Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:37:34 (715170): wrapper (7.7.26015): starting
18:37:34 (715170): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 18:37:34] Arguments: --nthreads 9
[2025-10-11 18:37:34] Threads: 9
[2025-10-11 18:37:34] Checking for CVMFS
[2025-10-11 18:37:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:37:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:37:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:37:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:37:35] 2.13.2.0 128937 115159 184772 151599 2 144 29539503 39288833 5870 16776704 0 64535944 99.692 51271107 34871 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 18:37:35] CVMFS is ok
[2025-10-11 18:37:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:37:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:37:35] Further information can be found at the LHC@home message board.
[2025-10-11 18:37:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:37:35] Checking for apptainer binary...
[2025-10-11 18:37:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:37:35] Running /usr/bin/apptainer --version
[2025-10-11 18:37:35] apptainer version 1.4.3-1.el9
[2025-10-11 18:37:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:37:35] c-210-22.aglt2.org
[2025-10-11 18:37:35] apptainer works
[2025-10-11 18:37:35] Set ATHENA_PROC_NUMBER=9
[2025-10-11 18:37:35] Set ATHENA_CORE_NUMBER=9
[2025-10-11 18:37:35] Starting ATLAS job with PandaID=6838632541
[2025-10-11 18:37:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:24:14]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:24:14] 2025-10-12 01:23:36,575 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:24:14] 2025-10-12 01:23:36,578 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:24:14] 2025-10-12 01:23:36,579 | INFO     | sum of square deviations: 1342975215.8650258
[2025-10-11 21:24:14] 2025-10-12 01:23:36,580 | INFO     | sum of deviations: -34739161514.90798
[2025-10-11 21:24:14] 2025-10-12 01:23:36,580 | INFO     | mean x: 1760227237.2944784
[2025-10-11 21:24:14] 2025-10-12 01:23:36,580 | INFO     | mean y: 2614745.435582822
[2025-10-11 21:24:14] 2025-10-12 01:23:36,580 | INFO     | -- intersect: 45534965288.424934
[2025-10-11 21:24:14] 2025-10-12 01:23:36,581 | INFO     | intersect: 45534965288.424934
[2025-10-11 21:24:14] 2025-10-12 01:23:36,581 | INFO     | chi2: 2.34903952955091
[2025-10-11 21:24:14] 2025-10-12 01:23:36,581 | INFO     | sum of square deviations: 1223164352.9177215
[2025-10-11 21:24:14] 2025-10-12 01:23:36,582 | INFO     | sum of deviations: -22864059997.101265
[2025-10-11 21:24:14] 2025-10-12 01:23:36,582 | INFO     | mean x: 1760227084.8037975
[2025-10-11 21:24:14] 2025-10-12 01:23:36,583 | INFO     | mean y: 2629529.835443038
[2025-10-11 21:24:14] 2025-10-12 01:23:36,583 | INFO     | -- intersect: 32905761132.284863
[2025-10-11 21:24:14] 2025-10-12 01:23:36,583 | INFO     | intersect: 32905761132.284863
[2025-10-11 21:24:14] 2025-10-12 01:23:36,583 | INFO     | chi2: 1.6677316512614868
[2025-10-11 21:24:14] 2025-10-12 01:23:36,583 | INFO     | current chi2=1.6677316512614868 (change=29.003678725648175 %)
[2025-10-11 21:24:14] 2025-10-12 01:23:36,584 | INFO     | sum of square deviations: 1110673177.7647026
[2025-10-11 21:24:14] 2025-10-12 01:23:36,585 | INFO     | sum of deviations: -21637801941.35294
[2025-10-11 21:24:14] 2025-10-12 01:23:36,585 | INFO     | mean x: 1760226932.2941177
[2025-10-11 21:24:14] 2025-10-12 01:23:36,585 | INFO     | mean y: 2631189.9411764704
[2025-10-11 21:24:14] 2025-10-12 01:23:36,585 | INFO     | -- intersect: 34294844682.904686
[2025-10-11 21:24:14] 2025-10-12 01:23:36,585 | INFO     | intersect: 34294844682.904686
