Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:58:25 (3386160): wrapper (7.7.26015): starting
10:58:25 (3386160): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 10:58:25] Arguments: --nthreads 4
[2025-10-12 10:58:25] Threads: 4
[2025-10-12 10:58:25] Checking for CVMFS
[2025-10-12 10:58:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:58:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:58:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:58:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:58:25] 2.13.2.0 1261730 1714 51260 151600 2 188 3678317 6144001 2733 130560 0 4668053 99.997 56275 102 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-10-12 10:58:25] CVMFS is ok
[2025-10-12 10:58:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:58:25] Checking for apptainer binary...
[2025-10-12 10:58:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:58:25] Running /usr/bin/apptainer --version
[2025-10-12 10:58:26] apptainer version 1.4.0
[2025-10-12 10:58:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:58:26] Zen
[2025-10-12 10:58:26] apptainer works
[2025-10-12 10:58:26] Set ATHENA_PROC_NUMBER=4
[2025-10-12 10:58:26] Set ATHENA_CORE_NUMBER=4
[2025-10-12 10:58:26] Starting ATLAS job with PandaID=6838632467
[2025-10-12 10:58:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:41:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:41:54] 2025-10-12 01:40:51,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:41:54] 2025-10-12 01:40:51,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:41:54] 2025-10-12 01:40:51,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:41:54] 2025-10-12 01:40:51,040 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:41:54] 2025-10-12 01:40:51,040 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,041 | INFO     | sum of deviations: 8170682149.0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,041 | INFO     | mean x: 1760230192.0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,041 | INFO     | mean y: 2262028.3168316833
[2025-10-12 12:41:54] 2025-10-12 01:40:51,041 | INFO     | -- intersect: -45020051967.23907
[2025-10-12 12:41:54] 2025-10-12 01:40:51,041 | INFO     | intersect: -45020051967.23907
[2025-10-12 12:41:54] 2025-10-12 01:40:51,041 | INFO     | chi2: 2.6556151951057076
[2025-10-12 12:41:54] 2025-10-12 01:40:51,041 | INFO     | sum of square deviations: 274312120.0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,041 | INFO     | sum of deviations: 13801456851.000006
[2025-10-12 12:41:54] 2025-10-12 01:40:51,042 | INFO     | mean x: 1760230039.5
[2025-10-12 12:41:54] 2025-10-12 01:40:51,042 | INFO     | mean y: 2280201.7291666665
[2025-10-12 12:41:54] 2025-10-12 01:40:51,042 | INFO     | -- intersect: -88560117033.9208
[2025-10-12 12:41:54] 2025-10-12 01:40:51,042 | INFO     | intersect: -88560117033.9208
[2025-10-12 12:41:54] 2025-10-12 01:40:51,042 | INFO     | chi2: 1.8757647955222476
[2025-10-12 12:41:54] 2025-10-12 01:40:51,042 | INFO     | current chi2=1.8757647955222476 (change=29.36609193307533 %)
[2025-10-12 12:41:54] 2025-10-12 01:40:51,042 | INFO     | sum of square deviations: 233641590.0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,042 | INFO     | sum of deviations: 13057848063.0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,042 | INFO     | mean x: 1760229887.0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,042 | INFO     | mean y: 2277414.2197802197
[2025-10-12 12:41:54] 2025-10-12 01:40:51,042 | INFO     | -- intersect: -98374105062.87968
[2025-10-12 12:41:54] 2025-10-12 01:40:51,042 | INFO     | intersect: -98374105062.87968
