Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:26:29 (3649407): wrapper (7.7.26015): starting
06:26:29 (3649407): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 06:26:29] Arguments: --nthreads 4
[2025-10-13 06:26:29] Threads: 4
[2025-10-13 06:26:29] Checking for CVMFS
[2025-10-13 06:26:29] No cvmfs_config command found, will try listing directly
[2025-10-13 06:26:29] CVMFS is ok
[2025-10-13 06:26:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:26:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:26:29] Further information can be found at the LHC@home message board.
[2025-10-13 06:26:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:26:29] Checking for apptainer binary...
[2025-10-13 06:26:29] which: no apptainer in ((null))
[2025-10-13 06:26:29] apptainer is not installed, using version from CVMFS
[2025-10-13 06:26:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:26:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-10-13 06:26:29] apptainer works
[2025-10-13 06:26:29] Set ATHENA_PROC_NUMBER=4
[2025-10-13 06:26:29] Set ATHENA_CORE_NUMBER=4
[2025-10-13 06:26:30] Starting ATLAS job with PandaID=6838200276
[2025-10-13 06:26:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:54:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:54:38] 2025-10-13 06:45:25,073 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 08:54:38] 2025-10-13 06:45:25,093 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2744.693484375
[2025-10-13 08:54:38] 2025-10-13 06:45:25,118 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6838200276/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:54:38] 2025-10-13 06:45:25,118 | INFO     | extracted standard info from prmon json
[2025-10-13 08:54:38] 2025-10-13 06:45:25,119 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 08:54:38] 2025-10-13 06:45:25,119 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:54:38] 2025-10-13 06:45:25,119 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:54:38] 2025-10-13 06:45:25,119 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:54:38] 2025-10-13 06:45:25,122 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:54:38] 2025-10-13 06:45:25,122 | INFO     | sum of square deviations: 779958810.0
[2025-10-13 08:54:38] 2025-10-13 06:45:25,123 | INFO     | sum of deviations: -15804120401.0
[2025-10-13 08:54:38] 2025-10-13 06:45:25,123 | INFO     | mean x: 1760333755.5
[2025-10-13 08:54:38] 2025-10-13 06:45:25,123 | INFO     | mean y: 2391176.044117647
[2025-10-13 08:54:38] 2025-10-13 06:45:25,123 | INFO     | -- intersect: 35671616603.302895
[2025-10-13 08:54:38] 2025-10-13 06:45:25,123 | INFO     | intersect: 35671616603.302895
[2025-10-13 08:54:38] 2025-10-13 06:45:25,123 | INFO     | chi2: 1.670186009539788
[2025-10-13 08:54:38] 2025-10-13 06:45:25,124 | INFO     | sum of square deviations: 697054930.0
[2025-10-13 08:54:38] 2025-10-13 06:45:25,124 | INFO     | sum of deviations: -14876635714.000002
[2025-10-13 08:54:38] 2025-10-13 06:45:25,124 | INFO     | mean x: 1760333603.0
[2025-10-13 08:54:38] 2025-10-13 06:45:25,125 | INFO     | mean y: 2392882.6488549616
