Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 17:59:24 (3964): vboxwrapper version 26210
2025-10-12 17:59:24 (3964): BOINC client version: 8.2.4
2025-10-12 17:59:24 (3964): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-12 17:59:24 (3964): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 17:59:25 (3964): Create VM. (boinc_c05bece73600386f, slot#1)
2025-10-12 17:59:25 (3964): Setting Memory Size for VM. (4400MB)
2025-10-12 17:59:26 (3964): Setting CPU Count for VM. (4)
2025-10-12 17:59:26 (3964): Setting Chipset Options for VM.
2025-10-12 17:59:26 (3964): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 17:59:26 (3964): Setting Boot Options for VM.
2025-10-12 17:59:27 (3964): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 17:59:27 (3964): Enabling VM Network Access.
2025-10-12 17:59:27 (3964): Disabling USB Support for VM.
2025-10-12 17:59:28 (3964): Disabling COM Port Support for VM.
2025-10-12 17:59:28 (3964): Disabling LPT Port Support for VM.
2025-10-12 17:59:28 (3964): Disabling Audio Support for VM.
2025-10-12 17:59:28 (3964): Disabling Clipboard Support for VM.
2025-10-12 17:59:29 (3964): Disabling Drag and Drop Support for VM.
2025-10-12 17:59:29 (3964): Adding storage controller(s) to VM.
2025-10-12 17:59:29 (3964): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 17:59:30 (3964): Adding VirtualBox Guest Additions to VM.
2025-10-12 17:59:30 (3964): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 17:59:30 (3964): forwarding host port 1181 to guest port 80
2025-10-12 17:59:31 (3964): Enabling remote desktop for VM.
2025-10-12 17:59:31 (3964): Enabling shared directory for VM.
2025-10-12 17:59:32 (3964): Starting VM using VBoxManage interface. (boinc_c05bece73600386f, slot#1)
2025-10-12 17:59:41 (3964): Successfully started VM. (PID = '14332')
2025-10-12 17:59:41 (3964): Reporting VM Process ID to BOINC.
2025-10-12 17:59:41 (3964): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-12 17:59:41 (3964): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 17:59:41 (3964): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 17:59:41 (3964): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 17:59:41 (3964): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 17:59:41 (3964): Detected: Web Application Enabled (http://localhost:1181)
2025-10-12 17:59:41 (3964): Detected: Remote Desktop Enabled (localhost:1182)
2025-10-12 17:59:41 (3964): Preference change detected
2025-10-12 17:59:41 (3964): Setting CPU throttle for VM. (100%)
2025-10-12 17:59:41 (3964): Setting checkpoint interval to 999 seconds. (Higher value of (Preference: 999 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 17:59:43 (3964): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 17:59:43 (3964): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 17:59:46 (3964): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 17:59:46 (3964): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 17:59:46 (3964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 17:59:54 (3964): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 17:59:54 (3964): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 18:00:05 (3964): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 18:00:05 (3964): Guest Log: 00:00:00.000294 main     Log opened 2025-10-12T18:00:02.128007000Z
2025-10-12 18:00:05 (3964): Guest Log: 00:00:00.000482 main     OS Product: Linux
2025-10-12 18:00:05 (3964): Guest Log: 00:00:00.000551 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 18:00:05 (3964): Guest Log: 00:00:00.000612 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 18:00:05 (3964): Guest Log: 00:00:00.000673 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 18:00:05 (3964): Guest Log: 00:00:00.000675 main     Process ID: 1317
2025-10-12 18:00:05 (3964): Guest Log: 00:00:00.000676 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 18:00:05 (3964): Guest Log: 00:00:00.003251 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 18:00:05 (3964): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 18:00:05 (3964): Guest Log: [INFO] Mounting shared directory
2025-10-12 18:00:05 (3964): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 18:00:11 (3964): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 18:00:11 (3964): Guest Log: [INFO] Detected branch: prod
2025-10-12 18:00:11 (3964): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 18:00:11 (3964): Guest Log: Copying input files
2025-10-12 18:00:13 (3964): Guest Log: Copied input files into RunAtlas.
2025-10-12 18:00:13 (3964): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-12 18:00:13 (3964): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-12 18:00:13 (3964): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-12 18:00:13 (3964): Guest Log: Further information can be found at the LHC@home message board.