[2025-10-11 21:24:14] 2025-10-12 01:23:36,585 | INFO     | chi2: 1.6638831316131952
[2025-10-11 21:24:14] 2025-10-12 01:23:36,586 | INFO     | current chi2=1.6638831316131952 (change=0.23076372301146456 %)
[2025-10-11 21:24:14] 2025-10-12 01:23:36,586 | INFO     | right removable region: 152
[2025-10-11 21:24:14] 2025-10-12 01:23:36,586 | INFO     | sum of square deviations: 1223135072.9177215
[2025-10-11 21:24:14] 2025-10-12 01:23:36,587 | INFO     | sum of deviations: -57695571760.60756
[2025-10-11 21:24:14] 2025-10-12 01:23:36,587 | INFO     | mean x: 1760227389.8037975
[2025-10-11 21:24:14] 2025-10-12 01:23:36,587 | INFO     | mean y: 2643497.0126582277
[2025-10-11 21:24:14] 2025-10-12 01:23:36,587 | INFO     | -- intersect: 83032987350.33093
[2025-10-11 21:24:14] 2025-10-12 01:23:36,588 | INFO     | intersect: 83032987350.33093
[2025-10-11 21:24:14] 2025-10-12 01:23:36,588 | INFO     | chi2: 0.9875440178348316
[2025-10-11 21:24:14] 2025-10-12 01:23:36,588 | INFO     | current chi2=0.9875440178348316 (change=57.95966796592688 %)
[2025-10-11 21:24:14] 2025-10-12 01:23:36,588 | INFO     | sum of square deviations: 1110643904.9411807
[2025-10-11 21:24:14] 2025-10-12 01:23:36,589 | INFO     | sum of deviations: -50966875061.64707
[2025-10-11 21:24:14] 2025-10-12 01:23:36,590 | INFO     | mean x: 1760227542.3137255
[2025-10-11 21:24:14] 2025-10-12 01:23:36,590 | INFO     | mean y: 2634358.117647059
[2025-10-11 21:24:14] 2025-10-12 01:23:36,590 | INFO     | -- intersect: 80778566977.0653
[2025-10-11 21:24:14] 2025-10-12 01:23:36,590 | INFO     | intersect: 80778566977.0653
[2025-10-11 21:24:14] 2025-10-12 01:23:36,590 | INFO     | chi2: 0.9824536403148662
[2025-10-11 21:24:14] 2025-10-12 01:23:36,590 | INFO     | current chi2=0.9824536403148662 (change=0.515458291279611 %)
[2025-10-11 21:24:14] 2025-10-12 01:23:36,591 | INFO     | left removable region: 20
[2025-10-11 21:24:14] 2025-10-12 01:23:36,591 | INFO     | sum of square deviations: 713231883.6363636
[2025-10-11 21:24:14] 2025-10-12 01:23:36,592 | INFO     | sum of deviations: -23897269565.54546
[2025-10-11 21:24:14] 2025-10-12 01:23:36,592 | INFO     | mean x: 1760227511.8181818
[2025-10-11 21:24:14] 2025-10-12 01:23:36,592 | INFO     | mean y: 2630153.5606060605
[2025-10-11 21:24:14] 2025-10-12 01:23:36,592 | INFO     | -- intersect: 58980127250.500275
[2025-10-11 21:24:14] 2025-10-12 01:23:36,592 | INFO     | intersect: 58980127250.500275
[2025-10-11 21:24:14] 2025-10-12 01:23:36,592 | INFO     | chi2: 0.22926295678578895
[2025-10-11 21:24:14] 2025-10-12 01:23:36,593 | INFO     | -- intersect: 58980127250.500275
[2025-10-11 21:24:14] 2025-10-12 01:23:36,593 | INFO     | current memory leak: -33.51 B/s (using 132 data points, chi2=0.23)
[2025-10-11 21:24:14] 2025-10-12 01:23:36,593 | INFO     | could have reported an average CPU frequency of 2609 MHz (9 samples)
[2025-10-11 21:24:14] 2025-10-12 01:23:36,594 | INFO     | ..............................
[2025-10-11 21:24:14] 2025-10-12 01:23:36,594 | INFO     | . Timing measurements:
[2025-10-11 21:24:14] 2025-10-12 01:23:36,594 | INFO     | . get job = 0 s
[2025-10-11 21:24:14] 2025-10-12 01:23:36,594 | INFO     | . initial setup = 2 s
[2025-10-11 21:24:14] 2025-10-12 01:23:36,594 | INFO     | . payload setup = 6 s
[2025-10-11 21:24:14] 2025-10-12 01:23:36,594 | INFO     | . stage-in = 0 s
[2025-10-11 21:24:14] 2025-10-12 01:23:36,594 | INFO     | . payload execution = 9911 s
[2025-10-11 21:24:14] 2025-10-12 01:23:36,594 | INFO     | . stage-out = 1 s
[2025-10-11 21:24:14] 2025-10-12 01:23:36,594 | INFO     | . log creation = 0 s
[2025-10-11 21:24:14] 2025-10-12 01:23:36,594 | INFO     | ..............................
