Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:12:37 (2116729): wrapper (7.7.26015): starting
06:12:37 (2116729): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 06:12:37] Arguments: --nthreads 2
[2025-10-12 06:12:37] Threads: 2
[2025-10-12 06:12:37] Checking for CVMFS
[2025-10-12 06:12:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:12:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:12:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:12:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:12:38] 2.9.2.0 1187580 3881 59436 151607 1 56 26784781 36864000 0 130560 0 2442967 99.989 130253 1022 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 06:12:38] CVMFS is ok
[2025-10-12 06:12:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:12:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:12:38] Further information can be found at the LHC@home message board.
[2025-10-12 06:12:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:12:38] Checking for apptainer binary...
[2025-10-12 06:12:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:12:38] Running /usr/bin/apptainer --version
[2025-10-12 06:12:38] apptainer version 1.4.1-1.1
[2025-10-12 06:12:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:12:38] thA314b
[2025-10-12 06:12:38] apptainer works
[2025-10-12 06:12:38] Set ATHENA_PROC_NUMBER=2
[2025-10-12 06:12:38] Set ATHENA_CORE_NUMBER=2
[2025-10-12 06:12:38] Starting ATLAS job with PandaID=6838452427
[2025-10-12 06:12:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:16:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:16:09] 2025-10-12 06:15:32,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:16:09] 2025-10-12 06:15:32,948 | INFO     | all data control threads have been joined
[2025-10-12 08:16:09] 2025-10-12 06:15:33,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:16:09] 2025-10-12 06:15:33,299 | INFO     | aborting loop
[2025-10-12 08:16:09] 2025-10-12 06:15:33,469 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:33,470 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:33,492 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:16:09] 2025-10-12 06:15:33,628 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:33,802 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:33,806 | INFO     | [job] validate thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:33,829 | INFO     | all payload control threads have been joined
[2025-10-12 08:16:09] 2025-10-12 06:15:33,935 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:33,954 | INFO     | [data] control thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:34,092 | INFO     | all job control threads have been joined
[2025-10-12 08:16:09] 2025-10-12 06:15:34,144 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:34,182 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:34,305 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:34,305 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:34,470 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:34,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:34,832 | INFO     | [payload] control thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:35,098 | INFO     | [job] control thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:15:37,496 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:16:09] 2025-10-12 06:16:02,627 | INFO     | PID=2120434 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:16:09] 2025-10-12 06:16:02,627 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:16:09] 2025-10-12 06:16:02,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:16:09] 2025-10-12 06:16:02,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:16:09] 2025-10-12 06:16:02,864 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:16:09] 2025-10-12 06:16:04,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140387293984576)>', '<ExcThread(monitor, started 140386928400128)>']
[2025-10-12 08:16:09] 2025-10-12 06:16:04,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:16:09] 2025-10-12 06:16:04,638 | INFO     | [monitor] control thread has ended
[2025-10-12 08:16:09] 2025-10-12 06:16:09,444 | INFO     | all workflow threads have been joined
[2025-10-12 08:16:09] 2025-10-12 06:16:09,444 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:16:09] 2025-10-12 06:16:09,445 | INFO     | traces error code: 0
[2025-10-12 08:16:09] 2025-10-12 06:16:09,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:16:09] 2025-10-12 06:16:09,487 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:16:09] 2025-10-12 06:16:09,490 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:16:09] 2025-10-12 06:16:09,492 [wrapper] pilotpid: 2120434
[2025-10-12 08:16:09] 2025-10-12 06:16:09,494 [wrapper] Pilot exit status: 0
[2025-10-12 08:16:09] 2025-10-12 06:16:09,500 [wrapper] pandaids: 6838452427
[2025-10-12 08:16:09] 2025-10-12 06:16:09,512 [wrapper] cleanup supervisor_pilot 2140895 2120435
[2025-10-12 08:16:09] 2025-10-12 06:16:09,514 [wrapper] Test setup, not cleaning
[2025-10-12 08:16:09] 2025-10-12 06:16:09,516 [wrapper] apfmon messages muted
[2025-10-12 08:16:09] 2025-10-12 06:16:09,518 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:16:09] 2025-10-12 06:16:09,520 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:16:09]  *** Error codes and diagnostics ***
[2025-10-12 08:16:09]     "exeErrorCode": 0,
[2025-10-12 08:16:09]     "exeErrorDiag": "",
[2025-10-12 08:16:09]     "pilotErrorCode": 0,
[2025-10-12 08:16:09]     "pilotErrorDiag": "",
[2025-10-12 08:16:09]  *** Listing of results directory ***
[2025-10-12 08:16:09] total 410076
[2025-10-12 08:16:09] -rw-r--r-- 1 boinc boinc    557409 Oct 11 15:40 pilot3.tar.gz
[2025-10-12 08:16:09] -rwx------ 1 boinc boinc     36292 Oct 11 15:41 runpilot2-wrapper.sh
[2025-10-12 08:16:09] -rw-r--r-- 1 boinc boinc      5112 Oct 11 15:41 queuedata.json
[2025-10-12 08:16:09] -rw-r--r-- 1 boinc boinc       100 Oct 12 06:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:16:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 06:12 run_atlas
[2025-10-12 08:16:09] -rw-r--r-- 1 boinc boinc       105 Oct 12 06:12 job.xml
[2025-10-12 08:16:09] -rw-r--r-- 2 boinc boinc 219134399 Oct 12 06:12 EVNT.46676267._002344.pool.root.1
[2025-10-12 08:16:09] -rw-r--r-- 2 boinc boinc    569674 Oct 12 06:12 input.tar.gz
[2025-10-12 08:16:09] -rw-r--r-- 2 boinc boinc     15120 Oct 12 06:12 start_atlas.sh
[2025-10-12 08:16:09] drwxrwx--x 2 boinc boinc      4096 Oct 12 06:12 shared
[2025-10-12 08:16:09] -rw-r--r-- 1 boinc boinc         0 Oct 12 06:12 boinc_setup_complete
[2025-10-12 08:16:09] -rw-r--r-- 1 boinc boinc      6207 Oct 12 06:12 init_data.xml
[2025-10-12 08:16:09] -rw-r--r-- 1 boinc boinc         0 Oct 12 06:12 boinc_lockfile
[2025-10-12 08:16:09] -rw-r--r-- 1 boinc boinc      2550 Oct 12 06:12 pandaJob.out
[2025-10-12 08:16:09] -rw------- 1 boinc boinc    975512 Oct 12 06:12 agis_schedconf.cvmfs.json
[2025-10-12 08:16:09] -rw------- 1 boinc boinc   1560580 Oct 12 06:12 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:16:09] drwx------ 5 boinc boinc      4096 Oct 12 06:12 pilot3
[2025-10-12 08:16:09] -rw------- 1 boinc boinc 194232388 Oct 12 08:15 HITS.46676269._058455.pool.root.1
[2025-10-12 08:16:09] -rw-r--r-- 1 boinc boinc       529 Oct 12 08:15 boinc_task_state.xml
[2025-10-12 08:16:09] -rw------- 1 boinc boinc      1017 Oct 12 08:15 memory_monitor_summary.json
[2025-10-12 08:16:09] -rw------- 1 boinc boinc    266789 Oct 12 08:15 log.46676269._058455.job.log.tgz.1
[2025-10-12 08:16:09] -rw------- 1 boinc boinc        95 Oct 12 08:15 pilot_heartbeat.json
[2025-10-12 08:16:09] -rw------- 1 boinc boinc      7758 Oct 12 08:15 heartbeat.json
[2025-10-12 08:16:09] -rw-r--r-- 1 boinc boinc      8192 Oct 12 08:15 boinc_mmap_file
[2025-10-12 08:16:09] -rw-r--r-- 1 boinc boinc        27 Oct 12 08:15 wrapper_checkpoint.txt
[2025-10-12 08:16:09] -rw------- 1 boinc boinc      4752 Oct 12 08:16 pilotlog.txt
[2025-10-12 08:16:09] -rw------- 1 boinc boinc   1060416 Oct 12 08:16 log.46676269._058455.job.log.1
[2025-10-12 08:16:09] -rw------- 1 boinc boinc       357 Oct 12 08:16 output.list
[2025-10-12 08:16:09] -rw-r--r-- 1 boinc boinc       620 Oct 12 08:16 runtime_log
[2025-10-12 08:16:09] -rw------- 1 boinc boinc   1351680 Oct 12 08:16 result.tar.gz
[2025-10-12 08:16:09] -rw-r--r-- 1 boinc boinc      8782 Oct 12 08:16 runtime_log.err
[2025-10-12 08:16:09] -rw------- 1 boinc boinc       661 Oct 12 08:16 EKWMDmC2oR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmzRMDmtBLPWo.diag
[2025-10-12 08:16:09] -rw-r--r-- 1 boinc boinc      7067 Oct 12 08:16 stderr.txt
[2025-10-12 08:16:09] HITS file was successfully produced:
[2025-10-12 08:16:09] -rw------- 1 boinc boinc 194232388 Oct 12 08:15 shared/HITS.pool.root.1
[2025-10-12 08:16:09]  *** Contents of shared directory: ***
[2025-10-12 08:16:09] total 405588
[2025-10-12 08:16:09] -rw-r--r-- 2 boinc boinc 219134399 Oct 12 06:12 ATLAS.root_0
[2025-10-12 08:16:09] -rw-r--r-- 2 boinc boinc    569674 Oct 12 06:12 input.tar.gz
[2025-10-12 08:16:09] -rw-r--r-- 2 boinc boinc     15120 Oct 12 06:12 start_atlas.sh
[2025-10-12 08:16:09] -rw------- 1 boinc boinc 194232388 Oct 12 08:15 HITS.pool.root.1
[2025-10-12 08:16:09] -rw------- 1 boinc boinc   1351680 Oct 12 08:16 result.tar.gz
08:16:11 (2116729): run_atlas exited; CPU time 14311.281125
08:16:11 (2116729): called boinc_finish(0)

</stderr_txt>
]]>

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