2025-10-12 18:00:15 (3964): Guest Log: 00:00:10.010045 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 963 319 000ns (GuestNow=1 760 284 814 174 195 000 ns GuestLast=1 760 292 002 137 514 000 ns fSetTimeLastLoop=true )
2025-10-12 18:00:25 (3964): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 18:00:25 (3964): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 18:00:25 (3964): Guest Log: 2.6.3.0 1599 0 30120 151625 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-12 18:00:26 (3964): Guest Log: copied the webapp to /var/www
2025-10-12 18:00:26 (3964): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-12 18:00:26 (3964): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-12 18:00:27 (3964): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 18:00:27 (3964): Guest Log:  *** Starting ATLAS job. (PandaID=6838633003 taskID=46676269) ***
2025-10-12 19:45:26 (3964): Status Report: Elapsed Time: '6000.452250'
2025-10-12 19:45:26 (3964): Status Report: CPU Time: '19048.437500'
2025-10-12 21:37:10 (3964): Status Report: Elapsed Time: '12001.414827'
2025-10-12 21:37:10 (3964): Status Report: CPU Time: '44753.328125'
2025-10-12 23:18:59 (3964): Status Report: Elapsed Time: '18002.228859'
2025-10-12 23:18:59 (3964): Status Report: CPU Time: '68764.078125'
2025-10-13 01:00:20 (3964): Status Report: Elapsed Time: '24002.228859'
2025-10-13 01:00:20 (3964): Status Report: CPU Time: '92751.656250'
2025-10-13 01:24:12 (3964): Guest Log:  *** Job finished ***
2025-10-13 01:24:12 (3964): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:23:35,006 | INFO     | job.realtimelogging is not enabled
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:23:36,008 | INFO     | [payload] run_realtimelog thread has finished
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:02,210 | INFO     | [monitor] cgroup control has ended
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:03,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140252489168704)>', '<ExcThread(monitor, started 140252047976192)>']
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:04,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:04,413 | INFO     | [monitor] control thread has ended
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:08,468 | INFO     | all workflow threads have been joined
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:08,468 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:08,468 | INFO     | traces error code: 0
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:08,469 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:09,989 [wrapper] ==== pilot stdout END ====
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:09,996 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:10,001 [wrapper] pilotpid: 6022
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:10,006 [wrapper] Pilot exit status: 0
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:10,172 [wrapper] pandaids: 6838633003
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:10,221 [wrapper] cleanup supervisor_pilot 30943 6023
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:10,232 [wrapper] Test setup, not cleaning
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:10,240 [wrapper] apfmon messages muted
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:10,246 [wrapper] ==== wrapper stdout END ====
2025-10-13 01:24:12 (3964): Guest Log: 2025-10-12 23:24:10,251 [wrapper] ==== wrapper stderr END ====
2025-10-13 01:24:12 (3964): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 01:24:12 (3964): Guest Log:     "exeErrorCode": 0,
2025-10-13 01:24:12 (3964): Guest Log:     "exeErrorDiag": "",
2025-10-13 01:24:12 (3964): Guest Log:     "pilotErrorCode": 0,
2025-10-13 01:24:12 (3964): Guest Log:     "pilotErrorDiag": "",
2025-10-13 01:24:12 (3964): Guest Log:  *** Listing of results directory ***
2025-10-13 01:24:12 (3964): Guest Log: total 206880
2025-10-13 01:24:12 (3964): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 11 16:20 pilot3.tar.gz
2025-10-13 01:24:12 (3964): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 11 16:39 runpilot2-wrapper.sh