[2025-10-11 21:24:14] 2025-10-12 01:23:36,708 | INFO     | 
[2025-10-11 21:24:14] 2025-10-12 01:23:36,708 | INFO     | job summary report
[2025-10-11 21:24:14] 2025-10-12 01:23:36,708 | INFO     | --------------------------------------------------
[2025-10-11 21:24:14] 2025-10-12 01:23:36,708 | INFO     | PanDA job id: 6838632541
[2025-10-11 21:24:14] 2025-10-12 01:23:36,708 | INFO     | task id: 46676269
[2025-10-11 21:24:14] 2025-10-12 01:23:36,708 | INFO     | errors: (none)
[2025-10-11 21:24:14] 2025-10-12 01:23:36,708 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:24:14] 2025-10-12 01:23:36,709 | INFO     | pilot state: finished 
[2025-10-11 21:24:14] 2025-10-12 01:23:36,709 | INFO     | transexitcode: 0
[2025-10-11 21:24:14] 2025-10-12 01:23:36,709 | INFO     | exeerrorcode: 0
[2025-10-11 21:24:14] 2025-10-12 01:23:36,709 | INFO     | exeerrordiag: 
[2025-10-11 21:24:14] 2025-10-12 01:23:36,709 | INFO     | exitcode: 0
[2025-10-11 21:24:14] 2025-10-12 01:23:36,709 | INFO     | exitmsg: OK
[2025-10-11 21:24:14] 2025-10-12 01:23:36,709 | INFO     | cpuconsumptiontime: 51236 s
[2025-10-11 21:24:14] 2025-10-12 01:23:36,709 | INFO     | nevents: 400
[2025-10-11 21:24:14] 2025-10-12 01:23:36,709 | INFO     | neventsw: 0
[2025-10-11 21:24:14] 2025-10-12 01:23:36,709 | INFO     | pid: 725996
[2025-10-11 21:24:14] 2025-10-12 01:23:36,710 | INFO     | pgrp: 725996
[2025-10-11 21:24:14] 2025-10-12 01:23:36,710 | INFO     | corecount: 9
[2025-10-11 21:24:14] 2025-10-12 01:23:36,710 | INFO     | event service: False
[2025-10-11 21:24:14] 2025-10-12 01:23:36,710 | INFO     | sizes: {0: 2348742, 1: 2348884, 5: 2349146, 11: 2349202, 9921: 2377905, 9923: 2387087, 9931: 2387289}
[2025-10-11 21:24:14] 2025-10-12 01:23:36,710 | INFO     | --------------------------------------------------
[2025-10-11 21:24:14] 2025-10-12 01:23:36,710 | INFO     | 
[2025-10-11 21:24:14] 2025-10-12 01:23:36,710 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 21:24:14] 2025-10-12 01:23:36,733 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,733 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,733 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,733 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,733 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,734 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,734 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,734 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,734 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,734 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,734 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,734 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,734 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,734 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,734 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,735 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,735 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:24:14] 2025-10-12 01:23:36,735 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,735 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:24:14] 2025-10-12 01:23:36,735 | INFO     | job 6838632541 has completed (purged errors)
[2025-10-11 21:24:14] 2025-10-12 01:23:36,736 | INFO     | overall cleanup function is called
[2025-10-11 21:24:14] 2025-10-12 01:23:37,744 | INFO     | --- collectZombieJob: --- 10, [725996]
[2025-10-11 21:24:14] 2025-10-12 01:23:37,744 | INFO     | zombie collector waiting for pid 725996
[2025-10-11 21:24:14] 2025-10-12 01:23:37,745 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:24:14] 2025-10-12 01:23:37,745 | INFO     | collected zombie processes
[2025-10-11 21:24:14] 2025-10-12 01:23:37,745 | INFO     | will attempt to kill all subprocesses of pid=725996
[2025-10-11 21:24:14] 2025-10-12 01:23:38,137 | INFO     | process IDs to be killed: [725996] (in reverse order)
[2025-10-11 21:24:14] 2025-10-12 01:23:38,217 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:24:14] 2025-10-12 01:23:38,217 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:24:14] 2025-10-12 01:23:38,226 | INFO     | did not find any defunct processes belonging to 725996
[2025-10-11 21:24:14] 2025-10-12 01:23:38,240 | INFO     | did not find any defunct processes belonging to 725996
[2025-10-11 21:24:14] 2025-10-12 01:23:38,240 | INFO     | ready for new job
[2025-10-11 21:24:14] 2025-10-12 01:23:38,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:24:14] 2025-10-12 01:23:38,247 | INFO     | ***************************************
[2025-10-11 21:24:14] 2025-10-12 01:23:38,247 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:24:14] 2025-10-12 01:23:38,247 | INFO     | ***************************************
[2025-10-11 21:24:14] 2025-10-12 01:23:38,247 | INFO     | 
[2025-10-11 21:24:14] 2025-10-12 01:23:38,253 | INFO     | architecture information:
