Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:12:29 (66232): wrapper (7.7.26015): starting
15:12:29 (66232): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 15:12:29] Arguments: --nthreads 8
[2025-10-11 15:12:29] Threads: 8
[2025-10-11 15:12:29] Checking for CVMFS
[2025-10-11 15:12:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 15:12:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 15:12:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 15:12:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 15:12:30] 2.13.2.0 3576101 128208 554076 151593 0 812 34841243 40960001 36626 16776704 52 262239640 99.681 236003790 21446 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 15:12:30] CVMFS is ok
[2025-10-11 15:12:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 15:12:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 15:12:30] Further information can be found at the LHC@home message board.
[2025-10-11 15:12:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 15:12:30] Checking for apptainer binary...
[2025-10-11 15:12:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 15:12:30] Running /usr/bin/apptainer --version
[2025-10-11 15:12:30] apptainer version 1.4.3-1.el9
[2025-10-11 15:12:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 15:12:31] c7-11-12.aglt2.org
[2025-10-11 15:12:31] apptainer works
[2025-10-11 15:12:31] Set ATHENA_PROC_NUMBER=8
[2025-10-11 15:12:31] Set ATHENA_CORE_NUMBER=8
[2025-10-11 15:12:31] Starting ATLAS job with PandaID=6838452538
[2025-10-11 15:12:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 18:07:20]  *** The last 200 lines of the pilot log: ***
[2025-10-11 18:07:20] 2025-10-11 22:06:31,238 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 18:07:20] 2025-10-11 22:06:31,241 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3281.8329062499984
[2025-10-11 18:07:20] 2025-10-11 22:06:31,250 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838452538/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 18:07:20] 2025-10-11 22:06:31,251 | INFO     | extracted standard info from prmon json
[2025-10-11 18:07:20] 2025-10-11 22:06:31,251 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 18:07:20] 2025-10-11 22:06:31,251 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 18:07:20] 2025-10-11 22:06:31,255 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 18:07:20] 2025-10-11 22:06:31,256 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 18:07:20] 2025-10-11 22:06:31,258 | INFO     | fitting pss+swap vs Time
[2025-10-11 18:07:20] 2025-10-11 22:06:31,259 | INFO     | sum of square deviations: 1523393055.9117587
[2025-10-11 18:07:20] 2025-10-11 22:06:31,259 | INFO     | sum of deviations: -17413564963.588223
[2025-10-11 18:07:20] 2025-10-11 22:06:31,260 | INFO     | mean x: 1760215185.5588236
[2025-10-11 18:07:20] 2025-10-11 22:06:31,260 | INFO     | mean y: 2169452.6588235293
[2025-10-11 18:07:20] 2025-10-11 22:06:31,260 | INFO     | -- intersect: 20122795160.3019
[2025-10-11 18:07:20] 2025-10-11 22:06:31,260 | INFO     | intersect: 20122795160.3019
[2025-10-11 18:07:20] 2025-10-11 22:06:31,260 | INFO     | chi2: 1.5911862444931975
[2025-10-11 18:07:20] 2025-10-11 22:06:31,260 | INFO     | sum of square deviations: 1392891333.3939378
[2025-10-11 18:07:20] 2025-10-11 22:06:31,261 | INFO     | sum of deviations: -15263380722.151512
[2025-10-11 18:07:20] 2025-10-11 22:06:31,261 | INFO     | mean x: 1760215033.060606
[2025-10-11 18:07:20] 2025-10-11 22:06:31,261 | INFO     | mean y: 2171953.7151515153
[2025-10-11 18:07:20] 2025-10-11 22:06:31,261 | INFO     | -- intersect: 19290706212.159027
[2025-10-11 18:07:20] 2025-10-11 22:06:31,261 | INFO     | intersect: 19290706212.159027
