Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:03:08 (3197158): wrapper (7.7.26015): starting
07:03:08 (3197158): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 07:03:08] Arguments: --nthreads 4
[2025-10-12 07:03:08] Threads: 4
[2025-10-12 07:03:08] Checking for CVMFS
[2025-10-12 07:03:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:03:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:03:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:03:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:03:09] 2.13.2.0 2713010 939 49504 151611 0 57 2722328 4194305 922 130560 0 1293825 99.994 29556 70 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-10-12 07:03:09] CVMFS is ok
[2025-10-12 07:03:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:03:09] Checking for apptainer binary...
[2025-10-12 07:03:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:03:09] Running /usr/bin/apptainer --version
[2025-10-12 07:03:09] apptainer version 1.3.4
[2025-10-12 07:03:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:03:09] rubble
[2025-10-12 07:03:09] apptainer works
[2025-10-12 07:03:09] Set ATHENA_PROC_NUMBER=4
[2025-10-12 07:03:09] Set ATHENA_CORE_NUMBER=4
[2025-10-12 07:03:09] Starting ATLAS job with PandaID=6837706942
[2025-10-12 07:03:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:49:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:49:38] 2025-10-12 08:48:39,358 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:49:38] 2025-10-12 08:48:39,358 | INFO     | sum of square deviations: 348769330.0
[2025-10-12 08:49:38] 2025-10-12 08:48:39,358 | INFO     | sum of deviations: 1415544375.500002
[2025-10-12 08:49:38] 2025-10-12 08:48:39,358 | INFO     | mean x: 1760255763.5
[2025-10-12 08:49:38] 2025-10-12 08:48:39,358 | INFO     | mean y: 2293759.951923077
[2025-10-12 08:49:38] 2025-10-12 08:48:39,358 | INFO     | -- intersect: -7142027518.137198
[2025-10-12 08:49:38] 2025-10-12 08:48:39,358 | INFO     | intersect: -7142027518.137198
[2025-10-12 08:49:38] 2025-10-12 08:48:39,359 | INFO     | chi2: 2.3638486708680206
[2025-10-12 08:49:38] 2025-10-12 08:48:39,359 | INFO     | sum of square deviations: 300842850.0
[2025-10-12 08:49:38] 2025-10-12 08:48:39,359 | INFO     | sum of deviations: 7094173180.999999
[2025-10-12 08:49:38] 2025-10-12 08:48:39,359 | INFO     | mean x: 1760255611.0
[2025-10-12 08:49:38] 2025-10-12 08:48:39,359 | INFO     | mean y: 2311100.222222222
[2025-10-12 08:49:38] 2025-10-12 08:48:39,359 | INFO     | -- intersect: -41506264381.166046
[2025-10-12 08:49:38] 2025-10-12 08:48:39,359 | INFO     | intersect: -41506264381.166046
[2025-10-12 08:49:38] 2025-10-12 08:48:39,359 | INFO     | chi2: 1.7229762389658119
[2025-10-12 08:49:38] 2025-10-12 08:48:39,359 | INFO     | current chi2=1.7229762389658119 (change=27.111398449498726 %)
[2025-10-12 08:49:38] 2025-10-12 08:48:39,359 | INFO     | sum of square deviations: 257521107.5
[2025-10-12 08:49:38] 2025-10-12 08:48:39,359 | INFO     | sum of deviations: 6765651428.5
[2025-10-12 08:49:38] 2025-10-12 08:48:39,359 | INFO     | mean x: 1760255458.5
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | mean y: 2309942.776595745
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | -- intersect: -46243510343.33509
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | intersect: -46243510343.33509
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | chi2: 1.7277559534755689
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | current chi2=1.7277559534755689 (change=-0.2774103555035645 %)
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | right removable region: 93
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | sum of square deviations: 300842850.0
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | sum of deviations: -12592754966.0
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | mean x: 1760255916.0
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | mean y: 2337202.8282828284
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | -- intersect: 73683567877.38104
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | intersect: 73683567877.38104
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | chi2: 0.8211935367875125
