Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:51:10 (1686654): wrapper (7.7.26015): starting
21:51:10 (1686654): wrapper: running run_atlas (--nthreads 2)
[2025-10-11 21:51:10] Arguments: --nthreads 2
[2025-10-11 21:51:10] Threads: 2
[2025-10-11 21:51:10] Checking for CVMFS
[2025-10-11 21:51:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:51:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:51:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:51:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:51:13] 2.11.0.0 1657395 9 38140 151594 2 186 2223245 4194304 0 130560 0 91123 99.998 1360 924 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 21:51:13] CVMFS is ok
[2025-10-11 21:51:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:51:13] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 21:51:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 21:51:13] Further information can be found at the LHC@home message board.
[2025-10-11 21:51:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:51:13] Checking for apptainer binary...
[2025-10-11 21:51:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:51:13] Running /usr/bin/apptainer --version
[2025-10-11 21:51:15] apptainer version 1.2.2-1.el8
[2025-10-11 21:51:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:51:21] bottom
[2025-10-11 21:51:21] apptainer works
[2025-10-11 21:51:21] Set ATHENA_PROC_NUMBER=2
[2025-10-11 21:51:21] Set ATHENA_CORE_NUMBER=2
[2025-10-11 21:51:21] Starting ATLAS job with PandaID=6838452444
[2025-10-11 21:51:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:59:51]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:59:51] 2025-10-11 19:59:18,217 | WARNING  | file does not exist either: /var/lib/boinc/slots/5/PanDA_Pilot-6838452444/memory_monitor_output.txt
[2025-10-11 21:59:51] 2025-10-11 19:59:18,217 | INFO     | memory summary dictionary not yet available
[2025-10-11 21:59:51] 2025-10-11 19:59:18,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:59:51] 2025-10-11 19:59:18,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:59:51] 2025-10-11 19:59:18,218 | INFO     | could have reported an average CPU frequency of 1891 MHz (4 samples)
[2025-10-11 21:59:51] 2025-10-11 19:59:18,218 | INFO     | ..............................
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . Timing measurements:
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . get job = 0 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . initial setup = 4 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . payload setup = 14 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . stage-in = 0 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . payload execution = 231 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . stage-out = 0 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,220 | INFO     | . log creation = 0 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,220 | INFO     | ..............................
[2025-10-11 21:59:51] 2025-10-11 19:59:18,220 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 21:59:51] 2025-10-11 19:59:18,220 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/5/PanDA_Pilot-6838452444/pilotlog.txt
[2025-10-11 21:59:51] 2025-10-11 19:59:18,240 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 21:59:51] - Log from pilotlog.txt -
[2025-10-11 21:59:51] 2025-10-11 19:59:17,424 | INFO     | time since job start (456s) is within the limit (172800.0s)
[2025-10-11 21:59:51] 2025-10-11 19:59:18,214 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-11 21:59:51] 2025-10-11 19:59:18,216 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.2675
[2025-10-11 21:59:51] 2025-10-11 19:59:18,217 | WARNING  | file does not exist either: /var/lib/boinc/slots/5/PanDA_Pilot-6838452444/memory_monitor_output.txt
[2025-10-11 21:59:51] 2025-10-11 19:59:18,217 | INFO     | memory summary dictionary not yet available
[2025-10-11 21:59:51] 2025-10-11 19:59:18,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:59:51] 2025-10-11 19:59:18,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:59:51] 2025-10-11 19:59:18,218 | INFO     | could have reported an average CPU frequency of 1891 MHz (4 samples)
[2025-10-11 21:59:51] 2025-10-11 19:59:18,218 | INFO     | ..............................
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . Timing measurements:
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . get job = 0 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . initial setup = 4 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . payload setup = 14 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . stage-in = 0 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . payload execution = 231 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . stage-out = 0 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,220 | INFO     | . log creation = 0 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,220 | INFO     | ..............................
[2025-10-11 21:59:51] 2025-10-11 19:59:18,220 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 21:59:51] 2025-10-11 19:59:18,220 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/5/PanDA_Pilot-6838452444/pilotlog.txt
[2025-10-11 21:59:51] 2025-10-11 19:59:18,240 | WARNING  | 
[2025-10-11 21:59:51] [begin log extracts]
[2025-10-11 21:59:51] - Log from pilotlog.txt -
[2025-10-11 21:59:51] 2025-10-11 19:59:17,424 | INFO     | time since job start (456s) is within the limit (172800.0s)
[2025-10-11 21:59:51] 2025-10-11 19:59:18,214 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-11 21:59:51] 2025-10-11 19:59:18,216 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.2675
[2025-10-11 21:59:51] 2025-10-11 19:59:18,217 | WARNING  | file does not exist either: /var/lib/boinc/slots/5/PanDA_Pilot-6838452444/memory_monitor_output.txt
[2025-10-11 21:59:51] 2025-10-11 19:59:18,217 | INFO     | memory summary dictionary not yet available
[2025-10-11 21:59:51] 2025-10-11 19:59:18,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:59:51] 2025-10-11 19:59:18,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:59:51] 2025-10-11 19:59:18,218 | INFO     | could have reported an average CPU frequency of 1891 MHz (4 samples)
[2025-10-11 21:59:51] 2025-10-11 19:59:18,218 | INFO     | ..............................
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . Timing measurements:
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . get job = 0 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . initial setup = 4 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . payload setup = 14 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . stage-in = 0 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . payload execution = 231 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,219 | INFO     | . stage-out = 0 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,220 | INFO     | . log creation = 0 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,220 | INFO     | ..............................
[2025-10-11 21:59:51] 2025-10-11 19:59:18,220 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 21:59:51] 2025-10-11 19:59:18,220 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/5/PanDA_Pilot-6838452444/pilotlog.txt
[2025-10-11 21:59:51] [end log extracts]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,241 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 21:59:51] 2025-10-11 19:59:18,242 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-10-11 21:59:51] 2025-10-11 19:59:18,361 | INFO     | 
[2025-10-11 21:59:51] 2025-10-11 19:59:18,361 | INFO     | job summary report
[2025-10-11 21:59:51] 2025-10-11 19:59:18,361 | INFO     | --------------------------------------------------
[2025-10-11 21:59:51] 2025-10-11 19:59:18,361 | INFO     | PanDA job id: 6838452444
[2025-10-11 21:59:51] 2025-10-11 19:59:18,361 | INFO     | task id: 46676269
[2025-10-11 21:59:51] 2025-10-11 19:59:18,362 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 21:56:00,400 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 21:59:51] 2025-10-11 19:59:18,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:59:51] 2025-10-11 19:59:18,362 | INFO     | pilot state: failed 
[2025-10-11 21:59:51] 2025-10-11 19:59:18,362 | INFO     | transexitcode: 65
[2025-10-11 21:59:51] 2025-10-11 19:59:18,362 | INFO     | exeerrorcode: 65
[2025-10-11 21:59:51] 2025-10-11 19:59:18,362 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-11 21:59:51] 2025-10-11 19:59:18,362 | INFO     | exitcode: 65
[2025-10-11 21:59:51] 2025-10-11 19:59:18,362 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-11 21:59:51] 2025-10-11 19:59:18,363 | INFO     | cpuconsumptiontime: 152 s
[2025-10-11 21:59:51] 2025-10-11 19:59:18,363 | INFO     | nevents: 0
[2025-10-11 21:59:51] 2025-10-11 19:59:18,363 | INFO     | neventsw: 0
[2025-10-11 21:59:51] 2025-10-11 19:59:18,363 | INFO     | pid: 1696786
[2025-10-11 21:59:51] 2025-10-11 19:59:18,363 | INFO     | pgrp: 1696786
[2025-10-11 21:59:51] 2025-10-11 19:59:18,363 | INFO     | corecount: 2
[2025-10-11 21:59:51] 2025-10-11 19:59:18,363 | INFO     | event service: False
[2025-10-11 21:59:51] 2025-10-11 19:59:18,363 | INFO     | sizes: {0: 2348023, 1: 2348879, 2: 2348879, 8: 2349169, 12: 2349197, 310: 2372807, 311: 2377102, 312: 2377158, 439: 2377352}
[2025-10-11 21:59:51] 2025-10-11 19:59:18,364 | INFO     | --------------------------------------------------
[2025-10-11 21:59:51] 2025-10-11 19:59:18,364 | INFO     | 
[2025-10-11 21:59:51] 2025-10-11 19:59:18,364 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-10-11 21:59:51] 2025-10-11 19:59:18,389 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,390 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,390 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,390 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,390 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,390 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,391 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,391 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,391 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,391 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,391 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,392 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,392 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,392 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,392 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,392 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:59:51] 2025-10-11 19:59:18,392 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,392 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:59:51] 2025-10-11 19:59:18,393 | INFO     | job 6838452444 has completed (purged errors)
[2025-10-11 21:59:51] 2025-10-11 19:59:18,393 | INFO     | overall cleanup function is called
[2025-10-11 21:59:51] 2025-10-11 19:59:19,400 | INFO     | --- collectZombieJob: --- 10, [1696786]
[2025-10-11 21:59:51] 2025-10-11 19:59:19,400 | INFO     | zombie collector waiting for pid 1696786
[2025-10-11 21:59:51] 2025-10-11 19:59:19,400 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:59:51] 2025-10-11 19:59:19,401 | INFO     | collected zombie processes
[2025-10-11 21:59:51] 2025-10-11 19:59:19,401 | INFO     | will attempt to kill all subprocesses of pid=1696786
[2025-10-11 21:59:51] 2025-10-11 19:59:19,476 | INFO     | process IDs to be killed: [1696786] (in reverse order)
[2025-10-11 21:59:51] 2025-10-11 19:59:19,525 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:59:51] 2025-10-11 19:59:19,525 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:59:51] 2025-10-11 19:59:19,529 | INFO     | did not find any defunct processes belonging to 1696786
[2025-10-11 21:59:51] 2025-10-11 19:59:19,532 | INFO     | did not find any defunct processes belonging to 1696786
[2025-10-11 21:59:51] 2025-10-11 19:59:19,533 | INFO     | ready for new job
[2025-10-11 21:59:51] 2025-10-11 19:59:19,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:59:51] 2025-10-11 19:59:19,534 | INFO     | ***************************************
[2025-10-11 21:59:51] 2025-10-11 19:59:19,535 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:59:51] 2025-10-11 19:59:19,535 | INFO     | ***************************************
[2025-10-11 21:59:51] 2025-10-11 19:59:19,535 | INFO     | 
[2025-10-11 21:59:51] 2025-10-11 19:59:19,547 | INFO     | architecture information:
[2025-10-11 21:59:51] 2025-10-11 19:59:19,547 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:59:51] 2025-10-11 19:59:19,567 | INFO     | cat /etc/os-release:
[2025-10-11 21:59:51] NAME="CentOS Linux"
[2025-10-11 21:59:51] VERSION="7 (Core)"
[2025-10-11 21:59:51] ID="centos"
[2025-10-11 21:59:51] ID_LIKE="rhel fedora"
[2025-10-11 21:59:51] VERSION_ID="7"
[2025-10-11 21:59:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:59:51] ANSI_COLOR="0;31"
[2025-10-11 21:59:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:59:51] HOME_URL="https://www.centos.org/"
[2025-10-11 21:59:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:59:51] 
[2025-10-11 21:59:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:59:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:59:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:59:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:59:51] 