2025-10-13 01:24:12 (3964): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 11 16:39 queuedata.json
2025-10-13 01:24:12 (3964): Guest Log: -rwxr-xr-x. 1 atlas atlas      8701 Oct 12 16:00 init_data.xml
2025-10-13 01:24:12 (3964): Guest Log: -rwxr-xr-x. 1 atlas atlas    569676 Oct 12 16:00 input.tar.gz
2025-10-13 01:24:12 (3964): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 12 16:00 start_atlas.sh
2025-10-13 01:24:12 (3964): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 16:00 EVNT.46676267._002458.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 01:24:12 (3964): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 12 16:00 pandaJob.out
2025-10-13 01:24:12 (3964): Guest Log: -rw-------. 1 atlas atlas    975528 Oct 12 16:04 agis_schedconf.cvmfs.json
2025-10-13 01:24:12 (3964): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 16:04 pilot3
2025-10-13 01:24:12 (3964): Guest Log: -rw-------. 1 atlas atlas 200023153 Oct 12 23:22 HITS.46676269._061212.pool.root.1
2025-10-13 01:24:12 (3964): Guest Log: -rw-------. 1 atlas atlas      1030 Oct 12 23:23 memory_monitor_summary.json
2025-10-13 01:24:12 (3964): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 23:23 agis_ddmendpoints.agis.ALL.json
2025-10-13 01:24:12 (3964): Guest Log: -rw-------. 1 atlas atlas    557269 Oct 12 23:23 log.46676269._061212.job.log.tgz.1
2025-10-13 01:24:12 (3964): Guest Log: -rw-------. 1 atlas atlas        95 Oct 12 23:23 pilot_heartbeat.json
2025-10-13 01:24:12 (3964): Guest Log: -rw-------. 1 atlas atlas      7822 Oct 12 23:23 heartbeat.json
2025-10-13 01:24:12 (3964): Guest Log: -rw-------. 1 atlas atlas      4684 Oct 12 23:24 pilotlog.txt
2025-10-13 01:24:12 (3964): Guest Log: -rw-------. 1 atlas atlas   3434487 Oct 12 23:24 log.46676269._061212.job.log.1
2025-10-13 01:24:12 (3964): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 23:24 output.list
2025-10-13 01:24:12 (3964): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 23:24 runtime_log
2025-10-13 01:24:12 (3964): Guest Log: -rw-------. 1 atlas atlas   4014080 Oct 12 23:24 result.tar.gz
2025-10-13 01:24:12 (3964): Guest Log: -rw-r--r--. 1 atlas atlas      8649 Oct 12 23:24 runtime_log.err
2025-10-13 01:24:12 (3964): Guest Log: -rw-------. 1 atlas atlas       661 Oct 12 23:24 2JDLDmqnrR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlFSMDms1dX0n.diag
2025-10-13 01:24:12 (3964): Guest Log: Looking for outputfile HITS.46676269._061212.pool.root.1
2025-10-13 01:24:12 (3964): Guest Log: HITS file was successfully produced
2025-10-13 01:24:12 (3964): Guest Log: -rw-------. 1 atlas atlas 200023153 Oct 12 23:22 /home/atlas/RunAtlas/HITS.46676269._061212.pool.root.1
2025-10-13 01:24:13 (3964): Guest Log: Successfully finished the ATLAS job!
2025-10-13 01:24:13 (3964): Guest Log: Copying the results back to the shared directory!
2025-10-13 01:24:14 (3964): Guest Log:  *** Contents of shared directory: ***
2025-10-13 01:24:14 (3964): Guest Log: total 418944
2025-10-13 01:24:14 (3964): Guest Log: -rwxrwxrwx. 1 root root 224354937 Oct 12 15:59 ATLAS.root_0
2025-10-13 01:24:14 (3964): Guest Log: -rwxrwxrwx. 1 root root 200023153 Oct 12 23:24 HITS.pool.root.1
2025-10-13 01:24:14 (3964): Guest Log: -rwxrwxrwx. 1 root root      8701 Oct 12 15:59 init_data.xml
2025-10-13 01:24:14 (3964): Guest Log: -rwxrwxrwx. 1 root root    569676 Oct 11 18:50 input.tar.gz
2025-10-13 01:24:14 (3964): Guest Log: -rwxrwxrwx. 1 root root   4014080 Oct 12 23:24 result.tar.gz
2025-10-13 01:24:14 (3964): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 11 18:50 start_atlas.sh
2025-10-13 01:24:14 (3964): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 01:24:14 (3964): VM Completion File Detected.
2025-10-13 01:24:14 (3964): Powering off VM.
2025-10-13 01:24:15 (3964): Successfully stopped VM.
2025-10-13 01:24:15 (3964): Deregistering VM. (boinc_c05bece73600386f, slot#1)
2025-10-13 01:24:15 (3964): Removing network bandwidth throttle group from VM.
2025-10-13 01:24:16 (3964): Removing VM from VirtualBox.
2025-10-13 01:24:21 (3964): called boinc_finish(0)

</stderr_txt>
]]>

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