[2025-10-13 08:54:38] 2025-10-13 06:45:25,125 | INFO     | -- intersect: 37571658402.288895
[2025-10-13 08:54:38] 2025-10-13 06:45:25,125 | INFO     | intersect: 37571658402.288895
[2025-10-13 08:54:38] 2025-10-13 06:45:25,125 | INFO     | chi2: 1.6652149232424251
[2025-10-13 08:54:38] 2025-10-13 06:45:25,125 | INFO     | current chi2=1.6652149232424251 (change=0.29763668651090125 %)
[2025-10-13 08:54:38] 2025-10-13 06:45:25,125 | INFO     | right removable region: 130
[2025-10-13 08:54:38] 2025-10-13 06:45:25,125 | INFO     | sum of square deviations: 697054930.0
[2025-10-13 08:54:38] 2025-10-13 06:45:25,126 | INFO     | sum of deviations: -31740724140.0
[2025-10-13 08:54:38] 2025-10-13 06:45:25,126 | INFO     | mean x: 1760333908.0
[2025-10-13 08:54:38] 2025-10-13 06:45:25,126 | INFO     | mean y: 2419769.3664122135
[2025-10-13 08:54:38] 2025-10-13 06:45:25,126 | INFO     | -- intersect: 80160052350.94235
[2025-10-13 08:54:38] 2025-10-13 06:45:25,126 | INFO     | intersect: 80160052350.94235
[2025-10-13 08:54:38] 2025-10-13 06:45:25,127 | INFO     | chi2: 0.22606702382949653
[2025-10-13 08:54:38] 2025-10-13 06:45:25,127 | INFO     | current chi2=0.22606702382949653 (change=86.46456008263485 %)
[2025-10-13 08:54:38] 2025-10-13 06:45:25,127 | INFO     | sum of square deviations: 620244187.5
[2025-10-13 08:54:38] 2025-10-13 06:45:25,128 | INFO     | sum of deviations: -25799078127.0
[2025-10-13 08:54:38] 2025-10-13 06:45:25,128 | INFO     | mean x: 1760334060.5
[2025-10-13 08:54:38] 2025-10-13 06:45:25,128 | INFO     | mean y: 2407958.1746031744
[2025-10-13 08:54:38] 2025-10-13 06:45:25,128 | INFO     | -- intersect: 73223563225.28244
[2025-10-13 08:54:38] 2025-10-13 06:45:25,128 | INFO     | intersect: 73223563225.28244
[2025-10-13 08:54:38] 2025-10-13 06:45:25,128 | INFO     | chi2: 0.2124994035061932
[2025-10-13 08:54:38] 2025-10-13 06:45:25,128 | INFO     | current chi2=0.2124994035061932 (change=6.001591958646854 %)
[2025-10-13 08:54:38] 2025-10-13 06:45:25,128 | INFO     | left removable region: 20
[2025-10-13 08:54:38] 2025-10-13 06:45:25,129 | INFO     | sum of square deviations: 412686807.5
[2025-10-13 08:54:38] 2025-10-13 06:45:25,129 | INFO     | sum of deviations: -12171032137.000002
[2025-10-13 08:54:38] 2025-10-13 06:45:25,129 | INFO     | mean x: 1760334182.5
[2025-10-13 08:54:38] 2025-10-13 06:45:25,129 | INFO     | mean y: 2380673.418181818
[2025-10-13 08:54:38] 2025-10-13 06:45:25,129 | INFO     | -- intersect: 51918466958.94144
[2025-10-13 08:54:38] 2025-10-13 06:45:25,130 | INFO     | intersect: 51918466958.94144
[2025-10-13 08:54:38] 2025-10-13 06:45:25,130 | INFO     | chi2: 0.13003808316131818
[2025-10-13 08:54:38] 2025-10-13 06:45:25,130 | INFO     | -- intersect: 51918466958.94144
[2025-10-13 08:54:38] 2025-10-13 06:45:25,130 | INFO     | current memory leak: -29.49 B/s (using 110 data points, chi2=0.13)
[2025-10-13 08:54:38] 2025-10-13 06:45:25,130 | INFO     | could have reported an average CPU frequency of 2748 MHz (8 samples)
[2025-10-13 08:54:38] 2025-10-13 06:45:25,130 | INFO     | ..............................