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | current chi2=0.8211935367875125 (change=65.26031691842758 %)
[2025-10-12 08:49:38] 2025-10-12 08:48:39,360 | INFO     | sum of square deviations: 257521107.5
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | sum of deviations: -7016638338.000001
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | mean x: 1760256068.5
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | mean y: 2317534.510638298
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | -- intersect: 47963746152.2959
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | intersect: 47963746152.2959
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | chi2: 0.743074458304605
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | current chi2=0.743074458304605 (change=9.512870594245948 %)
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | left removable region: 20
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | sum of square deviations: 120605052.0
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | sum of deviations: 141673659.00000006
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | mean x: 1760256038.0
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | mean y: 2331123.5616438356
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | -- intersect: -2065425653.9927752
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | intersect: -2065425653.9927752
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | chi2: 0.0011106969007801614
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | -- intersect: -2065425653.9927752
[2025-10-12 08:49:38] 2025-10-12 08:48:39,361 | INFO     | current memory leak: 1.17 B/s (using 73 data points, chi2=0.00)
[2025-10-12 08:49:38] 2025-10-12 08:48:39,362 | INFO     | could have reported an average CPU frequency of 3995 MHz (7 samples)
[2025-10-12 08:49:38] 2025-10-12 08:48:39,362 | INFO     | ..............................
[2025-10-12 08:49:38] 2025-10-12 08:48:39,362 | INFO     | . Timing measurements:
[2025-10-12 08:49:38] 2025-10-12 08:48:39,362 | INFO     | . get job = 0 s
[2025-10-12 08:49:38] 2025-10-12 08:48:39,362 | INFO     | . initial setup = 6 s
[2025-10-12 08:49:38] 2025-10-12 08:48:39,362 | INFO     | . payload setup = 3 s
[2025-10-12 08:49:38] 2025-10-12 08:48:39,362 | INFO     | . stage-in = 0 s
[2025-10-12 08:49:38] 2025-10-12 08:48:39,362 | INFO     | . payload execution = 6289 s
[2025-10-12 08:49:38] 2025-10-12 08:48:39,362 | INFO     | . stage-out = 0 s
[2025-10-12 08:49:38] 2025-10-12 08:48:39,362 | INFO     | . log creation = 0 s
[2025-10-12 08:49:38] 2025-10-12 08:48:39,362 | INFO     | ..............................
[2025-10-12 08:49:38] 2025-10-12 08:48:39,405 | INFO     | 
[2025-10-12 08:49:38] 2025-10-12 08:48:39,405 | INFO     | job summary report
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | --------------------------------------------------
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | PanDA job id: 6837706942
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | task id: 46676269
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | errors: (none)
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | pilot state: finished 
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | transexitcode: 0
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | exeerrorcode: 0
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | exeerrordiag: 
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | exitcode: 0
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | exitmsg: OK
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | cpuconsumptiontime: 23824 s
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | nevents: 400
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | neventsw: 0
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | pid: 3207309
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | pgrp: 3207309
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | corecount: 4
[2025-10-12 08:49:38] 2025-10-12 08:48:39,406 | INFO     | event service: False
[2025-10-12 08:49:38] 2025-10-12 08:48:39,407 | INFO     | sizes: {0: 2348864, 3: 2349126, 11: 2349154, 6296: 2376278, 6297: 2385346, 6304: 2385484}
[2025-10-12 08:49:38] 2025-10-12 08:48:39,407 | INFO     | --------------------------------------------------
