Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:13:35 (3525537): wrapper (7.7.26015): starting
02:13:35 (3525537): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 02:13:35] Arguments: --nthreads 4
[2025-10-13 02:13:35] Threads: 4
[2025-10-13 02:13:35] Checking for CVMFS
[2025-10-13 02:13:35] No cvmfs_config command found, will try listing directly
[2025-10-13 02:13:36] CVMFS is ok
[2025-10-13 02:13:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:13:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:13:36] Further information can be found at the LHC@home message board.
[2025-10-13 02:13:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:13:36] Checking for apptainer binary...
[2025-10-13 02:13:36] which: no apptainer in ((null))
[2025-10-13 02:13:36] apptainer is not installed, using version from CVMFS
[2025-10-13 02:13:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:13:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2025-10-13 02:13:36] apptainer works
[2025-10-13 02:13:36] Set ATHENA_PROC_NUMBER=4
[2025-10-13 02:13:36] Set ATHENA_CORE_NUMBER=4
[2025-10-13 02:13:36] Starting ATLAS job with PandaID=6838452364
[2025-10-13 02:13:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:39:46]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:39:46] 2025-10-13 03:36:08,403 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:39:46] 2025-10-13 03:36:08,403 | INFO     | sum of square deviations: 2443580700.0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,404 | INFO     | sum of deviations: 14010733394.0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,405 | INFO     | mean x: 1760320494.0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,405 | INFO     | mean y: 2337769.311557789
[2025-10-13 05:39:46] 2025-10-13 03:36:08,405 | INFO     | -- intersect: -10090793646.167528
[2025-10-13 05:39:46] 2025-10-13 03:36:08,405 | INFO     | intersect: -10090793646.167528
[2025-10-13 05:39:46] 2025-10-13 03:36:08,405 | INFO     | chi2: 2.1917439776759933
[2025-10-13 05:39:46] 2025-10-13 03:36:08,406 | INFO     | sum of square deviations: 2263977332.5
[2025-10-13 05:39:46] 2025-10-13 03:36:08,407 | INFO     | sum of deviations: 26244494881.0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,407 | INFO     | mean x: 1760320341.5
[2025-10-13 05:39:46] 2025-10-13 03:36:08,408 | INFO     | mean y: 2347937.2989690723
[2025-10-13 05:39:46] 2025-10-13 03:36:08,408 | INFO     | -- intersect: -20403650624.71045
[2025-10-13 05:39:46] 2025-10-13 03:36:08,408 | INFO     | intersect: -20403650624.71045
[2025-10-13 05:39:46] 2025-10-13 03:36:08,408 | INFO     | chi2: 1.3841208553142959
[2025-10-13 05:39:46] 2025-10-13 03:36:08,408 | INFO     | current chi2=1.3841208553142959 (change=36.84842438659543 %)
[2025-10-13 05:39:46] 2025-10-13 03:36:08,409 | INFO     | sum of square deviations: 2093397390.0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,410 | INFO     | sum of deviations: 25746393159.000004
[2025-10-13 05:39:46] 2025-10-13 03:36:08,410 | INFO     | mean x: 1760320189.0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,410 | INFO     | mean y: 2347492.7724867724
[2025-10-13 05:39:46] 2025-10-13 03:36:08,410 | INFO     | -- intersect: -21647577116.96403
[2025-10-13 05:39:46] 2025-10-13 03:36:08,411 | INFO     | intersect: -21647577116.96403
[2025-10-13 05:39:46] 2025-10-13 03:36:08,411 | INFO     | chi2: 1.384611481498894
[2025-10-13 05:39:46] 2025-10-13 03:36:08,411 | INFO     | current chi2=1.384611481498894 (change=-0.035446773503506335 %)
