Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:10:54 (2725375): wrapper (7.7.26015): starting
14:10:54 (2725375): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 14:10:54] Arguments: --nthreads 8
[2025-10-11 14:10:54] Threads: 8
[2025-10-11 14:10:54] Checking for CVMFS
[2025-10-11 14:10:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:10:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:10:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:10:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:10:56] 2.13.2.0 552491 35910 145300 151592 2 253 23359092 40960001 67984 16776704 0 376853959 99.797 196456620 32747 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 14:10:56] CVMFS is ok
[2025-10-11 14:10:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:10:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:10:56] Further information can be found at the LHC@home message board.
[2025-10-11 14:10:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:10:56] Checking for apptainer binary...
[2025-10-11 14:10:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:10:56] Running /usr/bin/apptainer --version
[2025-10-11 14:10:56] apptainer version 1.4.3-1.el9
[2025-10-11 14:10:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:10:57] c8-7-5.aglt2.org
[2025-10-11 14:10:57] apptainer works
[2025-10-11 14:10:57] Set ATHENA_PROC_NUMBER=8
[2025-10-11 14:10:57] Set ATHENA_CORE_NUMBER=8
[2025-10-11 14:10:57] Starting ATLAS job with PandaID=6838363632
[2025-10-11 14:10:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:43:26]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:43:26] 2025-10-11 19:42:27,031 | WARNING  | process 2748154 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 15:43:26] 2025-10-11 19:42:27,032 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838363632/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:43:26] 2025-10-11 19:42:27,427 | INFO     | time since job start (5423s) is within the limit (172800.0s)
[2025-10-11 15:43:26] 2025-10-11 19:42:27,834 | INFO     | number of running child processes to parent process 2748154: 1
[2025-10-11 15:43:26] 2025-10-11 19:42:27,835 | INFO     | maximum number of monitored processes: 6
[2025-10-11 15:43:26] 2025-10-11 19:42:29,448 | INFO     | time since job start (5425s) is within the limit (172800.0s)
[2025-10-11 15:43:26] 2025-10-11 19:42:30,347 | INFO     | monitor loop #345: job 0:6838363632 is in state 'finished'
[2025-10-11 15:43:26] 2025-10-11 19:42:30,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:43:26] 2025-10-11 19:42:31,466 | INFO     | time since job start (5427s) is within the limit (172800.0s)
[2025-10-11 15:43:26] 2025-10-11 19:42:32,871 | INFO     | monitor loop #346: job 0:6838363632 is in state 'finished'
[2025-10-11 15:43:26] 2025-10-11 19:42:32,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:43:26] 2025-10-11 19:42:33,473 | INFO     | time since job start (5429s) is within the limit (172800.0s)
[2025-10-11 15:43:26] 2025-10-11 19:42:35,383 | INFO     | monitor loop #347: job 0:6838363632 is in state 'finished'
[2025-10-11 15:43:26] 2025-10-11 19:42:35,383 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:43:26] 2025-10-11 19:42:35,485 | INFO     | time since job start (5431s) is within the limit (172800.0s)
[2025-10-11 15:43:26] 2025-10-11 19:42:37,496 | INFO     | time since job start (5433s) is within the limit (172800.0s)
[2025-10-11 15:43:26] 2025-10-11 19:42:37,888 | INFO     | monitor loop #348: job 0:6838363632 is in state 'finished'
[2025-10-11 15:43:26] 2025-10-11 19:42:37,888 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:43:26] 2025-10-11 19:42:39,503 | INFO     | time since job start (5435s) is within the limit (172800.0s)
[2025-10-11 15:43:26] 2025-10-11 19:42:40,394 | INFO     | monitor loop #349: job 0:6838363632 is in state 'finished'
[2025-10-11 15:43:26] 2025-10-11 19:42:40,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:43:26] 2025-10-11 19:42:41,520 | INFO     | time since job start (5437s) is within the limit (172800.0s)