[2025-10-11 21:24:14] 2025-10-12 01:23:38,257 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:24:14] 2025-10-12 01:23:38,322 | INFO     | cat /etc/os-release:
[2025-10-11 21:24:14] NAME="CentOS Linux"
[2025-10-11 21:24:14] VERSION="7 (Core)"
[2025-10-11 21:24:14] ID="centos"
[2025-10-11 21:24:14] ID_LIKE="rhel fedora"
[2025-10-11 21:24:14] VERSION_ID="7"
[2025-10-11 21:24:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:24:14] ANSI_COLOR="0;31"
[2025-10-11 21:24:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:24:14] HOME_URL="https://www.centos.org/"
[2025-10-11 21:24:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:24:14] 
[2025-10-11 21:24:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:24:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:24:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:24:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:24:14] 
[2025-10-11 21:24:14] 2025-10-12 01:23:38,322 | INFO     | ***************************************
[2025-10-11 21:24:14] 2025-10-12 01:23:38,825 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 21:24:14] 2025-10-12 01:23:38,910 | INFO     | sufficient remaining disk space (53116665856 B)
[2025-10-11 21:24:14] 2025-10-12 01:23:38,911 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:24:14] 2025-10-12 01:23:38,911 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:24:14] 2025-10-12 01:23:38,911 | INFO     | update_server=False
[2025-10-11 21:24:14] 2025-10-12 01:23:38,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:24:14] 2025-10-12 01:23:38,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:24:14] 2025-10-12 01:23:39,142 | INFO     | all payload control threads have been joined
[2025-10-11 21:24:14] 2025-10-12 01:23:39,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:24:14] 2025-10-12 01:23:39,217 | INFO     | all data control threads have been joined
[2025-10-11 21:24:14] 2025-10-12 01:23:39,220 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 21:24:14] 2025-10-12 01:23:39,221 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 21:24:14] 2025-10-12 01:23:39,221 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:24:14] 2025-10-12 01:23:39,221 | INFO     | will abort loop
[2025-10-11 21:24:14] 2025-10-12 01:23:39,917 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:40,022 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:40,108 | INFO     | [job] validate thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:40,118 | INFO     | all job control threads have been joined
[2025-10-11 21:24:14] 2025-10-12 01:23:40,148 | INFO     | [payload] control thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:40,223 | INFO     | [data] control thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:40,225 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:40,247 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:40,497 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:40,804 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:40,805 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:40,962 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:41,124 | INFO     | [job] control thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:41,344 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:41,361 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:41,729 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:24:14] 2025-10-12 01:23:42,735 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:23:43,162 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:24:14] 2025-10-12 01:24:05,917 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:24:14] 2025-10-12 01:24:07,715 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139750689761088)>', '<ExcThread(monitor, started 139749964633856)>']
[2025-10-11 21:24:14] 2025-10-12 01:24:09,299 | INFO     | PID=719543 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 21:24:14] 2025-10-12 01:24:09,299 | INFO     | .. there are 7 such processes running
[2025-10-11 21:24:14] 2025-10-12 01:24:09,299 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:24:14] 2025-10-12 01:24:09,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:24:14] 2025-10-12 01:24:09,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:24:14] 2025-10-12 01:24:09,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:24:14] 2025-10-12 01:24:09,300 | INFO     | [monitor] control thread has ended
[2025-10-11 21:24:14] 2025-10-12 01:24:12,744 | INFO     | all workflow threads have been joined
[2025-10-11 21:24:14] 2025-10-12 01:24:12,749 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:24:14] 2025-10-12 01:24:12,768 | INFO     | traces error code: 0
[2025-10-11 21:24:14] 2025-10-12 01:24:12,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:24:14] 2025-10-12 01:24:12,929 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:24:14] 2025-10-12 01:24:12,933 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:24:14] 2025-10-12 01:24:12,936 [wrapper] pilotpid: 719543