[2025-10-13 05:39:46] 2025-10-13 03:36:08,411 | INFO     | right removable region: 188
[2025-10-13 05:39:46] 2025-10-13 03:36:08,412 | INFO     | sum of square deviations: 2263977332.5
[2025-10-13 05:39:46] 2025-10-13 03:36:08,413 | INFO     | sum of deviations: -13093905041.0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,413 | INFO     | mean x: 1760320646.5
[2025-10-13 05:39:46] 2025-10-13 03:36:08,413 | INFO     | mean y: 2360513.2783505153
[2025-10-13 05:39:46] 2025-10-13 03:36:08,413 | INFO     | -- intersect: 10183324366.626793
[2025-10-13 05:39:46] 2025-10-13 03:36:08,414 | INFO     | intersect: 10183324366.626793
[2025-10-13 05:39:46] 2025-10-13 03:36:08,414 | INFO     | chi2: 0.8499740458744689
[2025-10-13 05:39:46] 2025-10-13 03:36:08,414 | INFO     | current chi2=0.8499740458744689 (change=61.21928224592475 %)
[2025-10-13 05:39:46] 2025-10-13 03:36:08,415 | INFO     | sum of square deviations: 2093397390.0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,416 | INFO     | sum of deviations: -15404956103.999998
[2025-10-13 05:39:46] 2025-10-13 03:36:08,416 | INFO     | mean x: 1760320799.0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,416 | INFO     | mean y: 2362553.4814814813
[2025-10-13 05:39:46] 2025-10-13 03:36:08,416 | INFO     | -- intersect: 12956264553.690435
[2025-10-13 05:39:46] 2025-10-13 03:36:08,416 | INFO     | intersect: 12956264553.690435
[2025-10-13 05:39:46] 2025-10-13 03:36:08,417 | INFO     | chi2: 0.8373321448667519
[2025-10-13 05:39:46] 2025-10-13 03:36:08,417 | INFO     | current chi2=0.8373321448667519 (change=1.4873278859604218 %)
[2025-10-13 05:39:46] 2025-10-13 03:36:08,417 | INFO     | left removable region: 20
[2025-10-13 05:39:46] 2025-10-13 03:36:08,417 | INFO     | sum of square deviations: 1470248962.0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,418 | INFO     | sum of deviations: -2884880411.5000005
[2025-10-13 05:39:46] 2025-10-13 03:36:08,419 | INFO     | mean x: 1760320768.5
[2025-10-13 05:39:46] 2025-10-13 03:36:08,419 | INFO     | mean y: 2374413.0773809524
[2025-10-13 05:39:46] 2025-10-13 03:36:08,419 | INFO     | -- intersect: 3456425416.857159
[2025-10-13 05:39:46] 2025-10-13 03:36:08,419 | INFO     | intersect: 3456425416.857159
[2025-10-13 05:39:46] 2025-10-13 03:36:08,419 | INFO     | chi2: 0.008874378161325533
[2025-10-13 05:39:46] 2025-10-13 03:36:08,419 | INFO     | -- intersect: 3456425416.857159
[2025-10-13 05:39:46] 2025-10-13 03:36:08,420 | INFO     | current memory leak: -1.96 B/s (using 168 data points, chi2=0.01)
[2025-10-13 05:39:46] 2025-10-13 03:36:08,420 | INFO     | could have reported an average CPU frequency of 2604 MHz (10 samples)
[2025-10-13 05:39:46] 2025-10-13 03:36:08,420 | INFO     | ..............................
[2025-10-13 05:39:46] 2025-10-13 03:36:08,420 | INFO     | . Timing measurements:
[2025-10-13 05:39:46] 2025-10-13 03:36:08,421 | INFO     | . get job = 0 s
[2025-10-13 05:39:46] 2025-10-13 03:36:08,421 | INFO     | . initial setup = 1 s
[2025-10-13 05:39:46] 2025-10-13 03:36:08,421 | INFO     | . payload setup = 5 s
[2025-10-13 05:39:46] 2025-10-13 03:36:08,421 | INFO     | . stage-in = 0 s
[2025-10-13 05:39:46] 2025-10-13 03:36:08,421 | INFO     | . payload execution = 12108 s
[2025-10-13 05:39:46] 2025-10-13 03:36:08,421 | INFO     | . stage-out = 1 s
[2025-10-13 05:39:46] 2025-10-13 03:36:08,421 | INFO     | . log creation = 0 s
[2025-10-13 05:39:46] 2025-10-13 03:36:08,421 | INFO     | ..............................