[2025-10-13 08:54:38] 2025-10-13 06:45:25,130 | INFO     | . Timing measurements:
[2025-10-13 08:54:38] 2025-10-13 06:45:25,131 | INFO     | . get job = 0 s
[2025-10-13 08:54:38] 2025-10-13 06:45:25,131 | INFO     | . initial setup = 1 s
[2025-10-13 08:54:38] 2025-10-13 06:45:25,131 | INFO     | . payload setup = 8 s
[2025-10-13 08:54:38] 2025-10-13 06:45:25,131 | INFO     | . stage-in = 0 s
[2025-10-13 08:54:38] 2025-10-13 06:45:25,131 | INFO     | . payload execution = 8280 s
[2025-10-13 08:54:38] 2025-10-13 06:45:25,131 | INFO     | . stage-out = 0 s
[2025-10-13 08:54:38] 2025-10-13 06:45:25,131 | INFO     | . log creation = 0 s
[2025-10-13 08:54:38] 2025-10-13 06:45:25,131 | INFO     | ..............................
[2025-10-13 08:54:38] 2025-10-13 06:45:25,348 | INFO     | 
[2025-10-13 08:54:38] 2025-10-13 06:45:25,348 | INFO     | job summary report
[2025-10-13 08:54:38] 2025-10-13 06:45:25,348 | INFO     | --------------------------------------------------
[2025-10-13 08:54:38] 2025-10-13 06:45:25,348 | INFO     | PanDA job id: 6838200276
[2025-10-13 08:54:38] 2025-10-13 06:45:25,349 | INFO     | task id: 46676269
[2025-10-13 08:54:38] 2025-10-13 06:45:25,349 | INFO     | errors: (none)
[2025-10-13 08:54:38] 2025-10-13 06:45:25,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:54:38] 2025-10-13 06:45:25,349 | INFO     | pilot state: finished 
[2025-10-13 08:54:38] 2025-10-13 06:45:25,349 | INFO     | transexitcode: 0
[2025-10-13 08:54:38] 2025-10-13 06:45:25,349 | INFO     | exeerrorcode: 0
[2025-10-13 08:54:38] 2025-10-13 06:45:25,349 | INFO     | exeerrordiag: 
[2025-10-13 08:54:38] 2025-10-13 06:45:25,349 | INFO     | exitcode: 0
[2025-10-13 08:54:38] 2025-10-13 06:45:25,349 | INFO     | exitmsg: OK
[2025-10-13 08:54:38] 2025-10-13 06:45:25,349 | INFO     | cpuconsumptiontime: 32180 s
[2025-10-13 08:54:38] 2025-10-13 06:45:25,350 | INFO     | nevents: 400
[2025-10-13 08:54:38] 2025-10-13 06:45:25,350 | INFO     | neventsw: 0
[2025-10-13 08:54:38] 2025-10-13 06:45:25,350 | INFO     | pid: 3675160
[2025-10-13 08:54:38] 2025-10-13 06:45:25,350 | INFO     | pgrp: 3675160
[2025-10-13 08:54:38] 2025-10-13 06:45:25,350 | INFO     | corecount: 4
[2025-10-13 08:54:38] 2025-10-13 06:45:25,350 | INFO     | event service: False
[2025-10-13 08:54:38] 2025-10-13 06:45:25,350 | INFO     | sizes: {0: 2348647, 1: 2348846, 7: 2349108, 12: 2349136, 8292: 2377416, 8294: 2386622, 8302: 2386760}
[2025-10-13 08:54:38] 2025-10-13 06:45:25,350 | INFO     | --------------------------------------------------
[2025-10-13 08:54:38] 2025-10-13 06:45:25,350 | INFO     | 
[2025-10-13 08:54:38] 2025-10-13 06:45:25,350 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-10-13 08:54:38] 2025-10-13 06:45:25,382 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,383 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,383 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,383 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,384 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:54:38] 2025-10-13 06:45:25,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,384 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:54:38] 2025-10-13 06:45:25,384 | INFO     | job 6838200276 has completed (purged errors)
[2025-10-13 08:54:38] 2025-10-13 06:45:25,385 | INFO     | overall cleanup function is called
[2025-10-13 08:54:38] 2025-10-13 06:45:26,393 | INFO     | --- collectZombieJob: --- 10, [3675160]
[2025-10-13 08:54:38] 2025-10-13 06:45:26,393 | INFO     | zombie collector waiting for pid 3675160
[2025-10-13 08:54:38] 2025-10-13 06:45:26,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:54:38] 2025-10-13 06:45:26,393 | INFO     | collected zombie processes
[2025-10-13 08:54:38] 2025-10-13 06:45:26,393 | INFO     | will attempt to kill all subprocesses of pid=3675160
[2025-10-13 08:54:38] 2025-10-13 06:45:27,156 | INFO     | process IDs to be killed: [3675160] (in reverse order)
[2025-10-13 08:54:38] 2025-10-13 06:45:27,407 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:54:38] 2025-10-13 06:45:27,407 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:54:38] 2025-10-13 06:45:27,438 | INFO     | did not find any defunct processes belonging to 3675160
[2025-10-13 08:54:38] 2025-10-13 06:45:27,464 | INFO     | did not find any defunct processes belonging to 3675160
[2025-10-13 08:54:38] 2025-10-13 06:45:27,465 | INFO     | ready for new job
[2025-10-13 08:54:38] 2025-10-13 06:45:27,465 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:54:38] 2025-10-13 06:45:27,467 | INFO     | ***************************************
[2025-10-13 08:54:38] 2025-10-13 06:45:27,467 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:54:38] 2025-10-13 06:45:27,467 | INFO     | ***************************************
[2025-10-13 08:54:38] 2025-10-13 06:45:27,467 | INFO     | 
[2025-10-13 08:54:38] 2025-10-13 06:45:27,476 | INFO     | architecture information:
[2025-10-13 08:54:38] 2025-10-13 06:45:27,476 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:54:38] 2025-10-13 06:45:27,496 | INFO     | cat /etc/os-release:
[2025-10-13 08:54:38] NAME="CentOS Linux"
[2025-10-13 08:54:38] VERSION="7 (Core)"
[2025-10-13 08:54:38] ID="centos"
[2025-10-13 08:54:38] ID_LIKE="rhel fedora"
[2025-10-13 08:54:38] VERSION_ID="7"
[2025-10-13 08:54:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:54:38] ANSI_COLOR="0;31"
[2025-10-13 08:54:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:54:38] HOME_URL="https://www.centos.org/"
[2025-10-13 08:54:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:54:38] 
[2025-10-13 08:54:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:54:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:54:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:54:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:54:38] 
[2025-10-13 08:54:38] 2025-10-13 06:45:27,496 | INFO     | ***************************************
[2025-10-13 08:54:38] 2025-10-13 06:45:27,999 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-10-13 08:54:38] 2025-10-13 06:45:28,027 | INFO     | sufficient remaining disk space (3338980556800 B)
[2025-10-13 08:54:38] 2025-10-13 06:45:28,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:54:38] 2025-10-13 06:45:28,027 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:54:38] 2025-10-13 06:45:28,027 | INFO     | update_server=False
[2025-10-13 08:54:38] 2025-10-13 06:45:28,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:54:38] 2025-10-13 06:45:28,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:54:38] 2025-10-13 06:45:28,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:54:38] 2025-10-13 06:45:28,268 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 08:54:38] 2025-10-13 06:45:28,268 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 08:54:38] 2025-10-13 06:45:28,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:54:38] 2025-10-13 06:45:28,269 | INFO     | will abort loop
[2025-10-13 08:54:38] 2025-10-13 06:45:28,371 | INFO     | all payload control threads have been joined
[2025-10-13 08:54:38] 2025-10-13 06:45:28,515 | INFO     | all job control threads have been joined
[2025-10-13 08:54:38] 2025-10-13 06:45:28,871 | INFO     | all data control threads have been joined
[2025-10-13 08:54:38] 2025-10-13 06:45:29,029 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:29,080 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:29,219 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:29,274 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:29,377 | INFO     | [payload] control thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:29,520 | INFO     | [job] control thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:29,557 | INFO     | [job] validate thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:29,615 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:29,679 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:29,762 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:29,873 | INFO     | [data] control thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:29,878 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:30,034 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:30,238 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:54:38] 2025-10-13 06:45:31,243 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:32,034 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:39,024 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:54:38] 2025-10-13 06:45:40,030 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:54:38] 2025-10-13 06:45:56,286 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:54:38] 2025-10-13 06:45:57,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22792894920512)>', '<ExcThread(monitor, started 22792170870528)>']
[2025-10-13 08:54:38] 2025-10-13 06:45:58,753 | INFO     | PID=3655715 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:54:38] 2025-10-13 06:45:58,754 | INFO     | .. there are 9 such processes running
[2025-10-13 08:54:38] 2025-10-13 06:45:58,754 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:54:38] 2025-10-13 06:45:58,754 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:54:38] 2025-10-13 06:45:58,754 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:54:38] 2025-10-13 06:45:58,754 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:54:38] 2025-10-13 06:45:58,754 | INFO     | [monitor] control thread has ended
[2025-10-13 08:54:38] 2025-10-13 06:46:02,258 | INFO     | all workflow threads have been joined
[2025-10-13 08:54:38] 2025-10-13 06:46:02,258 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:54:38] 2025-10-13 06:46:02,259 | INFO     | traces error code: 0
[2025-10-13 08:54:38] 2025-10-13 06:46:02,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:54:38] 2025-10-13 06:46:02,398 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:54:38] 2025-10-13 06:46:02,402 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:54:38] 2025-10-13 06:46:02,406 [wrapper] pilotpid: 3655715
[2025-10-13 08:54:38] 2025-10-13 06:46:02,410 [wrapper] Pilot exit status: 0
[2025-10-13 08:54:38] 2025-10-13 06:46:02,425 [wrapper] pandaids: 6838200276
[2025-10-13 08:54:38] 2025-10-13 06:46:02,549 [wrapper] cleanup supervisor_pilot 4013420 3655716
[2025-10-13 08:54:38] 2025-10-13 06:46:02,551 [wrapper] Test setup, not cleaning
[2025-10-13 08:54:38] 2025-10-13 06:46:02,554 [wrapper] apfmon messages muted
[2025-10-13 08:54:38] 2025-10-13 06:46:02,556 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:54:38] 2025-10-13 06:46:02,558 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:54:38]  *** Error codes and diagnostics ***
[2025-10-13 08:54:38]     "exeErrorCode": 0,
[2025-10-13 08:54:38]     "exeErrorDiag": "",
[2025-10-13 08:54:38]     "pilotErrorCode": 0,
[2025-10-13 08:54:38]     "pilotErrorDiag": "",
[2025-10-13 08:54:38]  *** Listing of results directory ***
[2025-10-13 08:54:38] total 407720
[2025-10-13 08:54:38] -rw-r--r-- 1 boinc boinc    557409 Oct 11 09:53 pilot3.tar.gz
[2025-10-13 08:54:38] -rwx------ 1 boinc boinc     36292 Oct 11 09:57 runpilot2-wrapper.sh
[2025-10-13 08:54:38] -rw-r--r-- 1 boinc boinc      5112 Oct 11 09:57 queuedata.json
[2025-10-13 08:54:38] -rw-r--r-- 1 boinc boinc       100 Oct 13 06:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:54:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 06:26 run_atlas
[2025-10-13 08:54:38] -rw-r--r-- 1 boinc boinc       105 Oct 13 06:26 job.xml
[2025-10-13 08:54:38] -rw-r--r-- 2 boinc boinc 220664835 Oct 13 06:26 EVNT.46676267._002165.pool.root.1
[2025-10-13 08:54:38] -rw-r--r-- 1 boinc boinc      6688 Oct 13 06:26 init_data.xml
[2025-10-13 08:54:38] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:26 start_atlas.sh
[2025-10-13 08:54:38] drwxrwx--x 2 boinc boinc      4096 Oct 13 06:26 shared
[2025-10-13 08:54:38] -rw-r--r-- 2 boinc boinc    569678 Oct 13 06:26 input.tar.gz
[2025-10-13 08:54:38] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:26 boinc_lockfile
[2025-10-13 08:54:38] -rw-r--r-- 1 boinc boinc      2549 Oct 13 06:26 pandaJob.out
[2025-10-13 08:54:38] -rw------- 1 boinc boinc    974365 Oct 13 06:26 agis_schedconf.cvmfs.json
[2025-10-13 08:54:38] -rw------- 1 boinc boinc   1560580 Oct 13 06:26 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:54:38] drwx------ 5 boinc boinc      4096 Oct 13 06:26 pilot3
[2025-10-13 08:54:38] -rw------- 1 boinc boinc 189966740 Oct 13 08:44 HITS.46676269._053942.pool.root.1
[2025-10-13 08:54:38] -rw------- 1 boinc boinc        95 Oct 13 08:45 pilot_heartbeat.json
[2025-10-13 08:54:38] -rw------- 1 boinc boinc      1022 Oct 13 08:45 memory_monitor_summary.json
[2025-10-13 08:54:38] -rw-r--r-- 1 boinc boinc       528 Oct 13 08:45 boinc_task_state.xml
[2025-10-13 08:54:38] -rw------- 1 boinc boinc    309925 Oct 13 08:45 log.46676269._053942.job.log.tgz.1
[2025-10-13 08:54:38] -rw------- 1 boinc boinc      7794 Oct 13 08:45 heartbeat.json
[2025-10-13 08:54:38] -rw------- 1 boinc boinc      5093 Oct 13 08:46 pilotlog.txt
[2025-10-13 08:54:38] -rw------- 1 boinc boinc   1174763 Oct 13 08:46 log.46676269._053942.job.log.1
[2025-10-13 08:54:38] -rw------- 1 boinc boinc       357 Oct 13 08:46 output.list
[2025-10-13 08:54:38] -rw-r--r-- 1 boinc boinc       620 Oct 13 08:46 runtime_log
[2025-10-13 08:54:38] -rw------- 1 boinc boinc   1505280 Oct 13 08:46 result.tar.gz
[2025-10-13 08:54:38] -rw-r--r-- 1 boinc boinc      9084 Oct 13 08:46 runtime_log.err
[2025-10-13 08:54:38] -rw------- 1 boinc boinc       662 Oct 13 08:46 FX6KDmDfjR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmeVRMDmHsZq1m.diag
[2025-10-13 08:54:38] -rw-r--r-- 1 boinc boinc        25 Oct 13 08:54 wrapper_checkpoint.txt
[2025-10-13 08:54:38] -rw-r--r-- 1 boinc boinc      8192 Oct 13 08:54 boinc_mmap_file
[2025-10-13 08:54:38] -rw-r--r-- 1 boinc boinc     20846 Oct 13 08:54 stderr.txt
[2025-10-13 08:54:38] HITS file was successfully produced:
[2025-10-13 08:54:38] -rw------- 1 boinc boinc 189966740 Oct 13 08:44 shared/HITS.pool.root.1
[2025-10-13 08:54:38]  *** Contents of shared directory: ***
[2025-10-13 08:54:38] total 403068
[2025-10-13 08:54:38] -rw-r--r-- 2 boinc boinc 220664835 Oct 13 06:26 ATLAS.root_0
[2025-10-13 08:54:38] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:26 start_atlas.sh
[2025-10-13 08:54:38] -rw-r--r-- 2 boinc boinc    569678 Oct 13 06:26 input.tar.gz
[2025-10-13 08:54:38] -rw------- 1 boinc boinc 189966740 Oct 13 08:44 HITS.pool.root.1
[2025-10-13 08:54:38] -rw------- 1 boinc boinc   1505280 Oct 13 08:46 result.tar.gz
08:54:39 (3649407): run_atlas exited; CPU time 32705.501654
08:54:39 (3649407): called boinc_finish(0)

</stderr_txt>
]]>

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