[2025-10-11 15:43:26] 2025-10-11 19:42:42,899 | INFO     | monitor loop #350: job 0:6838363632 is in state 'finished'
[2025-10-11 15:43:26] 2025-10-11 19:42:42,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:43:26] 2025-10-11 19:42:43,526 | INFO     | time since job start (5439s) is within the limit (172800.0s)
[2025-10-11 15:43:26] 2025-10-11 19:42:45,407 | INFO     | monitor loop #351: job 0:6838363632 is in state 'finished'
[2025-10-11 15:43:26] 2025-10-11 19:42:45,407 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:43:26] 2025-10-11 19:42:45,534 | INFO     | time since job start (5441s) is within the limit (172800.0s)
[2025-10-11 15:43:26] 2025-10-11 19:42:47,920 | INFO     | monitor loop #352: job 0:6838363632 is in state 'finished'
[2025-10-11 15:43:26] 2025-10-11 19:42:47,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:43:26] 2025-10-11 19:42:48,107 | INFO     | PID=2730861 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:43:26] 2025-10-11 19:42:48,107 | INFO     | .. there are 86 such processes running
[2025-10-11 15:43:26] 2025-10-11 19:42:49,110 | INFO     | time since job start (5445s) is within the limit (172800.0s)
[2025-10-11 15:43:26] 2025-10-11 19:42:50,428 | INFO     | monitor loop #353: job 0:6838363632 is in state 'finished'
[2025-10-11 15:43:26] 2025-10-11 19:42:50,428 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:43:26] 2025-10-11 19:42:51,119 | INFO     | time since job start (5447s) is within the limit (172800.0s)
[2025-10-11 15:43:26] 2025-10-11 19:42:51,946 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 15:43:26] 2025-10-11 19:42:51,978 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.992320312508
[2025-10-11 15:43:26] 2025-10-11 19:42:52,038 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838363632/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:43:26] 2025-10-11 19:42:52,038 | INFO     | extracted standard info from prmon json
[2025-10-11 15:43:26] 2025-10-11 19:42:52,039 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 15:43:26] 2025-10-11 19:42:52,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 15:43:26] 2025-10-11 19:42:52,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:43:26] 2025-10-11 19:42:52,043 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:43:26] 2025-10-11 19:42:52,044 | INFO     | fitting pss+swap vs Time
[2025-10-11 15:43:26] 2025-10-11 19:42:52,045 | INFO     | sum of square deviations: 158726761.80000016
[2025-10-11 15:43:26] 2025-10-11 19:42:52,045 | INFO     | sum of deviations: -7296932859.4
[2025-10-11 15:43:26] 2025-10-11 19:42:52,045 | INFO     | mean x: 1760209182.55
[2025-10-11 15:43:26] 2025-10-11 19:42:52,045 | INFO     | mean y: 2416694.6
[2025-10-11 15:43:26] 2025-10-11 19:42:52,045 | INFO     | -- intersect: 80922156238.90346
[2025-10-11 15:43:26] 2025-10-11 19:42:52,045 | INFO     | intersect: 80922156238.90346
[2025-10-11 15:43:26] 2025-10-11 19:42:52,045 | INFO     | chi2: 0.23508037006624904
[2025-10-11 15:43:26] 2025-10-11 19:42:52,045 | INFO     | -- intersect: 80922156238.90346
[2025-10-11 15:43:26] 2025-10-11 19:42:52,045 | INFO     | current memory leak: -45.97 B/s (using 80 data points, chi2=0.24)
[2025-10-11 15:43:26] 2025-10-11 19:42:52,045 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-10-11 15:43:26] 2025-10-11 19:42:52,046 | INFO     | ..............................
[2025-10-11 15:43:26] 2025-10-11 19:42:52,046 | INFO     | . Timing measurements:
[2025-10-11 15:43:26] 2025-10-11 19:42:52,046 | INFO     | . get job = 0 s
[2025-10-11 15:43:26] 2025-10-11 19:42:52,046 | INFO     | . initial setup = 4 s
[2025-10-11 15:43:26] 2025-10-11 19:42:52,046 | INFO     | . payload setup = 49 s
[2025-10-11 15:43:26] 2025-10-11 19:42:52,046 | INFO     | . stage-in = 0 s
[2025-10-11 15:43:26] 2025-10-11 19:42:52,046 | INFO     | . payload execution = 5300 s
[2025-10-11 15:43:26] 2025-10-11 19:42:52,046 | INFO     | . stage-out = 1 s
[2025-10-11 15:43:26] 2025-10-11 19:42:52,046 | INFO     | . log creation = 0 s
[2025-10-11 15:43:26] 2025-10-11 19:42:52,046 | INFO     | ..............................
