Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:19:16 (1679956): wrapper (7.7.26015): starting
14:19:16 (1679956): wrapper: running run_atlas (--nthreads 11)
[2025-10-11 14:19:16] Arguments: --nthreads 11
[2025-10-11 14:19:16] Threads: 11
[2025-10-11 14:19:16] Checking for CVMFS
[2025-10-11 14:19:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:19:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:19:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:19:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:19:16] 2.13.2.0 3269412 34638 383396 151593 2 723 21342061 40960001 40902 16776704 0 439931391 99.841 182381673 36840 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 14:19:16] CVMFS is ok
[2025-10-11 14:19:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:19:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:19:16] Further information can be found at the LHC@home message board.
[2025-10-11 14:19:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:19:16] Checking for apptainer binary...
[2025-10-11 14:19:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:19:16] Running /usr/bin/apptainer --version
[2025-10-11 14:19:16] apptainer version 1.4.3-1.el9
[2025-10-11 14:19:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:19:17] c8-16-2.aglt2.org
[2025-10-11 14:19:17] apptainer works
[2025-10-11 14:19:17] Set ATHENA_PROC_NUMBER=11
[2025-10-11 14:19:17] Set ATHENA_CORE_NUMBER=11
[2025-10-11 14:19:17] Starting ATLAS job with PandaID=6838452623
[2025-10-11 14:19:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:17:00]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:17:00] 2025-10-11 19:16:06,043 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 15:17:00] 2025-10-11 19:16:06,044 | INFO     | log transfer has been attempted: DONE
[2025-10-11 15:17:00] 2025-10-11 19:16:06,044 | INFO     | job 6838452623 has finished - writing final server update
[2025-10-11 15:17:00] 2025-10-11 19:16:06,044 | INFO     | total number of processed events: 400 (read)
[2025-10-11 15:17:00] 2025-10-11 19:16:06,054 | INFO     | executing command: lscpu
[2025-10-11 15:17:00] 2025-10-11 19:16:06,186 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 15:17:00] 2025-10-11 19:16:06,316 | INFO     | time since job start (3395s) is within the limit (172800.0s)
[2025-10-11 15:17:00] 2025-10-11 19:16:07,136 | INFO     | monitor loop #209: job 0:6838452623 is in state 'finished'
[2025-10-11 15:17:00] 2025-10-11 19:16:07,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:17:00] 2025-10-11 19:16:08,328 | INFO     | time since job start (3397s) is within the limit (172800.0s)
[2025-10-11 15:17:00] 2025-10-11 19:16:09,642 | INFO     | monitor loop #210: job 0:6838452623 is in state 'finished'
[2025-10-11 15:17:00] 2025-10-11 19:16:09,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:17:00] 2025-10-11 19:16:10,334 | INFO     | time since job start (3399s) is within the limit (172800.0s)
[2025-10-11 15:17:00] 2025-10-11 19:16:12,147 | INFO     | monitor loop #211: job 0:6838452623 is in state 'finished'
[2025-10-11 15:17:00] 2025-10-11 19:16:12,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:17:00] 2025-10-11 19:16:12,342 | INFO     | time since job start (3401s) is within the limit (172800.0s)
[2025-10-11 15:17:00] 2025-10-11 19:16:14,358 | INFO     | time since job start (3403s) is within the limit (172800.0s)
[2025-10-11 15:17:00] 2025-10-11 19:16:14,652 | INFO     | monitor loop #212: job 0:6838452623 is in state 'finished'
[2025-10-11 15:17:00] 2025-10-11 19:16:14,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:17:00] 2025-10-11 19:16:16,365 | INFO     | time since job start (3405s) is within the limit (172800.0s)
[2025-10-11 15:17:00] 2025-10-11 19:16:17,157 | INFO     | monitor loop #213: job 0:6838452623 is in state 'finished'
[2025-10-11 15:17:00] 2025-10-11 19:16:17,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:17:00] 2025-10-11 19:16:18,377 | INFO     | time since job start (3407s) is within the limit (172800.0s)
[2025-10-11 15:17:00] 2025-10-11 19:16:19,661 | INFO     | monitor loop #214: job 0:6838452623 is in state 'finished'
[2025-10-11 15:17:00] 2025-10-11 19:16:19,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:17:00] 2025-10-11 19:16:20,383 | INFO     | time since job start (3409s) is within the limit (172800.0s)
[2025-10-11 15:17:00] 2025-10-11 19:16:22,167 | INFO     | monitor loop #215: job 0:6838452623 is in state 'finished'
[2025-10-11 15:17:00] 2025-10-11 19:16:22,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:17:00] 2025-10-11 19:16:22,399 | INFO     | time since job start (3411s) is within the limit (172800.0s)
[2025-10-11 15:17:00] 2025-10-11 19:16:24,405 | INFO     | time since job start (3413s) is within the limit (172800.0s)
[2025-10-11 15:17:00] 2025-10-11 19:16:24,676 | INFO     | monitor loop #216: job 0:6838452623 is in state 'finished'
[2025-10-11 15:17:00] 2025-10-11 19:16:24,676 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:17:00] 2025-10-11 19:16:26,351 | INFO     | PID=1683881 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 15:17:00] 2025-10-11 19:16:26,351 | INFO     | .. there are 67 such processes running
[2025-10-11 15:17:00] 2025-10-11 19:16:27,179 | INFO     | monitor loop #217: job 0:6838452623 is in state 'finished'
[2025-10-11 15:17:00] 2025-10-11 19:16:27,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:17:00] 2025-10-11 19:16:27,204 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 15:17:00] 2025-10-11 19:16:27,213 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3791.394070312495
[2025-10-11 15:17:00] 2025-10-11 19:16:27,227 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6838452623/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:17:00] 2025-10-11 19:16:27,227 | INFO     | extracted standard info from prmon json
[2025-10-11 15:17:00] 2025-10-11 19:16:27,227 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 15:17:00] 2025-10-11 19:16:27,227 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 15:17:00] 2025-10-11 19:16:27,228 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:17:00] 2025-10-11 19:16:27,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:17:00] 2025-10-11 19:16:27,229 | INFO     | fitting pss+swap vs Time
[2025-10-11 15:17:00] 2025-10-11 19:16:27,229 | INFO     | sum of square deviations: 36465800.0
[2025-10-11 15:17:00] 2025-10-11 19:16:27,229 | INFO     | sum of deviations: 403929068.0000001
[2025-10-11 15:17:00] 2025-10-11 19:16:27,229 | INFO     | mean x: 1760208568.0
[2025-10-11 15:17:00] 2025-10-11 19:16:27,229 | INFO     | mean y: 2325470.102040816
[2025-10-11 15:17:00] 2025-10-11 19:16:27,229 | INFO     | -- intersect: -19495379402.898273
[2025-10-11 15:17:00] 2025-10-11 19:16:27,229 | INFO     | intersect: -19495379402.898273
[2025-10-11 15:17:00] 2025-10-11 19:16:27,229 | INFO     | chi2: 0.011930194326135415
[2025-10-11 15:17:00] 2025-10-11 19:16:27,229 | INFO     | -- intersect: -19495379402.898273
[2025-10-11 15:17:00] 2025-10-11 19:16:27,229 | INFO     | current memory leak: 11.08 B/s (using 49 data points, chi2=0.01)
[2025-10-11 15:17:00] 2025-10-11 19:16:27,230 | INFO     | could have reported an average CPU frequency of 3790 MHz (5 samples)
[2025-10-11 15:17:00] 2025-10-11 19:16:27,230 | INFO     | ..............................
[2025-10-11 15:17:00] 2025-10-11 19:16:27,230 | INFO     | . Timing measurements:
[2025-10-11 15:17:00] 2025-10-11 19:16:27,230 | INFO     | . get job = 0 s
[2025-10-11 15:17:00] 2025-10-11 19:16:27,230 | INFO     | . initial setup = 2 s
[2025-10-11 15:17:00] 2025-10-11 19:16:27,230 | INFO     | . payload setup = 6 s
[2025-10-11 15:17:00] 2025-10-11 19:16:27,230 | INFO     | . stage-in = 0 s
[2025-10-11 15:17:00] 2025-10-11 19:16:27,230 | INFO     | . payload execution = 3364 s
[2025-10-11 15:17:00] 2025-10-11 19:16:27,230 | INFO     | . stage-out = 1 s
[2025-10-11 15:17:00] 2025-10-11 19:16:27,230 | INFO     | . log creation = 0 s
[2025-10-11 15:17:00] 2025-10-11 19:16:27,230 | INFO     | ..............................
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | 
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | job summary report
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | --------------------------------------------------
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | PanDA job id: 6838452623
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | task id: 46676269
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | errors: (none)
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | pilot state: finished 
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | transexitcode: 0
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | exeerrorcode: 0
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | exeerrordiag: 
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | exitcode: 0
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | exitmsg: OK
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | cpuconsumptiontime: 22652 s
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | nevents: 400
[2025-10-11 15:17:00] 2025-10-11 19:16:27,291 | INFO     | neventsw: 0
[2025-10-11 15:17:00] 2025-10-11 19:16:27,292 | INFO     | pid: 1690714
[2025-10-11 15:17:00] 2025-10-11 19:16:27,292 | INFO     | pgrp: 1690714
[2025-10-11 15:17:00] 2025-10-11 19:16:27,292 | INFO     | corecount: 11
[2025-10-11 15:17:00] 2025-10-11 19:16:27,292 | INFO     | event service: False
[2025-10-11 15:17:00] 2025-10-11 19:16:27,292 | INFO     | sizes: {0: 2348686, 1: 2348885, 9: 2349147, 11: 2349175, 3375: 2374884, 3376: 2374883, 3377: 2384121, 3400: 2384291}
[2025-10-11 15:17:00] 2025-10-11 19:16:27,292 | INFO     | --------------------------------------------------
[2025-10-11 15:17:00] 2025-10-11 19:16:27,292 | INFO     | 
[2025-10-11 15:17:00] 2025-10-11 19:16:27,292 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-11 15:17:00] 2025-10-11 19:16:27,318 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,319 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:17:00] 2025-10-11 19:16:27,320 | INFO     | job 6838452623 has completed (purged errors)
[2025-10-11 15:17:00] 2025-10-11 19:16:27,320 | INFO     | overall cleanup function is called
[2025-10-11 15:17:00] 2025-10-11 19:16:28,330 | INFO     | --- collectZombieJob: --- 10, [1690714]
[2025-10-11 15:17:00] 2025-10-11 19:16:28,330 | INFO     | zombie collector waiting for pid 1690714
[2025-10-11 15:17:00] 2025-10-11 19:16:28,330 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:17:00] 2025-10-11 19:16:28,330 | INFO     | collected zombie processes
[2025-10-11 15:17:00] 2025-10-11 19:16:28,330 | INFO     | will attempt to kill all subprocesses of pid=1690714
[2025-10-11 15:17:00] 2025-10-11 19:16:29,214 | INFO     | process IDs to be killed: [1690714] (in reverse order)
[2025-10-11 15:17:00] 2025-10-11 19:16:29,517 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:17:00] 2025-10-11 19:16:29,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:17:00] 2025-10-11 19:16:29,552 | INFO     | did not find any defunct processes belonging to 1690714
[2025-10-11 15:17:00] 2025-10-11 19:16:29,586 | INFO     | did not find any defunct processes belonging to 1690714
[2025-10-11 15:17:00] 2025-10-11 19:16:29,586 | INFO     | ready for new job
[2025-10-11 15:17:00] 2025-10-11 19:16:29,586 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:17:00] 2025-10-11 19:16:29,587 | INFO     | ***************************************
[2025-10-11 15:17:00] 2025-10-11 19:16:29,587 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:17:00] 2025-10-11 19:16:29,587 | INFO     | ***************************************
[2025-10-11 15:17:00] 2025-10-11 19:16:29,588 | INFO     | 
[2025-10-11 15:17:00] 2025-10-11 19:16:29,624 | INFO     | architecture information:
[2025-10-11 15:17:00] 2025-10-11 19:16:29,631 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:17:00] 2025-10-11 19:16:29,687 | INFO     | cat /etc/os-release:
[2025-10-11 15:17:00] NAME="CentOS Linux"
[2025-10-11 15:17:00] VERSION="7 (Core)"
[2025-10-11 15:17:00] ID="centos"
[2025-10-11 15:17:00] ID_LIKE="rhel fedora"
[2025-10-11 15:17:00] VERSION_ID="7"
[2025-10-11 15:17:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:17:00] ANSI_COLOR="0;31"
[2025-10-11 15:17:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:17:00] HOME_URL="https://www.centos.org/"
[2025-10-11 15:17:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:17:00] 
[2025-10-11 15:17:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:17:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:17:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:17:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:17:00] 
[2025-10-11 15:17:00] 2025-10-11 19:16:29,687 | INFO     | ***************************************
[2025-10-11 15:17:00] 2025-10-11 19:16:30,190 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-11 15:17:00] 2025-10-11 19:16:30,243 | INFO     | sufficient remaining disk space (166176227328 B)
[2025-10-11 15:17:00] 2025-10-11 19:16:30,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:17:00] 2025-10-11 19:16:30,244 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:17:00] 2025-10-11 19:16:30,244 | INFO     | update_server=False
[2025-10-11 15:17:00] 2025-10-11 19:16:30,244 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:17:00] 2025-10-11 19:16:30,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:17:00] 2025-10-11 19:16:30,427 | INFO     | all job control threads have been joined
[2025-10-11 15:17:00] 2025-10-11 19:16:30,699 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:17:00] 2025-10-11 19:16:30,700 | INFO     | aborting loop
[2025-10-11 15:17:00] 2025-10-11 19:16:30,703 | INFO     | all payload control threads have been joined
[2025-10-11 15:17:00] 2025-10-11 19:16:31,198 | INFO     | all data control threads have been joined
[2025-10-11 15:17:00] 2025-10-11 19:16:31,250 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:31,433 | INFO     | [job] control thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:31,561 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:31,704 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:31,710 | INFO     | [payload] control thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:31,753 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:32,117 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:32,203 | INFO     | [data] control thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:32,212 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:32,259 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:32,316 | INFO     | [job] validate thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:32,320 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:32,320 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:17:00] 2025-10-11 19:16:32,407 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:32,553 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:32,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:17:00] 2025-10-11 19:16:33,326 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:36,447 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:17:00] 2025-10-11 19:16:36,615 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:17:00] 2025-10-11 19:16:37,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140177533040448)>', '<ExcThread(monitor, started 140177020266240)>']
[2025-10-11 15:17:00] 2025-10-11 19:16:42,780 | INFO     | all workflow threads have been joined
[2025-10-11 15:17:00] 2025-10-11 19:16:42,780 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:17:00] 2025-10-11 19:16:42,780 | INFO     | traces error code: 0
[2025-10-11 15:17:00] 2025-10-11 19:16:42,780 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:17:00] 2025-10-11 19:16:59,377 | INFO     | PID=1683881 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:17:00] 2025-10-11 19:16:59,377 | INFO     | .. there are 67 such processes running
[2025-10-11 15:17:00] 2025-10-11 19:16:59,377 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:17:00] 2025-10-11 19:16:59,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:17:00] 2025-10-11 19:16:59,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:17:00] 2025-10-11 19:16:59,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:17:00] 2025-10-11 19:16:59,378 | INFO     | [monitor] control thread has ended
[2025-10-11 15:17:00] 2025-10-11 19:16:59,591 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:17:00] 2025-10-11 19:16:59,605 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:17:00] 2025-10-11 19:16:59,627 [wrapper] pilotpid: 1683881
[2025-10-11 15:17:00] 2025-10-11 19:16:59,649 [wrapper] Pilot exit status: 0
[2025-10-11 15:17:00] 2025-10-11 19:16:59,765 [wrapper] pandaids: 6838452623
[2025-10-11 15:17:00] 2025-10-11 19:17:00,064 [wrapper] cleanup supervisor_pilot 2360481 1683882
[2025-10-11 15:17:00] 2025-10-11 19:17:00,079 [wrapper] Test setup, not cleaning
[2025-10-11 15:17:00] 2025-10-11 19:17:00,091 [wrapper] apfmon messages muted
[2025-10-11 15:17:00] 2025-10-11 19:17:00,096 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:17:00] 2025-10-11 19:17:00,101 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:17:00]  *** Error codes and diagnostics ***
[2025-10-11 15:17:00]     "exeErrorCode": 0,
[2025-10-11 15:17:00]     "exeErrorDiag": "",
[2025-10-11 15:17:00]     "pilotErrorCode": 0,
[2025-10-11 15:17:00]     "pilotErrorDiag": "",
[2025-10-11 15:17:00]  *** Listing of results directory ***
[2025-10-11 15:17:00] total 416560
[2025-10-11 15:17:00] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 09:40 pilot3.tar.gz
[2025-10-11 15:17:00] -rwx------. 1 boincer umatlas     36292 Oct 11 09:48 runpilot2-wrapper.sh
[2025-10-11 15:17:00] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 09:48 queuedata.json
[2025-10-11 15:17:00] -rw-r--r--. 1 boincer umatlas       100 Oct 11 14:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:17:00] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 14:19 run_atlas
[2025-10-11 15:17:00] -rw-r--r--. 1 boincer umatlas       105 Oct 11 14:19 job.xml
[2025-10-11 15:17:00] -rw-r--r--. 2 boincer umatlas 224137832 Oct 11 14:19 EVNT.46676267._002351.pool.root.1
[2025-10-11 15:17:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 14:19 start_atlas.sh
[2025-10-11 15:17:00] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 14:19 shared
[2025-10-11 15:17:00] -rw-r--r--. 2 boincer umatlas    569674 Oct 11 14:19 input.tar.gz
[2025-10-11 15:17:00] -rw-r--r--. 1 boincer umatlas         0 Oct 11 14:19 boinc_lockfile
[2025-10-11 15:17:00] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 14:19 pandaJob.out
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas    975520 Oct 11 14:19 agis_schedconf.cvmfs.json
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas   1560580 Oct 11 14:19 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:17:00] drwx------. 5 boincer umatlas      4096 Oct 11 14:19 pilot3
[2025-10-11 15:17:00] -rw-r--r--. 1 boincer umatlas      7161 Oct 11 15:12 init_data.xml
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas 196895503 Oct 11 15:15 HITS.46676269._058625.pool.root.1
[2025-10-11 15:17:00] -rw-r--r--. 1 boincer umatlas       529 Oct 11 15:15 boinc_task_state.xml
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas      1036 Oct 11 15:15 memory_monitor_summary.json
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas    339455 Oct 11 15:16 log.46676269._058625.job.log.tgz.1
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas      7773 Oct 11 15:16 heartbeat.json
[2025-10-11 15:17:00] -rw-r--r--. 1 boincer umatlas        27 Oct 11 15:16 wrapper_checkpoint.txt
[2025-10-11 15:17:00] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 15:16 boinc_mmap_file
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas        95 Oct 11 15:16 pilot_heartbeat.json
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas       823 Oct 11 15:16 pilotlog.txt
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas    473817 Oct 11 15:17 log.46676269._058625.job.log.1
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas       357 Oct 11 15:17 output.list
[2025-10-11 15:17:00] -rw-r--r--. 1 boincer umatlas       620 Oct 11 15:17 runtime_log
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas    829440 Oct 11 15:17 result.tar.gz
[2025-10-11 15:17:00] -rw-r--r--. 1 boincer umatlas      8700 Oct 11 15:17 runtime_log.err
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas       651 Oct 11 15:17 bksLDmz8oR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCYgNDm51IPdm.diag
[2025-10-11 15:17:00] -rw-r--r--. 1 boincer umatlas     22340 Oct 11 15:17 stderr.txt
[2025-10-11 15:17:00] HITS file was successfully produced:
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas 196895503 Oct 11 15:15 shared/HITS.pool.root.1
[2025-10-11 15:17:00]  *** Contents of shared directory: ***
[2025-10-11 15:17:00] total 412564
[2025-10-11 15:17:00] -rw-r--r--. 2 boincer umatlas 224137832 Oct 11 14:19 ATLAS.root_0
[2025-10-11 15:17:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 14:19 start_atlas.sh
[2025-10-11 15:17:00] -rw-r--r--. 2 boincer umatlas    569674 Oct 11 14:19 input.tar.gz
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas 196895503 Oct 11 15:15 HITS.pool.root.1
[2025-10-11 15:17:00] -rw-------. 1 boincer umatlas    829440 Oct 11 15:17 result.tar.gz
15:17:02 (1679956): run_atlas exited; CPU time 22747.244161
15:17:02 (1679956): called boinc_finish(0)

</stderr_txt>
]]>

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