921 | INFO     | mean y: 2617523.6052631577
[2025-10-11 19:15:22] 2025-10-11 23:14:49,921 | INFO     | -- intersect: 115876001074.18474
[2025-10-11 19:15:22] 2025-10-11 23:14:49,921 | INFO     | intersect: 115876001074.18474
[2025-10-11 19:15:22] 2025-10-11 23:14:49,921 | INFO     | chi2: 0.9469717403357891
[2025-10-11 19:15:22] 2025-10-11 23:14:49,921 | INFO     | current chi2=0.9469717403357891 (change=64.3164858318856 %)
[2025-10-11 19:15:22] 2025-10-11 23:14:49,921 | INFO     | sum of square deviations: 401533110.0
[2025-10-11 19:15:22] 2025-10-11 23:14:49,922 | INFO     | sum of deviations: -31357443999.0
[2025-10-11 19:15:22] 2025-10-11 23:14:49,922 | INFO     | mean x: 1760221177.0
[2025-10-11 19:15:22] 2025-10-11 23:14:49,922 | INFO     | mean y: 2620331.1651376146
[2025-10-11 19:15:22] 2025-10-11 23:14:49,922 | INFO     | -- intersect: 137465847170.99252
[2025-10-11 19:15:22] 2025-10-11 23:14:49,922 | INFO     | intersect: 137465847170.99252
[2025-10-11 19:15:22] 2025-10-11 23:14:49,923 | INFO     | chi2: 0.8900780979487602
[2025-10-11 19:15:22] 2025-10-11 23:14:49,923 | INFO     | current chi2=0.8900780979487602 (change=6.007955672135983 %)
[2025-10-11 19:15:22] 2025-10-11 23:14:49,923 | INFO     | left removable region: 20
[2025-10-11 19:15:22] 2025-10-11 23:14:49,923 | INFO     | sum of square deviations: 211285822.0
[2025-10-11 19:15:22] 2025-10-11 23:14:49,924 | INFO     | sum of deviations: -15972010944.999998
[2025-10-11 19:15:22] 2025-10-11 23:14:49,924 | INFO     | mean x: 1760221146.5
[2025-10-11 19:15:22] 2025-10-11 23:14:49,924 | INFO     | mean y: 2638836.090909091
[2025-10-11 19:15:22] 2025-10-11 23:14:49,924 | INFO     | -- intersect: 133065383659.16023
[2025-10-11 19:15:22] 2025-10-11 23:14:49,924 | INFO     | intersect: 133065383659.16023
[2025-10-11 19:15:22] 2025-10-11 23:14:49,924 | INFO     | chi2: 0.07597055012312215
[2025-10-11 19:15:22] 2025-10-11 23:14:49,924 | INFO     | -- intersect: 133065383659.16023
[2025-10-11 19:15:22] 2025-10-11 23:14:49,925 | INFO     | current memory leak: -75.59 B/s (using 88 data points, chi2=0.08)
[2025-10-11 19:15:22] 2025-10-11 23:14:49,925 | INFO     | could have reported an average CPU frequency of 1971 MHz (7 samples)
[2025-10-11 19:15:22] 2025-10-11 23:14:49,925 | INFO     | ..............................
[2025-10-11 19:15:22] 2025-10-11 23:14:49,925 | INFO     | . Timing measurements:
[2025-10-11 19:15:22] 2025-10-11 23:14:49,925 | INFO     | . get job = 0 s
[2025-10-11 19:15:22] 2025-10-11 23:14:49,925 | INFO     | . initial setup = 1 s
[2025-10-11 19:15:22] 2025-10-11 23:14:49,926 | INFO     | . payload setup = 8 s
[2025-10-11 19:15:22] 2025-10-11 23:14:49,926 | INFO     | . stage-in = 0 s
[2025-10-11 19:15:22] 2025-10-11 23:14:49,926 | INFO     | . payload execution = 7209 s
[2025-10-11 19:15:22] 2025-10-11 23:14:49,926 | INFO     | . stage-out = 2 s
[2025-10-11 19:15:22] 2025-10-11 23:14:49,926 | INFO     | . log creation = 0 s
[2025-10-11 19:15:22] 2025-10-11 23:14:49,926 | INFO     | ..............................
