Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:37:16 (14930): wrapper (7.7.26015): starting
14:37:16 (14930): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 14:37:16] Arguments: --nthreads 8
[2025-10-11 14:37:16] Threads: 8
[2025-10-11 14:37:16] Checking for CVMFS
[2025-10-11 14:37:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:37:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:37:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:37:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:37:17] 2.11.2.0 4362 112358 139172 151593 3 59 18083931 18432001 1833 130560 1 109186226 99.989 4931914 22207 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 14:37:17] CVMFS is ok
[2025-10-11 14:37:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:37:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:37:17] Further information can be found at the LHC@home message board.
[2025-10-11 14:37:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:37:17] Checking for apptainer binary...
[2025-10-11 14:37:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:37:17] Running /usr/bin/apptainer --version
[2025-10-11 14:37:17] apptainer version 1.3.2-1.el7
[2025-10-11 14:37:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:37:17] c-206-29.aglt2.org
[2025-10-11 14:37:17] apptainer works
[2025-10-11 14:37:17] Set ATHENA_PROC_NUMBER=8
[2025-10-11 14:37:17] Set ATHENA_CORE_NUMBER=8
[2025-10-11 14:37:17] Starting ATLAS job with PandaID=6837358377
[2025-10-11 14:37:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:33:51]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:33:51] 2025-10-11 21:33:11,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:33:51] 2025-10-11 21:33:11,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:33:51] 2025-10-11 21:33:11,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:33:51] 2025-10-11 21:33:11,073 | INFO     | fitting pss+swap vs Time
[2025-10-11 17:33:51] 2025-10-11 21:33:11,073 | INFO     | sum of square deviations: 1605470102.0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,074 | INFO     | sum of deviations: -13116498892.0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,074 | INFO     | mean x: 1760213121.0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,074 | INFO     | mean y: 2488672.8843930634
[2025-10-11 17:33:51] 2025-10-11 21:33:11,075 | INFO     | -- intersect: 14383219539.512741
[2025-10-11 17:33:51] 2025-10-11 21:33:11,075 | INFO     | intersect: 14383219539.512741
[2025-10-11 17:33:51] 2025-10-11 21:33:11,075 | INFO     | chi2: 2.495557677397441
[2025-10-11 17:33:51] 2025-10-11 21:33:11,075 | INFO     | sum of square deviations: 1470248962.0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,076 | INFO     | sum of deviations: -1029974599.4999979
[2025-10-11 17:33:51] 2025-10-11 21:33:11,076 | INFO     | mean x: 1760212968.5
[2025-10-11 17:33:51] 2025-10-11 21:33:11,076 | INFO     | mean y: 2501995.5178571427
[2025-10-11 17:33:51] 2025-10-11 21:33:11,076 | INFO     | -- intersect: 1235609240.7012002
[2025-10-11 17:33:51] 2025-10-11 21:33:11,076 | INFO     | intersect: 1235609240.7012002
[2025-10-11 17:33:51] 2025-10-11 21:33:11,077 | INFO     | chi2: 1.6861368081805643
[2025-10-11 17:33:51] 2025-10-11 21:33:11,077 | INFO     | current chi2=1.6861368081805643 (change=32.43446851771436 %)
[2025-10-11 17:33:51] 2025-10-11 21:33:11,077 | INFO     | sum of square deviations: 1342841922.0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,078 | INFO     | sum of deviations: -839488405.0000008
[2025-10-11 17:33:51] 2025-10-11 21:33:11,078 | INFO     | mean x: 1760212816.0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,078 | INFO     | mean y: 2502223.5705521475
[2025-10-11 17:33:51] 2025-10-11 21:33:11,078 | INFO     | -- intersect: 1102913392.7151506
