Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:50:46 (2174789): wrapper (7.7.26015): starting
14:50:46 (2174789): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 14:50:46] Arguments: --nthreads 8
[2025-10-11 14:50:46] Threads: 8
[2025-10-11 14:50:46] Checking for CVMFS
[2025-10-11 14:50:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:50:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:50:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:50:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:50:47] 2.13.2.0 3269412 34669 389188 151593 3 758 24947764 40960000 44879 16776704 0 440804221 99.841 182585919 36837 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 14:50:47] CVMFS is ok
[2025-10-11 14:50:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:50:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:50:47] Further information can be found at the LHC@home message board.
[2025-10-11 14:50:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:50:47] Checking for apptainer binary...
[2025-10-11 14:50:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:50:47] Running /usr/bin/apptainer --version
[2025-10-11 14:50:47] apptainer version 1.4.3-1.el9
[2025-10-11 14:50:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:50:47] c8-16-2.aglt2.org
[2025-10-11 14:50:47] apptainer works
[2025-10-11 14:50:48] Set ATHENA_PROC_NUMBER=8
[2025-10-11 14:50:48] Set ATHENA_CORE_NUMBER=8
[2025-10-11 14:50:48] Starting ATLAS job with PandaID=6838363800
[2025-10-11 14:50:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:57:23]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:57:23] 2025-10-11 19:56:06,928 | INFO     | time since job start (3895s) is within the limit (172800.0s)
[2025-10-11 15:57:23] 2025-10-11 19:56:07,313 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 15:57:23] 2025-10-11 19:56:07,643 | WARNING  | process 2189031 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 15:57:23] 2025-10-11 19:56:07,643 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838363800/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:57:23] 2025-10-11 19:56:08,401 | INFO     | number of running child processes to parent process 2189031: 1
[2025-10-11 15:57:23] 2025-10-11 19:56:08,401 | INFO     | maximum number of monitored processes: 6
[2025-10-11 15:57:23] 2025-10-11 19:56:08,935 | INFO     | time since job start (3897s) is within the limit (172800.0s)
[2025-10-11 15:57:23] 2025-10-11 19:56:09,870 | INFO     | job 6838363800 has state=finished
[2025-10-11 15:57:23] 2025-10-11 19:56:09,870 | INFO     | preparing for final server update for job 6838363800 in state='finished'
[2025-10-11 15:57:23] 2025-10-11 19:56:09,871 | INFO     | this job has now completed (state=finished)
[2025-10-11 15:57:23] 2025-10-11 19:56:09,871 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 15:57:23] 2025-10-11 19:56:09,871 | INFO     | log transfer has been attempted: DONE
[2025-10-11 15:57:23] 2025-10-11 19:56:09,871 | INFO     | job 6838363800 has finished - writing final server update
[2025-10-11 15:57:23] 2025-10-11 19:56:09,871 | INFO     | total number of processed events: 400 (read)
[2025-10-11 15:57:23] 2025-10-11 19:56:09,874 | INFO     | executing command: lscpu
[2025-10-11 15:57:23] 2025-10-11 19:56:09,966 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 15:57:23] 2025-10-11 19:56:10,907 | INFO     | monitor loop #252: job 0:6838363800 is in state 'finished'
[2025-10-11 15:57:23] 2025-10-11 19:56:10,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:57:23] 2025-10-11 19:56:10,941 | INFO     | time since job start (3899s) is within the limit (172800.0s)
[2025-10-11 15:57:23] 2025-10-11 19:56:12,956 | INFO     | time since job start (3901s) is within the limit (172800.0s)
[2025-10-11 15:57:23] 2025-10-11 19:56:13,415 | INFO     | monitor loop #253: job 0:6838363800 is in state 'finished'
[2025-10-11 15:57:23] 2025-10-11 19:56:13,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:57:23] 2025-10-11 19:56:14,964 | INFO     | time since job start (3903s) is within the limit (172800.0s)