[2025-10-12 12:41:54] 2025-10-12 01:40:51,043 | INFO     | chi2: 1.8811996394673025
[2025-10-12 12:41:54] 2025-10-12 01:40:51,043 | INFO     | current chi2=1.8811996394673025 (change=-0.2897401613479865 %)
[2025-10-12 12:41:54] 2025-10-12 01:40:51,043 | INFO     | right removable region: 90
[2025-10-12 12:41:54] 2025-10-12 01:40:51,043 | INFO     | sum of square deviations: 274312120.0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,043 | INFO     | sum of deviations: -8685632010.0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,043 | INFO     | mean x: 1760230344.5
[2025-10-12 12:41:54] 2025-10-12 01:40:51,043 | INFO     | mean y: 2317927.1041666665
[2025-10-12 12:41:54] 2025-10-12 01:40:51,043 | INFO     | -- intersect: 55737051868.72704
[2025-10-12 12:41:54] 2025-10-12 01:40:51,043 | INFO     | intersect: 55737051868.72704
[2025-10-12 12:41:54] 2025-10-12 01:40:51,043 | INFO     | chi2: 0.8443873908605828
[2025-10-12 12:41:54] 2025-10-12 01:40:51,044 | INFO     | current chi2=0.8443873908605828 (change=68.20369937569318 %)
[2025-10-12 12:41:54] 2025-10-12 01:40:51,044 | INFO     | sum of square deviations: 233641590.0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,044 | INFO     | sum of deviations: -7730796569.999998
[2025-10-12 12:41:54] 2025-10-12 01:40:51,044 | INFO     | mean x: 1760230497.0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,044 | INFO     | mean y: 2314323.945054945
[2025-10-12 12:41:54] 2025-10-12 01:40:51,044 | INFO     | -- intersect: 58245300466.16824
[2025-10-12 12:41:54] 2025-10-12 01:40:51,044 | INFO     | intersect: 58245300466.16824
[2025-10-12 12:41:54] 2025-10-12 01:40:51,044 | INFO     | chi2: 0.8455025300606104
[2025-10-12 12:41:54] 2025-10-12 01:40:51,044 | INFO     | current chi2=0.8455025300606104 (change=-0.1320648806575694 %)
[2025-10-12 12:41:54] 2025-10-12 01:40:51,044 | INFO     | left removable region: 20
[2025-10-12 12:41:54] 2025-10-12 01:40:51,044 | INFO     | sum of square deviations: 106336877.5
[2025-10-12 12:41:54] 2025-10-12 01:40:51,045 | INFO     | sum of deviations: -167895424.00000003
[2025-10-12 12:41:54] 2025-10-12 01:40:51,045 | INFO     | mean x: 1760230466.5
[2025-10-12 12:41:54] 2025-10-12 01:40:51,045 | INFO     | mean y: 2328659.5428571426
[2025-10-12 12:41:54] 2025-10-12 01:40:51,045 | INFO     | -- intersect: 2781558663.8349743
[2025-10-12 12:41:54] 2025-10-12 01:40:51,045 | INFO     | intersect: 2781558663.8349743
[2025-10-12 12:41:54] 2025-10-12 01:40:51,045 | INFO     | chi2: 0.004624285705103413
[2025-10-12 12:41:54] 2025-10-12 01:40:51,045 | INFO     | -- intersect: 2781558663.8349743
[2025-10-12 12:41:54] 2025-10-12 01:40:51,045 | INFO     | current memory leak: -1.58 B/s (using 70 data points, chi2=0.00)
[2025-10-12 12:41:54] 2025-10-12 01:40:51,045 | INFO     | could have reported an average CPU frequency of 4155 MHz (7 samples)
[2025-10-12 12:41:54] 2025-10-12 01:40:51,045 | INFO     | ..............................
[2025-10-12 12:41:54] 2025-10-12 01:40:51,045 | INFO     | . Timing measurements:
[2025-10-12 12:41:54] 2025-10-12 01:40:51,045 | INFO     | . get job = 0 s
[2025-10-12 12:41:54] 2025-10-12 01:40:51,046 | INFO     | . initial setup = 5 s
[2025-10-12 12:41:54] 2025-10-12 01:40:51,046 | INFO     | . payload setup = 3 s
[2025-10-12 12:41:54] 2025-10-12 01:40:51,046 | INFO     | . stage-in = 0 s
[2025-10-12 12:41:54] 2025-10-12 01:40:51,046 | INFO     | . payload execution = 6105 s
[2025-10-12 12:41:54] 2025-10-12 01:40:51,046 | INFO     | . stage-out = 0 s
[2025-10-12 12:41:54] 2025-10-12 01:40:51,046 | INFO     | . log creation = 0 s
[2025-10-12 12:41:54] 2025-10-12 01:40:51,046 | INFO     | ..............................
[2025-10-12 12:41:54] 2025-10-12 01:40:51,069 | INFO     | time since job start (6134s) is within the limit (172800.0s)
[2025-10-12 12:41:54] 2025-10-12 01:40:51,107 | INFO     | 
[2025-10-12 12:41:54] 2025-10-12 01:40:51,107 | INFO     | job summary report
[2025-10-12 12:41:54] 2025-10-12 01:40:51,107 | INFO     | --------------------------------------------------
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | PanDA job id: 6838632467
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | task id: 46676269
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | errors: (none)
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | pilot state: finished 
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | transexitcode: 0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | exeerrorcode: 0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | exeerrordiag: 
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | exitcode: 0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | exitmsg: OK
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | cpuconsumptiontime: 23331 s
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | nevents: 400
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | neventsw: 0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | pid: 3396544
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | pgrp: 3396544
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | corecount: 4
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | event service: False
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | sizes: {0: 2348703, 1: 2348845, 3: 2349107, 11: 2349135, 6112: 2376055, 6113: 2385259, 6115: 2385397}
[2025-10-12 12:41:54] 2025-10-12 01:40:51,108 | INFO     | --------------------------------------------------
[2025-10-12 12:41:54] 2025-10-12 01:40:51,109 | INFO     | 
[2025-10-12 12:41:54] 2025-10-12 01:40:51,109 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/0
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,126 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:41:54] 2025-10-12 01:40:51,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,126 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:41:54] 2025-10-12 01:40:51,126 | INFO     | job 6838632467 has completed (purged errors)
[2025-10-12 12:41:54] 2025-10-12 01:40:51,126 | INFO     | overall cleanup function is called
[2025-10-12 12:41:54] 2025-10-12 01:40:52,133 | INFO     | --- collectZombieJob: --- 10, [3396544]
[2025-10-12 12:41:54] 2025-10-12 01:40:52,133 | INFO     | zombie collector waiting for pid 3396544
[2025-10-12 12:41:54] 2025-10-12 01:40:52,133 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:41:54] 2025-10-12 01:40:52,133 | INFO     | collected zombie processes
[2025-10-12 12:41:54] 2025-10-12 01:40:52,133 | INFO     | will attempt to kill all subprocesses of pid=3396544
[2025-10-12 12:41:54] 2025-10-12 01:40:52,246 | INFO     | process IDs to be killed: [3396544] (in reverse order)
[2025-10-12 12:41:54] 2025-10-12 01:40:52,299 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:41:54] 2025-10-12 01:40:52,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:41:54] 2025-10-12 01:40:52,303 | INFO     | did not find any defunct processes belonging to 3396544
[2025-10-12 12:41:54] 2025-10-12 01:40:52,307 | INFO     | did not find any defunct processes belonging to 3396544
[2025-10-12 12:41:54] 2025-10-12 01:40:52,307 | INFO     | ready for new job
[2025-10-12 12:41:54] 2025-10-12 01:40:52,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:41:54] 2025-10-12 01:40:52,308 | INFO     | ***************************************
[2025-10-12 12:41:54] 2025-10-12 01:40:52,308 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:41:54] 2025-10-12 01:40:52,308 | INFO     | ***************************************
[2025-10-12 12:41:54] 2025-10-12 01:40:52,308 | INFO     | 
[2025-10-12 12:41:54] 2025-10-12 01:40:52,310 | INFO     | architecture information:
[2025-10-12 12:41:54] 2025-10-12 01:40:52,310 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:41:54] 2025-10-12 01:40:52,322 | INFO     | cat /etc/os-release:
[2025-10-12 12:41:54] NAME="CentOS Linux"
[2025-10-12 12:41:54] VERSION="7 (Core)"
[2025-10-12 12:41:54] ID="centos"
[2025-10-12 12:41:54] ID_LIKE="rhel fedora"
[2025-10-12 12:41:54] VERSION_ID="7"
[2025-10-12 12:41:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:41:54] ANSI_COLOR="0;31"
[2025-10-12 12:41:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:41:54] HOME_URL="https://www.centos.org/"