[2025-10-11 17:33:51] 2025-10-11 21:33:11,078 | INFO     | intersect: 1102913392.7151506
[2025-10-11 17:33:51] 2025-10-11 21:33:11,079 | INFO     | chi2: 1.6864370343397925
[2025-10-11 17:33:51] 2025-10-11 21:33:11,079 | INFO     | current chi2=1.6864370343397925 (change=-0.017805563449632626 %)
[2025-10-11 17:33:51] 2025-10-11 21:33:11,079 | INFO     | right removable region: 162
[2025-10-11 17:33:51] 2025-10-11 21:33:11,079 | INFO     | sum of square deviations: 1470248962.0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,080 | INFO     | sum of deviations: -39817195815.0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,080 | INFO     | mean x: 1760213273.5
[2025-10-11 17:33:51] 2025-10-11 21:33:11,080 | INFO     | mean y: 2518404.535714286
[2025-10-11 17:33:51] 2025-10-11 21:33:11,080 | INFO     | -- intersect: 47672510629.37066
[2025-10-11 17:33:51] 2025-10-11 21:33:11,081 | INFO     | intersect: 47672510629.37066
[2025-10-11 17:33:51] 2025-10-11 21:33:11,081 | INFO     | chi2: 1.0020400016914446
[2025-10-11 17:33:51] 2025-10-11 21:33:11,081 | INFO     | current chi2=1.0020400016914446 (change=59.84705099116569 %)
[2025-10-11 17:33:51] 2025-10-11 21:33:11,081 | INFO     | sum of square deviations: 1342841922.0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,082 | INFO     | sum of deviations: -36822547032.0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,082 | INFO     | mean x: 1760213426.0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,082 | INFO     | mean y: 2514772.1288343556
[2025-10-11 17:33:51] 2025-10-11 21:33:11,082 | INFO     | -- intersect: 48269954597.59093
[2025-10-11 17:33:51] 2025-10-11 21:33:11,082 | INFO     | intersect: 48269954597.59093
[2025-10-11 17:33:51] 2025-10-11 21:33:11,083 | INFO     | chi2: 0.9925344545062113
[2025-10-11 17:33:51] 2025-10-11 21:33:11,083 | INFO     | current chi2=0.9925344545062113 (change=0.9486195330713303 %)
[2025-10-11 17:33:51] 2025-10-11 21:33:11,083 | INFO     | left removable region: 20
[2025-10-11 17:33:51] 2025-10-11 21:33:11,083 | INFO     | sum of square deviations: 887813855.5
[2025-10-11 17:33:51] 2025-10-11 21:33:11,084 | INFO     | sum of deviations: -13833785356.500002
[2025-10-11 17:33:51] 2025-10-11 21:33:11,084 | INFO     | mean x: 1760213395.5
[2025-10-11 17:33:51] 2025-10-11 21:33:11,084 | INFO     | mean y: 2516055.9929577466
[2025-10-11 17:33:51] 2025-10-11 21:33:11,084 | INFO     | -- intersect: 27429903164.374313
[2025-10-11 17:33:51] 2025-10-11 21:33:11,084 | INFO     | intersect: 27429903164.374313
[2025-10-11 17:33:51] 2025-10-11 21:33:11,084 | INFO     | chi2: 0.11931427883235866
[2025-10-11 17:33:51] 2025-10-11 21:33:11,085 | INFO     | -- intersect: 27429903164.374313
[2025-10-11 17:33:51] 2025-10-11 21:33:11,085 | INFO     | current memory leak: -15.58 B/s (using 142 data points, chi2=0.12)
[2025-10-11 17:33:51] 2025-10-11 21:33:11,085 | INFO     | could have reported an average CPU frequency of 2529 MHz (9 samples)
[2025-10-11 17:33:51] 2025-10-11 21:33:11,085 | INFO     | ..............................
[2025-10-11 17:33:51] 2025-10-11 21:33:11,085 | INFO     | . Timing measurements:
[2025-10-11 17:33:51] 2025-10-11 21:33:11,085 | INFO     | . get job = 0 s
[2025-10-11 17:33:51] 2025-10-11 21:33:11,085 | INFO     | . initial setup = 2 s
[2025-10-11 17:33:51] 2025-10-11 21:33:11,086 | INFO     | . payload setup = 5 s
[2025-10-11 17:33:51] 2025-10-11 21:33:11,086 | INFO     | . stage-in = 0 s
[2025-10-11 17:33:51] 2025-10-11 21:33:11,086 | INFO     | . payload execution = 10511 s
[2025-10-11 17:33:51] 2025-10-11 21:33:11,086 | INFO     | . stage-out = 1 s
[2025-10-11 17:33:51] 2025-10-11 21:33:11,086 | INFO     | . log creation = 0 s
[2025-10-11 17:33:51] 2025-10-11 21:33:11,086 | INFO     | ..............................
