Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:31:08 (618175): wrapper (7.7.26015): starting
14:31:08 (618175): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 14:31:08] Arguments: --nthreads 3
[2025-10-13 14:31:08] Threads: 3
[2025-10-13 14:31:08] Checking for CVMFS
[2025-10-13 14:31:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:31:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:31:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:31:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:31:49] 2.11.5.0 618394 0 30924 151650 3 1 13643667 15728641 0 130560 0 0 0.000 1293 63 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 14:31:49] CVMFS is ok
[2025-10-13 14:31:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:31:49] Checking for apptainer binary...
[2025-10-13 14:31:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:31:49] Running /usr/bin/apptainer --version
[2025-10-13 14:31:49] apptainer version 1.3.4-1.el9
[2025-10-13 14:31:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:31:49] testio003
[2025-10-13 14:31:49] apptainer works
[2025-10-13 14:31:49] Set ATHENA_PROC_NUMBER=3
[2025-10-13 14:31:49] Set ATHENA_CORE_NUMBER=3
[2025-10-13 14:31:49] Starting ATLAS job with PandaID=6838452586
[2025-10-13 14:31:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:29:41]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:29:42] 2025-10-13 07:29:03,766 | INFO     | time since job start (6939s) is within the limit (172800.0s)
[2025-10-13 16:29:42] 2025-10-13 07:29:04,448 | INFO     | monitor loop #535: job 0:6838452586 is in state 'finished'
[2025-10-13 16:29:42] 2025-10-13 07:29:04,448 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 16:29:42] 2025-10-13 07:29:04,990 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 16:29:42] 2025-10-13 07:29:04,990 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3499.33525
[2025-10-13 16:29:42] 2025-10-13 07:29:04,991 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6838452586/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:29:42] 2025-10-13 07:29:04,991 | INFO     | extracted standard info from prmon json
[2025-10-13 16:29:42] 2025-10-13 07:29:04,991 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 16:29:42] 2025-10-13 07:29:04,991 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 16:29:42] 2025-10-13 07:29:04,991 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 16:29:42] 2025-10-13 07:29:04,992 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 16:29:42] 2025-10-13 07:29:04,992 | INFO     | fitting pss+swap vs Time
[2025-10-13 16:29:42] 2025-10-13 07:29:04,993 | INFO     | sum of square deviations: 447385842.92035353
[2025-10-13 16:29:42] 2025-10-13 07:29:04,993 | INFO     | sum of deviations: -17953353052.831852
[2025-10-13 16:29:42] 2025-10-13 07:29:04,993 | INFO     | mean x: 1760337045.0265486
[2025-10-13 16:29:42] 2025-10-13 07:29:04,993 | INFO     | mean y: 2486970.610619469
[2025-10-13 16:29:42] 2025-10-13 07:29:04,993 | INFO     | -- intersect: 70643865014.7673
[2025-10-13 16:29:42] 2025-10-13 07:29:04,993 | INFO     | intersect: 70643865014.7673
[2025-10-13 16:29:42] 2025-10-13 07:29:04,993 | INFO     | chi2: 2.933452079112115
[2025-10-13 16:29:42] 2025-10-13 07:29:04,993 | INFO     | sum of square deviations: 390585692.91666734
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | sum of deviations: -8802651105.138887
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | mean x: 1760336892.5277777
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | mean y: 2510926.546296296
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | -- intersect: 39675319668.49998
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | intersect: 39675319668.49998
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | chi2: 2.3017451306288366
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | current chi2=2.3017451306288366 (change=21.53459239990315 %)
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | right removable region: 107
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | sum of square deviations: 390583862.91666734
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | sum of deviations: -40169165144.47222
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | mean x: 1760337197.5277777
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | mean y: 2545923.9907407407
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | -- intersect: 181042476937.56992
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | intersect: 181042476937.56992
[2025-10-13 16:29:42] 2025-10-13 07:29:04,994 | INFO     | chi2: 0.8808268132832842
[2025-10-13 16:29:42] 2025-10-13 07:29:04,995 | INFO     | current chi2=0.8808268132832842 (change=69.97302872082747 %)
[2025-10-13 16:29:42] 2025-10-13 07:29:04,995 | INFO     | sum of square deviations: 338805232.9126208
[2025-10-13 16:29:42] 2025-10-13 07:29:04,995 | INFO     | sum of deviations: -38283749153.66019
[2025-10-13 16:29:42] 2025-10-13 07:29:04,995 | INFO     | mean x: 1760337350.0291262
[2025-10-13 16:29:42] 2025-10-13 07:29:04,995 | INFO     | mean y: 2540304.5533980583
[2025-10-13 16:29:42] 2025-10-13 07:29:04,995 | INFO     | -- intersect: 198914206913.0639
[2025-10-13 16:29:42] 2025-10-13 07:29:04,995 | INFO     | intersect: 198914206913.0639
[2025-10-13 16:29:42] 2025-10-13 07:29:04,995 | INFO     | chi2: 0.8536762015811972
[2025-10-13 16:29:42] 2025-10-13 07:29:04,995 | INFO     | current chi2=0.8536762015811972 (change=3.082400682250239 %)
[2025-10-13 16:29:42] 2025-10-13 07:29:04,995 | INFO     | left removable region: 20
[2025-10-13 16:29:42] 2025-10-13 07:29:04,995 | INFO     | sum of square deviations: 204163836.8965514
[2025-10-13 16:29:42] 2025-10-13 07:29:04,995 | INFO     | sum of deviations: -23469637593.517246
[2025-10-13 16:29:42] 2025-10-13 07:29:04,995 | INFO     | mean x: 1760337472.0344827
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | mean y: 2552303.83908046
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | -- intersect: 202362006058.96915
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | intersect: 202362006058.96915
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | chi2: 0.1603073223921262
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | -- intersect: 202362006058.96915
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | current memory leak: -114.95 B/s (using 87 data points, chi2=0.16)
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | could have reported an average CPU frequency of 3548 MHz (7 samples)
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | ..............................
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | . Timing measurements:
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | . get job = 0 s
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | . initial setup = 8 s
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | . payload setup = 5 s
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | . stage-in = 0 s
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | . payload execution = 6840 s
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | . stage-out = 0 s
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | . log creation = 0 s
[2025-10-13 16:29:42] 2025-10-13 07:29:04,996 | INFO     | ..............................
[2025-10-13 16:29:42] 2025-10-13 07:29:05,347 | INFO     | 
[2025-10-13 16:29:42] 2025-10-13 07:29:05,347 | INFO     | job summary report
[2025-10-13 16:29:42] 2025-10-13 07:29:05,347 | INFO     | --------------------------------------------------
[2025-10-13 16:29:42] 2025-10-13 07:29:05,347 | INFO     | PanDA job id: 6838452586
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | task id: 46676269
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | errors: (none)
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | pilot state: finished 
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | transexitcode: 0
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | exeerrorcode: 0
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | exeerrordiag: 
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | exitcode: 0
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | exitmsg: OK
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | cpuconsumptiontime: 19206 s
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | nevents: 400
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | neventsw: 0
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | pid: 628977
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | pgrp: 628977
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | corecount: 3
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | event service: False
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 6846: 2376377, 6847: 2385375, 6848: 2385431, 6926: 2385753}
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | --------------------------------------------------
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | 
[2025-10-13 16:29:42] 2025-10-13 07:29:05,348 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-13 16:29:42] 2025-10-13 07:29:05,360 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,360 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,360 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,360 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,360 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,360 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,360 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,360 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,360 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,360 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,360 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,360 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,361 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,361 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,361 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,361 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,361 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,361 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:29:42] 2025-10-13 07:29:05,361 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,361 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:29:42] 2025-10-13 07:29:05,361 | INFO     | job 6838452586 has completed (purged errors)
[2025-10-13 16:29:42] 2025-10-13 07:29:05,361 | INFO     | overall cleanup function is called
[2025-10-13 16:29:42] 2025-10-13 07:29:06,367 | INFO     | --- collectZombieJob: --- 10, [628977]
[2025-10-13 16:29:42] 2025-10-13 07:29:06,367 | INFO     | zombie collector waiting for pid 628977
[2025-10-13 16:29:42] 2025-10-13 07:29:06,367 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:29:42] 2025-10-13 07:29:06,367 | INFO     | collected zombie processes
[2025-10-13 16:29:42] 2025-10-13 07:29:06,367 | INFO     | will attempt to kill all subprocesses of pid=628977
[2025-10-13 16:29:42] 2025-10-13 07:29:06,407 | INFO     | process IDs to be killed: [628977] (in reverse order)
[2025-10-13 16:29:42] 2025-10-13 07:29:06,428 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:29:42] 2025-10-13 07:29:06,428 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:29:42] 2025-10-13 07:29:06,429 | INFO     | did not find any defunct processes belonging to 628977
[2025-10-13 16:29:42] 2025-10-13 07:29:06,430 | INFO     | did not find any defunct processes belonging to 628977
[2025-10-13 16:29:42] 2025-10-13 07:29:06,431 | INFO     | ready for new job
[2025-10-13 16:29:42] 2025-10-13 07:29:06,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:29:42] 2025-10-13 07:29:06,431 | INFO     | ***************************************
[2025-10-13 16:29:42] 2025-10-13 07:29:06,432 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:29:42] 2025-10-13 07:29:06,432 | INFO     | ***************************************
[2025-10-13 16:29:42] 2025-10-13 07:29:06,432 | INFO     | 
[2025-10-13 16:29:42] 2025-10-13 07:29:06,443 | INFO     | architecture information:
[2025-10-13 16:29:42] 2025-10-13 07:29:06,444 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:29:42] 2025-10-13 07:29:06,452 | INFO     | cat /etc/os-release:
[2025-10-13 16:29:42] NAME="CentOS Linux"
[2025-10-13 16:29:42] VERSION="7 (Core)"
[2025-10-13 16:29:42] ID="centos"
[2025-10-13 16:29:42] ID_LIKE="rhel fedora"
[2025-10-13 16:29:42] VERSION_ID="7"
[2025-10-13 16:29:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:29:42] ANSI_COLOR="0;31"
[2025-10-13 16:29:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:29:42] HOME_URL="https://www.centos.org/"
[2025-10-13 16:29:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:29:42] 
[2025-10-13 16:29:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:29:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:29:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:29:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:29:42] 
[2025-10-13 16:29:42] 2025-10-13 07:29:06,452 | INFO     | ***************************************
[2025-10-13 16:29:42] 2025-10-13 07:29:06,955 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-13 16:29:42] 2025-10-13 07:29:06,963 | INFO     | sufficient remaining disk space (40167800832 B)
[2025-10-13 16:29:42] 2025-10-13 07:29:06,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:29:42] 2025-10-13 07:29:06,964 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:29:42] 2025-10-13 07:29:06,964 | INFO     | update_server=False
[2025-10-13 16:29:42] 2025-10-13 07:29:06,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:29:42] 2025-10-13 07:29:06,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:29:42] 2025-10-13 07:29:06,973 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:29:42] 2025-10-13 07:29:07,119 | INFO     | all data control threads have been joined
[2025-10-13 16:29:42] 2025-10-13 07:29:07,582 | INFO     | all job control threads have been joined
[2025-10-13 16:29:42] 2025-10-13 07:29:07,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:29:42] 2025-10-13 07:29:07,957 | INFO     | aborting loop
[2025-10-13 16:29:42] 2025-10-13 07:29:07,968 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:07,969 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:07,983 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:08,033 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:08,123 | INFO     | [data] control thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:08,266 | INFO     | all payload control threads have been joined
[2025-10-13 16:29:42] 2025-10-13 07:29:08,465 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:08,587 | INFO     | [job] control thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:08,962 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:08,978 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:09,059 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:09,271 | INFO     | [payload] control thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:09,305 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:09,377 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:09,446 | INFO     | [job] validate thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:10,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:29:42] 2025-10-13 07:29:14,161 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:17,704 | INFO     | job.realtimelogging is not enabled
[2025-10-13 16:29:42] 2025-10-13 07:29:18,710 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:29:42] 2025-10-13 07:29:35,376 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:29:42] 2025-10-13 07:29:36,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139682306271040)>', '<ExcThread(monitor, started 139681580701440)>']
[2025-10-13 16:29:42] 2025-10-13 07:29:36,883 | INFO     | PID=622439 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 16:29:42] 2025-10-13 07:29:36,883 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:29:42] 2025-10-13 07:29:36,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:29:42] 2025-10-13 07:29:36,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:29:42] 2025-10-13 07:29:36,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:29:42] 2025-10-13 07:29:36,883 | INFO     | [monitor] control thread has ended
[2025-10-13 16:29:42] 2025-10-13 07:29:41,880 | INFO     | all workflow threads have been joined
[2025-10-13 16:29:42] 2025-10-13 07:29:41,880 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:29:42] 2025-10-13 07:29:41,881 | INFO     | traces error code: 0
[2025-10-13 16:29:42] 2025-10-13 07:29:41,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:29:42] 2025-10-13 07:29:41,940 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:29:42] 2025-10-13 07:29:41,942 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:29:42] 2025-10-13 07:29:41,943 [wrapper] pilotpid: 622439
[2025-10-13 16:29:42] 2025-10-13 07:29:41,945 [wrapper] Pilot exit status: 0
[2025-10-13 16:29:42] 2025-10-13 07:29:41,950 [wrapper] pandaids: 6838452586
[2025-10-13 16:29:42] 2025-10-13 07:29:41,963 [wrapper] cleanup supervisor_pilot  643191 622440
[2025-10-13 16:29:42] 2025-10-13 07:29:41,965 [wrapper] Test setup, not cleaning
[2025-10-13 16:29:42] 2025-10-13 07:29:41,967 [wrapper] apfmon messages muted
[2025-10-13 16:29:42] 2025-10-13 07:29:41,968 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:29:42] 2025-10-13 07:29:41,970 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:29:42]  *** Error codes and diagnostics ***
[2025-10-13 16:29:42]     "exeErrorCode": 0,
[2025-10-13 16:29:42]     "exeErrorDiag": "",
[2025-10-13 16:29:42]     "pilotErrorCode": 0,
[2025-10-13 16:29:42]     "pilotErrorDiag": "",
[2025-10-13 16:29:42]  *** Listing of results directory ***
[2025-10-13 16:29:42] total 409800
[2025-10-13 16:29:42] -rw-r--r--. 1 boinc boinc    557409 Oct 11 22:40 pilot3.tar.gz
[2025-10-13 16:29:42] -rw-r--r--. 1 boinc boinc      5112 Oct 11 22:45 queuedata.json
[2025-10-13 16:29:42] -rwx------. 1 boinc boinc     36292 Oct 11 22:46 runpilot2-wrapper.sh
[2025-10-13 16:29:42] -rw-r--r--. 1 boinc boinc       100 Oct 13 14:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:29:42] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 14:31 run_atlas
[2025-10-13 16:29:42] -rw-r--r--. 1 boinc boinc       105 Oct 13 14:31 job.xml
[2025-10-13 16:29:42] -rw-r--r--. 2 boinc boinc     15120 Oct 13 14:31 start_atlas.sh
[2025-10-13 16:29:42] drwxrwx--x. 2 boinc boinc        68 Oct 13 14:31 shared
[2025-10-13 16:29:42] -rw-r--r--. 2 boinc boinc    569683 Oct 13 14:31 input.tar.gz
[2025-10-13 16:29:42] -rw-r--r--. 1 boinc boinc      9291 Oct 13 14:31 init_data.xml
[2025-10-13 16:29:42] -rw-r--r--. 2 boinc boinc 221469314 Oct 13 14:31 EVNT.46676267._002349.pool.root.1
[2025-10-13 16:29:42] -rw-r--r--. 1 boinc boinc         0 Oct 13 14:31 boinc_lockfile
[2025-10-13 16:29:42] -rw-r--r--. 1 boinc boinc      2550 Oct 13 14:31 pandaJob.out
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc    973230 Oct 13 14:33 agis_schedconf.cvmfs.json
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc   1560580 Oct 13 14:33 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:29:42] drwx------. 5 boinc boinc      4096 Oct 13 14:33 pilot3
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc 191751491 Oct 13 16:27 HITS.46676269._058588.pool.root.1
[2025-10-13 16:29:42] -rw-r--r--. 1 boinc boinc       529 Oct 13 16:27 boinc_task_state.xml
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc      1010 Oct 13 16:27 memory_monitor_summary.json
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc    281488 Oct 13 16:27 log.46676269._058588.job.log.tgz.1
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc        95 Oct 13 16:28 pilot_heartbeat.json
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc      7768 Oct 13 16:29 heartbeat.json
[2025-10-13 16:29:42] -rw-r--r--. 1 boinc boinc      8192 Oct 13 16:29 boinc_mmap_file
[2025-10-13 16:29:42] -rw-r--r--. 1 boinc boinc        27 Oct 13 16:29 wrapper_checkpoint.txt
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc      4819 Oct 13 16:29 pilotlog.txt
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc    982453 Oct 13 16:29 log.46676269._058588.job.log.1
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc       357 Oct 13 16:29 output.list
[2025-10-13 16:29:42] -rw-r--r--. 1 boinc boinc       620 Oct 13 16:29 runtime_log
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc   1280000 Oct 13 16:29 result.tar.gz
[2025-10-13 16:29:42] -rw-r--r--. 1 boinc boinc      8661 Oct 13 16:29 runtime_log.err
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc       643 Oct 13 16:29 IqANDmr6oR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmR0RMDmF9zsKo.diag
[2025-10-13 16:29:42] -rw-r--r--. 1 boinc boinc     20819 Oct 13 16:29 stderr.txt
[2025-10-13 16:29:42] HITS file was successfully produced:
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc 191751491 Oct 13 16:27 shared/HITS.pool.root.1
[2025-10-13 16:29:42]  *** Contents of shared directory: ***
[2025-10-13 16:29:42] total 405368
[2025-10-13 16:29:42] -rw-r--r--. 2 boinc boinc     15120 Oct 13 14:31 start_atlas.sh
[2025-10-13 16:29:42] -rw-r--r--. 2 boinc boinc    569683 Oct 13 14:31 input.tar.gz
[2025-10-13 16:29:42] -rw-r--r--. 2 boinc boinc 221469314 Oct 13 14:31 ATLAS.root_0
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc 191751491 Oct 13 16:27 HITS.pool.root.1
[2025-10-13 16:29:42] -rw-------. 1 boinc boinc   1280000 Oct 13 16:29 result.tar.gz
16:29:43 (618175): run_atlas exited; CPU time 19234.581615
16:29:43 (618175): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN