Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:25:32 (2646473): wrapper (7.7.26015): starting
05:25:32 (2646473): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 05:25:32] Arguments: --nthreads 3
[2025-10-12 05:25:32] Threads: 3
[2025-10-12 05:25:32] Checking for CVMFS
[2025-10-12 05:25:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:25:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:25:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:25:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:25:32] 2.9.2.0 1545274 3779 83264 151606 1 57 31183891 36864000 0 130560 0 2890633 99.990 128191 1021 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 05:25:32] CVMFS is ok
[2025-10-12 05:25:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:25:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:25:32] Further information can be found at the LHC@home message board.
[2025-10-12 05:25:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:25:32] Checking for apptainer binary...
[2025-10-12 05:25:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:25:32] Running /usr/bin/apptainer --version
[2025-10-12 05:25:32] apptainer version 1.4.1-1.1
[2025-10-12 05:25:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:25:33] atlasA223
[2025-10-12 05:25:33] apptainer works
[2025-10-12 05:25:33] Set ATHENA_PROC_NUMBER=3
[2025-10-12 05:25:33] Set ATHENA_CORE_NUMBER=3
[2025-10-12 05:25:33] Starting ATLAS job with PandaID=6837932814
[2025-10-12 05:25:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:48:51]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:48:51] 2025-10-12 04:47:54,566 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:47:54,604 | INFO     | all data control threads have been joined
[2025-10-12 06:48:51] 2025-10-12 04:47:54,630 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:47:54,658 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:47:54,821 | INFO     | all payload control threads have been joined
[2025-10-12 06:48:51] 2025-10-12 04:47:54,932 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:47:54,936 | INFO     | [job] validate thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:47:55,064 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:47:55,074 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:47:55,217 | INFO     | all job control threads have been joined
[2025-10-12 06:48:51] 2025-10-12 04:47:55,609 | INFO     | [data] control thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:47:55,706 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:47:55,827 | INFO     | [payload] control thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:47:55,847 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:47:55,894 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:47:56,222 | INFO     | [job] control thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:47:57,567 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:48:04,504 | INFO     | job.realtimelogging is not enabled
[2025-10-12 06:48:51] 2025-10-12 04:48:05,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:48:51] 2025-10-12 04:48:23,748 | INFO     | PID=2650195 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:48:51] 2025-10-12 04:48:23,748 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:48:51] 2025-10-12 04:48:23,748 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:48:51] 2025-10-12 04:48:23,748 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:48:51] 2025-10-12 04:48:44,450 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:48:51] 2025-10-12 04:48:46,342 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643080681280)>', '<ExcThread(monitor, started 139642565273344)>']
[2025-10-12 06:48:51] 2025-10-12 04:48:46,873 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:48:51] 2025-10-12 04:48:46,873 | INFO     | [monitor] control thread has ended
[2025-10-12 06:48:51] 2025-10-12 04:48:51,368 | INFO     | all workflow threads have been joined
[2025-10-12 06:48:51] 2025-10-12 04:48:51,368 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:48:51] 2025-10-12 04:48:51,368 | INFO     | traces error code: 0
[2025-10-12 06:48:51] 2025-10-12 04:48:51,368 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:48:51] 2025-10-12 04:48:51,421 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:48:51] 2025-10-12 04:48:51,423 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:48:51] 2025-10-12 04:48:51,426 [wrapper] pilotpid: 2650195
[2025-10-12 06:48:51] 2025-10-12 04:48:51,429 [wrapper] Pilot exit status: 0
[2025-10-12 06:48:51] 2025-10-12 04:48:51,436 [wrapper] pandaids: 6837932814
[2025-10-12 06:48:51] 2025-10-12 04:48:51,455 [wrapper] cleanup supervisor_pilot 2668466 2650196
[2025-10-12 06:48:51] 2025-10-12 04:48:51,458 [wrapper] Test setup, not cleaning
[2025-10-12 06:48:51] 2025-10-12 04:48:51,460 [wrapper] apfmon messages muted
[2025-10-12 06:48:51] 2025-10-12 04:48:51,463 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:48:51] 2025-10-12 04:48:51,465 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:48:51]  *** Error codes and diagnostics ***
[2025-10-12 06:48:51]     "exeErrorCode": 0,
[2025-10-12 06:48:51]     "exeErrorDiag": "",
[2025-10-12 06:48:51]     "pilotErrorCode": 0,
[2025-10-12 06:48:51]     "pilotErrorDiag": "",
[2025-10-12 06:48:51]  *** Listing of results directory ***
[2025-10-12 06:48:51] total 402088
[2025-10-12 06:48:51] -rw-r--r-- 1 boinc boinc    557409 Oct 11 04:04 pilot3.tar.gz
[2025-10-12 06:48:51] -rw-r--r-- 1 boinc boinc      5112 Oct 11 04:04 queuedata.json
[2025-10-12 06:48:51] -rwx------ 1 boinc boinc     36292 Oct 11 04:05 runpilot2-wrapper.sh
[2025-10-12 06:48:51] -rw-r--r-- 1 boinc boinc       100 Oct 12 05:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:48:51] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 05:25 run_atlas
[2025-10-12 06:48:51] -rw-r--r-- 1 boinc boinc       105 Oct 12 05:25 job.xml
[2025-10-12 06:48:51] -rw-r--r-- 2 boinc boinc 220102031 Oct 12 05:25 EVNT.46676267._001982.pool.root.1
[2025-10-12 06:48:51] -rw-r--r-- 2 boinc boinc    569683 Oct 12 05:25 input.tar.gz
[2025-10-12 06:48:51] -rw-r--r-- 2 boinc boinc     15120 Oct 12 05:25 start_atlas.sh
[2025-10-12 06:48:51] drwxrwx--x 2 boinc boinc      4096 Oct 12 05:25 shared
[2025-10-12 06:48:51] -rw-r--r-- 1 boinc boinc         0 Oct 12 05:25 boinc_setup_complete
[2025-10-12 06:48:51] -rw-r--r-- 1 boinc boinc      6448 Oct 12 05:25 init_data.xml
[2025-10-12 06:48:51] -rw-r--r-- 1 boinc boinc         0 Oct 12 05:25 boinc_lockfile
[2025-10-12 06:48:51] -rw-r--r-- 1 boinc boinc      2550 Oct 12 05:25 pandaJob.out
[2025-10-12 06:48:51] -rw------- 1 boinc boinc    975512 Oct 12 05:25 agis_schedconf.cvmfs.json
[2025-10-12 06:48:51] -rw------- 1 boinc boinc   1560580 Oct 12 05:25 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:48:51] drwx------ 5 boinc boinc      4096 Oct 12 05:25 pilot3
[2025-10-12 06:48:51] -rw------- 1 boinc boinc 185782239 Oct 12 06:47 HITS.46676269._049160.pool.root.1
[2025-10-12 06:48:51] -rw-r--r-- 1 boinc boinc       530 Oct 12 06:47 boinc_task_state.xml
[2025-10-12 06:48:51] -rw------- 1 boinc boinc      1017 Oct 12 06:47 memory_monitor_summary.json
[2025-10-12 06:48:51] -rw------- 1 boinc boinc    261876 Oct 12 06:47 log.46676269._049160.job.log.tgz.1
[2025-10-12 06:48:51] -rw------- 1 boinc boinc      7760 Oct 12 06:47 heartbeat.json
[2025-10-12 06:48:51] -rw------- 1 boinc boinc        95 Oct 12 06:48 pilot_heartbeat.json
[2025-10-12 06:48:51] -rw-r--r-- 1 boinc boinc        27 Oct 12 06:48 wrapper_checkpoint.txt
[2025-10-12 06:48:51] -rw-r--r-- 1 boinc boinc      8192 Oct 12 06:48 boinc_mmap_file
[2025-10-12 06:48:51] -rw------- 1 boinc boinc      4824 Oct 12 06:48 pilotlog.txt
[2025-10-12 06:48:51] -rw------- 1 boinc boinc    724774 Oct 12 06:48 log.46676269._049160.job.log.1
[2025-10-12 06:48:51] -rw------- 1 boinc boinc       357 Oct 12 06:48 output.list
[2025-10-12 06:48:51] -rw-r--r-- 1 boinc boinc       620 Oct 12 06:48 runtime_log
[2025-10-12 06:48:51] -rw------- 1 boinc boinc   1003520 Oct 12 06:48 result.tar.gz
[2025-10-12 06:48:51] -rw-r--r-- 1 boinc boinc      8792 Oct 12 06:48 runtime_log.err
[2025-10-12 06:48:51] -rw------- 1 boinc boinc       661 Oct 12 06:48 QmIKDmYAeR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDms6eNDmAn29Fn.diag
[2025-10-12 06:48:51] -rw-r--r-- 1 boinc boinc      6607 Oct 12 06:48 stderr.txt
[2025-10-12 06:48:51] HITS file was successfully produced:
[2025-10-12 06:48:51] -rw------- 1 boinc boinc 185782239 Oct 12 06:47 shared/HITS.pool.root.1
[2025-10-12 06:48:51]  *** Contents of shared directory: ***
[2025-10-12 06:48:51] total 397936
[2025-10-12 06:48:51] -rw-r--r-- 2 boinc boinc 220102031 Oct 12 05:25 ATLAS.root_0
[2025-10-12 06:48:51] -rw-r--r-- 2 boinc boinc    569683 Oct 12 05:25 input.tar.gz
[2025-10-12 06:48:51] -rw-r--r-- 2 boinc boinc     15120 Oct 12 05:25 start_atlas.sh
[2025-10-12 06:48:51] -rw------- 1 boinc boinc 185782239 Oct 12 06:47 HITS.pool.root.1
[2025-10-12 06:48:51] -rw------- 1 boinc boinc   1003520 Oct 12 06:48 result.tar.gz
06:48:53 (2646473): run_atlas exited; CPU time 14053.660189
06:48:53 (2646473): called boinc_finish(0)

</stderr_txt>
]]>

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