Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:28:20 (2737800): wrapper (7.7.26015): starting
04:28:20 (2737800): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 04:28:20] Arguments: --nthreads 3
[2025-10-12 04:28:20] Threads: 3
[2025-10-12 04:28:20] Checking for CVMFS
[2025-10-12 04:28:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:28:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:28:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:28:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:28:21] 2.9.2.0 2131560 2119 66224 151604 1 57 36727822 36864001 0 130560 0 1579871 99.991 73319 1188 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 04:28:21] CVMFS is ok
[2025-10-12 04:28:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:28:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:28:21] Further information can be found at the LHC@home message board.
[2025-10-12 04:28:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:28:21] Checking for apptainer binary...
[2025-10-12 04:28:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:28:21] Running /usr/bin/apptainer --version
[2025-10-12 04:28:21] apptainer version 1.4.1-1.1
[2025-10-12 04:28:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:28:21] atlasA228
[2025-10-12 04:28:21] apptainer works
[2025-10-12 04:28:21] Set ATHENA_PROC_NUMBER=3
[2025-10-12 04:28:21] Set ATHENA_CORE_NUMBER=3
[2025-10-12 04:28:21] Starting ATLAS job with PandaID=6837961890
[2025-10-12 04:28:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:00:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:00:44] 2025-10-12 03:59:49,153 | INFO     | [job] validate thread has finished
[2025-10-12 06:00:44] 2025-10-12 03:59:49,159 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:00:44] 2025-10-12 03:59:49,209 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:00:44] 2025-10-12 03:59:49,256 | INFO     | [job] control thread has finished
[2025-10-12 06:00:44] 2025-10-12 03:59:49,303 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:00:44] 2025-10-12 03:59:49,308 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:00:44] 2025-10-12 03:59:49,390 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:00:44] 2025-10-12 03:59:50,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:00:44] 2025-10-12 03:59:54,571 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:00:44] 2025-10-12 04:00:18,276 | INFO     | PID=2741524 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:00:44] 2025-10-12 04:00:18,276 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:00:44] 2025-10-12 04:00:18,276 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:00:44] 2025-10-12 04:00:18,276 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:00:44] 2025-10-12 04:00:38,845 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:00:44] 2025-10-12 04:00:38,967 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140638469777216)>', '<ExcThread(monitor, started 140637580007168)>']
[2025-10-12 06:00:44] 2025-10-12 04:00:39,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:00:44] 2025-10-12 04:00:39,389 | INFO     | [monitor] control thread has ended
[2025-10-12 06:00:44] 2025-10-12 04:00:43,993 | INFO     | all workflow threads have been joined
[2025-10-12 06:00:44] 2025-10-12 04:00:44,006 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:00:44] 2025-10-12 04:00:44,007 | INFO     | traces error code: 0
[2025-10-12 06:00:44] 2025-10-12 04:00:44,007 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:00:44] 2025-10-12 04:00:44,057 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:00:44] 2025-10-12 04:00:44,060 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:00:44] 2025-10-12 04:00:44,063 [wrapper] pilotpid: 2741524
[2025-10-12 06:00:44] 2025-10-12 04:00:44,066 [wrapper] Pilot exit status: 0
[2025-10-12 06:00:44] 2025-10-12 04:00:44,074 [wrapper] pandaids: 6837961890
[2025-10-12 06:00:44] 2025-10-12 04:00:44,092 [wrapper] cleanup supervisor_pilot 2760369 2741525
[2025-10-12 06:00:44] 2025-10-12 04:00:44,095 [wrapper] Test setup, not cleaning
[2025-10-12 06:00:44] 2025-10-12 04:00:44,098 [wrapper] apfmon messages muted
[2025-10-12 06:00:44] 2025-10-12 04:00:44,100 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:00:44] 2025-10-12 04:00:44,103 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:00:44]  *** Error codes and diagnostics ***
[2025-10-12 06:00:44]     "exeErrorCode": 0,
[2025-10-12 06:00:44]     "exeErrorDiag": "",
[2025-10-12 06:00:44]     "pilotErrorCode": 0,
[2025-10-12 06:00:44]     "pilotErrorDiag": "",
[2025-10-12 06:00:44]  *** Listing of results directory ***
[2025-10-12 06:00:44] total 416408
[2025-10-12 06:00:44] -rw-r--r-- 1 boinc boinc      5112 Oct 11 04:49 queuedata.json
[2025-10-12 06:00:44] -rwx------ 1 boinc boinc     36292 Oct 11 04:50 runpilot2-wrapper.sh
[2025-10-12 06:00:44] -rw-r--r-- 1 boinc boinc    557409 Oct 11 04:50 pilot3.tar.gz
[2025-10-12 06:00:44] -rw-r--r-- 1 boinc boinc       100 Oct 12 04:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:00:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 04:28 run_atlas
[2025-10-12 06:00:44] -rw-r--r-- 1 boinc boinc       105 Oct 12 04:28 job.xml
[2025-10-12 06:00:44] -rw-r--r-- 2 boinc boinc 220284211 Oct 12 04:28 EVNT.46676267._002000.pool.root.1
[2025-10-12 06:00:44] -rw-r--r-- 2 boinc boinc    569678 Oct 12 04:28 input.tar.gz
[2025-10-12 06:00:44] -rw-r--r-- 2 boinc boinc     15120 Oct 12 04:28 start_atlas.sh
[2025-10-12 06:00:44] drwxrwx--x 2 boinc boinc      4096 Oct 12 04:28 shared
[2025-10-12 06:00:44] -rw-r--r-- 1 boinc boinc         0 Oct 12 04:28 boinc_setup_complete
[2025-10-12 06:00:44] -rw-r--r-- 1 boinc boinc      6199 Oct 12 04:28 init_data.xml
[2025-10-12 06:00:44] -rw-r--r-- 1 boinc boinc         0 Oct 12 04:28 boinc_lockfile
[2025-10-12 06:00:44] -rw-r--r-- 1 boinc boinc      2549 Oct 12 04:28 pandaJob.out
[2025-10-12 06:00:44] -rw------- 1 boinc boinc    975496 Oct 12 04:28 agis_schedconf.cvmfs.json
[2025-10-12 06:00:44] -rw------- 1 boinc boinc   1560580 Oct 12 04:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:00:44] drwx------ 5 boinc boinc      4096 Oct 12 04:28 pilot3
[2025-10-12 06:00:44] -rw------- 1 boinc boinc 200116411 Oct 12 05:59 HITS.46676269._049624.pool.root.1
[2025-10-12 06:00:44] -rw-r--r-- 1 boinc boinc       529 Oct 12 05:59 boinc_task_state.xml
[2025-10-12 06:00:44] -rw------- 1 boinc boinc      1017 Oct 12 05:59 memory_monitor_summary.json
[2025-10-12 06:00:44] -rw------- 1 boinc boinc    252759 Oct 12 05:59 log.46676269._049624.job.log.tgz.1
[2025-10-12 06:00:44] -rw------- 1 boinc boinc      7768 Oct 12 05:59 heartbeat.json
[2025-10-12 06:00:44] -rw------- 1 boinc boinc        95 Oct 12 06:00 pilot_heartbeat.json
[2025-10-12 06:00:44] -rw-r--r-- 1 boinc boinc      8192 Oct 12 06:00 boinc_mmap_file
[2025-10-12 06:00:44] -rw-r--r-- 1 boinc boinc        27 Oct 12 06:00 wrapper_checkpoint.txt
[2025-10-12 06:00:44] -rw------- 1 boinc boinc      4752 Oct 12 06:00 pilotlog.txt
[2025-10-12 06:00:44] -rw------- 1 boinc boinc    799261 Oct 12 06:00 log.46676269._049624.job.log.1
[2025-10-12 06:00:44] -rw------- 1 boinc boinc       357 Oct 12 06:00 output.list
[2025-10-12 06:00:44] -rw-r--r-- 1 boinc boinc       620 Oct 12 06:00 runtime_log
[2025-10-12 06:00:44] -rw------- 1 boinc boinc   1075200 Oct 12 06:00 result.tar.gz
[2025-10-12 06:00:44] -rw-r--r-- 1 boinc boinc      8792 Oct 12 06:00 runtime_log.err
[2025-10-12 06:00:44] -rw------- 1 boinc boinc       661 Oct 12 06:00 CCGMDmTreR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm6zQMDmKXcpam.diag
[2025-10-12 06:00:44] -rw-r--r-- 1 boinc boinc      5644 Oct 12 06:00 stderr.txt
[2025-10-12 06:00:44] HITS file was successfully produced:
[2025-10-12 06:00:44] -rw------- 1 boinc boinc 200116411 Oct 12 05:59 shared/HITS.pool.root.1
[2025-10-12 06:00:44]  *** Contents of shared directory: ***
[2025-10-12 06:00:44] total 412188
[2025-10-12 06:00:44] -rw-r--r-- 2 boinc boinc 220284211 Oct 12 04:28 ATLAS.root_0
[2025-10-12 06:00:44] -rw-r--r-- 2 boinc boinc    569678 Oct 12 04:28 input.tar.gz
[2025-10-12 06:00:44] -rw-r--r-- 2 boinc boinc     15120 Oct 12 04:28 start_atlas.sh
[2025-10-12 06:00:44] -rw------- 1 boinc boinc 200116411 Oct 12 05:59 HITS.pool.root.1
[2025-10-12 06:00:44] -rw------- 1 boinc boinc   1075200 Oct 12 06:00 result.tar.gz
06:00:45 (2737800): run_atlas exited; CPU time 15676.580665
06:00:45 (2737800): called boinc_finish(0)

</stderr_txt>
]]>

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