Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
18:48:36 (3397594): wrapper (7.7.26015): starting
18:48:36 (3397594): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 18:48:36] Arguments: --nthreads 12
[2025-10-11 18:48:36] Threads: 12
[2025-10-11 18:48:36] Checking for CVMFS
[2025-10-11 18:48:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:48:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:48:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:48:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:48:37] 2.11.0.0 3299214 2002 85264 151593 1 188 5194398 6144001 13643 130560 0 39339586 100.000 72585 205 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-11 18:48:37] CVMFS is ok
[2025-10-11 18:48:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:48:37] Checking for apptainer binary...
[2025-10-11 18:48:37] apptainer is not installed, using version from CVMFS
[2025-10-11 18:48:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:48:37] radiat0r
[2025-10-11 18:48:37] apptainer works
[2025-10-11 18:48:37] Set ATHENA_PROC_NUMBER=12
[2025-10-11 18:48:37] Set ATHENA_CORE_NUMBER=12
[2025-10-11 18:48:37] Starting ATLAS job with PandaID=6835977255
[2025-10-11 18:48:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:44:01]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:44:01]  scope=mc23_13p6TeV
[2025-10-11 19:44:01]  status=None
[2025-10-11 19:44:01]  status_code=0
[2025-10-11 19:44:01]  storage_token=
[2025-10-11 19:44:01]  surl=/var/lib/boinc/slots/13/PanDA_Pilot-6835977255/log.46676269._003544.job.log.tgz.1
[2025-10-11 19:44:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/87/log.46676269._003544.job.log.tgz.1
[2025-10-11 19:44:01]  workdir=None
[2025-10-11 19:44:01] ]
[2025-10-11 19:44:01] 2025-10-11 19:42:53,890 | INFO     | transferring file log.46676269._003544.job.log.tgz.1 from /var/lib/boinc/slots/13/PanDA_Pilot-6835977255/log.46676269._003544.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-11 19:44:01] 2025-10-11 19:42:53,891 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/13/PanDA_Pilot-6835977255/log.46676269._003544.job.log.tgz.1 /var/lib/boinc/slots/13/log.46676269._003544.j
[2025-10-11 19:44:01] 2025-10-11 19:42:53,910 | INFO     | adding to output.list: log.46676269._003544.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/87/log.46676269._003544.job.log.tg
[2025-10-11 19:44:01] 2025-10-11 19:42:53,911 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 19:44:01] 2025-10-11 19:42:53,911 | INFO     | summary of transferred files:
[2025-10-11 19:44:01] 2025-10-11 19:42:53,911 | INFO     |  -- lfn=log.46676269._003544.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 19:44:01] 2025-10-11 19:42:53,912 | INFO     | stage-out finished correctly
[2025-10-11 19:44:01] 2025-10-11 19:42:53,989 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 19:44:01] 2025-10-11 19:42:54,331 | INFO     | time since job start (3245s) is within the limit (172800.0s)
[2025-10-11 19:44:01] 2025-10-11 19:42:55,350 | INFO     | job 6835977255 has state=finished
[2025-10-11 19:44:01] 2025-10-11 19:42:55,351 | INFO     | preparing for final server update for job 6835977255 in state='finished'
[2025-10-11 19:44:01] 2025-10-11 19:42:55,351 | INFO     | this job has now completed (state=finished)
[2025-10-11 19:44:01] 2025-10-11 19:42:55,351 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 19:44:01] 2025-10-11 19:42:55,351 | INFO     | log transfer has been attempted: DONE
[2025-10-11 19:44:01] 2025-10-11 19:42:55,352 | INFO     | job 6835977255 has finished - writing final server update
[2025-10-11 19:44:01] 2025-10-11 19:42:55,352 | INFO     | total number of processed events: 400 (read)
