Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:18:37 (2507341): wrapper (7.7.26015): starting
14:18:37 (2507341): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 14:18:37] Arguments: --nthreads 12
[2025-10-11 14:18:37] Threads: 12
[2025-10-11 14:18:37] Checking for CVMFS
[2025-10-11 14:18:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:18:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:18:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:18:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:18:38] 2.13.2.0 135553 3104 111964 151593 2 69 31729226 32503809 7926 16776704 0 51058082 99.972 3200442 51562 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 14:18:38] CVMFS is ok
[2025-10-11 14:18:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:18:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:18:38] Further information can be found at the LHC@home message board.
[2025-10-11 14:18:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:18:38] Checking for apptainer binary...
[2025-10-11 14:18:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:18:38] Running /usr/bin/apptainer --version
[2025-10-11 14:18:38] apptainer version 1.4.3-1.el9
[2025-10-11 14:18:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:18:38] c8-7-2.aglt2.org
[2025-10-11 14:18:38] apptainer works
[2025-10-11 14:18:38] Set ATHENA_PROC_NUMBER=12
[2025-10-11 14:18:38] Set ATHENA_CORE_NUMBER=12
[2025-10-11 14:18:38] Starting ATLAS job with PandaID=6837328171
[2025-10-11 14:18:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 14:47:54]  *** The last 200 lines of the pilot log: ***
[2025-10-11 14:47:54]  replicas=None
[2025-10-11 14:47:54]  scope=mc23_13p6TeV
[2025-10-11 14:47:54]  status=None
[2025-10-11 14:47:54]  status_code=0
[2025-10-11 14:47:54]  storage_token=
[2025-10-11 14:47:54]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6837328171/log.46676269._013549.job.log.tgz.1
[2025-10-11 14:47:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/64/log.46676269._013549.job.log.tgz.1
[2025-10-11 14:47:54]  workdir=None
[2025-10-11 14:47:54] ]
[2025-10-11 14:47:54] 2025-10-11 18:46:57,833 | INFO     | transferring file log.46676269._013549.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6837328171/log.46676269._013549.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 14:47:54] 2025-10-11 18:46:57,833 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6837328171/log.46676269._013549.job.log.tgz.1 /tmp/boinchome/slots/5/log.46676269._013549.job
[2025-10-11 14:47:54] 2025-10-11 18:46:57,852 | INFO     | adding to output.list: log.46676269._013549.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/64/log.46676269._013549.job.log.tg
[2025-10-11 14:47:54] 2025-10-11 18:46:57,852 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 14:47:54] 2025-10-11 18:46:57,853 | INFO     | summary of transferred files:
[2025-10-11 14:47:54] 2025-10-11 18:46:57,853 | INFO     |  -- lfn=log.46676269._013549.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 14:47:54] 2025-10-11 18:46:57,853 | INFO     | stage-out finished correctly
[2025-10-11 14:47:54] 2025-10-11 18:46:57,909 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 14:47:54] 2025-10-11 18:46:58,027 | INFO     | monitor loop #129: job 0:6837328171 is in state 'finished'
[2025-10-11 14:47:54] 2025-10-11 18:46:58,028 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:47:54] 2025-10-11 18:46:58,897 | INFO     | PID=2511151 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 14:47:54] 2025-10-11 18:46:58,897 | INFO     | .. there are 11 such processes running
[2025-10-11 14:47:54] 2025-10-11 18:46:59,580 | INFO     | job 6837328171 has state=finished
[2025-10-11 14:47:54] 2025-10-11 18:46:59,581 | INFO     | preparing for final server update for job 6837328171 in state='finished'
[2025-10-11 14:47:54] 2025-10-11 18:46:59,581 | INFO     | this job has now completed (state=finished)
[2025-10-11 14:47:54] 2025-10-11 18:46:59,581 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 14:47:54] 2025-10-11 18:46:59,581 | INFO     | log transfer has been attempted: DONE
[2025-10-11 14:47:54] 2025-10-11 18:46:59,581 | INFO     | job 6837328171 has finished - writing final server update
[2025-10-11 14:47:54] 2025-10-11 18:46:59,581 | INFO     | total number of processed events: 400 (read)
[2025-10-11 14:47:54] 2025-10-11 18:46:59,582 | INFO     | executing command: lscpu
[2025-10-11 14:47:54] 2025-10-11 18:46:59,647 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 14:47:54] 2025-10-11 18:46:59,898 | INFO     | time since job start (1692s) is within the limit (172800.0s)
[2025-10-11 14:47:54] 2025-10-11 18:47:00,530 | INFO     | monitor loop #130: job 0:6837328171 is in state 'finished'
[2025-10-11 14:47:54] 2025-10-11 18:47:00,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:47:54] 2025-10-11 18:47:01,903 | INFO     | time since job start (1694s) is within the limit (172800.0s)
[2025-10-11 14:47:54] 2025-10-11 18:47:03,034 | INFO     | monitor loop #131: job 0:6837328171 is in state 'finished'
[2025-10-11 14:47:54] 2025-10-11 18:47:03,035 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:47:54] 2025-10-11 18:47:03,146 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 14:47:54] 2025-10-11 18:47:03,151 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3632.564492187499
[2025-10-11 14:47:54] 2025-10-11 18:47:03,163 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6837328171/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 14:47:54] 2025-10-11 18:47:03,164 | INFO     | extracted standard info from prmon json
[2025-10-11 14:47:54] 2025-10-11 18:47:03,165 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 14:47:54] 2025-10-11 18:47:03,165 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 14:47:54] 2025-10-11 18:47:03,165 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 14:47:54] 2025-10-11 18:47:03,165 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 14:47:54] 2025-10-11 18:47:03,166 | INFO     | fitting pss+swap vs Time
[2025-10-11 14:47:54] 2025-10-11 18:47:03,166 | INFO     | sum of square deviations: 2865170.0
[2025-10-11 14:47:54] 2025-10-11 18:47:03,166 | INFO     | sum of deviations: -197453522.99999997
[2025-10-11 14:47:54] 2025-10-11 18:47:03,166 | INFO     | mean x: 1760207666.0
[2025-10-11 14:47:54] 2025-10-11 18:47:03,166 | INFO     | mean y: 2457739.904761905
[2025-10-11 14:47:54] 2025-10-11 18:47:03,166 | INFO     | -- intersect: 121307373281.84721
[2025-10-11 14:47:54] 2025-10-11 18:47:03,166 | INFO     | intersect: 121307373281.84721
[2025-10-11 14:47:54] 2025-10-11 18:47:03,166 | INFO     | chi2: 0.0011732247887124095
[2025-10-11 14:47:54] 2025-10-11 18:47:03,166 | INFO     | -- intersect: 121307373281.84721
[2025-10-11 14:47:54] 2025-10-11 18:47:03,166 | INFO     | current memory leak: -68.92 B/s (using 21 data points, chi2=0.00)
[2025-10-11 14:47:54] 2025-10-11 18:47:03,167 | INFO     | could have reported an average CPU frequency of 3633 MHz (4 samples)
[2025-10-11 14:47:54] 2025-10-11 18:47:03,167 | INFO     | ..............................
[2025-10-11 14:47:54] 2025-10-11 18:47:03,167 | INFO     | . Timing measurements:
[2025-10-11 14:47:54] 2025-10-11 18:47:03,167 | INFO     | . get job = 0 s
[2025-10-11 14:47:54] 2025-10-11 18:47:03,167 | INFO     | . initial setup = 2 s
[2025-10-11 14:47:54] 2025-10-11 18:47:03,167 | INFO     | . payload setup = 4 s
[2025-10-11 14:47:54] 2025-10-11 18:47:03,167 | INFO     | . stage-in = 0 s
[2025-10-11 14:47:54] 2025-10-11 18:47:03,167 | INFO     | . payload execution = 1666 s
[2025-10-11 14:47:54] 2025-10-11 18:47:03,167 | INFO     | . stage-out = 0 s
[2025-10-11 14:47:54] 2025-10-11 18:47:03,167 | INFO     | . log creation = 0 s
[2025-10-11 14:47:54] 2025-10-11 18:47:03,167 | INFO     | ..............................
[2025-10-11 14:47:54] 2025-10-11 18:47:03,507 | INFO     | 
[2025-10-11 14:47:54] 2025-10-11 18:47:03,507 | INFO     | job summary report
[2025-10-11 14:47:54] 2025-10-11 18:47:03,507 | INFO     | --------------------------------------------------
[2025-10-11 14:47:54] 2025-10-11 18:47:03,507 | INFO     | PanDA job id: 6837328171
[2025-10-11 14:47:54] 2025-10-11 18:47:03,507 | INFO     | task id: 46676269
[2025-10-11 14:47:54] 2025-10-11 18:47:03,507 | INFO     | errors: (none)
[2025-10-11 14:47:54] 2025-10-11 18:47:03,507 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 14:47:54] 2025-10-11 18:47:03,507 | INFO     | pilot state: finished 
[2025-10-11 14:47:54] 2025-10-11 18:47:03,507 | INFO     | transexitcode: 0
[2025-10-11 14:47:54] 2025-10-11 18:47:03,507 | INFO     | exeerrorcode: 0
[2025-10-11 14:47:54] 2025-10-11 18:47:03,507 | INFO     | exeerrordiag: 
[2025-10-11 14:47:54] 2025-10-11 18:47:03,508 | INFO     | exitcode: 0
[2025-10-11 14:47:54] 2025-10-11 18:47:03,508 | INFO     | exitmsg: OK
[2025-10-11 14:47:54] 2025-10-11 18:47:03,508 | INFO     | cpuconsumptiontime: 17717 s
[2025-10-11 14:47:54] 2025-10-11 18:47:03,508 | INFO     | nevents: 400
[2025-10-11 14:47:54] 2025-10-11 18:47:03,508 | INFO     | neventsw: 0
[2025-10-11 14:47:54] 2025-10-11 18:47:03,508 | INFO     | pid: 2517827
[2025-10-11 14:47:54] 2025-10-11 18:47:03,508 | INFO     | pgrp: 2517827
[2025-10-11 14:47:54] 2025-10-11 18:47:03,508 | INFO     | corecount: 12
[2025-10-11 14:47:54] 2025-10-11 18:47:03,508 | INFO     | event service: False
[2025-10-11 14:47:54] 2025-10-11 18:47:03,508 | INFO     | sizes: {0: 2348856, 1: 2348856, 4: 2349146, 11: 2349174, 1675: 2374041, 1677: 2383223, 1682: 2383361}
[2025-10-11 14:47:54] 2025-10-11 18:47:03,508 | INFO     | --------------------------------------------------
[2025-10-11 14:47:54] 2025-10-11 18:47:03,508 | INFO     | 
[2025-10-11 14:47:54] 2025-10-11 18:47:03,508 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-11 14:47:54] 2025-10-11 18:47:03,525 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,525 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,525 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,525 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,525 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,525 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,525 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,525 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,525 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,525 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,525 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,526 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,526 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,526 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,526 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,527 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,527 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,527 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 14:47:54] 2025-10-11 18:47:03,527 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,527 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 14:47:54] 2025-10-11 18:47:03,527 | INFO     | job 6837328171 has completed (purged errors)
[2025-10-11 14:47:54] 2025-10-11 18:47:03,527 | INFO     | overall cleanup function is called
[2025-10-11 14:47:54] 2025-10-11 18:47:04,531 | INFO     | --- collectZombieJob: --- 10, [2517827]
[2025-10-11 14:47:54] 2025-10-11 18:47:04,531 | INFO     | zombie collector waiting for pid 2517827
[2025-10-11 14:47:54] 2025-10-11 18:47:04,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 14:47:54] 2025-10-11 18:47:04,531 | INFO     | collected zombie processes
[2025-10-11 14:47:54] 2025-10-11 18:47:04,531 | INFO     | will attempt to kill all subprocesses of pid=2517827
[2025-10-11 14:47:54] 2025-10-11 18:47:04,904 | INFO     | process IDs to be killed: [2517827] (in reverse order)
[2025-10-11 14:47:54] 2025-10-11 18:47:05,039 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 14:47:54] 2025-10-11 18:47:05,039 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 14:47:54] 2025-10-11 18:47:05,057 | INFO     | did not find any defunct processes belonging to 2517827
[2025-10-11 14:47:54] 2025-10-11 18:47:05,072 | INFO     | did not find any defunct processes belonging to 2517827
[2025-10-11 14:47:54] 2025-10-11 18:47:05,072 | INFO     | ready for new job
[2025-10-11 14:47:54] 2025-10-11 18:47:05,072 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 14:47:54] 2025-10-11 18:47:05,073 | INFO     | ***************************************
[2025-10-11 14:47:54] 2025-10-11 18:47:05,073 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 14:47:54] 2025-10-11 18:47:05,073 | INFO     | ***************************************
[2025-10-11 14:47:54] 2025-10-11 18:47:05,073 | INFO     | 
[2025-10-11 14:47:54] 2025-10-11 18:47:05,091 | INFO     | architecture information:
[2025-10-11 14:47:54] 2025-10-11 18:47:05,091 | INFO     | executing command: cat /etc/os-release
[2025-10-11 14:47:54] 2025-10-11 18:47:05,107 | INFO     | cat /etc/os-release:
[2025-10-11 14:47:54] NAME="CentOS Linux"
[2025-10-11 14:47:54] VERSION="7 (Core)"
[2025-10-11 14:47:54] ID="centos"
[2025-10-11 14:47:54] ID_LIKE="rhel fedora"
[2025-10-11 14:47:54] VERSION_ID="7"
[2025-10-11 14:47:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 14:47:54] ANSI_COLOR="0;31"
[2025-10-11 14:47:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 14:47:54] HOME_URL="https://www.centos.org/"
[2025-10-11 14:47:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 14:47:54] 
[2025-10-11 14:47:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 14:47:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 14:47:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 14:47:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 14:47:54] 
[2025-10-11 14:47:54] 2025-10-11 18:47:05,107 | INFO     | ***************************************
[2025-10-11 14:47:54] 2025-10-11 18:47:05,610 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-11 14:47:54] 2025-10-11 18:47:05,625 | INFO     | sufficient remaining disk space (91205140480 B)
[2025-10-11 14:47:54] 2025-10-11 18:47:05,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 14:47:54] 2025-10-11 18:47:05,625 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 14:47:54] 2025-10-11 18:47:05,625 | INFO     | update_server=False
[2025-10-11 14:47:54] 2025-10-11 18:47:05,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 14:47:54] 2025-10-11 18:47:05,919 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 14:47:54] 2025-10-11 18:47:06,379 | INFO     | all data control threads have been joined
[2025-10-11 14:47:54] 2025-10-11 18:47:06,539 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:47:54] 2025-10-11 18:47:06,539 | INFO     | aborting loop
[2025-10-11 14:47:54] 2025-10-11 18:47:06,630 | INFO     | [job] retrieve thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:06,656 | INFO     | all payload control threads have been joined
[2025-10-11 14:47:54] 2025-10-11 18:47:06,662 | INFO     | all job control threads have been joined
[2025-10-11 14:47:54] 2025-10-11 18:47:06,754 | INFO     | [payload] validate_post thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:06,777 | INFO     | [payload] failed_post thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:06,841 | INFO     | [data] copytool_in thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:07,386 | INFO     | [data] control thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:07,545 | INFO     | [job] job monitor thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:07,597 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:07,641 | INFO     | [job] validate thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:07,653 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:07,661 | INFO     | [payload] control thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:07,666 | INFO     | [job] control thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:07,839 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:07,840 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:07,925 | INFO     | [data] copytool_out thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:08,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:47:54] 2025-10-11 18:47:08,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 14:47:54] 2025-10-11 18:47:09,240 | INFO     | [job] queue monitor thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:12,476 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 14:47:54] 2025-10-11 18:47:35,438 | INFO     | PID=2511151 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 14:47:54] 2025-10-11 18:47:35,438 | INFO     | .. there are 11 such processes running
[2025-10-11 14:47:54] 2025-10-11 18:47:35,440 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 14:47:54] 2025-10-11 18:47:35,440 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 14:47:54] 2025-10-11 18:47:35,440 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 14:47:54] 2025-10-11 18:47:48,908 | INFO     | [monitor] cgroup control has ended
[2025-10-11 14:47:54] 2025-10-11 18:47:49,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140692913911616)>', '<ExcThread(monitor, started 140692550559488)>']
[2025-10-11 14:47:54] 2025-10-11 18:47:49,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 14:47:54] 2025-10-11 18:47:49,509 | INFO     | [monitor] control thread has ended
[2025-10-11 14:47:54] 2025-10-11 18:47:54,447 | INFO     | all workflow threads have been joined
[2025-10-11 14:47:54] 2025-10-11 18:47:54,447 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 14:47:54] 2025-10-11 18:47:54,448 | INFO     | traces error code: 0
[2025-10-11 14:47:54] 2025-10-11 18:47:54,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 14:47:54] 2025-10-11 18:47:54,558 [wrapper] ==== pilot stdout END ====
[2025-10-11 14:47:54] 2025-10-11 18:47:54,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 14:47:54] 2025-10-11 18:47:54,563 [wrapper] pilotpid: 2511151
[2025-10-11 14:47:54] 2025-10-11 18:47:54,566 [wrapper] Pilot exit status: 0
[2025-10-11 14:47:54] 2025-10-11 18:47:54,576 [wrapper] pandaids: 6837328171
[2025-10-11 14:47:54] 2025-10-11 18:47:54,673 [wrapper] cleanup supervisor_pilot 2629274 2511152
[2025-10-11 14:47:54] 2025-10-11 18:47:54,676 [wrapper] Test setup, not cleaning
[2025-10-11 14:47:54] 2025-10-11 18:47:54,678 [wrapper] apfmon messages muted
[2025-10-11 14:47:54] 2025-10-11 18:47:54,679 [wrapper] ==== wrapper stdout END ====
[2025-10-11 14:47:54] 2025-10-11 18:47:54,681 [wrapper] ==== wrapper stderr END ====
[2025-10-11 14:47:54]  *** Error codes and diagnostics ***
[2025-10-11 14:47:54]     "exeErrorCode": 0,
[2025-10-11 14:47:54]     "exeErrorDiag": "",
[2025-10-11 14:47:54]     "pilotErrorCode": 0,
[2025-10-11 14:47:54]     "pilotErrorDiag": "",
[2025-10-11 14:47:54]  *** Listing of results directory ***
[2025-10-11 14:47:54] total 408296
[2025-10-11 14:47:54] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 06:27 pilot3.tar.gz
[2025-10-11 14:47:54] -rwx------. 1 boincer umatlas     36292 Oct  9 06:43 runpilot2-wrapper.sh
[2025-10-11 14:47:54] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 06:45 queuedata.json
[2025-10-11 14:47:54] -rw-r--r--. 1 boincer umatlas       100 Oct 11 14:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 14:47:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 14:18 run_atlas
[2025-10-11 14:47:54] -rw-r--r--. 1 boincer umatlas       105 Oct 11 14:18 job.xml
[2025-10-11 14:47:54] -rw-r--r--. 2 boincer umatlas 218334115 Oct 11 14:18 EVNT.46676267._000553.pool.root.1
[2025-10-11 14:47:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 14:18 start_atlas.sh
[2025-10-11 14:47:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 14:18 shared
[2025-10-11 14:47:54] -rw-r--r--. 2 boincer umatlas    569684 Oct 11 14:18 input.tar.gz
[2025-10-11 14:47:54] -rw-r--r--. 1 boincer umatlas         0 Oct 11 14:18 boinc_lockfile
[2025-10-11 14:47:54] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 14:18 pandaJob.out
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas    975520 Oct 11 14:18 agis_schedconf.cvmfs.json
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas   1560580 Oct 11 14:18 agis_ddmendpoints.agis.ALL.json
[2025-10-11 14:47:54] drwx------. 5 boincer umatlas      4096 Oct 11 14:18 pilot3
[2025-10-11 14:47:54] -rw-r--r--. 1 boincer umatlas      7161 Oct 11 14:37 init_data.xml
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas 194581606 Oct 11 14:46 HITS.46676269._013549.pool.root.1
[2025-10-11 14:47:54] -rw-r--r--. 1 boincer umatlas       529 Oct 11 14:46 boinc_task_state.xml
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas      1030 Oct 11 14:46 memory_monitor_summary.json
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas    358086 Oct 11 14:46 log.46676269._013549.job.log.tgz.1
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas      7773 Oct 11 14:47 heartbeat.json
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas        95 Oct 11 14:47 pilot_heartbeat.json
[2025-10-11 14:47:54] -rw-r--r--. 1 boincer umatlas        27 Oct 11 14:47 wrapper_checkpoint.txt
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas      4824 Oct 11 14:47 pilotlog.txt
[2025-10-11 14:47:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 14:47 boinc_mmap_file
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas    281413 Oct 11 14:47 log.46676269._013549.job.log.1
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas       357 Oct 11 14:47 output.list
[2025-10-11 14:47:54] -rw-r--r--. 1 boincer umatlas       620 Oct 11 14:47 runtime_log
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas    655360 Oct 11 14:47 result.tar.gz
[2025-10-11 14:47:54] -rw-r--r--. 1 boincer umatlas      8695 Oct 11 14:47 runtime_log.err
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas       648 Oct 11 14:47 3xcNDmkI3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwVNMDmj91GAo.diag
[2025-10-11 14:47:54] -rw-r--r--. 1 boincer umatlas     21935 Oct 11 14:47 stderr.txt
[2025-10-11 14:47:54] HITS file was successfully produced:
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas 194581606 Oct 11 14:46 shared/HITS.pool.root.1
[2025-10-11 14:47:54]  *** Contents of shared directory: ***
[2025-10-11 14:47:54] total 404464
[2025-10-11 14:47:54] -rw-r--r--. 2 boincer umatlas 218334115 Oct 11 14:18 ATLAS.root_0
[2025-10-11 14:47:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 14:18 start_atlas.sh
[2025-10-11 14:47:54] -rw-r--r--. 2 boincer umatlas    569684 Oct 11 14:18 input.tar.gz
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas 194581606 Oct 11 14:46 HITS.pool.root.1
[2025-10-11 14:47:54] -rw-------. 1 boincer umatlas    655360 Oct 11 14:47 result.tar.gz
14:47:56 (2507341): run_atlas exited; CPU time 17755.452415
14:47:56 (2507341): called boinc_finish(0)

</stderr_txt>
]]>

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