Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:05:46 (13567): wrapper (7.7.26015): starting
14:05:46 (13567): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 14:05:46] Arguments: --nthreads 8
[2025-10-11 14:05:46] Threads: 8
[2025-10-11 14:05:46] Checking for CVMFS
[2025-10-11 14:05:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:05:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:05:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:05:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:05:46] 2.11.2.0 27562 268165 271388 151592 2 57 13412200 18432000 2749 130560 7 625545002 99.262 1123188329 26114 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-11 14:05:46] CVMFS is ok
[2025-10-11 14:05:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:05:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:05:46] Further information can be found at the LHC@home message board.
[2025-10-11 14:05:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:05:46] Checking for apptainer binary...
[2025-10-11 14:05:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:05:46] Running /usr/bin/apptainer --version
[2025-10-11 14:05:46] apptainer version 1.3.2-1.el7
[2025-10-11 14:05:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:05:47] c-9-30.aglt2.org
[2025-10-11 14:05:47] apptainer works
[2025-10-11 14:05:47] Set ATHENA_PROC_NUMBER=8
[2025-10-11 14:05:47] Set ATHENA_CORE_NUMBER=8
[2025-10-11 14:05:47] Starting ATLAS job with PandaID=6838292428
[2025-10-11 14:05:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 16:53:21]  *** The last 200 lines of the pilot log: ***
[2025-10-11 16:53:21] 2025-10-11 20:52:18,626 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 16:53:21] 2025-10-11 20:52:18,626 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 16:53:21] 2025-10-11 20:52:18,628 | INFO     | fitting pss+swap vs Time
[2025-10-11 16:53:21] 2025-10-11 20:52:18,629 | INFO     | sum of square deviations: 1367709365.0
[2025-10-11 16:53:21] 2025-10-11 20:52:18,629 | INFO     | sum of deviations: 9147603188.000002
[2025-10-11 16:53:21] 2025-10-11 20:52:18,629 | INFO     | mean x: 1760210955.5
[2025-10-11 16:53:21] 2025-10-11 20:52:18,630 | INFO     | mean y: 2447787.8048780486
[2025-10-11 16:53:21] 2025-10-11 20:52:18,630 | INFO     | -- intersect: -11770310197.28381
[2025-10-11 16:53:21] 2025-10-11 20:52:18,630 | INFO     | intersect: -11770310197.28381
[2025-10-11 16:53:21] 2025-10-11 20:52:18,630 | INFO     | chi2: 2.06496835277388
[2025-10-11 16:53:21] 2025-10-11 20:52:18,630 | INFO     | sum of square deviations: 1246386160.0
[2025-10-11 16:53:21] 2025-10-11 20:52:18,631 | INFO     | sum of deviations: 19353494643.999996
[2025-10-11 16:53:21] 2025-10-11 20:52:18,631 | INFO     | mean x: 1760210803.0
[2025-10-11 16:53:21] 2025-10-11 20:52:18,631 | INFO     | mean y: 2460282.2264150945
[2025-10-11 16:53:21] 2025-10-11 20:52:18,631 | INFO     | -- intersect: -27329542785.082542
[2025-10-11 16:53:21] 2025-10-11 20:52:18,631 | INFO     | intersect: -27329542785.082542
[2025-10-11 16:53:21] 2025-10-11 20:52:18,632 | INFO     | chi2: 1.2910145146744123
[2025-10-11 16:53:21] 2025-10-11 20:52:18,632 | INFO     | current chi2=1.2910145146744123 (change=37.48017915431064 %)
[2025-10-11 16:53:21] 2025-10-11 20:52:18,632 | INFO     | sum of square deviations: 1132458442.5
[2025-10-11 16:53:21] 2025-10-11 20:52:18,632 | INFO     | sum of deviations: 18663260124.000004
[2025-10-11 16:53:21] 2025-10-11 20:52:18,633 | INFO     | mean x: 1760210650.5
[2025-10-11 16:53:21] 2025-10-11 20:52:18,633 | INFO     | mean y: 2459357.987012987
[2025-10-11 16:53:21] 2025-10-11 20:52:18,633 | INFO     | -- intersect: -29006348391.986343
[2025-10-11 16:53:21] 2025-10-11 20:52:18,633 | INFO     | intersect: -29006348391.986343
[2025-10-11 16:53:21] 2025-10-11 20:52:18,633 | INFO     | chi2: 1.2921541009933095
[2025-10-11 16:53:21] 2025-10-11 20:52:18,633 | INFO     | current chi2=1.2921541009933095 (change=-0.08827060470227249 %)
[2025-10-11 16:53:21] 2025-10-11 20:52:18,633 | INFO     | right removable region: 153
[2025-10-11 16:53:21] 2025-10-11 20:52:18,633 | INFO     | sum of square deviations: 1246386160.0
[2025-10-11 16:53:21] 2025-10-11 20:52:18,634 | INFO     | sum of deviations: -11644396018.0
[2025-10-11 16:53:21] 2025-10-11 20:52:18,634 | INFO     | mean x: 1760211108.0
[2025-10-11 16:53:21] 2025-10-11 20:52:18,634 | INFO     | mean y: 2473494.4842767296
[2025-10-11 16:53:21] 2025-10-11 20:52:18,634 | INFO     | -- intersect: 16447292824.662468
[2025-10-11 16:53:21] 2025-10-11 20:52:18,635 | INFO     | intersect: 16447292824.662468
[2025-10-11 16:53:21] 2025-10-11 20:52:18,635 | INFO     | chi2: 0.8313731160632039
[2025-10-11 16:53:21] 2025-10-11 20:52:18,635 | INFO     | current chi2=0.8313731160632039 (change=59.73918365642664 %)
[2025-10-11 16:53:21] 2025-10-11 20:52:18,635 | INFO     | sum of square deviations: 1132458442.5
[2025-10-11 16:53:21] 2025-10-11 20:52:18,636 | INFO     | sum of deviations: -7438065927.000001
[2025-10-11 16:53:21] 2025-10-11 20:52:18,636 | INFO     | mean x: 1760211260.5
[2025-10-11 16:53:21] 2025-10-11 20:52:18,636 | INFO     | mean y: 2467807.2467532465
[2025-10-11 16:53:21] 2025-10-11 20:52:18,636 | INFO     | -- intersect: 11563657966.369766
[2025-10-11 16:53:21] 2025-10-11 20:52:18,636 | INFO     | intersect: 11563657966.369766
[2025-10-11 16:53:21] 2025-10-11 20:52:18,636 | INFO     | chi2: 0.7989942591653909
[2025-10-11 16:53:21] 2025-10-11 20:52:18,636 | INFO     | current chi2=0.7989942591653909 (change=3.894623998805296 %)
[2025-10-11 16:53:21] 2025-10-11 20:52:18,636 | INFO     | left removable region: 20
[2025-10-11 16:53:21] 2025-10-11 20:52:18,637 | INFO     | sum of square deviations: 729472282.0
[2025-10-11 16:53:21] 2025-10-11 20:52:18,637 | INFO     | sum of deviations: 1380651735.0000002
[2025-10-11 16:53:21] 2025-10-11 20:52:18,637 | INFO     | mean x: 1760211230.0
[2025-10-11 16:53:21] 2025-10-11 20:52:18,637 | INFO     | mean y: 2483341.097744361
[2025-10-11 16:53:21] 2025-10-11 20:52:18,637 | INFO     | -- intersect: -3329019100.644085
[2025-10-11 16:53:21] 2025-10-11 20:52:18,638 | INFO     | intersect: -3329019100.644085
[2025-10-11 16:53:21] 2025-10-11 20:52:18,638 | INFO     | chi2: 0.0002480886561707106
[2025-10-11 16:53:21] 2025-10-11 20:52:18,638 | INFO     | -- intersect: -3329019100.644085
[2025-10-11 16:53:21] 2025-10-11 20:52:18,638 | INFO     | current memory leak: 1.89 B/s (using 133 data points, chi2=0.00)
[2025-10-11 16:53:21] 2025-10-11 20:52:18,638 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-11 16:53:21] 2025-10-11 20:52:18,638 | INFO     | ..............................
[2025-10-11 16:53:21] 2025-10-11 20:52:18,638 | INFO     | . Timing measurements:
[2025-10-11 16:53:21] 2025-10-11 20:52:18,639 | INFO     | . get job = 0 s
[2025-10-11 16:53:21] 2025-10-11 20:52:18,639 | INFO     | . initial setup = 2 s
[2025-10-11 16:53:21] 2025-10-11 20:52:18,639 | INFO     | . payload setup = 5 s
[2025-10-11 16:53:21] 2025-10-11 20:52:18,639 | INFO     | . stage-in = 0 s
[2025-10-11 16:53:21] 2025-10-11 20:52:18,639 | INFO     | . payload execution = 9950 s
[2025-10-11 16:53:21] 2025-10-11 20:52:18,639 | INFO     | . stage-out = 0 s
[2025-10-11 16:53:21] 2025-10-11 20:52:18,639 | INFO     | . log creation = 0 s
[2025-10-11 16:53:21] 2025-10-11 20:52:18,639 | INFO     | ..............................
[2025-10-11 16:53:21] 2025-10-11 20:52:18,983 | INFO     | 
[2025-10-11 16:53:21] 2025-10-11 20:52:18,983 | INFO     | job summary report
[2025-10-11 16:53:21] 2025-10-11 20:52:18,983 | INFO     | --------------------------------------------------
[2025-10-11 16:53:21] 2025-10-11 20:52:18,984 | INFO     | PanDA job id: 6838292428
[2025-10-11 16:53:21] 2025-10-11 20:52:18,984 | INFO     | task id: 46676269
[2025-10-11 16:53:21] 2025-10-11 20:52:18,984 | INFO     | errors: (none)
[2025-10-11 16:53:21] 2025-10-11 20:52:18,984 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 16:53:21] 2025-10-11 20:52:18,984 | INFO     | pilot state: finished 
[2025-10-11 16:53:21] 2025-10-11 20:52:18,984 | INFO     | transexitcode: 0
[2025-10-11 16:53:21] 2025-10-11 20:52:18,985 | INFO     | exeerrorcode: 0
[2025-10-11 16:53:21] 2025-10-11 20:52:18,985 | INFO     | exeerrordiag: 
[2025-10-11 16:53:21] 2025-10-11 20:52:18,985 | INFO     | exitcode: 0
[2025-10-11 16:53:21] 2025-10-11 20:52:18,985 | INFO     | exitmsg: OK
[2025-10-11 16:53:21] 2025-10-11 20:52:18,985 | INFO     | cpuconsumptiontime: 74685 s
[2025-10-11 16:53:21] 2025-10-11 20:52:18,985 | INFO     | nevents: 400
[2025-10-11 16:53:21] 2025-10-11 20:52:18,986 | INFO     | neventsw: 0
[2025-10-11 16:53:21] 2025-10-11 20:52:18,986 | INFO     | pid: 24344
[2025-10-11 16:53:21] 2025-10-11 20:52:18,986 | INFO     | pgrp: 24344
[2025-10-11 16:53:21] 2025-10-11 20:52:18,986 | INFO     | corecount: 8
[2025-10-11 16:53:21] 2025-10-11 20:52:18,986 | INFO     | event service: False
[2025-10-11 16:53:21] 2025-10-11 20:52:18,986 | INFO     | sizes: {0: 2348685, 1: 2348884, 4: 2349146, 12: 2349174, 9959: 2377761, 9960: 2386943, 9964: 2387145}
[2025-10-11 16:53:21] 2025-10-11 20:52:18,986 | INFO     | --------------------------------------------------
[2025-10-11 16:53:21] 2025-10-11 20:52:18,987 | INFO     | 
[2025-10-11 16:53:21] 2025-10-11 20:52:18,987 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 16:53:21] 2025-10-11 20:52:19,002 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,003 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,003 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,003 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,003 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,004 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,004 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,005 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,005 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,005 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,005 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,005 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,005 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 16:53:21] 2025-10-11 20:52:19,006 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,006 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 16:53:21] 2025-10-11 20:52:19,006 | INFO     | job 6838292428 has completed (purged errors)
[2025-10-11 16:53:21] 2025-10-11 20:52:19,006 | INFO     | overall cleanup function is called
[2025-10-11 16:53:21] 2025-10-11 20:52:20,015 | INFO     | --- collectZombieJob: --- 10, [24344]
[2025-10-11 16:53:21] 2025-10-11 20:52:20,015 | INFO     | zombie collector waiting for pid 24344
[2025-10-11 16:53:21] 2025-10-11 20:52:20,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 16:53:21] 2025-10-11 20:52:20,015 | INFO     | collected zombie processes
[2025-10-11 16:53:21] 2025-10-11 20:52:20,015 | INFO     | will attempt to kill all subprocesses of pid=24344
[2025-10-11 16:53:21] 2025-10-11 20:52:20,326 | INFO     | process IDs to be killed: [24344] (in reverse order)
[2025-10-11 16:53:21] 2025-10-11 20:52:20,431 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 16:53:21] 2025-10-11 20:52:20,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 16:53:21] 2025-10-11 20:52:20,436 | INFO     | did not find any defunct processes belonging to 24344
[2025-10-11 16:53:21] 2025-10-11 20:52:20,441 | INFO     | did not find any defunct processes belonging to 24344
[2025-10-11 16:53:21] 2025-10-11 20:52:20,441 | INFO     | ready for new job
[2025-10-11 16:53:21] 2025-10-11 20:52:20,441 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 16:53:21] 2025-10-11 20:52:20,442 | INFO     | ***************************************
[2025-10-11 16:53:21] 2025-10-11 20:52:20,442 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 16:53:21] 2025-10-11 20:52:20,442 | INFO     | ***************************************
[2025-10-11 16:53:21] 2025-10-11 20:52:20,443 | INFO     | 
[2025-10-11 16:53:21] 2025-10-11 20:52:20,444 | INFO     | architecture information:
[2025-10-11 16:53:21] 2025-10-11 20:52:20,444 | INFO     | executing command: cat /etc/os-release
[2025-10-11 16:53:21] 2025-10-11 20:52:20,453 | INFO     | cat /etc/os-release:
[2025-10-11 16:53:21] NAME="CentOS Linux"
[2025-10-11 16:53:21] VERSION="7 (Core)"
[2025-10-11 16:53:21] ID="centos"
[2025-10-11 16:53:21] ID_LIKE="rhel fedora"
[2025-10-11 16:53:21] VERSION_ID="7"
[2025-10-11 16:53:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 16:53:21] ANSI_COLOR="0;31"
[2025-10-11 16:53:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 16:53:21] HOME_URL="https://www.centos.org/"
[2025-10-11 16:53:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 16:53:21] 
[2025-10-11 16:53:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 16:53:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 16:53:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 16:53:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 16:53:21] 
[2025-10-11 16:53:21] 2025-10-11 20:52:20,453 | INFO     | ***************************************
[2025-10-11 16:53:21] 2025-10-11 20:52:20,956 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 16:53:21] 2025-10-11 20:52:20,970 | INFO     | sufficient remaining disk space (104777908224 B)
[2025-10-11 16:53:21] 2025-10-11 20:52:20,970 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 16:53:21] 2025-10-11 20:52:20,970 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 16:53:21] 2025-10-11 20:52:20,970 | INFO     | update_server=False
[2025-10-11 16:53:21] 2025-10-11 20:52:20,970 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 16:53:21] 2025-10-11 20:52:20,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 16:53:21] 2025-10-11 20:52:20,971 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 16:53:21] 2025-10-11 20:52:20,974 | INFO     | all job control threads have been joined
[2025-10-11 16:53:21] 2025-10-11 20:52:21,414 | INFO     | all payload control threads have been joined
[2025-10-11 16:53:21] 2025-10-11 20:52:21,517 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 16:53:21] 2025-10-11 20:52:21,518 | INFO     | aborting loop
[2025-10-11 16:53:21] 2025-10-11 20:52:21,977 | INFO     | [job] retrieve thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:21,979 | INFO     | [job] control thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:22,068 | INFO     | all data control threads have been joined
[2025-10-11 16:53:21] 2025-10-11 20:52:22,303 | INFO     | [payload] validate_post thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:22,420 | INFO     | [payload] control thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:22,524 | INFO     | [job] job monitor thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:22,695 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:22,709 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:22,710 | INFO     | [job] validate thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:22,972 | INFO     | [data] copytool_out thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:23,068 | INFO     | [data] copytool_in thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:23,074 | INFO     | [data] control thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:23,174 | INFO     | [payload] failed_post thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:23,201 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:23,754 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 16:53:21] 2025-10-11 20:52:24,760 | INFO     | [job] queue monitor thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:24,977 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:31,466 | INFO     | job.realtimelogging is not enabled
[2025-10-11 16:53:21] 2025-10-11 20:52:32,471 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 16:53:21] 2025-10-11 20:52:50,453 | INFO     | PID=17495 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 16:53:21] 2025-10-11 20:52:50,453 | INFO     | .. there are 4 such processes running
[2025-10-11 16:53:21] 2025-10-11 20:52:50,454 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 16:53:21] 2025-10-11 20:52:50,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 16:53:21] 2025-10-11 20:52:50,455 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 16:53:21] 2025-10-11 20:53:14,040 | INFO     | [monitor] cgroup control has ended
[2025-10-11 16:53:21] 2025-10-11 20:53:15,715 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139622463690560)>', '<ExcThread(monitor, started 139621727987456)>']
[2025-10-11 16:53:21] 2025-10-11 20:53:16,572 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 16:53:21] 2025-10-11 20:53:16,573 | INFO     | [monitor] control thread has ended
[2025-10-11 16:53:21] 2025-10-11 20:53:20,743 | INFO     | all workflow threads have been joined
[2025-10-11 16:53:21] 2025-10-11 20:53:20,744 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 16:53:21] 2025-10-11 20:53:20,744 | INFO     | traces error code: 0
[2025-10-11 16:53:21] 2025-10-11 20:53:20,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 16:53:21] 2025-10-11 20:53:20,852 [wrapper] ==== pilot stdout END ====
[2025-10-11 16:53:21] 2025-10-11 20:53:20,855 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 16:53:21] 2025-10-11 20:53:20,857 [wrapper] pilotpid: 17495
[2025-10-11 16:53:21] 2025-10-11 20:53:20,860 [wrapper] Pilot exit status: 0
[2025-10-11 16:53:21] 2025-10-11 20:53:20,870 [wrapper] pandaids: 6838292428
[2025-10-11 16:53:21] 2025-10-11 20:53:20,935 [wrapper] cleanup supervisor_pilot 18072 17496
[2025-10-11 16:53:21] 2025-10-11 20:53:20,938 [wrapper] Test setup, not cleaning
[2025-10-11 16:53:21] 2025-10-11 20:53:20,940 [wrapper] apfmon messages muted
[2025-10-11 16:53:21] 2025-10-11 20:53:20,943 [wrapper] ==== wrapper stdout END ====
[2025-10-11 16:53:21] 2025-10-11 20:53:20,945 [wrapper] ==== wrapper stderr END ====
[2025-10-11 16:53:21]  *** Error codes and diagnostics ***
[2025-10-11 16:53:21]     "exeErrorCode": 0,
[2025-10-11 16:53:21]     "exeErrorDiag": "",
[2025-10-11 16:53:21]     "pilotErrorCode": 0,
[2025-10-11 16:53:21]     "pilotErrorDiag": "",
[2025-10-11 16:53:21]  *** Listing of results directory ***
[2025-10-11 16:53:21] total 417004
[2025-10-11 16:53:21] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 05:03 pilot3.tar.gz
[2025-10-11 16:53:21] -rwx------ 1 boincer umatlas     36292 Oct 11 05:08 runpilot2-wrapper.sh
[2025-10-11 16:53:21] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 05:08 queuedata.json
[2025-10-11 16:53:21] -rw-r--r-- 1 boincer umatlas       100 Oct 11 14:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 16:53:21] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 14:05 run_atlas
[2025-10-11 16:53:21] -rw-r--r-- 1 boincer umatlas       105 Oct 11 14:05 job.xml
[2025-10-11 16:53:21] -rw-r--r-- 2 boincer umatlas 220795336 Oct 11 14:05 EVNT.46676267._002200.pool.root.1
[2025-10-11 16:53:21] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 14:05 start_atlas.sh
[2025-10-11 16:53:21] drwxrwx--x 2 boincer umatlas      4096 Oct 11 14:05 shared
[2025-10-11 16:53:21] -rw-r--r-- 2 boincer umatlas    569676 Oct 11 14:05 input.tar.gz
[2025-10-11 16:53:21] -rw-r--r-- 1 boincer umatlas         0 Oct 11 14:05 boinc_lockfile
[2025-10-11 16:53:21] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 14:05 pandaJob.out
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas    975520 Oct 11 14:05 agis_schedconf.cvmfs.json
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas   1560580 Oct 11 14:05 agis_ddmendpoints.agis.ALL.json
[2025-10-11 16:53:21] drwx------ 5 boincer umatlas      4096 Oct 11 14:05 pilot3
[2025-10-11 16:53:21] -rw-r--r-- 1 boincer umatlas      6034 Oct 11 16:47 init_data.xml
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas 198701542 Oct 11 16:51 HITS.46676269._054867.pool.root.1
[2025-10-11 16:53:21] -rw-r--r-- 1 boincer umatlas       529 Oct 11 16:51 boinc_task_state.xml
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas      1048 Oct 11 16:52 memory_monitor_summary.json
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas    405597 Oct 11 16:52 log.46676269._054867.job.log.tgz.1
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas      7827 Oct 11 16:52 heartbeat.json
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas        95 Oct 11 16:52 pilot_heartbeat.json
[2025-10-11 16:53:21] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 16:53 boinc_mmap_file
[2025-10-11 16:53:21] -rw-r--r-- 1 boincer umatlas        28 Oct 11 16:53 wrapper_checkpoint.txt
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas      4894 Oct 11 16:53 pilotlog.txt
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas   1398479 Oct 11 16:53 log.46676269._054867.job.log.1
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas       357 Oct 11 16:53 output.list
[2025-10-11 16:53:21] -rw-r--r-- 1 boincer umatlas       620 Oct 11 16:53 runtime_log
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas   1822720 Oct 11 16:53 result.tar.gz
[2025-10-11 16:53:21] -rw-r--r-- 1 boincer umatlas      8694 Oct 11 16:53 runtime_log.err
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas       659 Oct 11 16:53 BpSMDmBmkR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmobRMDmlzUR2n.diag
[2025-10-11 16:53:21] -rw-r--r-- 1 boincer umatlas     20866 Oct 11 16:53 stderr.txt
[2025-10-11 16:53:21] HITS file was successfully produced:
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas 198701542 Oct 11 16:51 shared/HITS.pool.root.1
[2025-10-11 16:53:21]  *** Contents of shared directory: ***
[2025-10-11 16:53:21] total 412032
[2025-10-11 16:53:21] -rw-r--r-- 2 boincer umatlas 220795336 Oct 11 14:05 ATLAS.root_0
[2025-10-11 16:53:21] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 14:05 start_atlas.sh
[2025-10-11 16:53:21] -rw-r--r-- 2 boincer umatlas    569676 Oct 11 14:05 input.tar.gz
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas 198701542 Oct 11 16:51 HITS.pool.root.1
[2025-10-11 16:53:21] -rw------- 1 boincer umatlas   1822720 Oct 11 16:53 result.tar.gz
16:53:22 (13567): run_atlas exited; CPU time 75002.618296
16:53:22 (13567): called boinc_finish(0)

</stderr_txt>
]]>

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