[2025-10-11 15:43:26] 2025-10-11 19:42:52,159 | INFO     | 
[2025-10-11 15:43:26] 2025-10-11 19:42:52,159 | INFO     | job summary report
[2025-10-11 15:43:26] 2025-10-11 19:42:52,159 | INFO     | --------------------------------------------------
[2025-10-11 15:43:26] 2025-10-11 19:42:52,159 | INFO     | PanDA job id: 6838363632
[2025-10-11 15:43:26] 2025-10-11 19:42:52,159 | INFO     | task id: 46676269
[2025-10-11 15:43:26] 2025-10-11 19:42:52,159 | INFO     | errors: (none)
[2025-10-11 15:43:26] 2025-10-11 19:42:52,159 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:43:26] 2025-10-11 19:42:52,159 | INFO     | pilot state: finished 
[2025-10-11 15:43:26] 2025-10-11 19:42:52,159 | INFO     | transexitcode: 0
[2025-10-11 15:43:26] 2025-10-11 19:42:52,159 | INFO     | exeerrorcode: 0
[2025-10-11 15:43:26] 2025-10-11 19:42:52,159 | INFO     | exeerrordiag: 
[2025-10-11 15:43:26] 2025-10-11 19:42:52,159 | INFO     | exitcode: 0
[2025-10-11 15:43:26] 2025-10-11 19:42:52,159 | INFO     | exitmsg: OK
[2025-10-11 15:43:26] 2025-10-11 19:42:52,160 | INFO     | cpuconsumptiontime: 22254 s
[2025-10-11 15:43:26] 2025-10-11 19:42:52,160 | INFO     | nevents: 400
[2025-10-11 15:43:26] 2025-10-11 19:42:52,160 | INFO     | neventsw: 0
[2025-10-11 15:43:26] 2025-10-11 19:42:52,160 | INFO     | pid: 2748154
[2025-10-11 15:43:26] 2025-10-11 19:42:52,160 | INFO     | pgrp: 2748154
[2025-10-11 15:43:26] 2025-10-11 19:42:52,160 | INFO     | corecount: 8
[2025-10-11 15:43:26] 2025-10-11 19:42:52,160 | INFO     | event service: False
[2025-10-11 15:43:26] 2025-10-11 19:42:52,160 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 12: 2348913, 23: 2348941, 28: 2349231, 34: 2349387, 5350: 2375773, 5351: 2375772, 5354: 2384826, 5356: 2384882, 5385: 2
[2025-10-11 15:43:26] 2025-10-11 19:42:52,160 | INFO     | --------------------------------------------------
[2025-10-11 15:43:26] 2025-10-11 19:42:52,160 | INFO     | 
[2025-10-11 15:43:26] 2025-10-11 19:42:52,162 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 15:43:26] 2025-10-11 19:42:52,284 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,284 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,284 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,284 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | job 6838363632 has completed (purged errors)
[2025-10-11 15:43:26] 2025-10-11 19:42:52,285 | INFO     | overall cleanup function is called
[2025-10-11 15:43:26] 2025-10-11 19:42:53,292 | INFO     | --- collectZombieJob: --- 10, [2748154]
[2025-10-11 15:43:26] 2025-10-11 19:42:53,292 | INFO     | zombie collector waiting for pid 2748154
[2025-10-11 15:43:26] 2025-10-11 19:42:53,293 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:43:26] 2025-10-11 19:42:53,293 | INFO     | collected zombie processes
[2025-10-11 15:43:26] 2025-10-11 19:42:53,293 | INFO     | will attempt to kill all subprocesses of pid=2748154
[2025-10-11 15:43:26] 2025-10-11 19:42:54,623 | INFO     | process IDs to be killed: [2748154] (in reverse order)
[2025-10-11 15:43:26] 2025-10-11 19:42:54,968 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:43:26] 2025-10-11 19:42:54,968 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:43:26] 2025-10-11 19:42:55,083 | INFO     | did not find any defunct processes belonging to 2748154
[2025-10-11 15:43:26] 2025-10-11 19:42:55,217 | INFO     | did not find any defunct processes belonging to 2748154
[2025-10-11 15:43:26] 2025-10-11 19:42:55,217 | INFO     | ready for new job
[2025-10-11 15:43:26] 2025-10-11 19:42:55,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:43:26] 2025-10-11 19:42:55,219 | INFO     | ***************************************
[2025-10-11 15:43:26] 2025-10-11 19:42:55,219 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:43:26] 2025-10-11 19:42:55,219 | INFO     | ***************************************
[2025-10-11 15:43:26] 2025-10-11 19:42:55,219 | INFO     | 
[2025-10-11 15:43:26] 2025-10-11 19:42:55,224 | INFO     | architecture information:
[2025-10-11 15:43:26] 2025-10-11 19:42:55,224 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:43:26] 2025-10-11 19:42:55,275 | INFO     | cat /etc/os-release:
[2025-10-11 15:43:26] NAME="CentOS Linux"
[2025-10-11 15:43:26] VERSION="7 (Core)"
[2025-10-11 15:43:26] ID="centos"
[2025-10-11 15:43:26] ID_LIKE="rhel fedora"
[2025-10-11 15:43:26] VERSION_ID="7"
[2025-10-11 15:43:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:43:26] ANSI_COLOR="0;31"
[2025-10-11 15:43:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:43:26] HOME_URL="https://www.centos.org/"
[2025-10-11 15:43:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:43:26] 
[2025-10-11 15:43:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:43:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:43:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:43:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:43:26] 
[2025-10-11 15:43:26] 2025-10-11 19:42:55,275 | INFO     | ***************************************
[2025-10-11 15:43:26] 2025-10-11 19:42:55,778 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 15:43:26] 2025-10-11 19:42:55,845 | INFO     | sufficient remaining disk space (169493921792 B)
[2025-10-11 15:43:26] 2025-10-11 19:42:55,845 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:43:26] 2025-10-11 19:42:55,846 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:43:26] 2025-10-11 19:42:55,846 | INFO     | update_server=False
[2025-10-11 15:43:26] 2025-10-11 19:42:55,846 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:43:26] 2025-10-11 19:42:56,085 | INFO     | all payload control threads have been joined
[2025-10-11 15:43:26] 2025-10-11 19:42:56,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:43:26] 2025-10-11 19:42:56,479 | INFO     | aborting loop
[2025-10-11 15:43:26] 2025-10-11 19:42:56,496 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:43:26] 2025-10-11 19:42:56,497 | INFO     | all job control threads have been joined
[2025-10-11 15:43:26] 2025-10-11 19:42:56,580 | INFO     | all data control threads have been joined
[2025-10-11 15:43:26] 2025-10-11 19:42:56,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:43:26] 2025-10-11 19:42:56,851 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:42:56,938 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:42:56,951 | INFO     | [job] validate thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:42:57,091 | INFO     | [payload] control thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:42:57,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:43:26] 2025-10-11 19:42:57,315 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:42:57,383 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:42:57,485 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:42:57,503 | INFO     | [job] control thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:42:57,586 | INFO     | [data] control thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:42:57,977 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:42:57,977 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:42:58,070 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:42:58,079 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:42:58,187 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:42:58,739 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:43:00,505 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:43:26] 2025-10-11 19:43:12,732 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:43:26] 2025-10-11 19:43:14,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538347358016)>', '<ExcThread(monitor, started 140537629763328)>']
[2025-10-11 15:43:26] 2025-10-11 19:43:19,198 | INFO     | all workflow threads have been joined
[2025-10-11 15:43:26] 2025-10-11 19:43:19,198 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:43:26] 2025-10-11 19:43:19,198 | INFO     | traces error code: 0
[2025-10-11 15:43:26] 2025-10-11 19:43:19,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:43:26] 2025-10-11 19:43:25,192 | INFO     | PID=2730861 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:43:26] 2025-10-11 19:43:25,192 | INFO     | .. there are 86 such processes running
[2025-10-11 15:43:26] 2025-10-11 19:43:25,193 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:43:26] 2025-10-11 19:43:25,193 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:43:26] 2025-10-11 19:43:25,193 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:43:26] 2025-10-11 19:43:25,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:43:26] 2025-10-11 19:43:25,193 | INFO     | [monitor] control thread has ended
[2025-10-11 15:43:26] 2025-10-11 19:43:25,369 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:43:26] 2025-10-11 19:43:25,439 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:43:26] 2025-10-11 19:43:25,479 [wrapper] pilotpid: 2730861
[2025-10-11 15:43:26] 2025-10-11 19:43:25,503 [wrapper] Pilot exit status: 0
[2025-10-11 15:43:26] 2025-10-11 19:43:25,637 [wrapper] pandaids: 6838363632
[2025-10-11 15:43:26] 2025-10-11 19:43:25,961 [wrapper] cleanup supervisor_pilot 3604447 2730862
[2025-10-11 15:43:26] 2025-10-11 19:43:26,007 [wrapper] Test setup, not cleaning