[2025-10-11 21:24:14] 2025-10-12 01:24:12,940 [wrapper] Pilot exit status: 0
[2025-10-11 21:24:14] 2025-10-12 01:24:13,047 [wrapper] pandaids: 6838632541
[2025-10-11 21:24:14] 2025-10-12 01:24:13,530 [wrapper] cleanup supervisor_pilot  990595 719544
[2025-10-11 21:24:14] 2025-10-12 01:24:13,591 [wrapper] Test setup, not cleaning
[2025-10-11 21:24:14] 2025-10-12 01:24:13,649 [wrapper] apfmon messages muted
[2025-10-11 21:24:14] 2025-10-12 01:24:13,709 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:24:14] 2025-10-12 01:24:13,768 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:24:14]  *** Error codes and diagnostics ***
[2025-10-11 21:24:14]     "exeErrorCode": 0,
[2025-10-11 21:24:14]     "exeErrorDiag": "",
[2025-10-11 21:24:14]     "pilotErrorCode": 0,
[2025-10-11 21:24:14]     "pilotErrorDiag": "",
[2025-10-11 21:24:14]  *** Listing of results directory ***
[2025-10-11 21:24:14] total 413300
[2025-10-11 21:24:14] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 12:20 pilot3.tar.gz
[2025-10-11 21:24:14] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 12:27 queuedata.json
[2025-10-11 21:24:14] -rwx------. 1 boincer umatlas     36292 Oct 11 12:28 runpilot2-wrapper.sh
[2025-10-11 21:24:14] -rw-r--r--. 1 boincer umatlas       100 Oct 11 18:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:24:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 18:37 run_atlas
[2025-10-11 21:24:14] -rw-r--r--. 1 boincer umatlas       105 Oct 11 18:37 job.xml
[2025-10-11 21:24:14] -rw-r--r--. 2 boincer umatlas 221118183 Oct 11 18:37 EVNT.46676267._002452.pool.root.1
[2025-10-11 21:24:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 18:37 start_atlas.sh
[2025-10-11 21:24:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 18:37 shared
[2025-10-11 21:24:14] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 18:37 input.tar.gz
[2025-10-11 21:24:14] -rw-r--r--. 1 boincer umatlas         0 Oct 11 18:37 boinc_lockfile
[2025-10-11 21:24:14] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 18:37 pandaJob.out
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas    975520 Oct 11 18:37 agis_schedconf.cvmfs.json
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas   1560580 Oct 11 18:37 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:24:14] drwx------. 5 boincer umatlas      4096 Oct 11 18:37 pilot3
[2025-10-11 21:24:14] -rw-r--r--. 1 boincer umatlas      6660 Oct 11 21:19 init_data.xml
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas 194634228 Oct 11 21:22 HITS.46676269._061051.pool.root.1
[2025-10-11 21:24:14] -rw-r--r--. 1 boincer umatlas       529 Oct 11 21:22 boinc_task_state.xml
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas      1042 Oct 11 21:23 memory_monitor_summary.json
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas    408378 Oct 11 21:23 log.46676269._061051.job.log.tgz.1
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas        95 Oct 11 21:23 pilot_heartbeat.json
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas      7829 Oct 11 21:23 heartbeat.json
[2025-10-11 21:24:14] -rw-r--r--. 1 boincer umatlas        27 Oct 11 21:24 wrapper_checkpoint.txt
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas      5008 Oct 11 21:24 pilotlog.txt
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas   1372298 Oct 11 21:24 log.46676269._061051.job.log.1
[2025-10-11 21:24:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:24 boinc_mmap_file
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas       357 Oct 11 21:24 output.list
[2025-10-11 21:24:14] -rw-r--r--. 1 boincer umatlas       620 Oct 11 21:24 runtime_log
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas   1802240 Oct 11 21:24 result.tar.gz
[2025-10-11 21:24:14] -rw-r--r--. 1 boincer umatlas      8703 Oct 11 21:24 runtime_log.err
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas       653 Oct 11 21:24 DkiNDmodrR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdxgNDm6hssTm.diag
[2025-10-11 21:24:14] -rw-r--r--. 1 boincer umatlas     20984 Oct 11 21:24 stderr.txt
[2025-10-11 21:24:14] HITS file was successfully produced:
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas 194634228 Oct 11 21:22 shared/HITS.pool.root.1
[2025-10-11 21:24:14]  *** Contents of shared directory: ***
[2025-10-11 21:24:14] total 408352
[2025-10-11 21:24:14] -rw-r--r--. 2 boincer umatlas 221118183 Oct 11 18:37 ATLAS.root_0
[2025-10-11 21:24:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 18:37 start_atlas.sh
[2025-10-11 21:24:14] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 18:37 input.tar.gz
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas 194634228 Oct 11 21:22 HITS.pool.root.1
[2025-10-11 21:24:14] -rw-------. 1 boincer umatlas   1802240 Oct 11 21:24 result.tar.gz
21:24:35 (715170): run_atlas exited; CPU time 51454.276237
21:24:35 (715170): called boinc_finish(0)

</stderr_txt>
]]>

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