[2025-10-11 19:44:01] 2025-10-11 19:42:55,354 | INFO     | executing command: lscpu
[2025-10-11 19:44:01] 2025-10-11 19:42:55,510 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 19:44:01] 2025-10-11 19:42:56,337 | INFO     | time since job start (3247s) is within the limit (172800.0s)
[2025-10-11 19:44:01] 2025-10-11 19:42:58,343 | INFO     | time since job start (3249s) is within the limit (172800.0s)
[2025-10-11 19:44:01] 2025-10-11 19:42:58,976 | WARNING  | process 3425417 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 19:44:01] 2025-10-11 19:42:58,977 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-6835977255/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 19:44:01] 2025-10-11 19:42:59,632 | INFO     | number of running child processes to parent process 3425417: 1
[2025-10-11 19:44:01] 2025-10-11 19:42:59,632 | INFO     | maximum number of monitored processes: 6
[2025-10-11 19:44:01] 2025-10-11 19:43:00,349 | INFO     | time since job start (3251s) is within the limit (172800.0s)
[2025-10-11 19:44:01] 2025-10-11 19:43:01,212 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 19:44:01] 2025-10-11 19:43:01,264 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2267.8916171875007
[2025-10-11 19:44:01] 2025-10-11 19:43:01,340 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-6835977255/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 19:44:01] 2025-10-11 19:43:01,341 | INFO     | extracted standard info from prmon json
[2025-10-11 19:44:01] 2025-10-11 19:43:01,341 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 19:44:01] 2025-10-11 19:43:01,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:44:01] 2025-10-11 19:43:01,341 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:44:01] 2025-10-11 19:43:01,341 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:44:01] 2025-10-11 19:43:01,342 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:44:01] 2025-10-11 19:43:01,343 | INFO     | sum of square deviations: 30168007.5
[2025-10-11 19:44:01] 2025-10-11 19:43:01,343 | INFO     | sum of deviations: 819739502.5
[2025-10-11 19:44:01] 2025-10-11 19:43:01,343 | INFO     | mean x: 1760210236.5
[2025-10-11 19:44:01] 2025-10-11 19:43:01,343 | INFO     | mean y: 2650888.152173913
[2025-10-11 19:44:01] 2025-10-11 19:43:01,343 | INFO     | -- intersect: -47826622011.754036
[2025-10-11 19:44:01] 2025-10-11 19:43:01,343 | INFO     | intersect: -47826622011.754036
[2025-10-11 19:44:01] 2025-10-11 19:43:01,343 | INFO     | chi2: 0.03671369601266608
[2025-10-11 19:44:01] 2025-10-11 19:43:01,343 | INFO     | -- intersect: -47826622011.754036
[2025-10-11 19:44:01] 2025-10-11 19:43:01,343 | INFO     | current memory leak: 27.17 B/s (using 46 data points, chi2=0.04)
[2025-10-11 19:44:01] 2025-10-11 19:43:01,343 | INFO     | could have reported an average CPU frequency of 2292 MHz (5 samples)
[2025-10-11 19:44:01] 2025-10-11 19:43:01,344 | INFO     | ..............................
[2025-10-11 19:44:01] 2025-10-11 19:43:01,344 | INFO     | . Timing measurements:
[2025-10-11 19:44:01] 2025-10-11 19:43:01,344 | INFO     | . get job = 0 s
[2025-10-11 19:44:01] 2025-10-11 19:43:01,344 | INFO     | . initial setup = 1 s
[2025-10-11 19:44:01] 2025-10-11 19:43:01,344 | INFO     | . payload setup = 6 s
[2025-10-11 19:44:01] 2025-10-11 19:43:01,344 | INFO     | . stage-in = 0 s
[2025-10-11 19:44:01] 2025-10-11 19:43:01,344 | INFO     | . payload execution = 3215 s
[2025-10-11 19:44:01] 2025-10-11 19:43:01,344 | INFO     | . stage-out = 0 s
[2025-10-11 19:44:01] 2025-10-11 19:43:01,344 | INFO     | . log creation = 0 s
[2025-10-11 19:44:01] 2025-10-11 19:43:01,344 | INFO     | ..............................