[2025-10-11 21:59:51] 2025-10-11 19:59:19,567 | INFO     | ***************************************
[2025-10-11 21:59:51] 2025-10-11 19:59:20,069 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-10-11 21:59:51] 2025-10-11 19:59:20,091 | INFO     | sufficient remaining disk space (214764093440 B)
[2025-10-11 21:59:51] 2025-10-11 19:59:20,091 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:59:51] 2025-10-11 19:59:20,092 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:59:51] 2025-10-11 19:59:20,092 | INFO     | update_server=False
[2025-10-11 21:59:51] 2025-10-11 19:59:20,092 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:59:51] 2025-10-11 19:59:20,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:59:51] 2025-10-11 19:59:20,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:59:51] 2025-10-11 19:59:20,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:59:51] 2025-10-11 19:59:20,631 | INFO     | aborting loop
[2025-10-11 21:59:51] 2025-10-11 19:59:20,747 | INFO     | all job control threads have been joined
[2025-10-11 21:59:51] 2025-10-11 19:59:20,837 | INFO     | all data control threads have been joined
[2025-10-11 21:59:51] 2025-10-11 19:59:20,942 | INFO     | all payload control threads have been joined
[2025-10-11 21:59:51] 2025-10-11 19:59:21,097 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:21,097 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:21,470 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:21,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:59:51] 2025-10-11 19:59:21,637 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:21,749 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:21,753 | INFO     | [job] control thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:21,843 | INFO     | [data] control thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:21,921 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:21,921 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:21,948 | INFO     | [payload] control thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:22,215 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:22,385 | INFO     | [job] validate thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:22,569 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:22,570 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:23,503 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:24,098 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:59:51] 2025-10-11 19:59:41,117 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:59:51] 2025-10-11 19:59:41,447 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949051623232)>', '<ExcThread(monitor, started 139948606871296)>']
[2025-10-11 21:59:51] 2025-10-11 19:59:46,471 | INFO     | all workflow threads have been joined
[2025-10-11 21:59:51] 2025-10-11 19:59:46,472 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:59:51] 2025-10-11 19:59:46,472 | INFO     | traces error code: 0
[2025-10-11 21:59:51] 2025-10-11 19:59:46,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:59:51] 2025-10-11 19:59:50,584 | INFO     | PID=1690282 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:59:51] 2025-10-11 19:59:50,586 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:59:51] 2025-10-11 19:59:50,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:59:51] 2025-10-11 19:59:50,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:59:51] 2025-10-11 19:59:50,587 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:59:51] 2025-10-11 19:59:50,587 | CRITICAL | thread 'MainThread' is not alive
[2025-10-11 21:59:51] 2025-10-11 19:59:50,587 | INFO     | [monitor] control thread has ended
[2025-10-11 21:59:51] 2025-10-11 19:59:50,748 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:59:51] 2025-10-11 19:59:50,751 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:59:51] 2025-10-11 19:59:50,755 [wrapper] pilotpid: 1690282
[2025-10-11 21:59:51] 2025-10-11 19:59:50,759 [wrapper] Pilot exit status: 0
[2025-10-11 21:59:51] 2025-10-11 19:59:50,844 [wrapper] pandaids: 6838452444