[2025-10-12 12:41:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:41:54] 
[2025-10-12 12:41:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:41:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:41:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:41:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:41:54] 
[2025-10-12 12:41:54] 2025-10-12 01:40:52,323 | INFO     | ***************************************
[2025-10-12 12:41:54] 2025-10-12 01:40:52,825 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/0
[2025-10-12 12:41:54] 2025-10-12 01:40:52,839 | INFO     | sufficient remaining disk space (207391555584 B)
[2025-10-12 12:41:54] 2025-10-12 01:40:52,839 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:41:54] 2025-10-12 01:40:52,839 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:41:54] 2025-10-12 01:40:52,839 | INFO     | update_server=False
[2025-10-12 12:41:54] 2025-10-12 01:40:52,839 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:41:54] 2025-10-12 01:40:52,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:41:54] 2025-10-12 01:40:52,840 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 12:41:54] 2025-10-12 01:40:52,840 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:41:54] 2025-10-12 01:40:52,840 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:41:54] 2025-10-12 01:40:52,840 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:41:54] 2025-10-12 01:40:52,988 | INFO     | all payload control threads have been joined
[2025-10-12 12:41:54] 2025-10-12 01:40:53,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:41:54] 2025-10-12 01:40:53,154 | INFO     | aborting loop
[2025-10-12 12:41:54] 2025-10-12 01:40:53,564 | INFO     | all job control threads have been joined
[2025-10-12 12:41:54] 2025-10-12 01:40:53,845 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:53,845 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:53,869 | INFO     | all data control threads have been joined
[2025-10-12 12:41:54] 2025-10-12 01:40:53,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:41:54] 2025-10-12 01:40:53,993 | INFO     | [payload] control thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:54,159 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:54,190 | INFO     | [job] validate thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:54,283 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:54,345 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:54,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:41:54] 2025-10-12 01:40:54,478 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:54,542 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:54,570 | INFO     | [job] control thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:54,773 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:54,875 | INFO     | [data] control thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:54,905 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:55,241 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:55,885 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:40:58,445 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:41:54] 2025-10-12 01:41:47,030 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:41:54] 2025-10-12 01:41:48,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126096620820288)>', '<ExcThread(monitor, started 126096120989440)>']
[2025-10-12 12:41:54] 2025-10-12 01:41:49,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:41:54] 2025-10-12 01:41:49,109 | INFO     | [monitor] control thread has ended
[2025-10-12 12:41:54] 2025-10-12 01:41:53,825 | INFO     | all workflow threads have been joined
[2025-10-12 12:41:54] 2025-10-12 01:41:53,825 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:41:54] 2025-10-12 01:41:53,825 | INFO     | traces error code: 0
[2025-10-12 12:41:54] 2025-10-12 01:41:53,825 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:41:54] 2025-10-12 01:41:53,907 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:41:54] 2025-10-12 01:41:53,908 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:41:54] 2025-10-12 01:41:53,910 [wrapper] pilotpid: 3389968
[2025-10-12 12:41:54] 2025-10-12 01:41:53,911 [wrapper] Pilot exit status: 0
[2025-10-12 12:41:54] 2025-10-12 01:41:53,919 [wrapper] pandaids: 6838632467
[2025-10-12 12:41:54] 2025-10-12 01:41:53,951 [wrapper] cleanup supervisor_pilot 3462259 3389969
[2025-10-12 12:41:54] 2025-10-12 01:41:53,954 [wrapper] Test setup, not cleaning