[2025-10-11 18:07:20] 2025-10-11 22:06:31,261 | INFO     | chi2: 1.5903630544962262
[2025-10-11 18:07:20] 2025-10-11 22:06:31,262 | INFO     | current chi2=1.5903630544962262 (change=0.05173435855294717 %)
[2025-10-11 18:07:20] 2025-10-11 22:06:31,262 | INFO     | right removable region: 164
[2025-10-11 18:07:20] 2025-10-11 22:06:31,262 | INFO     | sum of square deviations: 1392885233.3939378
[2025-10-11 18:07:20] 2025-10-11 22:06:31,263 | INFO     | sum of deviations: -38485488098.57576
[2025-10-11 18:07:20] 2025-10-11 22:06:31,263 | INFO     | mean x: 1760215338.060606
[2025-10-11 18:07:20] 2025-10-11 22:06:31,263 | INFO     | mean y: 2193748.1575757577
[2025-10-11 18:07:20] 2025-10-11 22:06:31,263 | INFO     | -- intersect: 48637030861.62051
[2025-10-11 18:07:20] 2025-10-11 22:06:31,263 | INFO     | intersect: 48637030861.62051
[2025-10-11 18:07:20] 2025-10-11 22:06:31,263 | INFO     | chi2: 0.20346025253745467
[2025-10-11 18:07:20] 2025-10-11 22:06:31,263 | INFO     | current chi2=0.20346025253745467 (change=87.2132974224989 %)
[2025-10-11 18:07:20] 2025-10-11 22:06:31,263 | INFO     | sum of square deviations: 1270051973.375
[2025-10-11 18:07:20] 2025-10-11 22:06:31,264 | INFO     | sum of deviations: -32506190807.312492
[2025-10-11 18:07:20] 2025-10-11 22:06:31,264 | INFO     | mean x: 1760215490.5625
[2025-10-11 18:07:20] 2025-10-11 22:06:31,264 | INFO     | mean y: 2186314.88125
[2025-10-11 18:07:20] 2025-10-11 22:06:31,264 | INFO     | -- intersect: 45053807664.01594
[2025-10-11 18:07:20] 2025-10-11 22:06:31,264 | INFO     | intersect: 45053807664.01594
[2025-10-11 18:07:20] 2025-10-11 22:06:31,264 | INFO     | chi2: 0.18840547654229367
[2025-10-11 18:07:20] 2025-10-11 22:06:31,265 | INFO     | current chi2=0.18840547654229367 (change=7.399369561083972 %)
[2025-10-11 18:07:20] 2025-10-11 22:06:31,265 | INFO     | left removable region: 20
[2025-10-11 18:07:20] 2025-10-11 22:06:31,265 | INFO     | sum of square deviations: 925866609.4375
[2025-10-11 18:07:20] 2025-10-11 22:06:31,265 | INFO     | sum of deviations: -20994385914.749996
[2025-10-11 18:07:20] 2025-10-11 22:06:31,266 | INFO     | mean x: 1760215612.5625
[2025-10-11 18:07:20] 2025-10-11 22:06:31,266 | INFO     | mean y: 2176021.1944444445
[2025-10-11 18:07:20] 2025-10-11 22:06:31,266 | INFO     | -- intersect: 39915750489.28825
[2025-10-11 18:07:20] 2025-10-11 22:06:31,266 | INFO     | intersect: 39915750489.28825
[2025-10-11 18:07:20] 2025-10-11 22:06:31,266 | INFO     | chi2: 0.1520417112795753
[2025-10-11 18:07:20] 2025-10-11 22:06:31,266 | INFO     | -- intersect: 39915750489.28825
[2025-10-11 18:07:20] 2025-10-11 22:06:31,266 | INFO     | current memory leak: -22.68 B/s (using 144 data points, chi2=0.15)
[2025-10-11 18:07:20] 2025-10-11 22:06:31,267 | INFO     | could have reported an average CPU frequency of 3280 MHz (9 samples)
[2025-10-11 18:07:20] 2025-10-11 22:06:31,267 | INFO     | ..............................
[2025-10-11 18:07:20] 2025-10-11 22:06:31,267 | INFO     | . Timing measurements:
[2025-10-11 18:07:20] 2025-10-11 22:06:31,267 | INFO     | . get job = 0 s
[2025-10-11 18:07:20] 2025-10-11 22:06:31,267 | INFO     | . initial setup = 2 s
[2025-10-11 18:07:20] 2025-10-11 22:06:31,267 | INFO     | . payload setup = 14 s
[2025-10-11 18:07:20] 2025-10-11 22:06:31,267 | INFO     | . stage-in = 0 s
[2025-10-11 18:07:20] 2025-10-11 22:06:31,267 | INFO     | . payload execution = 10352 s
[2025-10-11 18:07:20] 2025-10-11 22:06:31,267 | INFO     | . stage-out = 1 s
[2025-10-11 18:07:20] 2025-10-11 22:06:31,267 | INFO     | . log creation = 0 s
[2025-10-11 18:07:20] 2025-10-11 22:06:31,267 | INFO     | ..............................
[2025-10-11 18:07:20] 2025-10-11 22:06:31,368 | INFO     | 
[2025-10-11 18:07:20] 2025-10-11 22:06:31,368 | INFO     | job summary report
[2025-10-11 18:07:20] 2025-10-11 22:06:31,368 | INFO     | --------------------------------------------------
[2025-10-11 18:07:20] 2025-10-11 22:06:31,368 | INFO     | PanDA job id: 6838452538
[2025-10-11 18:07:20] 2025-10-11 22:06:31,368 | INFO     | task id: 46676269
[2025-10-11 18:07:20] 2025-10-11 22:06:31,368 | INFO     | errors: (none)
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | pilot state: finished 
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | transexitcode: 0
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | exeerrorcode: 0
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | exeerrordiag: 
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | exitcode: 0
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | exitmsg: OK
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | cpuconsumptiontime: 33644 s
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | nevents: 400
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | neventsw: 0
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | pid: 85420
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | pgrp: 85420
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | corecount: 8
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | event service: False
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | sizes: {0: 2348635, 1: 2348834, 12: 2348834, 15: 2349124, 22: 2349152, 10370: 2378429, 10372: 2387427, 10374: 2387483, 10385: 2387741}
[2025-10-11 18:07:20] 2025-10-11 22:06:31,369 | INFO     | --------------------------------------------------
[2025-10-11 18:07:20] 2025-10-11 22:06:31,370 | INFO     | 
[2025-10-11 18:07:20] 2025-10-11 22:06:31,370 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 18:07:20] 2025-10-11 22:06:31,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,393 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,393 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,393 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,394 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,394 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,394 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,394 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,394 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,394 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 18:07:20] 2025-10-11 22:06:31,394 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,394 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 18:07:20] 2025-10-11 22:06:31,394 | INFO     | job 6838452538 has completed (purged errors)
[2025-10-11 18:07:20] 2025-10-11 22:06:31,394 | INFO     | overall cleanup function is called
[2025-10-11 18:07:20] 2025-10-11 22:06:31,507 | INFO     | PID=70211 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 18:07:20] 2025-10-11 22:06:31,507 | INFO     | .. there are 43 such processes running
[2025-10-11 18:07:20] 2025-10-11 22:06:32,413 | INFO     | --- collectZombieJob: --- 10, [85420]
[2025-10-11 18:07:20] 2025-10-11 22:06:32,413 | INFO     | zombie collector waiting for pid 85420
[2025-10-11 18:07:20] 2025-10-11 22:06:32,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 18:07:20] 2025-10-11 22:06:32,413 | INFO     | collected zombie processes
[2025-10-11 18:07:20] 2025-10-11 22:06:32,413 | INFO     | will attempt to kill all subprocesses of pid=85420
[2025-10-11 18:07:20] 2025-10-11 22:06:32,855 | INFO     | process IDs to be killed: [85420] (in reverse order)
[2025-10-11 18:07:20] 2025-10-11 22:06:33,014 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 18:07:20] 2025-10-11 22:06:33,015 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 18:07:20] 2025-10-11 22:06:33,036 | INFO     | did not find any defunct processes belonging to 85420
[2025-10-11 18:07:20] 2025-10-11 22:06:33,057 | INFO     | did not find any defunct processes belonging to 85420
[2025-10-11 18:07:20] 2025-10-11 22:06:33,057 | INFO     | ready for new job
[2025-10-11 18:07:20] 2025-10-11 22:06:33,058 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 18:07:20] 2025-10-11 22:06:33,060 | INFO     | ***************************************
[2025-10-11 18:07:20] 2025-10-11 22:06:33,061 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 18:07:20] 2025-10-11 22:06:33,061 | INFO     | ***************************************
[2025-10-11 18:07:20] 2025-10-11 22:06:33,061 | INFO     | 
[2025-10-11 18:07:20] 2025-10-11 22:06:33,078 | INFO     | architecture information:
[2025-10-11 18:07:20] 2025-10-11 22:06:33,079 | INFO     | executing command: cat /etc/os-release
[2025-10-11 18:07:20] 2025-10-11 22:06:33,100 | INFO     | cat /etc/os-release:
[2025-10-11 18:07:20] NAME="CentOS Linux"
[2025-10-11 18:07:20] VERSION="7 (Core)"
[2025-10-11 18:07:20] ID="centos"
[2025-10-11 18:07:20] ID_LIKE="rhel fedora"
[2025-10-11 18:07:20] VERSION_ID="7"
[2025-10-11 18:07:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 18:07:20] ANSI_COLOR="0;31"
[2025-10-11 18:07:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 18:07:20] HOME_URL="https://www.centos.org/"
[2025-10-11 18:07:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 18:07:20] 
[2025-10-11 18:07:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 18:07:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 18:07:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 18:07:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 18:07:20] 
[2025-10-11 18:07:20] 2025-10-11 22:06:33,100 | INFO     | ***************************************
[2025-10-11 18:07:20] 2025-10-11 22:06:33,604 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 18:07:20] 2025-10-11 22:06:33,630 | INFO     | sufficient remaining disk space (84348502016 B)
[2025-10-11 18:07:20] 2025-10-11 22:06:33,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 18:07:20] 2025-10-11 22:06:33,630 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 18:07:20] 2025-10-11 22:06:33,630 | INFO     | update_server=False
[2025-10-11 18:07:20] 2025-10-11 22:06:33,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 18:07:20] 2025-10-11 22:06:33,630 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 18:07:20] 2025-10-11 22:06:33,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:07:20] 2025-10-11 22:06:33,786 | INFO     | aborting loop
[2025-10-11 18:07:20] 2025-10-11 22:06:33,919 | INFO     | all payload control threads have been joined
[2025-10-11 18:07:20] 2025-10-11 22:06:34,398 | INFO     | all job control threads have been joined
[2025-10-11 18:07:20] 2025-10-11 22:06:34,603 | INFO     | all data control threads have been joined
[2025-10-11 18:07:20] 2025-10-11 22:06:34,636 | INFO     | [job] retrieve thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:34,652 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:34,795 | INFO     | [job] job monitor thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:34,802 | INFO     | [data] copytool_in thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:34,937 | INFO     | [payload] control thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:34,971 | INFO     | [job] validate thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:35,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 18:07:20] 2025-10-11 22:06:35,107 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:35,164 | INFO     | [payload] validate_post thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:35,404 | INFO     | [job] control thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:35,464 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:35,609 | INFO     | [data] control thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:35,638 | INFO     | [data] copytool_out thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:35,954 | INFO     | [payload] failed_post thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:36,389 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:07:20] 2025-10-11 22:06:37,394 | INFO     | [job] queue monitor thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:39,060 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:06:44,489 | INFO     | job.realtimelogging is not enabled
[2025-10-11 18:07:20] 2025-10-11 22:06:45,495 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 18:07:20] 2025-10-11 22:07:04,323 | INFO     | PID=70211 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 18:07:20] 2025-10-11 22:07:04,324 | INFO     | .. there are 45 such processes running
[2025-10-11 18:07:20] 2025-10-11 22:07:04,324 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 18:07:20] 2025-10-11 22:07:04,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 18:07:20] 2025-10-11 22:07:04,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 18:07:20] 2025-10-11 22:07:13,847 | INFO     | [monitor] cgroup control has ended
[2025-10-11 18:07:20] 2025-10-11 22:07:15,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140045766825792)>', '<ExcThread(monitor, started 140045411391232)>']
[2025-10-11 18:07:20] 2025-10-11 22:07:15,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 18:07:20] 2025-10-11 22:07:15,388 | INFO     | [monitor] control thread has ended
[2025-10-11 18:07:20] 2025-10-11 22:07:20,387 | INFO     | all workflow threads have been joined
[2025-10-11 18:07:20] 2025-10-11 22:07:20,387 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 18:07:20] 2025-10-11 22:07:20,388 | INFO     | traces error code: 0
[2025-10-11 18:07:20] 2025-10-11 22:07:20,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 18:07:20] 2025-10-11 22:07:20,541 [wrapper] ==== pilot stdout END ====
[2025-10-11 18:07:20] 2025-10-11 22:07:20,543 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 18:07:20] 2025-10-11 22:07:20,546 [wrapper] pilotpid: 70211
