Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:22:19 (9541): wrapper (7.7.26015): starting
14:22:19 (9541): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 14:22:19] Arguments: --nthreads 8
[2025-10-11 14:22:19] Threads: 8
[2025-10-11 14:22:19] Checking for CVMFS
[2025-10-11 14:22:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:22:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:22:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:22:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:22:20] 2.11.2.0 2840 1749 70220 151593 2 56 10583075 20275200 1 130560 0 1215544 99.990 62453 36564 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 14:22:20] CVMFS is ok
[2025-10-11 14:22:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:22:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:22:20] Further information can be found at the LHC@home message board.
[2025-10-11 14:22:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:22:20] Checking for apptainer binary...
[2025-10-11 14:22:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:22:20] Running /usr/bin/apptainer --version
[2025-10-11 14:22:20] apptainer version 1.3.2-1.el7
[2025-10-11 14:22:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:22:21] c-204-39.aglt2.org
[2025-10-11 14:22:21] apptainer works
[2025-10-11 14:22:21] Set ATHENA_PROC_NUMBER=8
[2025-10-11 14:22:21] Set ATHENA_CORE_NUMBER=8
[2025-10-11 14:22:21] Starting ATLAS job with PandaID=6838119110
[2025-10-11 14:22:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 16:23:57]  *** The last 200 lines of the pilot log: ***
[2025-10-11 16:23:57] 2025-10-11 20:22:49,228 | INFO     | PID=13806 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 16:23:57] 2025-10-11 20:22:50,229 | INFO     | time since job start (7211s) is within the limit (172800.0s)
[2025-10-11 16:23:57] 2025-10-11 20:22:51,191 | INFO     | monitor loop #536: job 0:6838119110 is in state 'finished'
[2025-10-11 16:23:57] 2025-10-11 20:22:51,191 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 16:23:57] 2025-10-11 20:22:51,302 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 16:23:57] 2025-10-11 20:22:51,306 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-10-11 16:23:57] 2025-10-11 20:22:51,308 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838119110/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 16:23:57] 2025-10-11 20:22:51,308 | INFO     | extracted standard info from prmon json
[2025-10-11 16:23:57] 2025-10-11 20:22:51,309 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 16:23:57] 2025-10-11 20:22:51,309 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 16:23:57] 2025-10-11 20:22:51,309 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 16:23:57] 2025-10-11 20:22:51,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 16:23:57] 2025-10-11 20:22:51,312 | INFO     | fitting pss+swap vs Time
[2025-10-11 16:23:57] 2025-10-11 20:22:51,312 | INFO     | sum of square deviations: 509440249.5
[2025-10-11 16:23:57] 2025-10-11 20:22:51,313 | INFO     | sum of deviations: -4547799947.500006
[2025-10-11 16:23:57] 2025-10-11 20:22:51,313 | INFO     | mean x: 1760210558.5
[2025-10-11 16:23:57] 2025-10-11 20:22:51,313 | INFO     | mean y: 2586303.618644068
[2025-10-11 16:23:57] 2025-10-11 20:22:51,313 | INFO     | -- intersect: 15716078697.26442
[2025-10-11 16:23:57] 2025-10-11 20:22:51,314 | INFO     | intersect: 15716078697.26442
[2025-10-11 16:23:57] 2025-10-11 20:22:51,314 | INFO     | chi2: 1.6290947927962245
[2025-10-11 16:23:57] 2025-10-11 20:22:51,314 | INFO     | sum of square deviations: 447383272.0
[2025-10-11 16:23:57] 2025-10-11 20:22:51,315 | INFO     | sum of deviations: -3514261484.0000014
[2025-10-11 16:23:57] 2025-10-11 20:22:51,315 | INFO     | mean x: 1760210406.0
[2025-10-11 16:23:57] 2025-10-11 20:22:51,315 | INFO     | mean y: 2588845.1415929203
[2025-10-11 16:23:57] 2025-10-11 20:22:51,315 | INFO     | -- intersect: 13829300795.922365
[2025-10-11 16:23:57] 2025-10-11 20:22:51,316 | INFO     | intersect: 13829300795.922365
[2025-10-11 16:23:57] 2025-10-11 20:22:51,316 | INFO     | chi2: 1.631131388720382
[2025-10-11 16:23:57] 2025-10-11 20:22:51,316 | INFO     | current chi2=1.631131388720382 (change=-0.12501396070770268 %)
[2025-10-11 16:23:57] 2025-10-11 20:22:51,316 | INFO     | right removable region: 112
[2025-10-11 16:23:57] 2025-10-11 20:22:51,317 | INFO     | sum of square deviations: 447383272.0
[2025-10-11 16:23:57] 2025-10-11 20:22:51,317 | INFO     | sum of deviations: -22930185540.999996
[2025-10-11 16:23:57] 2025-10-11 20:22:51,317 | INFO     | mean x: 1760210711.0
[2025-10-11 16:23:57] 2025-10-11 20:22:51,317 | INFO     | mean y: 2630628.3628318585
[2025-10-11 16:23:57] 2025-10-11 20:22:51,318 | INFO     | -- intersect: 90220483464.14236
[2025-10-11 16:23:57] 2025-10-11 20:22:51,318 | INFO     | intersect: 90220483464.14236
[2025-10-11 16:23:57] 2025-10-11 20:22:51,318 | INFO     | chi2: 0.1180712525919746
[2025-10-11 16:23:57] 2025-10-11 20:22:51,318 | INFO     | current chi2=0.1180712525919746 (change=92.75233994276579 %)
[2025-10-11 16:23:57] 2025-10-11 20:22:51,318 | INFO     | sum of square deviations: 390582207.0
[2025-10-11 16:23:57] 2025-10-11 20:22:51,319 | INFO     | sum of deviations: -22207796182.5
[2025-10-11 16:23:57] 2025-10-11 20:22:51,319 | INFO     | mean x: 1760210863.5
[2025-10-11 16:23:57] 2025-10-11 20:22:51,319 | INFO     | mean y: 2628576.027777778
[2025-10-11 16:23:57] 2025-10-11 20:22:51,319 | INFO     | -- intersect: 100085027093.5576
[2025-10-11 16:23:57] 2025-10-11 20:22:51,319 | INFO     | intersect: 100085027093.5576
[2025-10-11 16:23:57] 2025-10-11 20:22:51,320 | INFO     | chi2: 0.09674601345330508
[2025-10-11 16:23:57] 2025-10-11 20:22:51,320 | INFO     | current chi2=0.09674601345330508 (change=18.061330485215002 %)
[2025-10-11 16:23:57] 2025-10-11 20:22:51,320 | INFO     | left removable region: 20
[2025-10-11 16:23:57] 2025-10-11 20:22:51,320 | INFO     | sum of square deviations: 241429643.0
[2025-10-11 16:23:57] 2025-10-11 20:22:51,321 | INFO     | sum of deviations: -15710605296.5
[2025-10-11 16:23:57] 2025-10-11 20:22:51,321 | INFO     | mean x: 1760210985.5
[2025-10-11 16:23:57] 2025-10-11 20:22:51,321 | INFO     | mean y: 2618597.336956522
[2025-10-11 16:23:57] 2025-10-11 20:22:51,321 | INFO     | -- intersect: 114545222761.95392
[2025-10-11 16:23:57] 2025-10-11 20:22:51,321 | INFO     | intersect: 114545222761.95392
[2025-10-11 16:23:57] 2025-10-11 20:22:51,321 | INFO     | chi2: 0.08859340084057388
[2025-10-11 16:23:57] 2025-10-11 20:22:51,322 | INFO     | -- intersect: 114545222761.95392
[2025-10-11 16:23:57] 2025-10-11 20:22:51,322 | INFO     | current memory leak: -65.07 B/s (using 92 data points, chi2=0.09)
[2025-10-11 16:23:57] 2025-10-11 20:22:51,322 | INFO     | could have reported an average CPU frequency of 1959 MHz (7 samples)
[2025-10-11 16:23:57] 2025-10-11 20:22:51,322 | INFO     | ..............................
[2025-10-11 16:23:57] 2025-10-11 20:22:51,322 | INFO     | . Timing measurements:
[2025-10-11 16:23:57] 2025-10-11 20:22:51,322 | INFO     | . get job = 0 s
[2025-10-11 16:23:57] 2025-10-11 20:22:51,323 | INFO     | . initial setup = 2 s
[2025-10-11 16:23:57] 2025-10-11 20:22:51,323 | INFO     | . payload setup = 8 s
[2025-10-11 16:23:57] 2025-10-11 20:22:51,323 | INFO     | . stage-in = 0 s
[2025-10-11 16:23:57] 2025-10-11 20:22:51,323 | INFO     | . payload execution = 7174 s
[2025-10-11 16:23:57] 2025-10-11 20:22:51,323 | INFO     | . stage-out = 0 s
[2025-10-11 16:23:57] 2025-10-11 20:22:51,323 | INFO     | . log creation = 0 s
[2025-10-11 16:23:57] 2025-10-11 20:22:51,323 | INFO     | ..............................
[2025-10-11 16:23:57] 2025-10-11 20:22:51,419 | INFO     | 
[2025-10-11 16:23:57] 2025-10-11 20:22:51,419 | INFO     | job summary report
[2025-10-11 16:23:57] 2025-10-11 20:22:51,419 | INFO     | --------------------------------------------------
[2025-10-11 16:23:57] 2025-10-11 20:22:51,420 | INFO     | PanDA job id: 6838119110
[2025-10-11 16:23:57] 2025-10-11 20:22:51,420 | INFO     | task id: 46676269
[2025-10-11 16:23:57] 2025-10-11 20:22:51,420 | INFO     | errors: (none)
[2025-10-11 16:23:57] 2025-10-11 20:22:51,420 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 16:23:57] 2025-10-11 20:22:51,420 | INFO     | pilot state: finished 
[2025-10-11 16:23:57] 2025-10-11 20:22:51,421 | INFO     | transexitcode: 0
[2025-10-11 16:23:57] 2025-10-11 20:22:51,421 | INFO     | exeerrorcode: 0
[2025-10-11 16:23:57] 2025-10-11 20:22:51,421 | INFO     | exeerrordiag: 
[2025-10-11 16:23:57] 2025-10-11 20:22:51,421 | INFO     | exitcode: 0
[2025-10-11 16:23:57] 2025-10-11 20:22:51,421 | INFO     | exitmsg: OK
[2025-10-11 16:23:57] 2025-10-11 20:22:51,421 | INFO     | cpuconsumptiontime: 53367 s
[2025-10-11 16:23:57] 2025-10-11 20:22:51,422 | INFO     | nevents: 400
[2025-10-11 16:23:57] 2025-10-11 20:22:51,422 | INFO     | neventsw: 0
[2025-10-11 16:23:57] 2025-10-11 20:22:51,422 | INFO     | pid: 20275
[2025-10-11 16:23:57] 2025-10-11 20:22:51,422 | INFO     | pgrp: 20275
[2025-10-11 16:23:57] 2025-10-11 20:22:51,422 | INFO     | corecount: 8
[2025-10-11 16:23:57] 2025-10-11 20:22:51,422 | INFO     | event service: False
[2025-10-11 16:23:57] 2025-10-11 20:22:51,423 | INFO     | sizes: {0: 2348629, 1: 2348884, 7: 2349146, 12: 2349174, 7186: 2376456, 7188: 2385454, 7189: 2385638, 7196: 2385832}
[2025-10-11 16:23:57] 2025-10-11 20:22:51,423 | INFO     | --------------------------------------------------
[2025-10-11 16:23:57] 2025-10-11 20:22:51,423 | INFO     | 
[2025-10-11 16:23:57] 2025-10-11 20:22:51,423 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 16:23:57] 2025-10-11 20:22:51,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,452 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,452 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,452 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,454 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,454 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,454 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,454 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,454 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,455 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,455 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 16:23:57] 2025-10-11 20:22:51,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,455 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 16:23:57] 2025-10-11 20:22:51,456 | INFO     | job 6838119110 has completed (purged errors)
[2025-10-11 16:23:57] 2025-10-11 20:22:51,456 | INFO     | overall cleanup function is called
[2025-10-11 16:23:57] 2025-10-11 20:22:52,463 | INFO     | --- collectZombieJob: --- 10, [20275]
[2025-10-11 16:23:57] 2025-10-11 20:22:52,463 | INFO     | zombie collector waiting for pid 20275
[2025-10-11 16:23:57] 2025-10-11 20:22:52,464 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 16:23:57] 2025-10-11 20:22:52,464 | INFO     | collected zombie processes
[2025-10-11 16:23:57] 2025-10-11 20:22:52,464 | INFO     | will attempt to kill all subprocesses of pid=20275
[2025-10-11 16:23:57] 2025-10-11 20:22:52,555 | INFO     | process IDs to be killed: [20275] (in reverse order)
[2025-10-11 16:23:57] 2025-10-11 20:22:52,611 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 16:23:57] 2025-10-11 20:22:52,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 16:23:57] 2025-10-11 20:22:52,616 | INFO     | did not find any defunct processes belonging to 20275
[2025-10-11 16:23:57] 2025-10-11 20:22:52,619 | INFO     | did not find any defunct processes belonging to 20275
[2025-10-11 16:23:57] 2025-10-11 20:22:52,619 | INFO     | ready for new job
[2025-10-11 16:23:57] 2025-10-11 20:22:52,620 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 16:23:57] 2025-10-11 20:22:52,621 | INFO     | ***************************************
[2025-10-11 16:23:57] 2025-10-11 20:22:52,622 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 16:23:57] 2025-10-11 20:22:52,622 | INFO     | ***************************************
[2025-10-11 16:23:57] 2025-10-11 20:22:52,622 | INFO     | 
[2025-10-11 16:23:57] 2025-10-11 20:22:52,622 | INFO     | architecture information:
[2025-10-11 16:23:57] 2025-10-11 20:22:52,623 | INFO     | executing command: cat /etc/os-release
[2025-10-11 16:23:57] 2025-10-11 20:22:52,642 | INFO     | cat /etc/os-release:
[2025-10-11 16:23:57] NAME="CentOS Linux"
[2025-10-11 16:23:57] VERSION="7 (Core)"
[2025-10-11 16:23:57] ID="centos"
[2025-10-11 16:23:57] ID_LIKE="rhel fedora"
[2025-10-11 16:23:57] VERSION_ID="7"
[2025-10-11 16:23:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 16:23:57] ANSI_COLOR="0;31"
[2025-10-11 16:23:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 16:23:57] HOME_URL="https://www.centos.org/"
[2025-10-11 16:23:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 16:23:57] 
[2025-10-11 16:23:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 16:23:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 16:23:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 16:23:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 16:23:57] 
[2025-10-11 16:23:57] 2025-10-11 20:22:52,642 | INFO     | ***************************************
[2025-10-11 16:23:57] 2025-10-11 20:22:53,146 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 16:23:57] 2025-10-11 20:22:53,166 | INFO     | sufficient remaining disk space (18556649472 B)
[2025-10-11 16:23:57] 2025-10-11 20:22:53,166 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 16:23:57] 2025-10-11 20:22:53,166 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 16:23:57] 2025-10-11 20:22:53,167 | INFO     | update_server=False
[2025-10-11 16:23:57] 2025-10-11 20:22:53,167 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 16:23:57] 2025-10-11 20:22:53,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 16:23:57] 2025-10-11 20:22:53,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 16:23:57] 2025-10-11 20:22:53,168 | INFO     | aborting loop
[2025-10-11 16:23:57] 2025-10-11 20:22:53,646 | INFO     | all job control threads have been joined
[2025-10-11 16:23:57] 2025-10-11 20:22:54,111 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 16:23:57] 2025-10-11 20:22:54,172 | INFO     | [job] retrieve thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:54,174 | INFO     | [job] queue monitor thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:54,174 | INFO     | [job] job monitor thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:54,232 | INFO     | all data control threads have been joined
[2025-10-11 16:23:57] 2025-10-11 20:22:54,291 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:54,342 | INFO     | all payload control threads have been joined
[2025-10-11 16:23:57] 2025-10-11 20:22:54,426 | INFO     | [payload] validate_post thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:54,652 | INFO     | [job] control thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:54,775 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:54,883 | INFO     | [payload] failed_post thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:54,931 | INFO     | [job] validate thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:55,238 | INFO     | [data] control thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:55,244 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 16:23:57] 2025-10-11 20:22:55,348 | INFO     | [payload] control thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:55,422 | INFO     | [data] copytool_in thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:55,425 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:55,426 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:56,117 | INFO     | [data] copytool_out thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:22:59,250 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 16:23:57] 2025-10-11 20:23:23,444 | INFO     | PID=13806 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 16:23:57] 2025-10-11 20:23:23,445 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 16:23:57] 2025-10-11 20:23:23,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 16:23:57] 2025-10-11 20:23:23,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 16:23:57] 2025-10-11 20:23:50,568 | INFO     | [monitor] cgroup control has ended
[2025-10-11 16:23:57] 2025-10-11 20:23:51,863 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139625757595456)>', '<ExcThread(monitor, started 139624840140544)>']
[2025-10-11 16:23:57] 2025-10-11 20:23:52,578 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 16:23:57] 2025-10-11 20:23:52,578 | INFO     | [monitor] control thread has ended
[2025-10-11 16:23:57] 2025-10-11 20:23:56,888 | INFO     | all workflow threads have been joined
[2025-10-11 16:23:57] 2025-10-11 20:23:56,888 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 16:23:57] 2025-10-11 20:23:56,889 | INFO     | traces error code: 0
[2025-10-11 16:23:57] 2025-10-11 20:23:56,889 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 16:23:57] 2025-10-11 20:23:56,997 [wrapper] ==== pilot stdout END ====
[2025-10-11 16:23:57] 2025-10-11 20:23:57,002 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 16:23:57] 2025-10-11 20:23:57,006 [wrapper] pilotpid: 13806
[2025-10-11 16:23:57] 2025-10-11 20:23:57,011 [wrapper] Pilot exit status: 0
[2025-10-11 16:23:57] 2025-10-11 20:23:57,030 [wrapper] pandaids: 6838119110
[2025-10-11 16:23:57] 2025-10-11 20:23:57,084 [wrapper] cleanup supervisor_pilot  6620 13807
[2025-10-11 16:23:57] 2025-10-11 20:23:57,089 [wrapper] Test setup, not cleaning
[2025-10-11 16:23:57] 2025-10-11 20:23:57,094 [wrapper] apfmon messages muted
[2025-10-11 16:23:57] 2025-10-11 20:23:57,098 [wrapper] ==== wrapper stdout END ====
[2025-10-11 16:23:57] 2025-10-11 20:23:57,103 [wrapper] ==== wrapper stderr END ====
[2025-10-11 16:23:57]  *** Error codes and diagnostics ***
[2025-10-11 16:23:57]     "exeErrorCode": 0,
[2025-10-11 16:23:57]     "exeErrorDiag": "",
[2025-10-11 16:23:57]     "pilotErrorCode": 0,
[2025-10-11 16:23:57]     "pilotErrorDiag": "",
[2025-10-11 16:23:57]  *** Listing of results directory ***
[2025-10-11 16:23:57] total 406948
[2025-10-11 16:23:57] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 02:24 pilot3.tar.gz
[2025-10-11 16:23:57] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 02:27 queuedata.json
[2025-10-11 16:23:57] -rwx------ 1 boincer umatlas     36292 Oct 11 02:28 runpilot2-wrapper.sh
[2025-10-11 16:23:57] -rw-r--r-- 1 boincer umatlas       100 Oct 11 14:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 16:23:57] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 14:22 run_atlas
[2025-10-11 16:23:57] -rw-r--r-- 1 boincer umatlas       105 Oct 11 14:22 job.xml
[2025-10-11 16:23:57] -rw-r--r-- 2 boincer umatlas 219987756 Oct 11 14:22 EVNT.46676267._002110.pool.root.1
[2025-10-11 16:23:57] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 14:22 start_atlas.sh
[2025-10-11 16:23:57] drwxrwx--x 2 boincer umatlas      4096 Oct 11 14:22 shared
[2025-10-11 16:23:57] -rw-r--r-- 2 boincer umatlas    569682 Oct 11 14:22 input.tar.gz
[2025-10-11 16:23:57] -rw-r--r-- 1 boincer umatlas         0 Oct 11 14:22 boinc_lockfile
[2025-10-11 16:23:57] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 14:22 pandaJob.out
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas    975520 Oct 11 14:22 agis_schedconf.cvmfs.json
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas   1560580 Oct 11 14:22 agis_ddmendpoints.agis.ALL.json
[2025-10-11 16:23:57] drwx------ 5 boincer umatlas      4096 Oct 11 14:22 pilot3
[2025-10-11 16:23:57] -rw-r--r-- 1 boincer umatlas      5909 Oct 11 16:20 init_data.xml
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas 190082475 Oct 11 16:22 HITS.46676269._052498.pool.root.1
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas      1051 Oct 11 16:22 memory_monitor_summary.json
[2025-10-11 16:23:57] -rw-r--r-- 1 boincer umatlas       529 Oct 11 16:22 boinc_task_state.xml
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas    354970 Oct 11 16:22 log.46676269._052498.job.log.tgz.1
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas      7851 Oct 11 16:22 heartbeat.json
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas        95 Oct 11 16:23 pilot_heartbeat.json
[2025-10-11 16:23:57] -rw-r--r-- 1 boincer umatlas        27 Oct 11 16:23 wrapper_checkpoint.txt
[2025-10-11 16:23:57] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 16:23 boinc_mmap_file
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas      4746 Oct 11 16:23 pilotlog.txt
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas   1016014 Oct 11 16:23 log.46676269._052498.job.log.1
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas       357 Oct 11 16:23 output.list
[2025-10-11 16:23:57] -rw-r--r-- 1 boincer umatlas       620 Oct 11 16:23 runtime_log
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas   1392640 Oct 11 16:23 result.tar.gz
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas       659 Oct 11 16:23 zmfLDmoGiR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhafNDmRn8T8n.diag
[2025-10-11 16:23:57] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 16:23 runtime_log.err
[2025-10-11 16:23:57] -rw-r--r-- 1 boincer umatlas     21203 Oct 11 16:23 stderr.txt
[2025-10-11 16:23:57] HITS file was successfully produced:
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas 190082475 Oct 11 16:22 shared/HITS.pool.root.1
[2025-10-11 16:23:57]  *** Contents of shared directory: ***
[2025-10-11 16:23:57] total 402400
[2025-10-11 16:23:57] -rw-r--r-- 2 boincer umatlas 219987756 Oct 11 14:22 ATLAS.root_0
[2025-10-11 16:23:57] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 14:22 start_atlas.sh
[2025-10-11 16:23:57] -rw-r--r-- 2 boincer umatlas    569682 Oct 11 14:22 input.tar.gz
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas 190082475 Oct 11 16:22 HITS.pool.root.1
[2025-10-11 16:23:57] -rw------- 1 boincer umatlas   1392640 Oct 11 16:23 result.tar.gz
16:23:58 (9541): run_atlas exited; CPU time 53380.680804
16:23:58 (9541): called boinc_finish(0)

</stderr_txt>
]]>

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