Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:06:54 (1298921): wrapper (7.7.26015): starting
14:06:54 (1298921): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 14:06:54] Arguments: --nthreads 8
[2025-10-11 14:06:54] Threads: 8
[2025-10-11 14:06:54] Checking for CVMFS
[2025-10-11 14:06:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:06:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:06:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:06:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:06:54] 2.13.2.0 4298 23249 222588 151592 1 64 22949200 32935937 4331 16776704 0 66621756 99.711 51543793 29851 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 14:06:54] CVMFS is ok
[2025-10-11 14:06:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:06:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:06:54] Further information can be found at the LHC@home message board.
[2025-10-11 14:06:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:06:54] Checking for apptainer binary...
[2025-10-11 14:06:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:06:54] Running /usr/bin/apptainer --version
[2025-10-11 14:06:54] apptainer version 1.4.3-1.el9
[2025-10-11 14:06:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:06:55] c-8-24.aglt2.org
[2025-10-11 14:06:55] apptainer works
[2025-10-11 14:06:55] Set ATHENA_PROC_NUMBER=8
[2025-10-11 14:06:55] Set ATHENA_CORE_NUMBER=8
[2025-10-11 14:06:55] Starting ATLAS job with PandaID=6838293390
[2025-10-11 14:06:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:47:45]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:47:45]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6838293390/log.46676269._055338.job.log.tgz.1
[2025-10-11 15:47:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/13/log.46676269._055338.job.log.tgz.1
[2025-10-11 15:47:45]  workdir=None
[2025-10-11 15:47:45] ]
[2025-10-11 15:47:45] 2025-10-11 19:47:03,741 | INFO     | transferring file log.46676269._055338.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6838293390/log.46676269._055338.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 15:47:45] 2025-10-11 19:47:03,742 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6838293390/log.46676269._055338.job.log.tgz.1 /tmp/boinchome/slots/2/log.46676269._055338.job
[2025-10-11 15:47:45] 2025-10-11 19:47:03,757 | INFO     | adding to output.list: log.46676269._055338.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/13/log.46676269._055338.job.log.tg
[2025-10-11 15:47:45] 2025-10-11 19:47:03,758 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 15:47:45] 2025-10-11 19:47:03,758 | INFO     | summary of transferred files:
[2025-10-11 15:47:45] 2025-10-11 19:47:03,758 | INFO     |  -- lfn=log.46676269._055338.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 15:47:45] 2025-10-11 19:47:03,758 | INFO     | stage-out finished correctly
[2025-10-11 15:47:45] 2025-10-11 19:47:04,523 | INFO     | monitor loop #446: job 0:6838293390 is in state 'finished'
[2025-10-11 15:47:45] 2025-10-11 19:47:04,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:47:45] 2025-10-11 19:47:05,539 | INFO     | time since job start (6000s) is within the limit (172800.0s)
[2025-10-11 15:47:45] 2025-10-11 19:47:06,012 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 15:47:45] 2025-10-11 19:47:07,027 | INFO     | monitor loop #447: job 0:6838293390 is in state 'finished'
[2025-10-11 15:47:45] 2025-10-11 19:47:07,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:47:45] 2025-10-11 19:47:07,543 | INFO     | time since job start (6002s) is within the limit (172800.0s)
[2025-10-11 15:47:45] 2025-10-11 19:47:08,850 | INFO     | job 6838293390 has state=finished
[2025-10-11 15:47:45] 2025-10-11 19:47:08,851 | INFO     | preparing for final server update for job 6838293390 in state='finished'
[2025-10-11 15:47:45] 2025-10-11 19:47:08,851 | INFO     | this job has now completed (state=finished)
[2025-10-11 15:47:45] 2025-10-11 19:47:08,851 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 15:47:45] 2025-10-11 19:47:08,851 | INFO     | log transfer has been attempted: DONE
[2025-10-11 15:47:45] 2025-10-11 19:47:08,852 | INFO     | job 6838293390 has finished - writing final server update
[2025-10-11 15:47:45] 2025-10-11 19:47:08,852 | INFO     | total number of processed events: 400 (read)
[2025-10-11 15:47:45] 2025-10-11 19:47:08,853 | INFO     | executing command: lscpu
[2025-10-11 15:47:45] 2025-10-11 19:47:08,901 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 15:47:45] 2025-10-11 19:47:09,530 | INFO     | monitor loop #448: job 0:6838293390 is in state 'finished'
[2025-10-11 15:47:45] 2025-10-11 19:47:09,530 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:47:45] 2025-10-11 19:47:09,549 | INFO     | time since job start (6004s) is within the limit (172800.0s)
[2025-10-11 15:47:45] 2025-10-11 19:47:11,554 | INFO     | time since job start (6006s) is within the limit (172800.0s)
[2025-10-11 15:47:45] 2025-10-11 19:47:12,033 | INFO     | monitor loop #449: job 0:6838293390 is in state 'finished'
[2025-10-11 15:47:45] 2025-10-11 19:47:12,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:47:45] 2025-10-11 19:47:12,395 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 15:47:45] 2025-10-11 19:47:12,402 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2720.1413249999996
[2025-10-11 15:47:45] 2025-10-11 19:47:12,409 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838293390/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:47:45] 2025-10-11 19:47:12,410 | INFO     | extracted standard info from prmon json
[2025-10-11 15:47:45] 2025-10-11 19:47:12,410 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 15:47:45] 2025-10-11 19:47:12,410 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 15:47:45] 2025-10-11 19:47:12,411 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:47:45] 2025-10-11 19:47:12,411 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:47:45] 2025-10-11 19:47:12,413 | INFO     | fitting pss+swap vs Time
[2025-10-11 15:47:45] 2025-10-11 19:47:12,414 | INFO     | sum of square deviations: 233641590.0
[2025-10-11 15:47:45] 2025-10-11 19:47:12,414 | INFO     | sum of deviations: 2233146438.0000005
[2025-10-11 15:47:45] 2025-10-11 19:47:12,414 | INFO     | mean x: 1760209100.0
[2025-10-11 15:47:45] 2025-10-11 19:47:12,415 | INFO     | mean y: 2192823.5934065934
[2025-10-11 15:47:45] 2025-10-11 19:47:12,415 | INFO     | -- intersect: -16821886664.139008
[2025-10-11 15:47:45] 2025-10-11 19:47:12,415 | INFO     | intersect: -16821886664.139008
[2025-10-11 15:47:45] 2025-10-11 19:47:12,415 | INFO     | chi2: 0.033613403937262025
[2025-10-11 15:47:45] 2025-10-11 19:47:12,415 | INFO     | -- intersect: -16821886664.139008
[2025-10-11 15:47:45] 2025-10-11 19:47:12,415 | INFO     | current memory leak: 9.56 B/s (using 91 data points, chi2=0.03)
[2025-10-11 15:47:45] 2025-10-11 19:47:12,416 | INFO     | could have reported an average CPU frequency of 2680 MHz (7 samples)
[2025-10-11 15:47:45] 2025-10-11 19:47:12,416 | INFO     | ..............................
[2025-10-11 15:47:45] 2025-10-11 19:47:12,416 | INFO     | . Timing measurements:
[2025-10-11 15:47:45] 2025-10-11 19:47:12,416 | INFO     | . get job = 0 s
[2025-10-11 15:47:45] 2025-10-11 19:47:12,416 | INFO     | . initial setup = 2 s
[2025-10-11 15:47:45] 2025-10-11 19:47:12,416 | INFO     | . payload setup = 5 s
[2025-10-11 15:47:45] 2025-10-11 19:47:12,417 | INFO     | . stage-in = 0 s
[2025-10-11 15:47:45] 2025-10-11 19:47:12,417 | INFO     | . payload execution = 5972 s
[2025-10-11 15:47:45] 2025-10-11 19:47:12,417 | INFO     | . stage-out = 0 s
[2025-10-11 15:47:45] 2025-10-11 19:47:12,417 | INFO     | . log creation = 0 s
[2025-10-11 15:47:45] 2025-10-11 19:47:12,417 | INFO     | ..............................
[2025-10-11 15:47:45] 2025-10-11 19:47:12,528 | INFO     | 
[2025-10-11 15:47:45] 2025-10-11 19:47:12,528 | INFO     | job summary report
[2025-10-11 15:47:45] 2025-10-11 19:47:12,528 | INFO     | --------------------------------------------------
[2025-10-11 15:47:45] 2025-10-11 19:47:12,528 | INFO     | PanDA job id: 6838293390
[2025-10-11 15:47:45] 2025-10-11 19:47:12,528 | INFO     | task id: 46676269
[2025-10-11 15:47:45] 2025-10-11 19:47:12,528 | INFO     | errors: (none)
[2025-10-11 15:47:45] 2025-10-11 19:47:12,529 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:47:45] 2025-10-11 19:47:12,529 | INFO     | pilot state: finished 
[2025-10-11 15:47:45] 2025-10-11 19:47:12,529 | INFO     | transexitcode: 0
[2025-10-11 15:47:45] 2025-10-11 19:47:12,529 | INFO     | exeerrorcode: 0
[2025-10-11 15:47:45] 2025-10-11 19:47:12,529 | INFO     | exeerrordiag: 
[2025-10-11 15:47:45] 2025-10-11 19:47:12,529 | INFO     | exitcode: 0
[2025-10-11 15:47:45] 2025-10-11 19:47:12,529 | INFO     | exitmsg: OK
[2025-10-11 15:47:45] 2025-10-11 19:47:12,529 | INFO     | cpuconsumptiontime: 44511 s
[2025-10-11 15:47:45] 2025-10-11 19:47:12,529 | INFO     | nevents: 400
[2025-10-11 15:47:45] 2025-10-11 19:47:12,529 | INFO     | neventsw: 0
[2025-10-11 15:47:45] 2025-10-11 19:47:12,530 | INFO     | pid: 1309880
[2025-10-11 15:47:45] 2025-10-11 19:47:12,530 | INFO     | pgrp: 1309880
[2025-10-11 15:47:45] 2025-10-11 19:47:12,530 | INFO     | corecount: 8
[2025-10-11 15:47:45] 2025-10-11 19:47:12,530 | INFO     | event service: False
[2025-10-11 15:47:45] 2025-10-11 19:47:12,530 | INFO     | sizes: {0: 2348029, 1: 2348885, 5: 2349147, 12: 2349203, 5981: 2376017, 5984: 2385015, 5986: 2385199, 5992: 2385393}
[2025-10-11 15:47:45] 2025-10-11 19:47:12,530 | INFO     | --------------------------------------------------
[2025-10-11 15:47:45] 2025-10-11 19:47:12,530 | INFO     | 
[2025-10-11 15:47:45] 2025-10-11 19:47:12,530 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 15:47:45] 2025-10-11 19:47:12,548 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,548 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,548 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,550 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:47:45] 2025-10-11 19:47:12,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,550 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:47:45] 2025-10-11 19:47:12,550 | INFO     | job 6838293390 has completed (purged errors)
[2025-10-11 15:47:45] 2025-10-11 19:47:12,551 | INFO     | overall cleanup function is called
[2025-10-11 15:47:45] 2025-10-11 19:47:13,554 | INFO     | --- collectZombieJob: --- 10, [1309880]
[2025-10-11 15:47:45] 2025-10-11 19:47:13,554 | INFO     | zombie collector waiting for pid 1309880
[2025-10-11 15:47:45] 2025-10-11 19:47:13,554 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:47:45] 2025-10-11 19:47:13,554 | INFO     | collected zombie processes
[2025-10-11 15:47:45] 2025-10-11 19:47:13,554 | INFO     | will attempt to kill all subprocesses of pid=1309880
[2025-10-11 15:47:45] 2025-10-11 19:47:13,806 | INFO     | process IDs to be killed: [1309880] (in reverse order)
[2025-10-11 15:47:45] 2025-10-11 19:47:13,873 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:47:45] 2025-10-11 19:47:13,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:47:45] 2025-10-11 19:47:13,881 | INFO     | did not find any defunct processes belonging to 1309880
[2025-10-11 15:47:45] 2025-10-11 19:47:13,888 | INFO     | did not find any defunct processes belonging to 1309880
[2025-10-11 15:47:45] 2025-10-11 19:47:13,888 | INFO     | ready for new job
[2025-10-11 15:47:45] 2025-10-11 19:47:13,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:47:45] 2025-10-11 19:47:13,890 | INFO     | ***************************************
[2025-10-11 15:47:45] 2025-10-11 19:47:13,890 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:47:45] 2025-10-11 19:47:13,890 | INFO     | ***************************************
[2025-10-11 15:47:45] 2025-10-11 19:47:13,890 | INFO     | 
[2025-10-11 15:47:45] 2025-10-11 19:47:13,903 | INFO     | architecture information:
[2025-10-11 15:47:45] 2025-10-11 19:47:13,904 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:47:45] 2025-10-11 19:47:13,917 | INFO     | cat /etc/os-release:
[2025-10-11 15:47:45] NAME="CentOS Linux"
[2025-10-11 15:47:45] VERSION="7 (Core)"
[2025-10-11 15:47:45] ID="centos"
[2025-10-11 15:47:45] ID_LIKE="rhel fedora"
[2025-10-11 15:47:45] VERSION_ID="7"
[2025-10-11 15:47:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:47:45] ANSI_COLOR="0;31"
[2025-10-11 15:47:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:47:45] HOME_URL="https://www.centos.org/"
[2025-10-11 15:47:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:47:45] 
[2025-10-11 15:47:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:47:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:47:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:47:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:47:45] 
[2025-10-11 15:47:45] 2025-10-11 19:47:13,917 | INFO     | ***************************************
[2025-10-11 15:47:45] 2025-10-11 19:47:14,422 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 15:47:45] 2025-10-11 19:47:14,436 | INFO     | sufficient remaining disk space (74366058496 B)
[2025-10-11 15:47:45] 2025-10-11 19:47:14,437 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:47:45] 2025-10-11 19:47:14,437 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:47:45] 2025-10-11 19:47:14,437 | INFO     | update_server=False
[2025-10-11 15:47:45] 2025-10-11 19:47:14,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:47:45] 2025-10-11 19:47:14,437 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:47:45] 2025-10-11 19:47:14,438 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:47:45] 2025-10-11 19:47:14,536 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 15:47:45] 2025-10-11 19:47:14,536 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 15:47:45] 2025-10-11 19:47:14,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:47:45] 2025-10-11 19:47:14,536 | INFO     | will abort loop
[2025-10-11 15:47:45] 2025-10-11 19:47:14,805 | INFO     | all job control threads have been joined
[2025-10-11 15:47:45] 2025-10-11 19:47:14,915 | INFO     | all payload control threads have been joined
[2025-10-11 15:47:45] 2025-10-11 19:47:14,984 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:47:45] 2025-10-11 19:47:15,084 | INFO     | all data control threads have been joined
[2025-10-11 15:47:45] 2025-10-11 19:47:15,442 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:15,443 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:15,541 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:15,568 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:15,628 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:15,810 | INFO     | [job] control thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:15,921 | INFO     | [payload] control thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:16,023 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:16,089 | INFO     | [data] control thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:16,138 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:16,236 | INFO     | [job] validate thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:16,376 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:16,443 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:16,500 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:16,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:47:45] 2025-10-11 19:47:20,631 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:24,722 | INFO     | job.realtimelogging is not enabled
[2025-10-11 15:47:45] 2025-10-11 19:47:25,728 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:47:45] 2025-10-11 19:47:26,684 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686556604224)>', '<ExcThread(monitor, started 139686051817216)>']
[2025-10-11 15:47:45] 2025-10-11 19:47:31,710 | INFO     | all workflow threads have been joined
[2025-10-11 15:47:45] 2025-10-11 19:47:31,710 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:47:45] 2025-10-11 19:47:31,711 | INFO     | traces error code: 0
[2025-10-11 15:47:45] 2025-10-11 19:47:31,711 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:47:45] 2025-10-11 19:47:44,939 | INFO     | PID=1302576 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:47:45] 2025-10-11 19:47:44,939 | INFO     | .. there are 6 such processes running
[2025-10-11 15:47:45] 2025-10-11 19:47:44,939 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:47:45] 2025-10-11 19:47:44,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:47:45] 2025-10-11 19:47:44,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:47:45] 2025-10-11 19:47:44,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:47:45] 2025-10-11 19:47:44,940 | INFO     | [monitor] control thread has ended
[2025-10-11 15:47:45] 2025-10-11 19:47:45,019 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:47:45] 2025-10-11 19:47:45,022 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:47:45] 2025-10-11 19:47:45,024 [wrapper] pilotpid: 1302576
[2025-10-11 15:47:45] 2025-10-11 19:47:45,027 [wrapper] Pilot exit status: 0
[2025-10-11 15:47:45] 2025-10-11 19:47:45,036 [wrapper] pandaids: 6838293390
[2025-10-11 15:47:45] 2025-10-11 19:47:45,081 [wrapper] cleanup supervisor_pilot 1561873 1302577
[2025-10-11 15:47:45] 2025-10-11 19:47:45,084 [wrapper] Test setup, not cleaning
[2025-10-11 15:47:45] 2025-10-11 19:47:45,087 [wrapper] apfmon messages muted
[2025-10-11 15:47:45] 2025-10-11 19:47:45,089 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:47:45] 2025-10-11 19:47:45,091 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:47:45]  *** Error codes and diagnostics ***
[2025-10-11 15:47:45]     "exeErrorCode": 0,
[2025-10-11 15:47:45]     "exeErrorDiag": "",
[2025-10-11 15:47:45]     "pilotErrorCode": 0,
[2025-10-11 15:47:45]     "pilotErrorDiag": "",
[2025-10-11 15:47:45]  *** Listing of results directory ***
[2025-10-11 15:47:45] total 409140
[2025-10-11 15:47:45] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 05:19 pilot3.tar.gz
[2025-10-11 15:47:45] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 05:28 queuedata.json
[2025-10-11 15:47:45] -rwx------. 1 boincer umatlas     36292 Oct 11 05:29 runpilot2-wrapper.sh
[2025-10-11 15:47:45] -rw-r--r--. 1 boincer umatlas       100 Oct 11 14:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:47:45] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 14:06 run_atlas
[2025-10-11 15:47:45] -rw-r--r--. 1 boincer umatlas       105 Oct 11 14:06 job.xml
[2025-10-11 15:47:45] -rw-r--r--. 2 boincer umatlas 222525363 Oct 11 14:06 EVNT.46676267._002219.pool.root.1
[2025-10-11 15:47:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 14:06 start_atlas.sh
[2025-10-11 15:47:45] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 14:06 shared
[2025-10-11 15:47:45] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 14:06 input.tar.gz
[2025-10-11 15:47:45] -rw-r--r--. 1 boincer umatlas         0 Oct 11 14:06 boinc_lockfile
[2025-10-11 15:47:45] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 14:06 pandaJob.out
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas    975520 Oct 11 14:07 agis_schedconf.cvmfs.json
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas   1560580 Oct 11 14:07 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:47:45] drwx------. 5 boincer umatlas      4096 Oct 11 14:07 pilot3
[2025-10-11 15:47:45] -rw-r--r--. 1 boincer umatlas      6660 Oct 11 15:45 init_data.xml
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas 190093912 Oct 11 15:46 HITS.46676269._055338.pool.root.1
[2025-10-11 15:47:45] -rw-r--r--. 1 boincer umatlas       529 Oct 11 15:46 boinc_task_state.xml
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas        95 Oct 11 15:46 pilot_heartbeat.json
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas      1033 Oct 11 15:46 memory_monitor_summary.json
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas    344109 Oct 11 15:47 log.46676269._055338.job.log.tgz.1
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas      7809 Oct 11 15:47 heartbeat.json
[2025-10-11 15:47:45] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 15:47 boinc_mmap_file
[2025-10-11 15:47:45] -rw-r--r--. 1 boincer umatlas        27 Oct 11 15:47 wrapper_checkpoint.txt
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas       822 Oct 11 15:47 pilotlog.txt
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas    874990 Oct 11 15:47 log.46676269._055338.job.log.1
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas       357 Oct 11 15:47 output.list
[2025-10-11 15:47:45] -rw-r--r--. 1 boincer umatlas       620 Oct 11 15:47 runtime_log
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas   1239040 Oct 11 15:47 result.tar.gz
[2025-10-11 15:47:45] -rw-r--r--. 1 boincer umatlas      8693 Oct 11 15:47 runtime_log.err
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas       649 Oct 11 15:47 GrINDm45kR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJ4fNDmsQMRjn.diag
[2025-10-11 15:47:45] -rw-r--r--. 1 boincer umatlas     22257 Oct 11 15:47 stderr.txt
[2025-10-11 15:47:45] HITS file was successfully produced:
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas 190093912 Oct 11 15:46 shared/HITS.pool.root.1
[2025-10-11 15:47:45]  *** Contents of shared directory: ***
[2025-10-11 15:47:45] total 404744
[2025-10-11 15:47:45] -rw-r--r--. 2 boincer umatlas 222525363 Oct 11 14:06 ATLAS.root_0
[2025-10-11 15:47:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 14:06 start_atlas.sh
[2025-10-11 15:47:45] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 14:06 input.tar.gz
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas 190093912 Oct 11 15:46 HITS.pool.root.1
[2025-10-11 15:47:45] -rw-------. 1 boincer umatlas   1239040 Oct 11 15:47 result.tar.gz
15:47:46 (1298921): run_atlas exited; CPU time 44678.021526
15:47:46 (1298921): called boinc_finish(0)

</stderr_txt>
]]>

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