[2025-10-11 19:44:01] 2025-10-11 19:43:01,724 | INFO     | 
[2025-10-11 19:44:01] 2025-10-11 19:43:01,724 | INFO     | job summary report
[2025-10-11 19:44:01] 2025-10-11 19:43:01,724 | INFO     | --------------------------------------------------
[2025-10-11 19:44:01] 2025-10-11 19:43:01,724 | INFO     | PanDA job id: 6835977255
[2025-10-11 19:44:01] 2025-10-11 19:43:01,724 | INFO     | task id: 46676269
[2025-10-11 19:44:01] 2025-10-11 19:43:01,724 | INFO     | errors: (none)
[2025-10-11 19:44:01] 2025-10-11 19:43:01,724 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:44:01] 2025-10-11 19:43:01,724 | INFO     | pilot state: finished 
[2025-10-11 19:44:01] 2025-10-11 19:43:01,724 | INFO     | transexitcode: 0
[2025-10-11 19:44:01] 2025-10-11 19:43:01,724 | INFO     | exeerrorcode: 0
[2025-10-11 19:44:01] 2025-10-11 19:43:01,724 | INFO     | exeerrordiag: 
[2025-10-11 19:44:01] 2025-10-11 19:43:01,725 | INFO     | exitcode: 0
[2025-10-11 19:44:01] 2025-10-11 19:43:01,725 | INFO     | exitmsg: OK
[2025-10-11 19:44:01] 2025-10-11 19:43:01,725 | INFO     | cpuconsumptiontime: 33909 s
[2025-10-11 19:44:01] 2025-10-11 19:43:01,725 | INFO     | nevents: 400
[2025-10-11 19:44:01] 2025-10-11 19:43:01,725 | INFO     | neventsw: 0
[2025-10-11 19:44:01] 2025-10-11 19:43:01,725 | INFO     | pid: 3425417
[2025-10-11 19:44:01] 2025-10-11 19:43:01,725 | INFO     | pgrp: 3425417
[2025-10-11 19:44:01] 2025-10-11 19:43:01,725 | INFO     | corecount: 12
[2025-10-11 19:44:01] 2025-10-11 19:43:01,725 | INFO     | event service: False
[2025-10-11 19:44:01] 2025-10-11 19:43:01,725 | INFO     | sizes: {0: 2348853, 6: 2349115, 11: 2349143, 3225: 2374884, 3226: 2374883, 3227: 2384123, 3235: 2384293}
[2025-10-11 19:44:01] 2025-10-11 19:43:01,725 | INFO     | --------------------------------------------------
[2025-10-11 19:44:01] 2025-10-11 19:43:01,725 | INFO     | 
[2025-10-11 19:44:01] 2025-10-11 19:43:01,725 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-10-11 19:44:01] 2025-10-11 19:43:01,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,753 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,753 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,753 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,753 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,753 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,753 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,753 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,753 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,753 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,754 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,754 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,754 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,754 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,754 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,754 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:44:01] 2025-10-11 19:43:01,754 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,754 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:44:01] 2025-10-11 19:43:01,754 | INFO     | job 6835977255 has completed (purged errors)
[2025-10-11 19:44:01] 2025-10-11 19:43:01,755 | INFO     | overall cleanup function is called
[2025-10-11 19:44:01] 2025-10-11 19:43:02,764 | INFO     | --- collectZombieJob: --- 10, [3425417]
[2025-10-11 19:44:01] 2025-10-11 19:43:02,765 | INFO     | zombie collector waiting for pid 3425417
[2025-10-11 19:44:01] 2025-10-11 19:43:02,765 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:44:01] 2025-10-11 19:43:02,765 | INFO     | collected zombie processes
[2025-10-11 19:44:01] 2025-10-11 19:43:02,765 | INFO     | will attempt to kill all subprocesses of pid=3425417
[2025-10-11 19:44:01] 2025-10-11 19:43:03,433 | INFO     | process IDs to be killed: [3425417] (in reverse order)
[2025-10-11 19:44:01] 2025-10-11 19:43:03,630 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:44:01] 2025-10-11 19:43:03,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:44:01] 2025-10-11 19:43:03,652 | INFO     | did not find any defunct processes belonging to 3425417
[2025-10-11 19:44:01] 2025-10-11 19:43:03,670 | INFO     | did not find any defunct processes belonging to 3425417
[2025-10-11 19:44:01] 2025-10-11 19:43:03,670 | INFO     | ready for new job
[2025-10-11 19:44:01] 2025-10-11 19:43:03,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:44:01] 2025-10-11 19:43:03,672 | INFO     | ***************************************
[2025-10-11 19:44:01] 2025-10-11 19:43:03,672 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:44:01] 2025-10-11 19:43:03,672 | INFO     | ***************************************
[2025-10-11 19:44:01] 2025-10-11 19:43:03,672 | INFO     | 
[2025-10-11 19:44:01] 2025-10-11 19:43:03,703 | INFO     | architecture information:
[2025-10-11 19:44:01] 2025-10-11 19:43:03,704 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:44:01] 2025-10-11 19:43:03,725 | INFO     | cat /etc/os-release:
[2025-10-11 19:44:01] NAME="CentOS Linux"
[2025-10-11 19:44:01] VERSION="7 (Core)"
[2025-10-11 19:44:01] ID="centos"
[2025-10-11 19:44:01] ID_LIKE="rhel fedora"
[2025-10-11 19:44:01] VERSION_ID="7"
[2025-10-11 19:44:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:44:01] ANSI_COLOR="0;31"
[2025-10-11 19:44:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:44:01] HOME_URL="https://www.centos.org/"
[2025-10-11 19:44:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:44:01] 
[2025-10-11 19:44:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:44:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:44:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:44:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:44:01] 
[2025-10-11 19:44:01] 2025-10-11 19:43:03,726 | INFO     | ***************************************
[2025-10-11 19:44:01] 2025-10-11 19:43:04,227 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-10-11 19:44:01] 2025-10-11 19:43:04,252 | INFO     | sufficient remaining disk space (1724683124736 B)
[2025-10-11 19:44:01] 2025-10-11 19:43:04,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:44:01] 2025-10-11 19:43:04,252 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:44:01] 2025-10-11 19:43:04,252 | INFO     | update_server=False
[2025-10-11 19:44:01] 2025-10-11 19:43:04,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:44:01] 2025-10-11 19:43:04,502 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:44:01] 2025-10-11 19:43:04,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:44:01] 2025-10-11 19:43:04,643 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 19:44:01] 2025-10-11 19:43:04,643 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 19:44:01] 2025-10-11 19:43:04,643 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:44:01] 2025-10-11 19:43:04,644 | INFO     | will abort loop
[2025-10-11 19:44:01] 2025-10-11 19:43:04,958 | INFO     | all payload control threads have been joined
[2025-10-11 19:44:01] 2025-10-11 19:43:05,254 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:05,278 | INFO     | all data control threads have been joined
[2025-10-11 19:44:01] 2025-10-11 19:43:05,649 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:05,650 | INFO     | all job control threads have been joined