[2025-10-11 18:07:20] 2025-10-11 22:07:20,551 [wrapper] Pilot exit status: 0
[2025-10-11 18:07:20] 2025-10-11 22:07:20,584 [wrapper] pandaids: 6838452538
[2025-10-11 18:07:20] 2025-10-11 22:07:20,706 [wrapper] cleanup supervisor_pilot  983842 70212
[2025-10-11 18:07:20] 2025-10-11 22:07:20,710 [wrapper] Test setup, not cleaning
[2025-10-11 18:07:20] 2025-10-11 22:07:20,712 [wrapper] apfmon messages muted
[2025-10-11 18:07:20] 2025-10-11 22:07:20,716 [wrapper] ==== wrapper stdout END ====
[2025-10-11 18:07:20] 2025-10-11 22:07:20,730 [wrapper] ==== wrapper stderr END ====
[2025-10-11 18:07:20]  *** Error codes and diagnostics ***
[2025-10-11 18:07:20]     "exeErrorCode": 0,
[2025-10-11 18:07:20]     "exeErrorDiag": "",
[2025-10-11 18:07:20]     "pilotErrorCode": 0,
[2025-10-11 18:07:20]     "pilotErrorDiag": "",
[2025-10-11 18:07:20]  *** Listing of results directory ***
[2025-10-11 18:07:20] total 416176
[2025-10-11 18:07:20] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 09:40 pilot3.tar.gz
[2025-10-11 18:07:20] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 09:41 queuedata.json
[2025-10-11 18:07:20] -rwx------. 1 boincer umatlas     36292 Oct 11 09:42 runpilot2-wrapper.sh
[2025-10-11 18:07:20] -rw-r--r--. 1 boincer umatlas       100 Oct 11 15:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 18:07:20] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 15:12 run_atlas
[2025-10-11 18:07:20] -rw-r--r--. 1 boincer umatlas       105 Oct 11 15:12 job.xml
[2025-10-11 18:07:20] -rw-r--r--. 2 boincer umatlas 220565168 Oct 11 15:12 EVNT.46676267._002347.pool.root.1
[2025-10-11 18:07:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 15:12 start_atlas.sh
[2025-10-11 18:07:20] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 15:12 shared
[2025-10-11 18:07:20] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 15:12 input.tar.gz
[2025-10-11 18:07:20] -rw-r--r--. 1 boincer umatlas         0 Oct 11 15:12 boinc_lockfile
[2025-10-11 18:07:20] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 15:12 pandaJob.out
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas    975520 Oct 11 15:12 agis_schedconf.cvmfs.json
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas   1560580 Oct 11 15:12 agis_ddmendpoints.agis.ALL.json
[2025-10-11 18:07:20] drwx------. 5 boincer umatlas      4096 Oct 11 15:12 pilot3
[2025-10-11 18:07:20] -rw-r--r--. 1 boincer umatlas      6897 Oct 11 18:01 init_data.xml
[2025-10-11 18:07:20] -rw-r--r--. 1 boincer umatlas       531 Oct 11 18:05 boinc_task_state.xml
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas 198125236 Oct 11 18:05 HITS.46676269._058540.pool.root.1
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas        95 Oct 11 18:06 pilot_heartbeat.json
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas      1046 Oct 11 18:06 memory_monitor_summary.json
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas    415614 Oct 11 18:06 log.46676269._058540.job.log.tgz.1
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas      7808 Oct 11 18:06 heartbeat.json
[2025-10-11 18:07:20] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 18:07 boinc_mmap_file
[2025-10-11 18:07:20] -rw-r--r--. 1 boincer umatlas        28 Oct 11 18:07 wrapper_checkpoint.txt
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas      4894 Oct 11 18:07 pilotlog.txt
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas   1370380 Oct 11 18:07 log.46676269._058540.job.log.1
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas       357 Oct 11 18:07 output.list
[2025-10-11 18:07:20] -rw-r--r--. 1 boincer umatlas       620 Oct 11 18:07 runtime_log
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas   1802240 Oct 11 18:07 result.tar.gz
[2025-10-11 18:07:20] -rw-r--r--. 1 boincer umatlas      8704 Oct 11 18:07 runtime_log.err
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas       659 Oct 11 18:07 ejXMDm22oR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8zRMDm78WKSn.diag
[2025-10-11 18:07:20] -rw-r--r--. 1 boincer umatlas     21227 Oct 11 18:07 stderr.txt
[2025-10-11 18:07:20] HITS file was successfully produced:
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas 198125236 Oct 11 18:05 shared/HITS.pool.root.1
[2025-10-11 18:07:20]  *** Contents of shared directory: ***
[2025-10-11 18:07:20] total 411224
[2025-10-11 18:07:20] -rw-r--r--. 2 boincer umatlas 220565168 Oct 11 15:12 ATLAS.root_0
[2025-10-11 18:07:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 15:12 start_atlas.sh
[2025-10-11 18:07:20] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 15:12 input.tar.gz
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas 198125236 Oct 11 18:05 HITS.pool.root.1
[2025-10-11 18:07:20] -rw-------. 1 boincer umatlas   1802240 Oct 11 18:07 result.tar.gz
18:07:22 (66232): run_atlas exited; CPU time 33867.822545
18:07:22 (66232): called boinc_finish(0)

</stderr_txt>
]]>

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