[2025-10-11 15:57:23] 2025-10-11 19:56:15,920 | INFO     | monitor loop #254: job 0:6838363800 is in state 'finished'
[2025-10-11 15:57:23] 2025-10-11 19:56:15,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:57:23] 2025-10-11 19:56:16,971 | INFO     | time since job start (3905s) is within the limit (172800.0s)
[2025-10-11 15:57:23] 2025-10-11 19:56:18,428 | INFO     | monitor loop #255: job 0:6838363800 is in state 'finished'
[2025-10-11 15:57:23] 2025-10-11 19:56:18,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:57:23] 2025-10-11 19:56:18,977 | INFO     | time since job start (3907s) is within the limit (172800.0s)
[2025-10-11 15:57:23] 2025-10-11 19:56:20,935 | INFO     | monitor loop #256: job 0:6838363800 is in state 'finished'
[2025-10-11 15:57:23] 2025-10-11 19:56:20,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:57:23] 2025-10-11 19:56:20,993 | INFO     | time since job start (3909s) is within the limit (172800.0s)
[2025-10-11 15:57:23] 2025-10-11 19:56:23,017 | INFO     | time since job start (3912s) is within the limit (172800.0s)
[2025-10-11 15:57:23] 2025-10-11 19:56:23,440 | INFO     | monitor loop #257: job 0:6838363800 is in state 'finished'
[2025-10-11 15:57:23] 2025-10-11 19:56:23,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:57:23] 2025-10-11 19:56:24,483 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 15:57:23] 2025-10-11 19:56:24,493 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.989999999994
[2025-10-11 15:57:23] 2025-10-11 19:56:24,507 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838363800/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:57:23] 2025-10-11 19:56:24,507 | INFO     | extracted standard info from prmon json
[2025-10-11 15:57:23] 2025-10-11 19:56:24,507 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 15:57:23] 2025-10-11 19:56:24,507 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 15:57:23] 2025-10-11 19:56:24,508 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:57:23] 2025-10-11 19:56:24,508 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:57:23] 2025-10-11 19:56:24,509 | INFO     | fitting pss+swap vs Time
[2025-10-11 15:57:23] 2025-10-11 19:56:24,509 | INFO     | sum of square deviations: 57407588.0
[2025-10-11 15:57:23] 2025-10-11 19:56:24,509 | INFO     | sum of deviations: 157157777.0
[2025-10-11 15:57:23] 2025-10-11 19:56:24,509 | INFO     | mean x: 1760210728.0
[2025-10-11 15:57:23] 2025-10-11 19:56:24,509 | INFO     | mean y: 2160572.298245614
[2025-10-11 15:57:23] 2025-10-11 19:56:24,509 | INFO     | -- intersect: -4816554421.685331
[2025-10-11 15:57:23] 2025-10-11 19:56:24,509 | INFO     | intersect: -4816554421.685331
[2025-10-11 15:57:23] 2025-10-11 19:56:24,509 | INFO     | chi2: 0.016820170803699606
[2025-10-11 15:57:23] 2025-10-11 19:56:24,509 | INFO     | -- intersect: -4816554421.685331
[2025-10-11 15:57:23] 2025-10-11 19:56:24,509 | INFO     | current memory leak: 2.74 B/s (using 57 data points, chi2=0.02)
[2025-10-11 15:57:23] 2025-10-11 19:56:24,510 | INFO     | could have reported an average CPU frequency of 3795 MHz (6 samples)
[2025-10-11 15:57:23] 2025-10-11 19:56:24,510 | INFO     | ..............................
[2025-10-11 15:57:23] 2025-10-11 19:56:24,510 | INFO     | . Timing measurements:
[2025-10-11 15:57:23] 2025-10-11 19:56:24,510 | INFO     | . get job = 0 s
[2025-10-11 15:57:23] 2025-10-11 19:56:24,510 | INFO     | . initial setup = 3 s
[2025-10-11 15:57:23] 2025-10-11 19:56:24,510 | INFO     | . payload setup = 13 s
[2025-10-11 15:57:23] 2025-10-11 19:56:24,510 | INFO     | . stage-in = 0 s
[2025-10-11 15:57:23] 2025-10-11 19:56:24,510 | INFO     | . payload execution = 3852 s
[2025-10-11 15:57:23] 2025-10-11 19:56:24,510 | INFO     | . stage-out = 1 s
[2025-10-11 15:57:23] 2025-10-11 19:56:24,510 | INFO     | . log creation = 0 s
[2025-10-11 15:57:23] 2025-10-11 19:56:24,510 | INFO     | ..............................