[2025-10-13 05:39:46] 2025-10-13 03:36:08,490 | INFO     | time since job start (12139s) is within the limit (172800.0s)
[2025-10-13 05:39:46] 2025-10-13 03:36:08,533 | INFO     | 
[2025-10-13 05:39:46] 2025-10-13 03:36:08,533 | INFO     | job summary report
[2025-10-13 05:39:46] 2025-10-13 03:36:08,533 | INFO     | --------------------------------------------------
[2025-10-13 05:39:46] 2025-10-13 03:36:08,534 | INFO     | PanDA job id: 6838452364
[2025-10-13 05:39:46] 2025-10-13 03:36:08,534 | INFO     | task id: 46676269
[2025-10-13 05:39:46] 2025-10-13 03:36:08,534 | INFO     | errors: (none)
[2025-10-13 05:39:46] 2025-10-13 03:36:08,534 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:39:46] 2025-10-13 03:36:08,534 | INFO     | pilot state: finished 
[2025-10-13 05:39:46] 2025-10-13 03:36:08,534 | INFO     | transexitcode: 0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,534 | INFO     | exeerrorcode: 0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,535 | INFO     | exeerrordiag: 
[2025-10-13 05:39:46] 2025-10-13 03:36:08,535 | INFO     | exitcode: 0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,535 | INFO     | exitmsg: OK
[2025-10-13 05:39:46] 2025-10-13 03:36:08,535 | INFO     | cpuconsumptiontime: 46659 s
[2025-10-13 05:39:46] 2025-10-13 03:36:08,535 | INFO     | nevents: 400
[2025-10-13 05:39:46] 2025-10-13 03:36:08,535 | INFO     | neventsw: 0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,535 | INFO     | pid: 3557805
[2025-10-13 05:39:46] 2025-10-13 03:36:08,535 | INFO     | pgrp: 3557805
[2025-10-13 05:39:46] 2025-10-13 03:36:08,536 | INFO     | corecount: 4
[2025-10-13 05:39:46] 2025-10-13 03:36:08,536 | INFO     | event service: False
[2025-10-13 05:39:46] 2025-10-13 03:36:08,536 | INFO     | sizes: {0: 2348641, 1: 2348896, 5: 2349158, 12: 2349214, 12118: 2378858, 12119: 2387878, 12120: 2388062, 12124: 2388256}
[2025-10-13 05:39:46] 2025-10-13 03:36:08,536 | INFO     | --------------------------------------------------
[2025-10-13 05:39:46] 2025-10-13 03:36:08,536 | INFO     | 
[2025-10-13 05:39:46] 2025-10-13 03:36:08,536 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-13 05:39:46] 2025-10-13 03:36:08,555 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,556 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,556 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,556 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,558 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:39:46] 2025-10-13 03:36:08,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,558 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:39:46] 2025-10-13 03:36:08,558 | INFO     | job 6838452364 has completed (purged errors)
[2025-10-13 05:39:46] 2025-10-13 03:36:08,558 | INFO     | overall cleanup function is called
[2025-10-13 05:39:46] 2025-10-13 03:36:09,566 | INFO     | --- collectZombieJob: --- 10, [3557805]
[2025-10-13 05:39:46] 2025-10-13 03:36:09,566 | INFO     | zombie collector waiting for pid 3557805
[2025-10-13 05:39:46] 2025-10-13 03:36:09,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:39:46] 2025-10-13 03:36:09,566 | INFO     | collected zombie processes
[2025-10-13 05:39:46] 2025-10-13 03:36:09,566 | INFO     | will attempt to kill all subprocesses of pid=3557805
[2025-10-13 05:39:46] 2025-10-13 03:36:10,340 | INFO     | PID=3537112 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 05:39:46] 2025-10-13 03:36:10,341 | INFO     | .. there are 2 such processes running