[2025-10-11 19:44:01] 2025-10-11 19:43:05,728 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:05,889 | INFO     | [job] validate thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:05,959 | INFO     | [payload] control thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:06,101 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:06,106 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:06,149 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:06,282 | INFO     | [data] control thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:06,418 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:44:01] 2025-10-11 19:43:06,508 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:06,656 | INFO     | [job] control thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:06,672 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:06,675 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:07,422 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:08,597 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:15,138 | INFO     | job.realtimelogging is not enabled
[2025-10-11 19:44:01] 2025-10-11 19:43:16,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:44:01] 2025-10-11 19:43:34,413 | INFO     | PID=3406210 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 19:44:01] 2025-10-11 19:43:34,414 | INFO     | .. there are 16 such processes running
[2025-10-11 19:44:01] 2025-10-11 19:43:34,414 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:44:01] 2025-10-11 19:43:34,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:44:01] 2025-10-11 19:43:34,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:44:01] 2025-10-11 19:43:53,623 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:44:01] 2025-10-11 19:43:55,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139917472917312)>', '<ExcThread(monitor, started 139917174744832)>']
[2025-10-11 19:44:01] 2025-10-11 19:43:56,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:44:01] 2025-10-11 19:43:56,503 | INFO     | [monitor] control thread has ended
[2025-10-11 19:44:01] 2025-10-11 19:44:00,578 | INFO     | all workflow threads have been joined
[2025-10-11 19:44:01] 2025-10-11 19:44:00,579 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:44:01] 2025-10-11 19:44:00,579 | INFO     | traces error code: 0
[2025-10-11 19:44:01] 2025-10-11 19:44:00,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:44:01] 2025-10-11 19:44:00,740 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:44:01] 2025-10-11 19:44:00,744 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:44:01] 2025-10-11 19:44:00,748 [wrapper] pilotpid: 3406210
[2025-10-11 19:44:01] 2025-10-11 19:44:00,752 [wrapper] Pilot exit status: 0
[2025-10-11 19:44:01] 2025-10-11 19:44:00,765 [wrapper] pandaids: 6835977255
[2025-10-11 19:44:01] 2025-10-11 19:44:00,946 [wrapper] cleanup supervisor_pilot 3762990 3406211
[2025-10-11 19:44:01] 2025-10-11 19:44:00,950 [wrapper] Test setup, not cleaning
[2025-10-11 19:44:01] 2025-10-11 19:44:00,954 [wrapper] apfmon messages muted
[2025-10-11 19:44:01] 2025-10-11 19:44:00,957 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:44:01] 2025-10-11 19:44:00,961 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:44:01]  *** Error codes and diagnostics ***
[2025-10-11 19:44:01]     "exeErrorCode": 0,
[2025-10-11 19:44:01]     "exeErrorDiag": "",
[2025-10-11 19:44:01]     "pilotErrorCode": 0,
[2025-10-11 19:44:01]     "pilotErrorDiag": "",
[2025-10-11 19:44:01]  *** Listing of results directory ***
[2025-10-11 19:44:01] total 406028
[2025-10-11 19:44:01] -rw-r--r-- 1 boinc boinc    557409 Oct  8 09:48 pilot3.tar.gz
[2025-10-11 19:44:01] -rwx------ 1 boinc boinc     36292 Oct  8 09:53 runpilot2-wrapper.sh