[2025-10-11 15:43:26] 2025-10-11 19:43:26,061 [wrapper] apfmon messages muted
[2025-10-11 15:43:26] 2025-10-11 19:43:26,098 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:43:26] 2025-10-11 19:43:26,129 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:43:26]  *** Error codes and diagnostics ***
[2025-10-11 15:43:26]     "exeErrorCode": 0,
[2025-10-11 15:43:26]     "exeErrorDiag": "",
[2025-10-11 15:43:26]     "pilotErrorCode": 0,
[2025-10-11 15:43:26]     "pilotErrorDiag": "",
[2025-10-11 15:43:26]  *** Listing of results directory ***
[2025-10-11 15:43:26] total 402436
[2025-10-11 15:43:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 06:16 pilot3.tar.gz
[2025-10-11 15:43:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 06:23 queuedata.json
[2025-10-11 15:43:26] -rwx------. 1 boincer umatlas     36292 Oct 11 06:24 runpilot2-wrapper.sh
[2025-10-11 15:43:26] -rw-r--r--. 1 boincer umatlas       100 Oct 11 14:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:43:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 14:10 run_atlas
[2025-10-11 15:43:26] -rw-r--r--. 1 boincer umatlas       105 Oct 11 14:10 job.xml
[2025-10-11 15:43:26] -rw-r--r--. 2 boincer umatlas 220460643 Oct 11 14:10 EVNT.46676267._002257.pool.root.1
[2025-10-11 15:43:26] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 14:10 shared
[2025-10-11 15:43:26] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 14:10 input.tar.gz
[2025-10-11 15:43:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 14:10 start_atlas.sh
[2025-10-11 15:43:26] -rw-r--r--. 1 boincer umatlas         0 Oct 11 14:10 boinc_lockfile
[2025-10-11 15:43:26] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 14:10 pandaJob.out
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas    975520 Oct 11 14:12 agis_schedconf.cvmfs.json
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas   1560580 Oct 11 14:12 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:43:26] drwx------. 5 boincer umatlas      4096 Oct 11 14:12 pilot3
[2025-10-11 15:43:26] -rw-r--r--. 1 boincer umatlas      7162 Oct 11 15:38 init_data.xml
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas 185624963 Oct 11 15:41 HITS.46676269._056128.pool.root.1
[2025-10-11 15:43:26] -rw-r--r--. 1 boincer umatlas       530 Oct 11 15:41 boinc_task_state.xml
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas      1048 Oct 11 15:42 memory_monitor_summary.json
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas    342332 Oct 11 15:42 log.46676269._056128.job.log.tgz.1
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas      7818 Oct 11 15:42 heartbeat.json
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas        95 Oct 11 15:43 pilot_heartbeat.json
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas       823 Oct 11 15:43 pilotlog.txt
[2025-10-11 15:43:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 15:43 boinc_mmap_file
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas    709470 Oct 11 15:43 log.46676269._056128.job.log.1
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas       357 Oct 11 15:43 output.list
[2025-10-11 15:43:26] -rw-r--r--. 1 boincer umatlas        27 Oct 11 15:43 wrapper_checkpoint.txt
[2025-10-11 15:43:26] -rw-r--r--. 1 boincer umatlas       620 Oct 11 15:43 runtime_log
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas   1075200 Oct 11 15:43 result.tar.gz
[2025-10-11 15:43:26] -rw-r--r--. 1 boincer umatlas      8693 Oct 11 15:43 runtime_log.err
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas       655 Oct 11 15:43 iJRODmFxlR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwCgNDmg8e0Um.diag
[2025-10-11 15:43:26] -rw-r--r--. 1 boincer umatlas     22370 Oct 11 15:43 stderr.txt
[2025-10-11 15:43:26] HITS file was successfully produced:
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas 185624963 Oct 11 15:41 shared/HITS.pool.root.1
[2025-10-11 15:43:26]  *** Contents of shared directory: ***
[2025-10-11 15:43:26] total 398204
[2025-10-11 15:43:26] -rw-r--r--. 2 boincer umatlas 220460643 Oct 11 14:10 ATLAS.root_0
[2025-10-11 15:43:26] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 14:10 input.tar.gz
[2025-10-11 15:43:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 14:10 start_atlas.sh
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas 185624963 Oct 11 15:41 HITS.pool.root.1
[2025-10-11 15:43:26] -rw-------. 1 boincer umatlas   1075200 Oct 11 15:43 result.tar.gz
15:43:28 (2725375): run_atlas exited; CPU time 22449.214939
15:43:28 (2725375): called boinc_finish(0)

</stderr_txt>
]]>

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