[2025-10-11 21:59:51] 2025-10-11 19:59:50,870 [wrapper] cleanup supervisor_pilot 1690288 1690283
[2025-10-11 21:59:51] 2025-10-11 19:59:50,875 [wrapper] Test setup, not cleaning
[2025-10-11 21:59:51] 2025-10-11 19:59:50,879 [wrapper] apfmon messages muted
[2025-10-11 21:59:51] 2025-10-11 19:59:50,883 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:59:51] 2025-10-11 19:59:50,886 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:59:51]  *** Error codes and diagnostics ***
[2025-10-11 21:59:51]     "exeErrorCode": 65,
[2025-10-11 21:59:51]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-11 21:59:51]     "pilotErrorCode": 1305,
[2025-10-11 21:59:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-11 21:59:51]  *** Listing of results directory ***
[2025-10-11 21:59:51] total 218648
[2025-10-11 21:59:51] -rw-r--r-- 1 boinc boinc    557409 Oct 11 14:51 pilot3.tar.gz
[2025-10-11 21:59:51] -rw-r--r-- 1 boinc boinc      5112 Oct 11 15:38 queuedata.json
[2025-10-11 21:59:51] -rwx------ 1 boinc boinc     36292 Oct 11 15:38 runpilot2-wrapper.sh
[2025-10-11 21:59:51] -rw-r--r-- 1 boinc boinc       100 Oct 11 21:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:59:51] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 21:51 run_atlas
[2025-10-11 21:59:51] -rw-r--r-- 1 boinc boinc       105 Oct 11 21:51 job.xml
[2025-10-11 21:59:51] -rw-r--r-- 2 boinc boinc 219565661 Oct 11 21:51 EVNT.46676267._002345.pool.root.1
[2025-10-11 21:59:51] -rw-r--r-- 1 boinc boinc      5984 Oct 11 21:51 init_data.xml
[2025-10-11 21:59:51] drwxrwx--x 2 boinc boinc        68 Oct 11 21:51 shared
[2025-10-11 21:59:51] -rw-r--r-- 2 boinc boinc    569680 Oct 11 21:51 input.tar.gz
[2025-10-11 21:59:51] -rw-r--r-- 2 boinc boinc     15120 Oct 11 21:51 start_atlas.sh
[2025-10-11 21:59:51] -rw-r--r-- 1 boinc boinc         0 Oct 11 21:51 boinc_lockfile
[2025-10-11 21:59:51] -rw-r--r-- 1 boinc boinc      2547 Oct 11 21:51 pandaJob.out
[2025-10-11 21:59:51] -rw------- 1 boinc boinc    975512 Oct 11 21:51 agis_schedconf.cvmfs.json
[2025-10-11 21:59:51] -rw------- 1 boinc boinc   1560580 Oct 11 21:51 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:59:51] drwx------ 5 boinc boinc      4096 Oct 11 21:51 pilot3
[2025-10-11 21:59:51] -rw-r--r-- 1 boinc boinc       524 Oct 11 21:56 boinc_task_state.xml
[2025-10-11 21:59:51] -rw------- 1 boinc boinc     49047 Oct 11 21:57 log.46676269._058472.job.log.tgz.1
[2025-10-11 21:59:51] -rw------- 1 boinc boinc      8057 Oct 11 21:59 heartbeat.json
[2025-10-11 21:59:51] -rw-r--r-- 1 boinc boinc      8192 Oct 11 21:59 boinc_mmap_file
[2025-10-11 21:59:51] -rw-r--r-- 1 boinc boinc        23 Oct 11 21:59 wrapper_checkpoint.txt
[2025-10-11 21:59:51] -rw------- 1 boinc boinc        95 Oct 11 21:59 pilot_heartbeat.json
[2025-10-11 21:59:51] -rw------- 1 boinc boinc       817 Oct 11 21:59 pilotlog.txt
[2025-10-11 21:59:51] -rw------- 1 boinc boinc    177177 Oct 11 21:59 log.46676269._058472.job.log.1
[2025-10-11 21:59:51] -rw------- 1 boinc boinc       188 Oct 11 21:59 output.list
[2025-10-11 21:59:51] -rw-r--r-- 1 boinc boinc       620 Oct 11 21:59 runtime_log
[2025-10-11 21:59:51] -rw------- 1 boinc boinc    245760 Oct 11 21:59 result.tar.gz
[2025-10-11 21:59:51] -rw------- 1 boinc boinc       640 Oct 11 21:59 s1RNDm7yoR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZyRMDmZ59F6m.diag
[2025-10-11 21:59:51] -rw-r--r-- 1 boinc boinc      8505 Oct 11 21:59 runtime_log.err
[2025-10-11 21:59:51] -rw-r--r-- 1 boinc boinc     21878 Oct 11 21:59 stderr.txt
[2025-10-11 21:59:51] No HITS result produced
[2025-10-11 21:59:51]  *** Contents of shared directory: ***
[2025-10-11 21:59:51] total 215236
[2025-10-11 21:59:51] -rw-r--r-- 2 boinc boinc 219565661 Oct 11 21:51 ATLAS.root_0
[2025-10-11 21:59:51] -rw-r--r-- 2 boinc boinc    569680 Oct 11 21:51 input.tar.gz
[2025-10-11 21:59:51] -rw-r--r-- 2 boinc boinc     15120 Oct 11 21:51 start_atlas.sh
[2025-10-11 21:59:51] -rw------- 1 boinc boinc    245760 Oct 11 21:59 result.tar.gz
21:59:52 (1686654): run_atlas exited; CPU time 137.984155
21:59:52 (1686654): called boinc_finish(0)

</stderr_txt>
]]>

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