[2025-10-11 19:15:22] 2025-10-11 23:14:50,017 | INFO     | 
[2025-10-11 19:15:22] 2025-10-11 23:14:50,017 | INFO     | job summary report
[2025-10-11 19:15:22] 2025-10-11 23:14:50,017 | INFO     | --------------------------------------------------
[2025-10-11 19:15:22] 2025-10-11 23:14:50,017 | INFO     | PanDA job id: 6838452659
[2025-10-11 19:15:22] 2025-10-11 23:14:50,018 | INFO     | task id: 46676269
[2025-10-11 19:15:22] 2025-10-11 23:14:50,018 | INFO     | errors: (none)
[2025-10-11 19:15:22] 2025-10-11 23:14:50,018 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:15:22] 2025-10-11 23:14:50,018 | INFO     | pilot state: finished 
[2025-10-11 19:15:22] 2025-10-11 23:14:50,018 | INFO     | transexitcode: 0
[2025-10-11 19:15:22] 2025-10-11 23:14:50,018 | INFO     | exeerrorcode: 0
[2025-10-11 19:15:22] 2025-10-11 23:14:50,018 | INFO     | exeerrordiag: 
[2025-10-11 19:15:22] 2025-10-11 23:14:50,018 | INFO     | exitcode: 0
[2025-10-11 19:15:22] 2025-10-11 23:14:50,018 | INFO     | exitmsg: OK
[2025-10-11 19:15:22] 2025-10-11 23:14:50,019 | INFO     | cpuconsumptiontime: 52659 s
[2025-10-11 19:15:22] 2025-10-11 23:14:50,019 | INFO     | nevents: 400
[2025-10-11 19:15:22] 2025-10-11 23:14:50,019 | INFO     | neventsw: 0
[2025-10-11 19:15:22] 2025-10-11 23:14:50,019 | INFO     | pid: 14783
[2025-10-11 19:15:22] 2025-10-11 23:14:50,019 | INFO     | pgrp: 14783
[2025-10-11 19:15:22] 2025-10-11 23:14:50,019 | INFO     | corecount: 8
[2025-10-11 19:15:22] 2025-10-11 23:14:50,019 | INFO     | event service: False
[2025-10-11 19:15:22] 2025-10-11 23:14:50,019 | INFO     | sizes: {0: 2348856, 1: 2348856, 8: 2349146, 11: 2349174, 7221: 2376601, 7222: 2376600, 7224: 2385838, 7231: 2385976}
[2025-10-11 19:15:22] 2025-10-11 23:14:50,020 | INFO     | --------------------------------------------------
[2025-10-11 19:15:22] 2025-10-11 23:14:50,020 | INFO     | 
[2025-10-11 19:15:22] 2025-10-11 23:14:50,020 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 19:15:22] 2025-10-11 23:14:50,048 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,049 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,049 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,049 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,050 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,050 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,051 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,051 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,051 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,051 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,051 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,052 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,052 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:15:22] 2025-10-11 23:14:50,052 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,052 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:15:22] 2025-10-11 23:14:50,052 | INFO     | job 6838452659 has completed (purged errors)
[2025-10-11 19:15:22] 2025-10-11 23:14:50,053 | INFO     | overall cleanup function is called
[2025-10-11 19:15:22] 2025-10-11 23:14:51,061 | INFO     | --- collectZombieJob: --- 10, [14783]
[2025-10-11 19:15:22] 2025-10-11 23:14:51,061 | INFO     | zombie collector waiting for pid 14783
[2025-10-11 19:15:22] 2025-10-11 23:14:51,061 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:15:22] 2025-10-11 23:14:51,061 | INFO     | collected zombie processes
[2025-10-11 19:15:22] 2025-10-11 23:14:51,062 | INFO     | will attempt to kill all subprocesses of pid=14783
[2025-10-11 19:15:22] 2025-10-11 23:14:51,148 | INFO     | process IDs to be killed: [14783] (in reverse order)
[2025-10-11 19:15:22] 2025-10-11 23:14:51,202 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:15:22] 2025-10-11 23:14:51,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:15:22] 2025-10-11 23:14:51,207 | INFO     | did not find any defunct processes belonging to 14783
[2025-10-11 19:15:22] 2025-10-11 23:14:51,211 | INFO     | did not find any defunct processes belonging to 14783
[2025-10-11 19:15:22] 2025-10-11 23:14:51,211 | INFO     | ready for new job
[2025-10-11 19:15:22] 2025-10-11 23:14:51,212 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:15:22] 2025-10-11 23:14:51,213 | INFO     | ***************************************
[2025-10-11 19:15:22] 2025-10-11 23:14:51,214 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:15:22] 2025-10-11 23:14:51,214 | INFO     | ***************************************
[2025-10-11 19:15:22] 2025-10-11 23:14:51,214 | INFO     | 
[2025-10-11 19:15:22] 2025-10-11 23:14:51,214 | INFO     | architecture information:
[2025-10-11 19:15:22] 2025-10-11 23:14:51,215 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:15:22] 2025-10-11 23:14:51,232 | INFO     | cat /etc/os-release:
[2025-10-11 19:15:22] NAME="CentOS Linux"
[2025-10-11 19:15:22] VERSION="7 (Core)"
[2025-10-11 19:15:22] ID="centos"
[2025-10-11 19:15:22] ID_LIKE="rhel fedora"
[2025-10-11 19:15:22] VERSION_ID="7"
[2025-10-11 19:15:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:15:22] ANSI_COLOR="0;31"
[2025-10-11 19:15:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:15:22] HOME_URL="https://www.centos.org/"
[2025-10-11 19:15:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:15:22] 
[2025-10-11 19:15:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:15:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:15:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:15:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:15:22] 
[2025-10-11 19:15:22] 2025-10-11 23:14:51,232 | INFO     | ***************************************
[2025-10-11 19:15:22] 2025-10-11 23:14:51,735 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 19:15:22] 2025-10-11 23:14:51,755 | INFO     | sufficient remaining disk space (18596495360 B)
[2025-10-11 19:15:22] 2025-10-11 23:14:51,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:15:22] 2025-10-11 23:14:51,755 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:15:22] 2025-10-11 23:14:51,756 | INFO     | update_server=False
[2025-10-11 19:15:22] 2025-10-11 23:14:51,756 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:15:22] 2025-10-11 23:14:51,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:15:22] 2025-10-11 23:14:51,757 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:15:22] 2025-10-11 23:14:51,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:15:22] 2025-10-11 23:14:51,757 | INFO     | aborting loop
[2025-10-11 19:15:22] 2025-10-11 23:14:51,761 | INFO     | all payload control threads have been joined
[2025-10-11 19:15:22] 2025-10-11 23:14:52,760 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:14:52,761 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:14:52,763 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:14:52,767 | INFO     | [payload] control thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:14:52,829 | INFO     | all data control threads have been joined
[2025-10-11 19:15:22] 2025-10-11 23:14:52,893 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:14:53,056 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:14:53,126 | INFO     | all job control threads have been joined
[2025-10-11 19:15:22] 2025-10-11 23:14:53,331 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:14:53,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:15:22] 2025-10-11 23:14:53,715 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:14:53,762 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:14:53,780 | INFO     | [job] validate thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:14:53,832 | INFO     | [data] control thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:14:53,930 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:14:54,084 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:14:54,131 | INFO     | [job] control thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:14:57,708 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:15:02,656 | INFO     | job.realtimelogging is not enabled
[2025-10-11 19:15:22] 2025-10-11 23:15:03,661 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:15:22] 2025-10-11 23:15:12,535 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:15:22] 2025-10-11 23:15:14,406 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140512050382656)>', '<ExcThread(monitor, started 140510719108864)>']
[2025-10-11 19:15:22] 2025-10-11 23:15:19,431 | INFO     | all workflow threads have been joined
[2025-10-11 19:15:22] 2025-10-11 23:15:19,432 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:15:22] 2025-10-11 23:15:19,432 | INFO     | traces error code: 0
[2025-10-11 19:15:22] 2025-10-11 23:15:19,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:15:22] 2025-10-11 23:15:22,509 | INFO     | PID=8312 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 19:15:22] 2025-10-11 23:15:22,509 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:15:22] 2025-10-11 23:15:22,509 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:15:22] 2025-10-11 23:15:22,510 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:15:22] 2025-10-11 23:15:22,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:15:22] 2025-10-11 23:15:22,510 | INFO     | [monitor] control thread has ended
[2025-10-11 19:15:22] 2025-10-11 23:15:22,617 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:15:22] 2025-10-11 23:15:22,621 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:15:22] 2025-10-11 23:15:22,626 [wrapper] pilotpid: 8312
[2025-10-11 19:15:22] 2025-10-11 23:15:22,630 [wrapper] Pilot exit status: 0