[2025-10-11 19:44:01] -rw-r--r-- 1 boinc boinc      5112 Oct  8 09:53 queuedata.json
[2025-10-11 19:44:01] -rw-r--r-- 1 boinc boinc       100 Oct 11 18:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:44:01] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 18:48 run_atlas
[2025-10-11 19:44:01] -rw-r--r-- 1 boinc boinc       105 Oct 11 18:48 job.xml
[2025-10-11 19:44:01] -rw-r--r-- 2 boinc boinc     15120 Oct 11 18:48 start_atlas.sh
[2025-10-11 19:44:01] drwxrwx--x 2 boinc boinc      4096 Oct 11 18:48 shared
[2025-10-11 19:44:01] -rw-r--r-- 2 boinc boinc    569677 Oct 11 18:48 input.tar.gz
[2025-10-11 19:44:01] -rw-r--r-- 2 boinc boinc 218010669 Oct 11 18:48 EVNT.46676267._000142.pool.root.1
[2025-10-11 19:44:01] -rw-r--r-- 1 boinc boinc         0 Oct 11 18:48 boinc_setup_complete
[2025-10-11 19:44:01] -rw-r--r-- 1 boinc boinc      9396 Oct 11 18:48 init_data.xml
[2025-10-11 19:44:01] -rw-r--r-- 1 boinc boinc         0 Oct 11 18:48 boinc_lockfile
[2025-10-11 19:44:01] -rw-r--r-- 1 boinc boinc      2548 Oct 11 18:48 pandaJob.out
[2025-10-11 19:44:01] -rw------- 1 boinc boinc    975520 Oct 11 18:48 agis_schedconf.cvmfs.json
[2025-10-11 19:44:01] -rw------- 1 boinc boinc   1560580 Oct 11 18:48 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:44:01] drwx------ 5 boinc boinc      4096 Oct 11 18:48 pilot3
[2025-10-11 19:44:01] -rw------- 1 boinc boinc 192150934 Oct 11 19:42 HITS.46676269._003544.pool.root.1
[2025-10-11 19:44:01] -rw-r--r-- 1 boinc boinc       529 Oct 11 19:42 boinc_task_state.xml
[2025-10-11 19:44:01] -rw------- 1 boinc boinc        95 Oct 11 19:42 pilot_heartbeat.json
[2025-10-11 19:44:01] -rw------- 1 boinc boinc      1028 Oct 11 19:42 memory_monitor_summary.json
[2025-10-11 19:44:01] -rw------- 1 boinc boinc    365296 Oct 11 19:42 log.46676269._003544.job.log.tgz.1
[2025-10-11 19:44:01] -rw------- 1 boinc boinc      7741 Oct 11 19:43 heartbeat.json
[2025-10-11 19:44:01] -rw-r--r-- 1 boinc boinc        27 Oct 11 19:43 wrapper_checkpoint.txt
[2025-10-11 19:44:01] -rw-r--r-- 1 boinc boinc      8192 Oct 11 19:43 boinc_mmap_file
[2025-10-11 19:44:01] -rw------- 1 boinc boinc      5085 Oct 11 19:44 pilotlog.txt
[2025-10-11 19:44:01] -rw------- 1 boinc boinc    481246 Oct 11 19:44 log.46676269._003544.job.log.1
[2025-10-11 19:44:01] -rw------- 1 boinc boinc       357 Oct 11 19:44 output.list
[2025-10-11 19:44:01] -rw-r--r-- 1 boinc boinc       620 Oct 11 19:44 runtime_log
[2025-10-11 19:44:01] -rw------- 1 boinc boinc    870400 Oct 11 19:44 result.tar.gz
[2025-10-11 19:44:01] -rw-r--r-- 1 boinc boinc      8672 Oct 11 19:44 runtime_log.err
[2025-10-11 19:44:01] -rw------- 1 boinc boinc       643 Oct 11 19:44 DLeMDmN2fQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2JMMDm7b62on.diag
[2025-10-11 19:44:01] -rw-r--r-- 1 boinc boinc     21600 Oct 11 19:44 stderr.txt
[2025-10-11 19:44:01] HITS file was successfully produced:
[2025-10-11 19:44:01] -rw------- 1 boinc boinc 192150934 Oct 11 19:42 shared/HITS.pool.root.1
[2025-10-11 19:44:01]  *** Contents of shared directory: ***
[2025-10-11 19:44:01] total 401988
[2025-10-11 19:44:01] -rw-r--r-- 2 boinc boinc     15120 Oct 11 18:48 start_atlas.sh
[2025-10-11 19:44:01] -rw-r--r-- 2 boinc boinc    569677 Oct 11 18:48 input.tar.gz
[2025-10-11 19:44:01] -rw-r--r-- 2 boinc boinc 218010669 Oct 11 18:48 ATLAS.root_0
[2025-10-11 19:44:01] -rw------- 1 boinc boinc 192150934 Oct 11 19:42 HITS.pool.root.1
[2025-10-11 19:44:01] -rw------- 1 boinc boinc    870400 Oct 11 19:44 result.tar.gz
19:44:02 (3397594): run_atlas exited; CPU time 34108.851061
19:44:02 (3397594): called boinc_finish(0)

</stderr_txt>
]]>

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