[2025-10-13 05:39:46] 2025-10-13 03:36:10,348 | INFO     | process IDs to be killed: [3557805] (in reverse order)
[2025-10-13 05:39:46] 2025-10-13 03:36:10,421 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:39:46] 2025-10-13 03:36:10,422 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:39:46] 2025-10-13 03:36:10,431 | INFO     | did not find any defunct processes belonging to 3557805
[2025-10-13 05:39:46] 2025-10-13 03:36:10,438 | INFO     | did not find any defunct processes belonging to 3557805
[2025-10-13 05:39:46] 2025-10-13 03:36:10,439 | INFO     | ready for new job
[2025-10-13 05:39:46] 2025-10-13 03:36:10,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:39:46] 2025-10-13 03:36:10,441 | INFO     | ***************************************
[2025-10-13 05:39:46] 2025-10-13 03:36:10,442 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:39:46] 2025-10-13 03:36:10,442 | INFO     | ***************************************
[2025-10-13 05:39:46] 2025-10-13 03:36:10,442 | INFO     | 
[2025-10-13 05:39:46] 2025-10-13 03:36:10,444 | INFO     | architecture information:
[2025-10-13 05:39:46] 2025-10-13 03:36:10,445 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:39:46] 2025-10-13 03:36:10,457 | INFO     | cat /etc/os-release:
[2025-10-13 05:39:46] NAME="CentOS Linux"
[2025-10-13 05:39:46] VERSION="7 (Core)"
[2025-10-13 05:39:46] ID="centos"
[2025-10-13 05:39:46] ID_LIKE="rhel fedora"
[2025-10-13 05:39:46] VERSION_ID="7"
[2025-10-13 05:39:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:39:46] ANSI_COLOR="0;31"
[2025-10-13 05:39:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:39:46] HOME_URL="https://www.centos.org/"
[2025-10-13 05:39:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:39:46] 
[2025-10-13 05:39:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:39:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:39:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:39:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:39:46] 
[2025-10-13 05:39:46] 2025-10-13 03:36:10,457 | INFO     | ***************************************
[2025-10-13 05:39:46] 2025-10-13 03:36:10,960 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-13 05:39:46] 2025-10-13 03:36:10,975 | INFO     | sufficient remaining disk space (1675763908608 B)
[2025-10-13 05:39:46] 2025-10-13 03:36:10,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:39:46] 2025-10-13 03:36:10,976 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:39:46] 2025-10-13 03:36:10,976 | INFO     | update_server=False
[2025-10-13 05:39:46] 2025-10-13 03:36:10,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:39:46] 2025-10-13 03:36:10,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:39:46] 2025-10-13 03:36:10,977 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 05:39:46] 2025-10-13 03:36:10,977 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:39:46] 2025-10-13 03:36:10,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:39:46] 2025-10-13 03:36:10,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:39:46] 2025-10-13 03:36:11,359 | INFO     | all data control threads have been joined
[2025-10-13 05:39:46] 2025-10-13 03:36:11,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:39:46] 2025-10-13 03:36:11,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:39:46] 2025-10-13 03:36:11,729 | INFO     | aborting loop
[2025-10-13 05:39:46] 2025-10-13 03:36:11,982 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:12,050 | INFO     | [job] validate thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:12,117 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:12,259 | INFO     | all job control threads have been joined