[2025-10-11 19:15:22] 2025-10-11 23:15:22,688 [wrapper] pandaids: 6838452659 6838452659
[2025-10-11 19:15:22] 2025-10-11 23:15:22,732 [wrapper] cleanup supervisor_pilot 15855 8313
[2025-10-11 19:15:22] 2025-10-11 23:15:22,737 [wrapper] Test setup, not cleaning
[2025-10-11 19:15:22] 2025-10-11 23:15:22,743 [wrapper] apfmon messages muted
[2025-10-11 19:15:22] 2025-10-11 23:15:22,747 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:15:22] 2025-10-11 23:15:22,752 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:15:22]  *** Error codes and diagnostics ***
[2025-10-11 19:15:22]     "exeErrorCode": 0,
[2025-10-11 19:15:22]     "exeErrorDiag": "",
[2025-10-11 19:15:22]     "pilotErrorCode": 0,
[2025-10-11 19:15:22]     "pilotErrorDiag": "",
[2025-10-11 19:15:22]  *** Listing of results directory ***
[2025-10-11 19:15:22] total 621768
[2025-10-11 19:15:22] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 19:15:22] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 09:40 pilot3.tar.gz
[2025-10-11 19:15:22] -rwx------ 1 boincer umatlas     36292 Oct 11 09:45 runpilot2-wrapper.sh
[2025-10-11 19:15:22] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 09:45 queuedata.json
[2025-10-11 19:15:22] -rw-r--r-- 1 boincer umatlas       100 Oct 11 15:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:15:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 15:04 run_atlas
[2025-10-11 19:15:22] -rw-r--r-- 1 boincer umatlas       105 Oct 11 15:04 job.xml
[2025-10-11 19:15:22] -rw-r--r-- 3 boincer umatlas 218853593 Oct 11 15:04 EVNT.46676267._002352.pool.root.1
[2025-10-11 19:15:22] -rw-r--r-- 3 boincer umatlas 218853593 Oct 11 15:04 ATLAS.root_0
[2025-10-11 19:15:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 15:04 start_atlas.sh
[2025-10-11 19:15:22] drwxrwx--x 2 boincer umatlas      4096 Oct 11 15:04 shared
[2025-10-11 19:15:22] -rw-r--r-- 2 boincer umatlas    569676 Oct 11 15:04 input.tar.gz
[2025-10-11 19:15:22] -rw-r--r-- 1 boincer umatlas         0 Oct 11 15:04 boinc_lockfile
[2025-10-11 19:15:22] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 17:13 pandaJob.out
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas    975528 Oct 11 17:14 agis_schedconf.cvmfs.json
[2025-10-11 19:15:22] -rw-r--r-- 1 boincer umatlas      5911 Oct 11 19:09 init_data.xml
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas 192307648 Oct 11 19:14 HITS.46676269._058661.pool.root.1
[2025-10-11 19:15:22] -rw-r--r-- 1 boincer umatlas       532 Oct 11 19:14 boinc_task_state.xml
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas      1048 Oct 11 19:14 memory_monitor_summary.json
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas   1560580 Oct 11 19:14 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas    366281 Oct 11 19:14 log.46676269._058661.job.log.tgz.1
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas        96 Oct 11 19:14 pilot_heartbeat.json
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas      7865 Oct 11 19:14 heartbeat.json
[2025-10-11 19:15:22] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 19:14 boinc_mmap_file
[2025-10-11 19:15:22] -rw-r--r-- 1 boincer umatlas        29 Oct 11 19:14 wrapper_checkpoint.txt
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas       744 Oct 11 19:15 pilotlog.txt
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas   1019468 Oct 11 19:15 log.46676269._058661.job.log.1
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas       357 Oct 11 19:15 output.list
[2025-10-11 19:15:22] -rw-r--r-- 1 boincer umatlas       620 Oct 11 19:15 runtime_log
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas   1402880 Oct 11 19:15 result.tar.gz
[2025-10-11 19:15:22] -rw-r--r-- 1 boincer umatlas      8788 Oct 11 19:15 runtime_log.err
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas       785 Oct 11 19:15 Az7LDms5oR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkXgNDmE0Ze9n.diag
[2025-10-11 19:15:22] -rw-r--r-- 1 boincer umatlas     22994 Oct 11 19:15 stderr.txt
[2025-10-11 19:15:22] HITS file was successfully produced:
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas 192307648 Oct 11 19:14 shared/HITS.pool.root.1
[2025-10-11 19:15:22]  *** Contents of shared directory: ***
[2025-10-11 19:15:22] total 403484
[2025-10-11 19:15:22] -rw-r--r-- 3 boincer umatlas 218853593 Oct 11 15:04 ATLAS.root_0
[2025-10-11 19:15:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 15:04 start_atlas.sh
[2025-10-11 19:15:22] -rw-r--r-- 2 boincer umatlas    569676 Oct 11 15:04 input.tar.gz
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas 192307648 Oct 11 19:14 HITS.pool.root.1
[2025-10-11 19:15:22] -rw------- 1 boincer umatlas   1402880 Oct 11 19:15 result.tar.gz
19:15:24 (2883): run_atlas exited; CPU time 52675.388452
19:15:24 (2883): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN