Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:01:11 (4573): wrapper (7.7.26015): starting
14:01:11 (4573): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 14:01:11] Arguments: --nthreads 12
[2025-10-11 14:01:11] Threads: 12
[2025-10-11 14:01:11] Checking for CVMFS
[2025-10-11 14:01:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:01:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:01:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:01:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:01:12] 2.11.2.0 3009 7041 87408 151591 3 57 17230525 20275201 1 130560 0 6383552 99.992 234273 45649 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 14:01:12] CVMFS is ok
[2025-10-11 14:01:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:01:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:01:12] Further information can be found at the LHC@home message board.
[2025-10-11 14:01:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:01:12] Checking for apptainer binary...
[2025-10-11 14:01:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:01:12] Running /usr/bin/apptainer --version
[2025-10-11 14:01:12] apptainer version 1.3.2-1.el7
[2025-10-11 14:01:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:01:13] c-115-42.aglt2.org
[2025-10-11 14:01:13] apptainer works
[2025-10-11 14:01:13] Set ATHENA_PROC_NUMBER=12
[2025-10-11 14:01:13] Set ATHENA_CORE_NUMBER=12
[2025-10-11 14:01:13] Starting ATLAS job with PandaID=6838294598
[2025-10-11 14:01:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:06:54]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:06:54]  replicas=None
[2025-10-11 15:06:54]  scope=mc23_13p6TeV
[2025-10-11 15:06:54]  status=None
[2025-10-11 15:06:54]  status_code=0
[2025-10-11 15:06:54]  storage_token=
[2025-10-11 15:06:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838294598/log.46676269._055593.job.log.tgz.1
[2025-10-11 15:06:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/a6/log.46676269._055593.job.log.tgz.1
[2025-10-11 15:06:54]  workdir=None
[2025-10-11 15:06:54] ]
[2025-10-11 15:06:54] 2025-10-11 19:06:15,104 | INFO     | transferring file log.46676269._055593.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838294598/log.46676269._055593.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 15:06:54] 2025-10-11 19:06:15,104 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838294598/log.46676269._055593.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._055593.job
[2025-10-11 15:06:54] 2025-10-11 19:06:15,126 | INFO     | adding to output.list: log.46676269._055593.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/a6/log.46676269._055593.job.log.tg
[2025-10-11 15:06:54] 2025-10-11 19:06:15,127 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 15:06:54] 2025-10-11 19:06:15,127 | INFO     | summary of transferred files:
[2025-10-11 15:06:54] 2025-10-11 19:06:15,127 | INFO     |  -- lfn=log.46676269._055593.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 15:06:54] 2025-10-11 19:06:15,127 | INFO     | stage-out finished correctly
[2025-10-11 15:06:54] 2025-10-11 19:06:15,139 | INFO     | monitor loop #291: job 0:6838294598 is in state 'finished'
[2025-10-11 15:06:54] 2025-10-11 19:06:15,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:06:54] 2025-10-11 19:06:15,361 | INFO     | time since job start (3887s) is within the limit (172800.0s)
[2025-10-11 15:06:54] 2025-10-11 19:06:17,368 | INFO     | time since job start (3889s) is within the limit (172800.0s)
[2025-10-11 15:06:54] 2025-10-11 19:06:17,607 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 15:06:54] 2025-10-11 19:06:17,652 | INFO     | monitor loop #292: job 0:6838294598 is in state 'finished'
[2025-10-11 15:06:54] 2025-10-11 19:06:17,657 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:06:54] 2025-10-11 19:06:17,687 | INFO     | job 6838294598 has state=finished
[2025-10-11 15:06:54] 2025-10-11 19:06:17,687 | INFO     | preparing for final server update for job 6838294598 in state='finished'
[2025-10-11 15:06:54] 2025-10-11 19:06:17,688 | INFO     | this job has now completed (state=finished)
[2025-10-11 15:06:54] 2025-10-11 19:06:17,688 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 15:06:54] 2025-10-11 19:06:17,689 | INFO     | log transfer has been attempted: DONE
[2025-10-11 15:06:54] 2025-10-11 19:06:17,689 | INFO     | job 6838294598 has finished - writing final server update
[2025-10-11 15:06:54] 2025-10-11 19:06:17,689 | INFO     | total number of processed events: 400 (read)
[2025-10-11 15:06:54] 2025-10-11 19:06:17,690 | INFO     | executing command: lscpu
[2025-10-11 15:06:54] 2025-10-11 19:06:17,717 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 15:06:54] 2025-10-11 19:06:19,373 | INFO     | time since job start (3891s) is within the limit (172800.0s)
[2025-10-11 15:06:54] 2025-10-11 19:06:19,375 | INFO     | 3893s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 15:06:54] 2025-10-11 19:06:20,166 | INFO     | monitor loop #293: job 0:6838294598 is in state 'finished'
[2025-10-11 15:06:54] 2025-10-11 19:06:20,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:06:54] 2025-10-11 19:06:21,382 | INFO     | time since job start (3893s) is within the limit (172800.0s)
[2025-10-11 15:06:54] 2025-10-11 19:06:22,167 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 15:06:54] 2025-10-11 19:06:22,171 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2025-10-11 15:06:54] 2025-10-11 19:06:22,173 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838294598/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:06:54] 2025-10-11 19:06:22,174 | INFO     | extracted standard info from prmon json
[2025-10-11 15:06:54] 2025-10-11 19:06:22,174 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 15:06:54] 2025-10-11 19:06:22,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 15:06:54] 2025-10-11 19:06:22,175 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:06:54] 2025-10-11 19:06:22,175 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:06:54] 2025-10-11 19:06:22,177 | INFO     | fitting pss+swap vs Time
[2025-10-11 15:06:54] 2025-10-11 19:06:22,177 | INFO     | sum of square deviations: 57407588.0
[2025-10-11 15:06:54] 2025-10-11 19:06:22,177 | INFO     | sum of deviations: 383619972.0
[2025-10-11 15:06:54] 2025-10-11 19:06:22,177 | INFO     | mean x: 1760207729.0
[2025-10-11 15:06:54] 2025-10-11 19:06:22,177 | INFO     | mean y: 2701624.4736842103
[2025-10-11 15:06:54] 2025-10-11 19:06:22,178 | INFO     | -- intersect: -11759695355.402279
[2025-10-11 15:06:54] 2025-10-11 19:06:22,178 | INFO     | intersect: -11759695355.402279
[2025-10-11 15:06:54] 2025-10-11 19:06:22,178 | INFO     | chi2: 0.0017714313241471802
[2025-10-11 15:06:54] 2025-10-11 19:06:22,178 | INFO     | -- intersect: -11759695355.402279
[2025-10-11 15:06:54] 2025-10-11 19:06:22,178 | INFO     | current memory leak: 6.68 B/s (using 57 data points, chi2=0.00)
[2025-10-11 15:06:54] 2025-10-11 19:06:22,178 | INFO     | could have reported an average CPU frequency of 2148 MHz (6 samples)
[2025-10-11 15:06:54] 2025-10-11 19:06:22,179 | INFO     | ..............................
[2025-10-11 15:06:54] 2025-10-11 19:06:22,179 | INFO     | . Timing measurements:
[2025-10-11 15:06:54] 2025-10-11 19:06:22,179 | INFO     | . get job = 0 s
[2025-10-11 15:06:54] 2025-10-11 19:06:22,179 | INFO     | . initial setup = 2 s
[2025-10-11 15:06:54] 2025-10-11 19:06:22,179 | INFO     | . payload setup = 6 s
[2025-10-11 15:06:54] 2025-10-11 19:06:22,179 | INFO     | . stage-in = 0 s
[2025-10-11 15:06:54] 2025-10-11 19:06:22,179 | INFO     | . payload execution = 3858 s
[2025-10-11 15:06:54] 2025-10-11 19:06:22,179 | INFO     | . stage-out = 0 s
[2025-10-11 15:06:54] 2025-10-11 19:06:22,179 | INFO     | . log creation = 0 s
[2025-10-11 15:06:54] 2025-10-11 19:06:22,179 | INFO     | ..............................
[2025-10-11 15:06:54] 2025-10-11 19:06:22,256 | INFO     | 
[2025-10-11 15:06:54] 2025-10-11 19:06:22,256 | INFO     | job summary report
[2025-10-11 15:06:54] 2025-10-11 19:06:22,256 | INFO     | --------------------------------------------------
[2025-10-11 15:06:54] 2025-10-11 19:06:22,256 | INFO     | PanDA job id: 6838294598
[2025-10-11 15:06:54] 2025-10-11 19:06:22,256 | INFO     | task id: 46676269
[2025-10-11 15:06:54] 2025-10-11 19:06:22,256 | INFO     | errors: (none)
[2025-10-11 15:06:54] 2025-10-11 19:06:22,256 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:06:54] 2025-10-11 19:06:22,257 | INFO     | pilot state: finished 
[2025-10-11 15:06:54] 2025-10-11 19:06:22,257 | INFO     | transexitcode: 0
[2025-10-11 15:06:54] 2025-10-11 19:06:22,257 | INFO     | exeerrorcode: 0
[2025-10-11 15:06:54] 2025-10-11 19:06:22,257 | INFO     | exeerrordiag: 
[2025-10-11 15:06:54] 2025-10-11 19:06:22,257 | INFO     | exitcode: 0
[2025-10-11 15:06:54] 2025-10-11 19:06:22,257 | INFO     | exitmsg: OK
[2025-10-11 15:06:54] 2025-10-11 19:06:22,257 | INFO     | cpuconsumptiontime: 41479 s
[2025-10-11 15:06:54] 2025-10-11 19:06:22,257 | INFO     | nevents: 400
[2025-10-11 15:06:54] 2025-10-11 19:06:22,257 | INFO     | neventsw: 0
[2025-10-11 15:06:54] 2025-10-11 19:06:22,257 | INFO     | pid: 14771
[2025-10-11 15:06:54] 2025-10-11 19:06:22,257 | INFO     | pgrp: 14771
[2025-10-11 15:06:54] 2025-10-11 19:06:22,258 | INFO     | corecount: 12
[2025-10-11 15:06:54] 2025-10-11 19:06:22,258 | INFO     | event service: False
[2025-10-11 15:06:54] 2025-10-11 19:06:22,258 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 3869: 2374961, 3870: 2374960, 3872: 2384014, 3874: 2384198, 3879: 2384392}
[2025-10-11 15:06:54] 2025-10-11 19:06:22,258 | INFO     | --------------------------------------------------
[2025-10-11 15:06:54] 2025-10-11 19:06:22,258 | INFO     | 
[2025-10-11 15:06:54] 2025-10-11 19:06:22,258 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 15:06:54] 2025-10-11 19:06:22,281 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,281 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,281 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,282 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:06:54] 2025-10-11 19:06:22,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:06:54] 2025-10-11 19:06:22,285 | INFO     | job 6838294598 has completed (purged errors)
[2025-10-11 15:06:54] 2025-10-11 19:06:22,285 | INFO     | overall cleanup function is called
[2025-10-11 15:06:54] 2025-10-11 19:06:23,292 | INFO     | --- collectZombieJob: --- 10, [14771]
[2025-10-11 15:06:54] 2025-10-11 19:06:23,292 | INFO     | zombie collector waiting for pid 14771
[2025-10-11 15:06:54] 2025-10-11 19:06:23,292 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:06:54] 2025-10-11 19:06:23,292 | INFO     | collected zombie processes
[2025-10-11 15:06:54] 2025-10-11 19:06:23,292 | INFO     | will attempt to kill all subprocesses of pid=14771
[2025-10-11 15:06:54] 2025-10-11 19:06:23,382 | INFO     | process IDs to be killed: [14771] (in reverse order)
[2025-10-11 15:06:54] 2025-10-11 19:06:23,433 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:06:54] 2025-10-11 19:06:23,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:06:54] 2025-10-11 19:06:23,437 | INFO     | did not find any defunct processes belonging to 14771
[2025-10-11 15:06:54] 2025-10-11 19:06:23,439 | INFO     | did not find any defunct processes belonging to 14771
[2025-10-11 15:06:54] 2025-10-11 19:06:23,440 | INFO     | ready for new job
[2025-10-11 15:06:54] 2025-10-11 19:06:23,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:06:54] 2025-10-11 19:06:23,441 | INFO     | ***************************************
[2025-10-11 15:06:54] 2025-10-11 19:06:23,441 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:06:54] 2025-10-11 19:06:23,441 | INFO     | ***************************************
[2025-10-11 15:06:54] 2025-10-11 19:06:23,442 | INFO     | 
[2025-10-11 15:06:54] 2025-10-11 19:06:23,442 | INFO     | architecture information:
[2025-10-11 15:06:54] 2025-10-11 19:06:23,443 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:06:54] 2025-10-11 19:06:23,458 | INFO     | cat /etc/os-release:
[2025-10-11 15:06:54] NAME="CentOS Linux"
[2025-10-11 15:06:54] VERSION="7 (Core)"
[2025-10-11 15:06:54] ID="centos"
[2025-10-11 15:06:54] ID_LIKE="rhel fedora"
[2025-10-11 15:06:54] VERSION_ID="7"
[2025-10-11 15:06:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:06:54] ANSI_COLOR="0;31"
[2025-10-11 15:06:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:06:54] HOME_URL="https://www.centos.org/"
[2025-10-11 15:06:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:06:54] 
[2025-10-11 15:06:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:06:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:06:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:06:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:06:54] 
[2025-10-11 15:06:54] 2025-10-11 19:06:23,458 | INFO     | ***************************************
[2025-10-11 15:06:54] 2025-10-11 19:06:23,961 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 15:06:54] 2025-10-11 19:06:23,977 | INFO     | sufficient remaining disk space (18591252480 B)
[2025-10-11 15:06:54] 2025-10-11 19:06:23,977 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:06:54] 2025-10-11 19:06:23,977 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:06:54] 2025-10-11 19:06:23,977 | INFO     | update_server=False
[2025-10-11 15:06:54] 2025-10-11 19:06:23,978 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:06:54] 2025-10-11 19:06:23,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:06:54] 2025-10-11 19:06:23,978 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:06:54] 2025-10-11 19:06:23,979 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:06:54] 2025-10-11 19:06:23,979 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:06:54] 2025-10-11 19:06:23,979 | INFO     | aborting loop
[2025-10-11 15:06:54] 2025-10-11 19:06:24,054 | INFO     | all data control threads have been joined
[2025-10-11 15:06:54] 2025-10-11 19:06:24,852 | INFO     | all job control threads have been joined
[2025-10-11 15:06:54] 2025-10-11 19:06:24,979 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:24,982 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:24,983 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:24,998 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:25,060 | INFO     | [data] control thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:25,068 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:25,252 | INFO     | all payload control threads have been joined
[2025-10-11 15:06:54] 2025-10-11 19:06:25,559 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:25,788 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:25,794 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:25,857 | INFO     | [job] control thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:25,984 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:26,038 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:26,063 | INFO     | [job] validate thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:26,257 | INFO     | [payload] control thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:26,384 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:27,985 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:06:54] 2025-10-11 19:06:33,710 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:06:54] 2025-10-11 19:06:35,529 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310150031168)>', '<ExcThread(monitor, started 140309048579840)>']
[2025-10-11 15:06:54] 2025-10-11 19:06:40,555 | INFO     | all workflow threads have been joined
[2025-10-11 15:06:54] 2025-10-11 19:06:40,555 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:06:54] 2025-10-11 19:06:40,555 | INFO     | traces error code: 0
[2025-10-11 15:06:54] 2025-10-11 19:06:40,556 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:06:54] 2025-10-11 19:06:54,579 | INFO     | PID=8396 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 15:06:54] 2025-10-11 19:06:54,579 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:06:54] 2025-10-11 19:06:54,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:06:54] 2025-10-11 19:06:54,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:06:54] 2025-10-11 19:06:54,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:06:54] 2025-10-11 19:06:54,580 | INFO     | [monitor] control thread has ended
[2025-10-11 15:06:54] 2025-10-11 19:06:54,671 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:06:54] 2025-10-11 19:06:54,675 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:06:54] 2025-10-11 19:06:54,679 [wrapper] pilotpid: 8396
[2025-10-11 15:06:54] 2025-10-11 19:06:54,682 [wrapper] Pilot exit status: 0
[2025-10-11 15:06:54] 2025-10-11 19:06:54,699 [wrapper] pandaids: 6838294598
[2025-10-11 15:06:54] 2025-10-11 19:06:54,738 [wrapper] cleanup supervisor_pilot 11078 8397
[2025-10-11 15:06:54] 2025-10-11 19:06:54,742 [wrapper] Test setup, not cleaning
[2025-10-11 15:06:54] 2025-10-11 19:06:54,746 [wrapper] apfmon messages muted
[2025-10-11 15:06:54] 2025-10-11 19:06:54,750 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:06:54] 2025-10-11 19:06:54,753 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:06:54]  *** Error codes and diagnostics ***
[2025-10-11 15:06:54]     "exeErrorCode": 0,
[2025-10-11 15:06:54]     "exeErrorDiag": "",
[2025-10-11 15:06:54]     "pilotErrorCode": 0,
[2025-10-11 15:06:54]     "pilotErrorDiag": "",
[2025-10-11 15:06:54]  *** Listing of results directory ***
[2025-10-11 15:06:54] total 409212
[2025-10-11 15:06:54] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 05:50 pilot3.tar.gz
[2025-10-11 15:06:54] -rwx------ 1 boincer umatlas     36292 Oct 11 06:00 runpilot2-wrapper.sh
[2025-10-11 15:06:54] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 06:00 queuedata.json
[2025-10-11 15:06:54] -rw-r--r-- 1 boincer umatlas       100 Oct 11 14:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:06:54] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 14:01 run_atlas
[2025-10-11 15:06:54] -rw-r--r-- 1 boincer umatlas       105 Oct 11 14:01 job.xml
[2025-10-11 15:06:54] -rw-r--r-- 2 boincer umatlas 218516141 Oct 11 14:01 EVNT.46676267._002230.pool.root.1
[2025-10-11 15:06:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 14:01 start_atlas.sh
[2025-10-11 15:06:54] drwxrwx--x 2 boincer umatlas      4096 Oct 11 14:01 shared
[2025-10-11 15:06:54] -rw-r--r-- 2 boincer umatlas    569679 Oct 11 14:01 input.tar.gz
[2025-10-11 15:06:54] -rw-r--r-- 1 boincer umatlas         0 Oct 11 14:01 boinc_lockfile
[2025-10-11 15:06:54] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 14:01 pandaJob.out
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas    975520 Oct 11 14:01 agis_schedconf.cvmfs.json
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas   1560580 Oct 11 14:01 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:06:54] drwx------ 5 boincer umatlas      4096 Oct 11 14:01 pilot3
[2025-10-11 15:06:54] -rw-r--r-- 1 boincer umatlas      5954 Oct 11 15:01 init_data.xml
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas 194710613 Oct 11 15:05 HITS.46676269._055593.pool.root.1
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas      1050 Oct 11 15:06 memory_monitor_summary.json
[2025-10-11 15:06:54] -rw-r--r-- 1 boincer umatlas       529 Oct 11 15:06 boinc_task_state.xml
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas    379047 Oct 11 15:06 log.46676269._055593.job.log.tgz.1
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas        95 Oct 11 15:06 pilot_heartbeat.json
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas      7864 Oct 11 15:06 heartbeat.json
[2025-10-11 15:06:54] -rw-r--r-- 1 boincer umatlas        27 Oct 11 15:06 wrapper_checkpoint.txt
[2025-10-11 15:06:54] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 15:06 boinc_mmap_file
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas       744 Oct 11 15:06 pilotlog.txt
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas    573450 Oct 11 15:06 log.46676269._055593.job.log.1
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas       357 Oct 11 15:06 output.list
[2025-10-11 15:06:54] -rw-r--r-- 1 boincer umatlas       620 Oct 11 15:06 runtime_log
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas    972800 Oct 11 15:06 result.tar.gz
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas       659 Oct 11 15:06 rzEMDm4ZlR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm95fNDm4HhcHo.diag
[2025-10-11 15:06:54] -rw-r--r-- 1 boincer umatlas      8705 Oct 11 15:06 runtime_log.err
[2025-10-11 15:06:54] -rw-r--r-- 1 boincer umatlas     21855 Oct 11 15:06 stderr.txt
[2025-10-11 15:06:54] HITS file was successfully produced:
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas 194710613 Oct 11 15:05 shared/HITS.pool.root.1
[2025-10-11 15:06:54]  *** Contents of shared directory: ***
[2025-10-11 15:06:54] total 405076
[2025-10-11 15:06:54] -rw-r--r-- 2 boincer umatlas 218516141 Oct 11 14:01 ATLAS.root_0
[2025-10-11 15:06:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 14:01 start_atlas.sh
[2025-10-11 15:06:54] -rw-r--r-- 2 boincer umatlas    569679 Oct 11 14:01 input.tar.gz
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas 194710613 Oct 11 15:05 HITS.pool.root.1
[2025-10-11 15:06:54] -rw------- 1 boincer umatlas    972800 Oct 11 15:06 result.tar.gz
15:06:55 (4573): run_atlas exited; CPU time 41474.979575
15:06:55 (4573): called boinc_finish(0)

</stderr_txt>
]]>

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