[2025-10-13 05:39:46] 2025-10-13 03:36:12,365 | INFO     | [data] control thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:12,432 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:12,461 | INFO     | all payload control threads have been joined
[2025-10-13 05:39:46] 2025-10-13 03:36:12,666 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:12,735 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:12,858 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:13,035 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:13,264 | INFO     | [job] control thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:13,403 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:13,467 | INFO     | [payload] control thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:13,493 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:13,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:39:46] 2025-10-13 03:36:14,548 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:14,983 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:36:21,717 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:39:46] 2025-10-13 03:36:22,722 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:39:46] 2025-10-13 03:37:07,895 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:39:46] 2025-10-13 03:37:09,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22955634808640)>', '<ExcThread(monitor, started 22955398498048)>']
[2025-10-13 05:39:46] 2025-10-13 03:37:10,258 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:39:46] 2025-10-13 03:37:10,258 | INFO     | [monitor] control thread has ended
[2025-10-13 05:39:46] 2025-10-13 03:37:14,833 | INFO     | all workflow threads have been joined
[2025-10-13 05:39:46] 2025-10-13 03:37:14,834 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:39:46] 2025-10-13 03:37:14,834 | INFO     | traces error code: 0
[2025-10-13 05:39:46] 2025-10-13 03:37:14,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:39:46] 2025-10-13 03:37:14,939 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:39:46] 2025-10-13 03:37:14,941 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:39:46] 2025-10-13 03:37:14,943 [wrapper] pilotpid: 3537112
[2025-10-13 05:39:46] 2025-10-13 03:37:14,946 [wrapper] Pilot exit status: 0
[2025-10-13 05:39:46] 2025-10-13 03:37:14,953 [wrapper] pandaids: 6838452364
[2025-10-13 05:39:46] 2025-10-13 03:37:15,001 [wrapper] cleanup supervisor_pilot 3688609 3537114
[2025-10-13 05:39:46] 2025-10-13 03:37:15,003 [wrapper] Test setup, not cleaning
[2025-10-13 05:39:46] 2025-10-13 03:37:15,006 [wrapper] apfmon messages muted
[2025-10-13 05:39:46] 2025-10-13 03:37:15,008 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:39:46] 2025-10-13 03:37:15,010 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:39:46]  *** Error codes and diagnostics ***
[2025-10-13 05:39:46]     "exeErrorCode": 0,
[2025-10-13 05:39:46]     "exeErrorDiag": "",
[2025-10-13 05:39:46]     "pilotErrorCode": 0,
[2025-10-13 05:39:46]     "pilotErrorDiag": "",
[2025-10-13 05:39:46]  *** Listing of results directory ***
[2025-10-13 05:39:46] total 407460
[2025-10-13 05:39:46] -rw-r--r-- 1 boinc boinc    557409 Oct 11 14:51 pilot3.tar.gz
[2025-10-13 05:39:46] -rw-r--r-- 1 boinc boinc      5112 Oct 11 15:37 queuedata.json
[2025-10-13 05:39:46] -rwx------ 1 boinc boinc     36292 Oct 11 15:37 runpilot2-wrapper.sh
[2025-10-13 05:39:46] -rw-r--r-- 1 boinc boinc       100 Oct 13 02:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:39:46] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 02:13 run_atlas
[2025-10-13 05:39:46] -rw-r--r-- 1 boinc boinc       105 Oct 13 02:13 job.xml
[2025-10-13 05:39:46] -rw-r--r-- 1 boinc boinc      6421 Oct 13 02:13 init_data.xml
[2025-10-13 05:39:46] -rw-r--r-- 2 boinc boinc 220016993 Oct 13 02:13 EVNT.46676267._002341.pool.root.1
[2025-10-13 05:39:46] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:13 start_atlas.sh
[2025-10-13 05:39:46] drwxrwx--x 2 boinc boinc      4096 Oct 13 02:13 shared
[2025-10-13 05:39:46] -rw-r--r-- 2 boinc boinc    569678 Oct 13 02:13 input.tar.gz
[2025-10-13 05:39:46] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:13 boinc_lockfile
[2025-10-13 05:39:46] -rw-r--r-- 1 boinc boinc      2550 Oct 13 02:13 pandaJob.out
[2025-10-13 05:39:46] -rw------- 1 boinc boinc    975603 Oct 13 02:13 agis_schedconf.cvmfs.json
[2025-10-13 05:39:46] drwx------ 5 boinc boinc      4096 Oct 13 02:13 pilot3
[2025-10-13 05:39:46] -rw------- 1 boinc boinc 189068540 Oct 13 05:35 HITS.46676269._058392.pool.root.1
[2025-10-13 05:39:46] -rw-r--r-- 1 boinc boinc       527 Oct 13 05:35 boinc_task_state.xml
[2025-10-13 05:39:46] -rw------- 1 boinc boinc      1031 Oct 13 05:35 memory_monitor_summary.json
[2025-10-13 05:39:46] -rw------- 1 boinc boinc   1560580 Oct 13 05:36 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:39:46] -rw------- 1 boinc boinc    385204 Oct 13 05:36 log.46676269._058392.job.log.tgz.1
[2025-10-13 05:39:46] -rw------- 1 boinc boinc        95 Oct 13 05:36 pilot_heartbeat.json
[2025-10-13 05:39:46] -rw------- 1 boinc boinc      7833 Oct 13 05:36 heartbeat.json
[2025-10-13 05:39:46] -rw------- 1 boinc boinc      4635 Oct 13 05:37 pilotlog.txt
[2025-10-13 05:39:46] -rw------- 1 boinc boinc   1734719 Oct 13 05:37 log.46676269._058392.job.log.1
[2025-10-13 05:39:46] -rw------- 1 boinc boinc       357 Oct 13 05:37 output.list
[2025-10-13 05:39:46] -rw-r--r-- 1 boinc boinc       620 Oct 13 05:37 runtime_log
[2025-10-13 05:39:46] -rw------- 1 boinc boinc   2140160 Oct 13 05:37 result.tar.gz
[2025-10-13 05:39:46] -rw-r--r-- 1 boinc boinc      9070 Oct 13 05:37 runtime_log.err
[2025-10-13 05:39:46] -rw------- 1 boinc boinc       666 Oct 13 05:37 CkTLDm9xoR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvWgNDmk8NG4m.diag
[2025-10-13 05:39:46] -rw-r--r-- 1 boinc boinc        25 Oct 13 05:39 wrapper_checkpoint.txt
[2025-10-13 05:39:46] -rw-r--r-- 1 boinc boinc      8192 Oct 13 05:39 boinc_mmap_file
[2025-10-13 05:39:46] -rw-r--r-- 1 boinc boinc     20743 Oct 13 05:39 stderr.txt
[2025-10-13 05:39:46] HITS file was successfully produced:
[2025-10-13 05:39:46] -rw------- 1 boinc boinc 189068540 Oct 13 05:35 shared/HITS.pool.root.1
[2025-10-13 05:39:46]  *** Contents of shared directory: ***
[2025-10-13 05:39:46] total 402180
[2025-10-13 05:39:46] -rw-r--r-- 2 boinc boinc 220016993 Oct 13 02:13 ATLAS.root_0
[2025-10-13 05:39:46] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:13 start_atlas.sh
[2025-10-13 05:39:46] -rw-r--r-- 2 boinc boinc    569678 Oct 13 02:13 input.tar.gz
[2025-10-13 05:39:46] -rw------- 1 boinc boinc 189068540 Oct 13 05:35 HITS.pool.root.1
[2025-10-13 05:39:46] -rw------- 1 boinc boinc   2140160 Oct 13 05:37 result.tar.gz
05:39:48 (3525537): run_atlas exited; CPU time 47088.816151
05:39:48 (3525537): called boinc_finish(0)

</stderr_txt>
]]>

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