[2025-10-12 08:49:38] 2025-10-12 08:48:39,407 | INFO     | 
[2025-10-12 08:49:38] 2025-10-12 08:48:39,407 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-12 08:49:38] 2025-10-12 08:48:39,429 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,429 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,429 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,429 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,429 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,429 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,429 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,429 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,429 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,429 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,430 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,430 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,430 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,430 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:49:38] 2025-10-12 08:48:39,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,430 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:49:38] 2025-10-12 08:48:39,430 | INFO     | job 6837706942 has completed (purged errors)
[2025-10-12 08:49:38] 2025-10-12 08:48:39,430 | INFO     | overall cleanup function is called
[2025-10-12 08:49:38] 2025-10-12 08:48:40,437 | INFO     | --- collectZombieJob: --- 10, [3207309]
[2025-10-12 08:49:38] 2025-10-12 08:48:40,438 | INFO     | zombie collector waiting for pid 3207309
[2025-10-12 08:49:38] 2025-10-12 08:48:40,438 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:49:38] 2025-10-12 08:48:40,438 | INFO     | collected zombie processes
[2025-10-12 08:49:38] 2025-10-12 08:48:40,438 | INFO     | will attempt to kill all subprocesses of pid=3207309
[2025-10-12 08:49:38] 2025-10-12 08:48:40,496 | INFO     | process IDs to be killed: [3207309] (in reverse order)
[2025-10-12 08:49:38] 2025-10-12 08:48:40,529 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:49:38] 2025-10-12 08:48:40,529 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:49:38] 2025-10-12 08:48:40,531 | INFO     | did not find any defunct processes belonging to 3207309
[2025-10-12 08:49:38] 2025-10-12 08:48:40,532 | INFO     | did not find any defunct processes belonging to 3207309
[2025-10-12 08:49:38] 2025-10-12 08:48:40,532 | INFO     | ready for new job
[2025-10-12 08:49:38] 2025-10-12 08:48:40,532 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:49:38] 2025-10-12 08:48:40,533 | INFO     | ***************************************
[2025-10-12 08:49:38] 2025-10-12 08:48:40,533 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:49:38] 2025-10-12 08:48:40,533 | INFO     | ***************************************
[2025-10-12 08:49:38] 2025-10-12 08:48:40,533 | INFO     | 
[2025-10-12 08:49:38] 2025-10-12 08:48:40,533 | INFO     | architecture information:
[2025-10-12 08:49:38] 2025-10-12 08:48:40,533 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:49:38] 2025-10-12 08:48:40,546 | INFO     | cat /etc/os-release:
[2025-10-12 08:49:38] NAME="CentOS Linux"
[2025-10-12 08:49:38] VERSION="7 (Core)"
[2025-10-12 08:49:38] ID="centos"
[2025-10-12 08:49:38] ID_LIKE="rhel fedora"
[2025-10-12 08:49:38] VERSION_ID="7"
[2025-10-12 08:49:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:49:38] ANSI_COLOR="0;31"
[2025-10-12 08:49:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:49:38] HOME_URL="https://www.centos.org/"
[2025-10-12 08:49:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:49:38] 
[2025-10-12 08:49:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:49:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:49:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:49:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:49:38] 
[2025-10-12 08:49:38] 2025-10-12 08:48:40,546 | INFO     | ***************************************
[2025-10-12 08:49:38] 2025-10-12 08:48:41,048 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-12 08:49:38] 2025-10-12 08:48:41,065 | INFO     | sufficient remaining disk space (260251320320 B)