[2025-10-11 15:57:23] 2025-10-11 19:56:24,567 | INFO     | 
[2025-10-11 15:57:23] 2025-10-11 19:56:24,567 | INFO     | job summary report
[2025-10-11 15:57:23] 2025-10-11 19:56:24,567 | INFO     | --------------------------------------------------
[2025-10-11 15:57:23] 2025-10-11 19:56:24,567 | INFO     | PanDA job id: 6838363800
[2025-10-11 15:57:23] 2025-10-11 19:56:24,567 | INFO     | task id: 46676269
[2025-10-11 15:57:23] 2025-10-11 19:56:24,567 | INFO     | errors: (none)
[2025-10-11 15:57:23] 2025-10-11 19:56:24,567 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | pilot state: finished 
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | transexitcode: 0
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | exeerrorcode: 0
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | exeerrordiag: 
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | exitcode: 0
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | exitmsg: OK
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | cpuconsumptiontime: 22461 s
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | nevents: 400
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | neventsw: 0
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | pid: 2189031
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | pgrp: 2189031
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | corecount: 8
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | event service: False
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | sizes: {0: 2348686, 1: 2348885, 11: 2349175, 3870: 2375105, 3872: 2384103, 3874: 2384159, 3892: 2384481}
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | --------------------------------------------------
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | 
[2025-10-11 15:57:23] 2025-10-11 19:56:24,568 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 15:57:23] 2025-10-11 19:56:24,585 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,585 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,585 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,585 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,585 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,586 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,586 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,586 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:57:23] 2025-10-11 19:56:24,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,586 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:57:23] 2025-10-11 19:56:24,586 | INFO     | job 6838363800 has completed (purged errors)
[2025-10-11 15:57:23] 2025-10-11 19:56:24,586 | INFO     | overall cleanup function is called
[2025-10-11 15:57:23] 2025-10-11 19:56:25,594 | INFO     | --- collectZombieJob: --- 10, [2189031]
[2025-10-11 15:57:23] 2025-10-11 19:56:25,594 | INFO     | zombie collector waiting for pid 2189031
[2025-10-11 15:57:23] 2025-10-11 19:56:25,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:57:23] 2025-10-11 19:56:25,594 | INFO     | collected zombie processes
[2025-10-11 15:57:23] 2025-10-11 19:56:25,594 | INFO     | will attempt to kill all subprocesses of pid=2189031
[2025-10-11 15:57:23] 2025-10-11 19:56:26,284 | INFO     | process IDs to be killed: [2189031] (in reverse order)
[2025-10-11 15:57:23] 2025-10-11 19:56:26,544 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:57:23] 2025-10-11 19:56:26,544 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:57:23] 2025-10-11 19:56:26,581 | INFO     | did not find any defunct processes belonging to 2189031
[2025-10-11 15:57:23] 2025-10-11 19:56:26,616 | INFO     | did not find any defunct processes belonging to 2189031
[2025-10-11 15:57:23] 2025-10-11 19:56:26,617 | INFO     | ready for new job
[2025-10-11 15:57:23] 2025-10-11 19:56:26,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:57:23] 2025-10-11 19:56:26,618 | INFO     | ***************************************
[2025-10-11 15:57:23] 2025-10-11 19:56:26,618 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:57:23] 2025-10-11 19:56:26,618 | INFO     | ***************************************
[2025-10-11 15:57:23] 2025-10-11 19:56:26,618 | INFO     | 
[2025-10-11 15:57:23] 2025-10-11 19:56:26,623 | INFO     | architecture information:
[2025-10-11 15:57:23] 2025-10-11 19:56:26,623 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:57:23] 2025-10-11 19:56:26,646 | INFO     | cat /etc/os-release:
[2025-10-11 15:57:23] NAME="CentOS Linux"
[2025-10-11 15:57:23] VERSION="7 (Core)"
[2025-10-11 15:57:23] ID="centos"
[2025-10-11 15:57:23] ID_LIKE="rhel fedora"
[2025-10-11 15:57:23] VERSION_ID="7"
[2025-10-11 15:57:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:57:23] ANSI_COLOR="0;31"
[2025-10-11 15:57:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:57:23] HOME_URL="https://www.centos.org/"
[2025-10-11 15:57:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:57:23] 
[2025-10-11 15:57:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:57:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:57:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:57:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:57:23] 
[2025-10-11 15:57:23] 2025-10-11 19:56:26,647 | INFO     | ***************************************
[2025-10-11 15:57:23] 2025-10-11 19:56:27,149 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 15:57:23] 2025-10-11 19:56:27,198 | INFO     | sufficient remaining disk space (166427885568 B)
[2025-10-11 15:57:23] 2025-10-11 19:56:27,198 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:57:23] 2025-10-11 19:56:27,199 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:57:23] 2025-10-11 19:56:27,199 | INFO     | update_server=False
[2025-10-11 15:57:23] 2025-10-11 19:56:27,199 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:57:23] 2025-10-11 19:56:27,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:57:23] 2025-10-11 19:56:27,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:57:23] 2025-10-11 19:56:27,199 | INFO     | aborting loop
[2025-10-11 15:57:23] 2025-10-11 19:56:27,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:57:23] 2025-10-11 19:56:27,607 | INFO     | all payload control threads have been joined
[2025-10-11 15:57:23] 2025-10-11 19:56:28,031 | INFO     | all data control threads have been joined
[2025-10-11 15:57:23] 2025-10-11 19:56:28,204 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:28,205 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:28,301 | INFO     | all job control threads have been joined
[2025-10-11 15:57:23] 2025-10-11 19:56:28,484 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:28,612 | INFO     | [payload] control thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:29,027 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:29,040 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:29,040 | INFO     | [data] control thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:29,189 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:29,248 | INFO     | [job] validate thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:29,306 | INFO     | [job] control thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:29,509 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:29,543 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:29,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:57:23] 2025-10-11 19:56:29,721 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:30,589 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:31,208 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:37,282 | INFO     | job.realtimelogging is not enabled
[2025-10-11 15:57:23] 2025-10-11 19:56:38,287 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:57:23] 2025-10-11 19:56:56,890 | INFO     | PID=2179329 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:57:23] 2025-10-11 19:56:56,890 | INFO     | .. there are 70 such processes running
[2025-10-11 15:57:23] 2025-10-11 19:56:56,890 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:57:23] 2025-10-11 19:56:56,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:57:23] 2025-10-11 19:56:56,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:57:23] 2025-10-11 19:57:17,252 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:57:23] 2025-10-11 19:57:17,585 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140422704441152)>', '<ExcThread(monitor, started 140422059906816)>']
[2025-10-11 15:57:23] 2025-10-11 19:57:18,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:57:23] 2025-10-11 19:57:18,012 | INFO     | [monitor] control thread has ended
[2025-10-11 15:57:23] 2025-10-11 19:57:22,610 | INFO     | all workflow threads have been joined
[2025-10-11 15:57:23] 2025-10-11 19:57:22,610 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:57:23] 2025-10-11 19:57:22,610 | INFO     | traces error code: 0
[2025-10-11 15:57:23] 2025-10-11 19:57:22,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:57:23] 2025-10-11 19:57:22,756 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:57:23] 2025-10-11 19:57:22,758 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:57:23] 2025-10-11 19:57:22,763 [wrapper] pilotpid: 2179329
[2025-10-11 15:57:23] 2025-10-11 19:57:22,765 [wrapper] Pilot exit status: 0
[2025-10-11 15:57:23] 2025-10-11 19:57:22,776 [wrapper] pandaids: 6838363800
[2025-10-11 15:57:23] 2025-10-11 19:57:22,936 [wrapper] cleanup supervisor_pilot 2855498 2179330