[2025-10-12 12:41:54] 2025-10-12 01:41:53,956 [wrapper] apfmon messages muted
[2025-10-12 12:41:54] 2025-10-12 01:41:53,958 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:41:54] 2025-10-12 01:41:53,960 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:41:54]  *** Error codes and diagnostics ***
[2025-10-12 12:41:54]     "exeErrorCode": 0,
[2025-10-12 12:41:54]     "exeErrorDiag": "",
[2025-10-12 12:41:54]     "pilotErrorCode": 0,
[2025-10-12 12:41:54]     "pilotErrorDiag": "",
[2025-10-12 12:41:54]  *** Listing of results directory ***
[2025-10-12 12:41:54] total 412064
[2025-10-12 12:41:54] -rw-r--r-- 1 michael michael    557409 Oct 12 03:20 pilot3.tar.gz
[2025-10-12 12:41:54] -rw-r--r-- 1 michael michael      5112 Oct 12 03:24 queuedata.json
[2025-10-12 12:41:54] -rwx------ 1 michael michael     36292 Oct 12 03:25 runpilot2-wrapper.sh
[2025-10-12 12:41:54] -rw-rw-r-- 1 michael michael       100 Oct 12 10:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:41:54] -rwxr-xr-x 1 michael michael      7986 Oct 12 10:58 run_atlas
[2025-10-12 12:41:54] -rw-rw-r-- 1 michael michael       105 Oct 12 10:58 job.xml
[2025-10-12 12:41:54] -rw-r--r-- 2 michael michael 219413511 Oct 12 10:58 EVNT.46676267._002449.pool.root.1
[2025-10-12 12:41:54] -rw-rw-r-- 1 michael michael      9816 Oct 12 10:58 init_data.xml
[2025-10-12 12:41:54] -rw-r--r-- 2 michael michael    569679 Oct 12 10:58 input.tar.gz
[2025-10-12 12:41:54] drwxrwx--x 2 michael michael      4096 Oct 12 10:58 shared
[2025-10-12 12:41:54] -rw-r--r-- 2 michael michael     15120 Oct 12 10:58 start_atlas.sh
[2025-10-12 12:41:54] -rw-rw-r-- 1 michael michael         0 Oct 12 10:58 boinc_lockfile
[2025-10-12 12:41:54] -rw-rw-r-- 1 michael michael      2549 Oct 12 10:58 pandaJob.out
[2025-10-12 12:41:54] -rw------- 1 michael michael    975528 Oct 12 10:58 agis_schedconf.cvmfs.json
[2025-10-12 12:41:54] -rw------- 1 michael michael   1560580 Oct 12 10:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:41:54] drwx------ 5 michael michael      4096 Oct 12 10:58 pilot3
[2025-10-12 12:41:54] -rw------- 1 michael michael        95 Oct 12 12:39 pilot_heartbeat.json
[2025-10-12 12:41:54] -rw------- 1 michael michael 196247858 Oct 12 12:40 HITS.46676269._060977.pool.root.1
[2025-10-12 12:41:54] -rw------- 1 michael michael      1024 Oct 12 12:40 memory_monitor_summary.json
[2025-10-12 12:41:54] -rw-rw-r-- 1 michael michael       529 Oct 12 12:40 boinc_task_state.xml
[2025-10-12 12:41:54] -rw------- 1 michael michael    279379 Oct 12 12:40 log.46676269._060977.job.log.tgz.1
[2025-10-12 12:41:54] -rw------- 1 michael michael      7727 Oct 12 12:40 heartbeat.json
[2025-10-12 12:41:54] -rw-rw-r-- 1 michael michael      8192 Oct 12 12:41 boinc_mmap_file
[2025-10-12 12:41:54] -rw-rw-r-- 1 michael michael        27 Oct 12 12:41 wrapper_checkpoint.txt
[2025-10-12 12:41:54] -rw------- 1 michael michael      4564 Oct 12 12:41 pilotlog.txt
[2025-10-12 12:41:54] -rw------- 1 michael michael    909737 Oct 12 12:41 log.46676269._060977.job.log.1
[2025-10-12 12:41:54] -rw------- 1 michael michael       357 Oct 12 12:41 output.list
[2025-10-12 12:41:54] -rw-rw-r-- 1 michael michael       620 Oct 12 12:41 runtime_log
[2025-10-12 12:41:54] -rw------- 1 michael michael   1208320 Oct 12 12:41 result.tar.gz
[2025-10-12 12:41:54] -rw-rw-r-- 1 michael michael      8797 Oct 12 12:41 runtime_log.err
[2025-10-12 12:41:54] -rw------- 1 michael michael       640 Oct 12 12:41 9XOLDmOarR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrwgNDmOnSlVn.diag
[2025-10-12 12:41:54] -rw-rw-r-- 1 michael michael     20529 Oct 12 12:41 stderr.txt
[2025-10-12 12:41:54] HITS file was successfully produced:
[2025-10-12 12:41:54] -rw------- 1 michael michael 196247858 Oct 12 12:40 shared/HITS.pool.root.1
[2025-10-12 12:41:54]  *** Contents of shared directory: ***
[2025-10-12 12:41:54] total 407688
[2025-10-12 12:41:54] -rw-r--r-- 2 michael michael 219413511 Oct 12 10:58 ATLAS.root_0
[2025-10-12 12:41:54] -rw-r--r-- 2 michael michael    569679 Oct 12 10:58 input.tar.gz
[2025-10-12 12:41:54] -rw-r--r-- 2 michael michael     15120 Oct 12 10:58 start_atlas.sh
[2025-10-12 12:41:54] -rw------- 1 michael michael 196247858 Oct 12 12:40 HITS.pool.root.1
[2025-10-12 12:41:54] -rw------- 1 michael michael   1208320 Oct 12 12:41 result.tar.gz
12:41:55 (3386160): run_atlas exited; CPU time 23394.508184
12:41:55 (3386160): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN