Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:46:44 (1666715): wrapper (7.7.26015): starting
17:46:44 (1666715): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 17:46:44] Arguments: --nthreads 9
[2025-10-11 17:46:44] Threads: 9
[2025-10-11 17:46:44] Checking for CVMFS
[2025-10-11 17:46:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:46:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:46:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:47:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:47:05] 2.13.2.0 1149533 128364 377420 151597 3 667 27731313 32935937 41197 16776704 0 253624520 99.627 236571275 20626 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 17:47:05] CVMFS is ok
[2025-10-11 17:47:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:47:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:47:05] Further information can be found at the LHC@home message board.
[2025-10-11 17:47:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:47:05] Checking for apptainer binary...
[2025-10-11 17:47:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:47:06] Running /usr/bin/apptainer --version
[2025-10-11 17:47:06] apptainer version 1.4.3-1.el9
[2025-10-11 17:47:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:47:07] c6-2-11-4.aglt2.org
[2025-10-11 17:47:07] apptainer works
[2025-10-11 17:47:07] Set ATHENA_PROC_NUMBER=9
[2025-10-11 17:47:07] Set ATHENA_CORE_NUMBER=9
[2025-10-11 17:47:07] Starting ATLAS job with PandaID=6838200086
[2025-10-11 17:47:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:49:08]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:49:08] 2025-10-12 03:48:02,420 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2739.164177083334
[2025-10-11 23:49:08] 2025-10-12 03:48:02,442 | INFO     | monitor loop #1072: job 0:6838200086 is in state 'finished'
[2025-10-11 23:49:08] 2025-10-12 03:48:02,442 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:49:08] 2025-10-12 03:48:02,569 | INFO     | time since job start (21581s) is within the limit (172800.0s)
[2025-10-11 23:49:08] 2025-10-12 03:48:02,576 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6838200086/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:49:08] 2025-10-12 03:48:02,576 | INFO     | extracted standard info from prmon json
[2025-10-11 23:49:08] 2025-10-12 03:48:02,577 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 23:49:08] 2025-10-12 03:48:02,577 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:49:08] 2025-10-12 03:48:02,577 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:49:08] 2025-10-12 03:48:02,577 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:49:08] 2025-10-12 03:48:02,617 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:49:08] 2025-10-12 03:48:02,618 | INFO     | sum of square deviations: 13408790706.974306
[2025-10-11 23:49:08] 2025-10-12 03:48:02,625 | INFO     | sum of deviations: 129688895090.86319
[2025-10-11 23:49:08] 2025-10-12 03:48:02,625 | INFO     | mean x: 1760230127.2136753
[2025-10-11 23:49:08] 2025-10-12 03:48:02,625 | INFO     | mean y: 2126880.6951566953
[2025-10-11 23:49:08] 2025-10-12 03:48:02,625 | INFO     | -- intersect: -17022697004.821589
[2025-10-11 23:49:08] 2025-10-12 03:48:02,625 | INFO     | intersect: -17022697004.821589
[2025-10-11 23:49:08] 2025-10-12 03:48:02,626 | INFO     | chi2: 3.037571926384165
[2025-10-11 23:49:08] 2025-10-12 03:48:02,626 | INFO     | sum of square deviations: 12843900664.242764
[2025-10-11 23:49:08] 2025-10-12 03:48:02,633 | INFO     | sum of deviations: 149088544049.68216
[2025-10-11 23:49:08] 2025-10-12 03:48:02,633 | INFO     | mean x: 1760229974.716763
[2025-10-11 23:49:08] 2025-10-12 03:48:02,633 | INFO     | mean y: 2132061.5375722544
[2025-10-11 23:49:08] 2025-10-12 03:48:02,633 | INFO     | -- intersect: -20430144003.453556
[2025-10-11 23:49:08] 2025-10-12 03:48:02,634 | INFO     | intersect: -20430144003.453556
[2025-10-11 23:49:08] 2025-10-12 03:48:02,634 | INFO     | chi2: 2.350766424294519
[2025-10-11 23:49:08] 2025-10-12 03:48:02,634 | INFO     | current chi2=2.350766424294519 (change=22.610345326281664 %)
[2025-10-11 23:49:08] 2025-10-12 03:48:02,634 | INFO     | right removable region: 345
[2025-10-11 23:49:08] 2025-10-12 03:48:02,635 | INFO     | sum of square deviations: 12843854914.242767
[2025-10-11 23:49:08] 2025-10-12 03:48:02,641 | INFO     | sum of deviations: 68600036700.21396
[2025-10-11 23:49:08] 2025-10-12 03:48:02,642 | INFO     | mean x: 1760230279.716763
[2025-10-11 23:49:08] 2025-10-12 03:48:02,642 | INFO     | mean y: 2143298.583815029
[2025-10-11 23:49:08] 2025-10-12 03:48:02,642 | INFO     | -- intersect: -9399384715.836065
[2025-10-11 23:49:08] 2025-10-12 03:48:02,642 | INFO     | intersect: -9399384715.836065
[2025-10-11 23:49:08] 2025-10-12 03:48:02,642 | INFO     | chi2: 1.163746409846145
[2025-10-11 23:49:08] 2025-10-12 03:48:02,643 | INFO     | current chi2=1.163746409846145 (change=61.68826819414828 %)
[2025-10-11 23:49:08] 2025-10-12 03:48:02,643 | INFO     | sum of square deviations: 12295054291.372417
[2025-10-11 23:49:08] 2025-10-12 03:48:02,650 | INFO     | sum of deviations: 47345577257.75955
[2025-10-11 23:49:08] 2025-10-12 03:48:02,650 | INFO     | mean x: 1760230432.2140763
[2025-10-11 23:49:08] 2025-10-12 03:48:02,650 | INFO     | mean y: 2149193.633431085
[2025-10-11 23:49:08] 2025-10-12 03:48:02,650 | INFO     | -- intersect: -6776114972.172739
[2025-10-11 23:49:08] 2025-10-12 03:48:02,650 | INFO     | intersect: -6776114972.172739
[2025-10-11 23:49:08] 2025-10-12 03:48:02,651 | INFO     | chi2: 1.0101123946197035
[2025-10-11 23:49:08] 2025-10-12 03:48:02,651 | INFO     | current chi2=1.0101123946197035 (change=13.20167468845321 %)
[2025-10-11 23:49:08] 2025-10-12 03:48:02,658 | INFO     | left removable region: 20
[2025-10-11 23:49:08] 2025-10-12 03:48:02,658 | INFO     | sum of square deviations: 10644292175.489271
[2025-10-11 23:49:08] 2025-10-12 03:48:02,661 | INFO     | sum of deviations: 57606986519.71693
[2025-10-11 23:49:08] 2025-10-12 03:48:02,661 | INFO     | mean x: 1760230554.2184615
[2025-10-11 23:49:08] 2025-10-12 03:48:02,661 | INFO     | mean y: 2157747.3138461537
[2025-10-11 23:49:08] 2025-10-12 03:48:02,661 | INFO     | -- intersect: -9524222789.473307
[2025-10-11 23:49:08] 2025-10-12 03:48:02,661 | INFO     | intersect: -9524222789.473307
[2025-10-11 23:49:08] 2025-10-12 03:48:02,666 | INFO     | chi2: 0.30009534778075
[2025-10-11 23:49:08] 2025-10-12 03:48:02,666 | INFO     | -- intersect: -9524222789.473307
[2025-10-11 23:49:08] 2025-10-12 03:48:02,666 | INFO     | current memory leak: 5.41 B/s (using 325 data points, chi2=0.30)
[2025-10-11 23:49:08] 2025-10-12 03:48:02,667 | INFO     | could have reported an average CPU frequency of 2669 MHz (15 samples)
[2025-10-11 23:49:08] 2025-10-12 03:48:02,667 | INFO     | ..............................
[2025-10-11 23:49:08] 2025-10-12 03:48:02,667 | INFO     | . Timing measurements:
[2025-10-11 23:49:08] 2025-10-12 03:48:02,667 | INFO     | . get job = 0 s
[2025-10-11 23:49:08] 2025-10-12 03:48:02,668 | INFO     | . initial setup = 6 s
[2025-10-11 23:49:08] 2025-10-12 03:48:02,668 | INFO     | . payload setup = 46 s
[2025-10-11 23:49:08] 2025-10-12 03:48:02,668 | INFO     | . stage-in = 0 s
[2025-10-11 23:49:08] 2025-10-12 03:48:02,668 | INFO     | . payload execution = 21415 s
[2025-10-11 23:49:08] 2025-10-12 03:48:02,668 | INFO     | . stage-out = 6 s
[2025-10-11 23:49:08] 2025-10-12 03:48:02,668 | INFO     | . log creation = 0 s
[2025-10-11 23:49:08] 2025-10-12 03:48:02,668 | INFO     | ..............................
[2025-10-11 23:49:08] 2025-10-12 03:48:02,917 | INFO     | 
[2025-10-11 23:49:08] 2025-10-12 03:48:02,917 | INFO     | job summary report
[2025-10-11 23:49:08] 2025-10-12 03:48:02,917 | INFO     | --------------------------------------------------
[2025-10-11 23:49:08] 2025-10-12 03:48:02,917 | INFO     | PanDA job id: 6838200086
[2025-10-11 23:49:08] 2025-10-12 03:48:02,917 | INFO     | task id: 46676269
[2025-10-11 23:49:08] 2025-10-12 03:48:02,917 | INFO     | errors: (none)
[2025-10-11 23:49:08] 2025-10-12 03:48:02,917 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:49:08] 2025-10-12 03:48:02,918 | INFO     | pilot state: finished 
[2025-10-11 23:49:08] 2025-10-12 03:48:02,918 | INFO     | transexitcode: 0
[2025-10-11 23:49:08] 2025-10-12 03:48:02,918 | INFO     | exeerrorcode: 0
[2025-10-11 23:49:08] 2025-10-12 03:48:02,918 | INFO     | exeerrordiag: 
[2025-10-11 23:49:08] 2025-10-12 03:48:02,918 | INFO     | exitcode: 0
[2025-10-11 23:49:08] 2025-10-12 03:48:02,918 | INFO     | exitmsg: OK
[2025-10-11 23:49:08] 2025-10-12 03:48:02,918 | INFO     | cpuconsumptiontime: 45974 s
[2025-10-11 23:49:08] 2025-10-12 03:48:02,918 | INFO     | nevents: 400
[2025-10-11 23:49:08] 2025-10-12 03:48:02,918 | INFO     | neventsw: 0
[2025-10-11 23:49:08] 2025-10-12 03:48:02,918 | INFO     | pid: 1699419
[2025-10-11 23:49:08] 2025-10-12 03:48:02,918 | INFO     | pgrp: 1699419
[2025-10-11 23:49:08] 2025-10-12 03:48:02,918 | INFO     | corecount: 9
[2025-10-11 23:49:08] 2025-10-12 03:48:02,918 | INFO     | event service: False
[2025-10-11 23:49:08] 2025-10-12 03:48:02,918 | INFO     | sizes: {0: 2348630, 1: 2348686, 2: 2348742, 3: 2348913, 4: 2348941, 15: 2348969, 27: 2349125, 33: 2349415, 38: 2349471, 21465: 2382977, 21466: 2382976, 21474: 2392
[2025-10-11 23:49:08] 2025-10-12 03:48:02,919 | INFO     | --------------------------------------------------
[2025-10-11 23:49:08] 2025-10-12 03:48:02,919 | INFO     | 
[2025-10-11 23:49:08] 2025-10-12 03:48:02,919 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 23:49:08] 2025-10-12 03:48:03,025 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,025 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,025 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,025 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,028 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:49:08] 2025-10-12 03:48:03,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,039 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:49:08] 2025-10-12 03:48:03,039 | INFO     | job 6838200086 has completed (purged errors)
[2025-10-11 23:49:08] 2025-10-12 03:48:03,039 | INFO     | overall cleanup function is called
[2025-10-11 23:49:08] 2025-10-12 03:48:04,049 | INFO     | --- collectZombieJob: --- 10, [1699419]
[2025-10-11 23:49:08] 2025-10-12 03:48:04,049 | INFO     | zombie collector waiting for pid 1699419
[2025-10-11 23:49:08] 2025-10-12 03:48:04,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:49:08] 2025-10-12 03:48:04,049 | INFO     | collected zombie processes
[2025-10-11 23:49:08] 2025-10-12 03:48:04,049 | INFO     | will attempt to kill all subprocesses of pid=1699419
[2025-10-11 23:49:08] 2025-10-12 03:48:05,377 | INFO     | process IDs to be killed: [1699419] (in reverse order)
[2025-10-11 23:49:08] 2025-10-12 03:48:05,739 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:49:08] 2025-10-12 03:48:05,740 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:49:08] 2025-10-12 03:48:05,867 | INFO     | did not find any defunct processes belonging to 1699419
[2025-10-11 23:49:08] 2025-10-12 03:48:06,002 | INFO     | did not find any defunct processes belonging to 1699419
[2025-10-11 23:49:08] 2025-10-12 03:48:06,002 | INFO     | ready for new job
[2025-10-11 23:49:08] 2025-10-12 03:48:06,002 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:49:08] 2025-10-12 03:48:06,023 | INFO     | ***************************************
[2025-10-11 23:49:08] 2025-10-12 03:48:06,023 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:49:08] 2025-10-12 03:48:06,023 | INFO     | ***************************************
[2025-10-11 23:49:08] 2025-10-12 03:48:06,023 | INFO     | 
[2025-10-11 23:49:08] 2025-10-12 03:48:06,072 | INFO     | architecture information:
[2025-10-11 23:49:08] 2025-10-12 03:48:06,077 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:49:08] 2025-10-12 03:48:06,184 | INFO     | cat /etc/os-release:
[2025-10-11 23:49:08] NAME="CentOS Linux"
[2025-10-11 23:49:08] VERSION="7 (Core)"
[2025-10-11 23:49:08] ID="centos"
[2025-10-11 23:49:08] ID_LIKE="rhel fedora"
[2025-10-11 23:49:08] VERSION_ID="7"
[2025-10-11 23:49:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:49:08] ANSI_COLOR="0;31"
[2025-10-11 23:49:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:49:08] HOME_URL="https://www.centos.org/"
[2025-10-11 23:49:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:49:08] 
[2025-10-11 23:49:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:49:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:49:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:49:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:49:08] 
[2025-10-11 23:49:08] 2025-10-12 03:48:06,185 | INFO     | ***************************************
[2025-10-11 23:49:08] 2025-10-12 03:48:06,690 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 23:49:08] 2025-10-12 03:48:06,753 | INFO     | sufficient remaining disk space (93800366080 B)
[2025-10-11 23:49:08] 2025-10-12 03:48:06,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:49:08] 2025-10-12 03:48:06,754 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:49:08] 2025-10-12 03:48:06,754 | INFO     | update_server=False
[2025-10-11 23:49:08] 2025-10-12 03:48:06,754 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:49:08] 2025-10-12 03:48:06,754 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:49:08] 2025-10-12 03:48:06,755 | INFO     | aborting loop
[2025-10-11 23:49:08] 2025-10-12 03:48:06,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:49:08] 2025-10-12 03:48:07,171 | INFO     | all payload control threads have been joined
[2025-10-11 23:49:08] 2025-10-12 03:48:07,325 | INFO     | all data control threads have been joined
[2025-10-11 23:49:08] 2025-10-12 03:48:07,760 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:07,761 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:07,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:49:08] 2025-10-12 03:48:07,961 | INFO     | [job] validate thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:07,962 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:08,039 | INFO     | all job control threads have been joined
[2025-10-11 23:49:08] 2025-10-12 03:48:08,177 | INFO     | [payload] control thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:08,331 | INFO     | [data] control thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:08,384 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:08,418 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:08,734 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:08,762 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:08,857 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:08,857 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:08,923 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:09,034 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:09,045 | INFO     | [job] control thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:10,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:49:08] 2025-10-12 03:48:13,187 [wrapper] supervise_pilot (15 min periods counter: 25)
[2025-10-11 23:49:08] 2025-10-12 03:48:14,224 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:49:08] 2025-10-12 03:48:42,864 | INFO     | PID=1679620 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 23:49:08] 2025-10-12 03:48:42,865 | INFO     | .. there are 56 such processes running
[2025-10-11 23:49:08] 2025-10-12 03:48:42,925 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:49:08] 2025-10-12 03:48:42,925 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:49:08] 2025-10-12 03:48:42,925 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:49:08] 2025-10-12 03:49:00,634 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:49:08] 2025-10-12 03:49:01,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140117422061376)>', '<ExcThread(monitor, started 140116798469888)>']
[2025-10-11 23:49:08] 2025-10-12 03:49:02,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:49:08] 2025-10-12 03:49:02,070 | INFO     | [monitor] control thread has ended
[2025-10-11 23:49:08] 2025-10-12 03:49:06,337 | INFO     | all workflow threads have been joined
[2025-10-11 23:49:08] 2025-10-12 03:49:06,337 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:49:08] 2025-10-12 03:49:06,337 | INFO     | traces error code: 0
[2025-10-11 23:49:08] 2025-10-12 03:49:06,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:49:08] 2025-10-12 03:49:06,788 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:49:08] 2025-10-12 03:49:06,811 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:49:08] 2025-10-12 03:49:06,837 [wrapper] pilotpid: 1679620
[2025-10-11 23:49:08] 2025-10-12 03:49:06,853 [wrapper] Pilot exit status: 0
[2025-10-11 23:49:08] 2025-10-12 03:49:06,992 [wrapper] pandaids: 6838200086
[2025-10-11 23:49:08] 2025-10-12 03:49:08,251 [wrapper] cleanup supervisor_pilot 3456449 1679622
[2025-10-11 23:49:08] 2025-10-12 03:49:08,279 [wrapper] Test setup, not cleaning
[2025-10-11 23:49:08] 2025-10-12 03:49:08,291 [wrapper] apfmon messages muted
[2025-10-11 23:49:08] 2025-10-12 03:49:08,315 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:49:08] 2025-10-12 03:49:08,334 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:49:08]  *** Error codes and diagnostics ***
[2025-10-11 23:49:08]     "exeErrorCode": 0,
[2025-10-11 23:49:08]     "exeErrorDiag": "",
[2025-10-11 23:49:08]     "pilotErrorCode": 0,
[2025-10-11 23:49:08]     "pilotErrorDiag": "",
[2025-10-11 23:49:08]  *** Listing of results directory ***
[2025-10-11 23:49:08] total 405476
[2025-10-11 23:49:08] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 03:43 pilot3.tar.gz
[2025-10-11 23:49:08] -rwx------. 1 boincer umatlas     36292 Oct 11 03:51 runpilot2-wrapper.sh
[2025-10-11 23:49:08] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 03:51 queuedata.json
[2025-10-11 23:49:08] -rw-r--r--. 1 boincer umatlas       100 Oct 11 17:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:49:08] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 17:46 run_atlas
[2025-10-11 23:49:08] -rw-r--r--. 1 boincer umatlas       105 Oct 11 17:46 job.xml
[2025-10-11 23:49:08] -rw-r--r--. 2 boincer umatlas 220528179 Oct 11 17:46 EVNT.46676267._002160.pool.root.1
[2025-10-11 23:49:08] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 17:46 shared
[2025-10-11 23:49:08] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 17:46 input.tar.gz
[2025-10-11 23:49:08] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 17:46 start_atlas.sh
[2025-10-11 23:49:08] -rw-r--r--. 1 boincer umatlas         0 Oct 11 17:46 boinc_lockfile
[2025-10-11 23:49:08] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 17:47 pandaJob.out
[2025-10-11 23:49:08] -rw-------. 1 boincer umatlas    975528 Oct 11 17:48 agis_schedconf.cvmfs.json
[2025-10-11 23:49:08] drwx------. 5 boincer umatlas      4096 Oct 11 17:48 pilot3
[2025-10-11 23:49:08] -rw-------. 1 boincer umatlas 184932478 Oct 11 23:46 HITS.46676269._053837.pool.root.1
[2025-10-11 23:49:08] -rw-r--r--. 1 boincer umatlas       531 Oct 11 23:46 boinc_task_state.xml
[2025-10-11 23:49:08] -rw-------. 1 boincer umatlas      1056 Oct 11 23:47 memory_monitor_summary.json
[2025-10-11 23:49:08] -rw-------. 1 boincer umatlas   1560580 Oct 11 23:47 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:49:08] -rw-------. 1 boincer umatlas    557224 Oct 11 23:47 log.46676269._053837.job.log.tgz.1
[2025-10-11 23:49:08] -rw-------. 1 boincer umatlas      7830 Oct 11 23:48 heartbeat.json
[2025-10-11 23:49:08] -rw-r--r--. 1 boincer umatlas      6858 Oct 11 23:48 init_data.xml
[2025-10-11 23:49:08] -rw-------. 1 boincer umatlas        95 Oct 11 23:48 pilot_heartbeat.json
[2025-10-11 23:49:08] -rw-r--r--. 1 boincer umatlas        28 Oct 11 23:49 wrapper_checkpoint.txt
[2025-10-11 23:49:08] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 23:49 boinc_mmap_file
[2025-10-11 23:49:08] -rw-------. 1 boincer umatlas      4824 Oct 11 23:49 pilotlog.txt
[2025-10-11 23:49:08] -rw-------. 1 boincer umatlas   2366232 Oct 11 23:49 log.46676269._053837.job.log.1
[2025-10-11 23:49:08] -rw-------. 1 boincer umatlas       357 Oct 11 23:49 output.list
[2025-10-11 23:49:08] -rw-r--r--. 1 boincer umatlas       620 Oct 11 23:49 runtime_log
[2025-10-11 23:49:08] -rw-------. 1 boincer umatlas   2938880 Oct 11 23:49 result.tar.gz
[2025-10-11 23:49:08] -rw-r--r--. 1 boincer umatlas      8709 Oct 11 23:49 runtime_log.err
[2025-10-11 23:49:08] -rw-------. 1 boincer umatlas       657 Oct 11 23:49 ppMLDmBZjR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwURMDmqNri8m.diag
[2025-10-11 23:49:08] -rw-r--r--. 1 boincer umatlas     21262 Oct 11 23:49 stderr.txt
[2025-10-11 23:49:08] HITS file was successfully produced:
[2025-10-11 23:49:08] -rw-------. 1 boincer umatlas 184932478 Oct 11 23:46 shared/HITS.pool.root.1
[2025-10-11 23:49:08]  *** Contents of shared directory: ***
[2025-10-11 23:49:09] total 399412
[2025-10-11 23:49:09] -rw-r--r--. 2 boincer umatlas 220528179 Oct 11 17:46 ATLAS.root_0
[2025-10-11 23:49:09] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 17:46 input.tar.gz
[2025-10-11 23:49:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 17:46 start_atlas.sh
[2025-10-11 23:49:09] -rw-------. 1 boincer umatlas 184932478 Oct 11 23:46 HITS.pool.root.1
[2025-10-11 23:49:09] -rw-------. 1 boincer umatlas   2938880 Oct 11 23:49 result.tar.gz
23:49:10 (1666715): run_atlas exited; CPU time 47188.823495
23:49:10 (1666715): called boinc_finish(0)

</stderr_txt>
]]>

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