[2025-10-11 15:57:23] 2025-10-11 19:57:22,938 [wrapper] Test setup, not cleaning
[2025-10-11 15:57:23] 2025-10-11 19:57:22,939 [wrapper] apfmon messages muted
[2025-10-11 15:57:23] 2025-10-11 19:57:22,941 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:57:23] 2025-10-11 19:57:22,943 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:57:23]  *** Error codes and diagnostics ***
[2025-10-11 15:57:23]     "exeErrorCode": 0,
[2025-10-11 15:57:23]     "exeErrorDiag": "",
[2025-10-11 15:57:23]     "pilotErrorCode": 0,
[2025-10-11 15:57:23]     "pilotErrorDiag": "",
[2025-10-11 15:57:23]  *** Listing of results directory ***
[2025-10-11 15:57:23] total 416680
[2025-10-11 15:57:23] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 06:50 queuedata.json
[2025-10-11 15:57:23] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 06:50 pilot3.tar.gz
[2025-10-11 15:57:23] -rwx------. 1 boincer umatlas     36292 Oct 11 06:51 runpilot2-wrapper.sh
[2025-10-11 15:57:23] -rw-r--r--. 1 boincer umatlas       100 Oct 11 14:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:57:23] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 14:50 run_atlas
[2025-10-11 15:57:23] -rw-r--r--. 1 boincer umatlas       105 Oct 11 14:50 job.xml
[2025-10-11 15:57:23] -rw-r--r--. 2 boincer umatlas 223416883 Oct 11 14:50 EVNT.46676267._002280.pool.root.1
[2025-10-11 15:57:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 14:50 start_atlas.sh
[2025-10-11 15:57:23] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 14:50 shared
[2025-10-11 15:57:23] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 14:50 input.tar.gz
[2025-10-11 15:57:23] -rw-r--r--. 1 boincer umatlas         0 Oct 11 14:50 boinc_lockfile
[2025-10-11 15:57:23] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 14:50 pandaJob.out
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas    975520 Oct 11 14:51 agis_schedconf.cvmfs.json
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas   1560580 Oct 11 14:51 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:57:23] drwx------. 5 boincer umatlas      4096 Oct 11 14:51 pilot3
[2025-10-11 15:57:23] -rw-r--r--. 1 boincer umatlas      7161 Oct 11 15:48 init_data.xml
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas 197628014 Oct 11 15:55 HITS.46676269._056296.pool.root.1
[2025-10-11 15:57:23] -rw-r--r--. 1 boincer umatlas       530 Oct 11 15:55 boinc_task_state.xml
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas      1034 Oct 11 15:55 memory_monitor_summary.json
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas    316020 Oct 11 15:56 log.46676269._056296.job.log.tgz.1
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas        95 Oct 11 15:56 pilot_heartbeat.json
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas      7774 Oct 11 15:56 heartbeat.json
[2025-10-11 15:57:23] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 15:57 boinc_mmap_file
[2025-10-11 15:57:23] -rw-r--r--. 1 boincer umatlas        27 Oct 11 15:57 wrapper_checkpoint.txt
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas      4897 Oct 11 15:57 pilotlog.txt
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas    547405 Oct 11 15:57 log.46676269._056296.job.log.1
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas       357 Oct 11 15:57 output.list
[2025-10-11 15:57:23] -rw-r--r--. 1 boincer umatlas       620 Oct 11 15:57 runtime_log
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas    880640 Oct 11 15:57 result.tar.gz
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas       651 Oct 11 15:57 wdgKDmANmR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmEgNDmQ3AFjm.diag
[2025-10-11 15:57:23] -rw-r--r--. 1 boincer umatlas      8698 Oct 11 15:57 runtime_log.err
[2025-10-11 15:57:23] -rw-r--r--. 1 boincer umatlas     22177 Oct 11 15:57 stderr.txt
[2025-10-11 15:57:23] HITS file was successfully produced:
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas 197628014 Oct 11 15:55 shared/HITS.pool.root.1
[2025-10-11 15:57:23]  *** Contents of shared directory: ***
[2025-10-11 15:57:23] total 412628
[2025-10-11 15:57:23] -rw-r--r--. 2 boincer umatlas 223416883 Oct 11 14:50 ATLAS.root_0
[2025-10-11 15:57:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 14:50 start_atlas.sh
[2025-10-11 15:57:23] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 14:50 input.tar.gz
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas 197628014 Oct 11 15:55 HITS.pool.root.1
[2025-10-11 15:57:23] -rw-------. 1 boincer umatlas    880640 Oct 11 15:57 result.tar.gz
15:57:25 (2174789): run_atlas exited; CPU time 22617.027933
15:57:25 (2174789): called boinc_finish(0)

</stderr_txt>
]]>

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