[2025-10-11 17:33:51] 2025-10-11 21:33:11,174 | INFO     | 
[2025-10-11 17:33:51] 2025-10-11 21:33:11,174 | INFO     | job summary report
[2025-10-11 17:33:51] 2025-10-11 21:33:11,174 | INFO     | --------------------------------------------------
[2025-10-11 17:33:51] 2025-10-11 21:33:11,175 | INFO     | PanDA job id: 6837358377
[2025-10-11 17:33:51] 2025-10-11 21:33:11,175 | INFO     | task id: 46676269
[2025-10-11 17:33:51] 2025-10-11 21:33:11,175 | INFO     | errors: (none)
[2025-10-11 17:33:51] 2025-10-11 21:33:11,175 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:33:51] 2025-10-11 21:33:11,175 | INFO     | pilot state: finished 
[2025-10-11 17:33:51] 2025-10-11 21:33:11,176 | INFO     | transexitcode: 0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,176 | INFO     | exeerrorcode: 0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,176 | INFO     | exeerrordiag: 
[2025-10-11 17:33:51] 2025-10-11 21:33:11,176 | INFO     | exitcode: 0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,176 | INFO     | exitmsg: OK
[2025-10-11 17:33:51] 2025-10-11 21:33:11,176 | INFO     | cpuconsumptiontime: 80027 s
[2025-10-11 17:33:51] 2025-10-11 21:33:11,177 | INFO     | nevents: 400
[2025-10-11 17:33:51] 2025-10-11 21:33:11,177 | INFO     | neventsw: 0
[2025-10-11 17:33:51] 2025-10-11 21:33:11,177 | INFO     | pid: 25078
[2025-10-11 17:33:51] 2025-10-11 21:33:11,177 | INFO     | pgrp: 25078
[2025-10-11 17:33:51] 2025-10-11 21:33:11,177 | INFO     | corecount: 8
[2025-10-11 17:33:51] 2025-10-11 21:33:11,177 | INFO     | event service: False
[2025-10-11 17:33:51] 2025-10-11 21:33:11,178 | INFO     | sizes: {0: 2348855, 4: 2349117, 11: 2349145, 10520: 2377830, 10521: 2386828, 10522: 2386884, 10527: 2387270}
[2025-10-11 17:33:51] 2025-10-11 21:33:11,178 | INFO     | --------------------------------------------------
[2025-10-11 17:33:51] 2025-10-11 21:33:11,178 | INFO     | 
[2025-10-11 17:33:51] 2025-10-11 21:33:11,178 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 17:33:51] 2025-10-11 21:33:11,196 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,197 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,197 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,197 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,197 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,197 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,197 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,197 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,197 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,198 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,198 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,198 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:33:51] 2025-10-11 21:33:11,198 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,198 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:33:51] 2025-10-11 21:33:11,199 | INFO     | job 6837358377 has completed (purged errors)
[2025-10-11 17:33:51] 2025-10-11 21:33:11,199 | INFO     | overall cleanup function is called
[2025-10-11 17:33:51] 2025-10-11 21:33:12,205 | INFO     | --- collectZombieJob: --- 10, [25078]
[2025-10-11 17:33:51] 2025-10-11 21:33:12,206 | INFO     | zombie collector waiting for pid 25078
[2025-10-11 17:33:51] 2025-10-11 21:33:12,206 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:33:51] 2025-10-11 21:33:12,206 | INFO     | collected zombie processes
[2025-10-11 17:33:51] 2025-10-11 21:33:12,206 | INFO     | will attempt to kill all subprocesses of pid=25078
[2025-10-11 17:33:51] 2025-10-11 21:33:12,315 | INFO     | process IDs to be killed: [25078] (in reverse order)
[2025-10-11 17:33:51] 2025-10-11 21:33:12,369 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:33:51] 2025-10-11 21:33:12,369 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:33:51] 2025-10-11 21:33:12,375 | INFO     | did not find any defunct processes belonging to 25078
[2025-10-11 17:33:51] 2025-10-11 21:33:12,380 | INFO     | did not find any defunct processes belonging to 25078
[2025-10-11 17:33:51] 2025-10-11 21:33:12,380 | INFO     | ready for new job
[2025-10-11 17:33:51] 2025-10-11 21:33:12,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:33:51] 2025-10-11 21:33:12,382 | INFO     | ***************************************
[2025-10-11 17:33:51] 2025-10-11 21:33:12,383 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:33:51] 2025-10-11 21:33:12,383 | INFO     | ***************************************
[2025-10-11 17:33:51] 2025-10-11 21:33:12,383 | INFO     | 
[2025-10-11 17:33:51] 2025-10-11 21:33:12,384 | INFO     | architecture information:
[2025-10-11 17:33:51] 2025-10-11 21:33:12,385 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:33:51] 2025-10-11 21:33:12,400 | INFO     | cat /etc/os-release:
[2025-10-11 17:33:51] NAME="CentOS Linux"
[2025-10-11 17:33:51] VERSION="7 (Core)"
[2025-10-11 17:33:51] ID="centos"
[2025-10-11 17:33:51] ID_LIKE="rhel fedora"
[2025-10-11 17:33:51] VERSION_ID="7"
[2025-10-11 17:33:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:33:51] ANSI_COLOR="0;31"
[2025-10-11 17:33:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:33:51] HOME_URL="https://www.centos.org/"
[2025-10-11 17:33:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:33:51] 
[2025-10-11 17:33:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:33:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:33:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:33:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:33:51] 
[2025-10-11 17:33:51] 2025-10-11 21:33:12,400 | INFO     | ***************************************
[2025-10-11 17:33:51] 2025-10-11 21:33:12,903 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 17:33:51] 2025-10-11 21:33:12,914 | INFO     | sufficient remaining disk space (28130148352 B)
[2025-10-11 17:33:51] 2025-10-11 21:33:12,915 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:33:51] 2025-10-11 21:33:12,915 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:33:51] 2025-10-11 21:33:12,915 | INFO     | update_server=False
[2025-10-11 17:33:51] 2025-10-11 21:33:12,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:33:51] 2025-10-11 21:33:12,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:33:51] 2025-10-11 21:33:13,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:33:51] 2025-10-11 21:33:13,053 | INFO     | aborting loop
[2025-10-11 17:33:51] 2025-10-11 21:33:13,177 | INFO     | all data control threads have been joined
[2025-10-11 17:33:51] 2025-10-11 21:33:13,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:33:51] 2025-10-11 21:33:13,487 | INFO     | all job control threads have been joined
[2025-10-11 17:33:51] 2025-10-11 21:33:13,920 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:13,920 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:14,058 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:14,060 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:14,061 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:14,116 | INFO     | [job] validate thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:14,183 | INFO     | [data] control thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:14,183 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:14,288 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:14,367 | INFO     | all payload control threads have been joined
[2025-10-11 17:33:51] 2025-10-11 21:33:14,457 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:14,488 | INFO     | [job] control thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:14,851 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:15,294 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:15,373 | INFO     | [payload] control thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:15,406 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:16,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:33:51] 2025-10-11 21:33:20,013 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:33:51] 2025-10-11 21:33:43,175 | INFO     | PID=18684 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 17:33:51] 2025-10-11 21:33:43,175 | INFO     | .. there are 3 such processes running
[2025-10-11 17:33:51] 2025-10-11 21:33:43,176 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:33:51] 2025-10-11 21:33:43,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:33:51] 2025-10-11 21:33:43,176 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:33:51] 2025-10-11 21:33:46,087 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:33:51] 2025-10-11 21:33:46,212 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140274155820864)>', '<ExcThread(monitor, started 140273422165760)>']
[2025-10-11 17:33:51] 2025-10-11 21:33:47,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:33:51] 2025-10-11 21:33:47,197 | INFO     | [monitor] control thread has ended
[2025-10-11 17:33:51] 2025-10-11 21:33:51,237 | INFO     | all workflow threads have been joined
[2025-10-11 17:33:51] 2025-10-11 21:33:51,238 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:33:51] 2025-10-11 21:33:51,238 | INFO     | traces error code: 0
[2025-10-11 17:33:51] 2025-10-11 21:33:51,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:33:51] 2025-10-11 21:33:51,363 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:33:51] 2025-10-11 21:33:51,366 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:33:51] 2025-10-11 21:33:51,368 [wrapper] pilotpid: 18684
[2025-10-11 17:33:51] 2025-10-11 21:33:51,371 [wrapper] Pilot exit status: 0
[2025-10-11 17:33:51] 2025-10-11 21:33:51,387 [wrapper] pandaids: 6837358377
[2025-10-11 17:33:51] 2025-10-11 21:33:51,421 [wrapper] cleanup supervisor_pilot 15315 18685
[2025-10-11 17:33:51] 2025-10-11 21:33:51,424 [wrapper] Test setup, not cleaning
[2025-10-11 17:33:51] 2025-10-11 21:33:51,427 [wrapper] apfmon messages muted
[2025-10-11 17:33:51] 2025-10-11 21:33:51,429 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:33:51] 2025-10-11 21:33:51,432 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:33:51]  *** Error codes and diagnostics ***
[2025-10-11 17:33:51]     "exeErrorCode": 0,
[2025-10-11 17:33:51]     "exeErrorDiag": "",
[2025-10-11 17:33:51]     "pilotErrorCode": 0,
[2025-10-11 17:33:51]     "pilotErrorDiag": "",
[2025-10-11 17:33:51]  *** Listing of results directory ***
[2025-10-11 17:33:51] total 410632
[2025-10-11 17:33:51] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 14:29 pilot3.tar.gz
[2025-10-11 17:33:51] -rwx------ 1 boincer umatlas     36292 Oct  9 14:38 runpilot2-wrapper.sh
[2025-10-11 17:33:51] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 14:38 queuedata.json
[2025-10-11 17:33:51] -rw-r--r-- 1 boincer umatlas       100 Oct 11 14:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:33:51] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 14:37 run_atlas
[2025-10-11 17:33:51] -rw-r--r-- 1 boincer umatlas       105 Oct 11 14:37 job.xml
[2025-10-11 17:33:51] -rw-r--r-- 2 boincer umatlas 221544344 Oct 11 14:37 EVNT.46676267._000998.pool.root.1
[2025-10-11 17:33:51] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 14:37 start_atlas.sh
[2025-10-11 17:33:51] drwxrwx--x 2 boincer umatlas      4096 Oct 11 14:37 shared
[2025-10-11 17:33:51] -rw-r--r-- 2 boincer umatlas    569679 Oct 11 14:37 input.tar.gz
[2025-10-11 17:33:51] -rw-r--r-- 1 boincer umatlas         0 Oct 11 14:37 boinc_lockfile
[2025-10-11 17:33:51] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 14:37 pandaJob.out
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas    975520 Oct 11 14:37 agis_schedconf.cvmfs.json
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas   1560580 Oct 11 14:37 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:33:51] drwx------ 5 boincer umatlas      4096 Oct 11 14:37 pilot3
[2025-10-11 17:33:51] -rw-r--r-- 1 boincer umatlas      5951 Oct 11 17:31 init_data.xml
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas 191263665 Oct 11 17:32 HITS.46676269._024339.pool.root.1
[2025-10-11 17:33:51] -rw-r--r-- 1 boincer umatlas       530 Oct 11 17:32 boinc_task_state.xml
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas      1054 Oct 11 17:33 memory_monitor_summary.json
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas        95 Oct 11 17:33 pilot_heartbeat.json
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas    407484 Oct 11 17:33 log.46676269._024339.job.log.tgz.1
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas      7857 Oct 11 17:33 heartbeat.json
[2025-10-11 17:33:51] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 17:33 boinc_mmap_file
[2025-10-11 17:33:51] -rw-r--r-- 1 boincer umatlas        28 Oct 11 17:33 wrapper_checkpoint.txt
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas      4821 Oct 11 17:33 pilotlog.txt
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas   1482768 Oct 11 17:33 log.46676269._024339.job.log.1
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas       357 Oct 11 17:33 output.list
[2025-10-11 17:33:51] -rw-r--r-- 1 boincer umatlas       620 Oct 11 17:33 runtime_log
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas   1904640 Oct 11 17:33 result.tar.gz
[2025-10-11 17:33:51] -rw-r--r-- 1 boincer umatlas      8704 Oct 11 17:33 runtime_log.err
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas       662 Oct 11 17:33 67ULDmuhAR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmAXOMDm148sSn.diag
[2025-10-11 17:33:51] -rw-r--r-- 1 boincer umatlas     20867 Oct 11 17:33 stderr.txt
[2025-10-11 17:33:51] HITS file was successfully produced:
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas 191263665 Oct 11 17:32 shared/HITS.pool.root.1
[2025-10-11 17:33:51]  *** Contents of shared directory: ***
[2025-10-11 17:33:51] total 405576
[2025-10-11 17:33:51] -rw-r--r-- 2 boincer umatlas 221544344 Oct 11 14:37 ATLAS.root_0
[2025-10-11 17:33:51] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 14:37 start_atlas.sh
[2025-10-11 17:33:51] -rw-r--r-- 2 boincer umatlas    569679 Oct 11 14:37 input.tar.gz
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas 191263665 Oct 11 17:32 HITS.pool.root.1
[2025-10-11 17:33:51] -rw------- 1 boincer umatlas   1904640 Oct 11 17:33 result.tar.gz
17:33:52 (14930): run_atlas exited; CPU time 80156.034822
17:33:52 (14930): called boinc_finish(0)

</stderr_txt>
]]>

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