[2025-10-12 08:49:38] 2025-10-12 08:48:41,066 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:49:38] 2025-10-12 08:48:41,066 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:49:38] 2025-10-12 08:48:41,066 | INFO     | update_server=False
[2025-10-12 08:49:38] 2025-10-12 08:48:41,066 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:49:38] 2025-10-12 08:48:41,066 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:49:38] 2025-10-12 08:48:41,066 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:49:38] 2025-10-12 08:48:41,252 | INFO     | all data control threads have been joined
[2025-10-12 08:49:38] 2025-10-12 08:48:41,408 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 08:49:38] 2025-10-12 08:48:41,408 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 08:49:38] 2025-10-12 08:48:41,408 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:49:38] 2025-10-12 08:48:41,409 | INFO     | will abort loop
[2025-10-12 08:49:38] 2025-10-12 08:48:41,749 | INFO     | all job control threads have been joined
[2025-10-12 08:49:38] 2025-10-12 08:48:42,070 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:42,071 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:42,252 | INFO     | all payload control threads have been joined
[2025-10-12 08:49:38] 2025-10-12 08:48:42,257 | INFO     | [data] control thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:42,282 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:42,414 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:42,647 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:42,755 | INFO     | [job] control thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:42,811 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:49:38] 2025-10-12 08:48:43,072 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:43,129 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:43,214 | INFO     | [job] validate thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:43,227 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:43,258 | INFO     | [payload] control thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:43,317 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:43,462 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:46,812 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:48:51,272 | INFO     | job.realtimelogging is not enabled
[2025-10-12 08:49:38] 2025-10-12 08:48:52,277 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:49:38] 2025-10-12 08:49:10,822 | INFO     | PID=3200880 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:49:38] 2025-10-12 08:49:10,822 | INFO     | .. there are 2 such processes running
[2025-10-12 08:49:38] 2025-10-12 08:49:10,822 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:49:38] 2025-10-12 08:49:10,822 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:49:38] 2025-10-12 08:49:10,822 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:49:38] 2025-10-12 08:49:31,487 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:49:38] 2025-10-12 08:49:33,275 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128475894576960)>', '<ExcThread(monitor, started 128475390260992)>']
[2025-10-12 08:49:38] 2025-10-12 08:49:33,938 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:49:38] 2025-10-12 08:49:33,938 | INFO     | [monitor] control thread has ended
[2025-10-12 08:49:38] 2025-10-12 08:49:38,300 | INFO     | all workflow threads have been joined
[2025-10-12 08:49:38] 2025-10-12 08:49:38,300 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:49:38] 2025-10-12 08:49:38,300 | INFO     | traces error code: 0
[2025-10-12 08:49:38] 2025-10-12 08:49:38,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:49:38] 2025-10-12 08:49:38,385 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:49:38] 2025-10-12 08:49:38,387 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:49:38] 2025-10-12 08:49:38,389 [wrapper] pilotpid: 3200880
[2025-10-12 08:49:38] 2025-10-12 08:49:38,391 [wrapper] Pilot exit status: 0
[2025-10-12 08:49:38] 2025-10-12 08:49:38,400 [wrapper] pandaids: 6837706942
[2025-10-12 08:49:38] 2025-10-12 08:49:38,422 [wrapper] cleanup supervisor_pilot 3249408 3200881
[2025-10-12 08:49:38] 2025-10-12 08:49:38,424 [wrapper] Test setup, not cleaning
[2025-10-12 08:49:38] 2025-10-12 08:49:38,428 [wrapper] apfmon messages muted
[2025-10-12 08:49:38] 2025-10-12 08:49:38,430 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:49:38] 2025-10-12 08:49:38,432 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:49:38]  *** Error codes and diagnostics ***
[2025-10-12 08:49:38]     "exeErrorCode": 0,
[2025-10-12 08:49:38]     "exeErrorDiag": "",
[2025-10-12 08:49:38]     "pilotErrorCode": 0,
[2025-10-12 08:49:38]     "pilotErrorDiag": "",
[2025-10-12 08:49:38]  *** Listing of results directory ***
[2025-10-12 08:49:38] total 411356
[2025-10-12 08:49:38] -rw-r--r-- 1 boinc boinc    557409 Oct 10 18:18 pilot3.tar.gz
[2025-10-12 08:49:38] -rw-r--r-- 1 boinc boinc      5112 Oct 10 18:20 queuedata.json
[2025-10-12 08:49:38] -rwx------ 1 boinc boinc     36292 Oct 10 18:22 runpilot2-wrapper.sh
[2025-10-12 08:49:38] -rw-r--r-- 1 boinc boinc       100 Oct 12 07:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:49:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 07:03 run_atlas
[2025-10-12 08:49:38] -rw-r--r-- 1 boinc boinc       105 Oct 12 07:03 job.xml
[2025-10-12 08:49:38] -rw-r--r-- 2 boinc boinc 220223863 Oct 12 07:03 EVNT.46676267._001749.pool.root.1
[2025-10-12 08:49:38] -rw-r--r-- 1 boinc boinc      9731 Oct 12 07:03 init_data.xml
[2025-10-12 08:49:38] drwxrwx--x 2 boinc boinc      4096 Oct 12 07:03 shared
[2025-10-12 08:49:38] -rw-r--r-- 2 boinc boinc    569679 Oct 12 07:03 input.tar.gz
[2025-10-12 08:49:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 07:03 start_atlas.sh
[2025-10-12 08:49:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 07:03 boinc_lockfile
[2025-10-12 08:49:38] -rw-r--r-- 1 boinc boinc      2550 Oct 12 07:03 pandaJob.out
[2025-10-12 08:49:38] -rw------- 1 boinc boinc    975528 Oct 12 07:03 agis_schedconf.cvmfs.json
[2025-10-12 08:49:38] -rw------- 1 boinc boinc   1560580 Oct 12 07:03 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:49:38] drwx------ 5 boinc boinc      4096 Oct 12 07:03 pilot3
[2025-10-12 08:49:38] -rw------- 1 boinc boinc 194692552 Oct 12 08:48 HITS.46676269._043207.pool.root.1
[2025-10-12 08:49:38] -rw-r--r-- 1 boinc boinc       529 Oct 12 08:48 boinc_task_state.xml
[2025-10-12 08:49:38] -rw------- 1 boinc boinc      1014 Oct 12 08:48 memory_monitor_summary.json
[2025-10-12 08:49:38] -rw------- 1 boinc boinc    297672 Oct 12 08:48 log.46676269._043207.job.log.tgz.1
[2025-10-12 08:49:38] -rw------- 1 boinc boinc        95 Oct 12 08:48 pilot_heartbeat.json
[2025-10-12 08:49:38] -rw------- 1 boinc boinc      7721 Oct 12 08:48 heartbeat.json
[2025-10-12 08:49:38] -rw-r--r-- 1 boinc boinc        27 Oct 12 08:49 wrapper_checkpoint.txt
[2025-10-12 08:49:38] -rw-r--r-- 1 boinc boinc      8192 Oct 12 08:49 boinc_mmap_file
[2025-10-12 08:49:38] -rw------- 1 boinc boinc      5089 Oct 12 08:49 pilotlog.txt
[2025-10-12 08:49:38] -rw------- 1 boinc boinc    905192 Oct 12 08:49 log.46676269._043207.job.log.1
[2025-10-12 08:49:38] -rw------- 1 boinc boinc       357 Oct 12 08:49 output.list
[2025-10-12 08:49:38] -rw-r--r-- 1 boinc boinc       620 Oct 12 08:49 runtime_log
[2025-10-12 08:49:38] -rw------- 1 boinc boinc   1218560 Oct 12 08:49 result.tar.gz
[2025-10-12 08:49:38] -rw-r--r-- 1 boinc boinc      8756 Oct 12 08:49 runtime_log.err
[2025-10-12 08:49:38] -rw------- 1 boinc boinc       643 Oct 12 08:49 B8yLDmpvWR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmeOQMDm8Z5qhn.diag
[2025-10-12 08:49:38] -rw-r--r-- 1 boinc boinc     20584 Oct 12 08:49 stderr.txt
[2025-10-12 08:49:38] HITS file was successfully produced:
[2025-10-12 08:49:38] -rw------- 1 boinc boinc 194692552 Oct 12 08:48 shared/HITS.pool.root.1
[2025-10-12 08:49:38]  *** Contents of shared directory: ***
[2025-10-12 08:49:38] total 406972
[2025-10-12 08:49:38] -rw-r--r-- 2 boinc boinc 220223863 Oct 12 07:03 ATLAS.root_0
[2025-10-12 08:49:38] -rw-r--r-- 2 boinc boinc    569679 Oct 12 07:03 input.tar.gz
[2025-10-12 08:49:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 07:03 start_atlas.sh
[2025-10-12 08:49:38] -rw------- 1 boinc boinc 194692552 Oct 12 08:48 HITS.pool.root.1
[2025-10-12 08:49:38] -rw------- 1 boinc boinc   1218560 Oct 12 08:49 result.tar.gz
08:49:40 (3197158): run_atlas exited; CPU time 23837.900147
08:49:40 (3197158): called boinc_finish(0)

</stderr_txt>
]]>

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