Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:59:17 (4048064): wrapper (7.7.26015): starting
13:59:17 (4048064): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 13:59:17] Arguments: --nthreads 12
[2025-10-11 13:59:17] Threads: 12
[2025-10-11 13:59:17] Checking for CVMFS
[2025-10-11 13:59:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:59:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:59:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:59:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:59:17] 2.13.2.0 3683012 11678 147336 151591 0 249 36174383 40960001 6837 16776704 0 125851313 99.839 55032233 32593 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 13:59:17] CVMFS is ok
[2025-10-11 13:59:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:59:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:59:17] Further information can be found at the LHC@home message board.
[2025-10-11 13:59:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:59:17] Checking for apptainer binary...
[2025-10-11 13:59:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:59:17] Running /usr/bin/apptainer --version
[2025-10-11 13:59:17] apptainer version 1.4.3-1.el9
[2025-10-11 13:59:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:59:17] c8-7-4.aglt2.org
[2025-10-11 13:59:17] apptainer works
[2025-10-11 13:59:18] Set ATHENA_PROC_NUMBER=12
[2025-10-11 13:59:18] Set ATHENA_CORE_NUMBER=12
[2025-10-11 13:59:18] Starting ATLAS job with PandaID=6838363390
[2025-10-11 13:59:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 14:32:47]  *** The last 200 lines of the pilot log: ***
[2025-10-11 14:32:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 14:32:47]  replicas=None
[2025-10-11 14:32:47]  scope=mc23_13p6TeV
[2025-10-11 14:32:47]  status=None
[2025-10-11 14:32:47]  status_code=0
[2025-10-11 14:32:47]  storage_token=
[2025-10-11 14:32:47]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6838363390/log.46676269._055933.job.log.tgz.1
[2025-10-11 14:32:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/ef/log.46676269._055933.job.log.tgz.1
[2025-10-11 14:32:47]  workdir=None
[2025-10-11 14:32:47] ]
[2025-10-11 14:32:47] 2025-10-11 18:32:09,452 | INFO     | transferring file log.46676269._055933.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6838363390/log.46676269._055933.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 14:32:47] 2025-10-11 18:32:09,452 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6838363390/log.46676269._055933.job.log.tgz.1 /tmp/boinchome/slots/4/log.46676269._055933.job
[2025-10-11 14:32:47] 2025-10-11 18:32:09,465 | INFO     | adding to output.list: log.46676269._055933.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/ef/log.46676269._055933.job.log.tg
[2025-10-11 14:32:47] 2025-10-11 18:32:09,465 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 14:32:47] 2025-10-11 18:32:09,465 | INFO     | summary of transferred files:
[2025-10-11 14:32:47] 2025-10-11 18:32:09,465 | INFO     |  -- lfn=log.46676269._055933.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 14:32:47] 2025-10-11 18:32:09,465 | INFO     | stage-out finished correctly
[2025-10-11 14:32:47] 2025-10-11 18:32:10,048 | INFO     | time since job start (1965s) is within the limit (172800.0s)
[2025-10-11 14:32:47] 2025-10-11 18:32:11,326 | INFO     | monitor loop #149: job 0:6838363390 is in state 'finished'
[2025-10-11 14:32:47] 2025-10-11 18:32:11,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:32:47] 2025-10-11 18:32:11,383 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 14:32:47] 2025-10-11 18:32:11,412 | INFO     | job 6838363390 has state=finished
[2025-10-11 14:32:47] 2025-10-11 18:32:11,412 | INFO     | preparing for final server update for job 6838363390 in state='finished'
[2025-10-11 14:32:47] 2025-10-11 18:32:11,412 | INFO     | this job has now completed (state=finished)
[2025-10-11 14:32:47] 2025-10-11 18:32:11,413 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 14:32:47] 2025-10-11 18:32:11,413 | INFO     | log transfer has been attempted: DONE
[2025-10-11 14:32:47] 2025-10-11 18:32:11,413 | INFO     | job 6838363390 has finished - writing final server update
[2025-10-11 14:32:47] 2025-10-11 18:32:11,413 | INFO     | total number of processed events: 400 (read)
[2025-10-11 14:32:47] 2025-10-11 18:32:11,413 | INFO     | executing command: lscpu
[2025-10-11 14:32:47] 2025-10-11 18:32:11,467 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 14:32:47] 2025-10-11 18:32:12,054 | INFO     | time since job start (1967s) is within the limit (172800.0s)
[2025-10-11 14:32:47] 2025-10-11 18:32:13,829 | INFO     | monitor loop #150: job 0:6838363390 is in state 'finished'
[2025-10-11 14:32:47] 2025-10-11 18:32:13,830 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:32:47] 2025-10-11 18:32:13,850 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 14:32:47] 2025-10-11 18:32:13,866 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3486.4987734374918
[2025-10-11 14:32:47] 2025-10-11 18:32:13,874 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6838363390/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 14:32:47] 2025-10-11 18:32:13,875 | INFO     | extracted standard info from prmon json
[2025-10-11 14:32:47] 2025-10-11 18:32:13,875 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 14:32:47] 2025-10-11 18:32:13,875 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 14:32:47] 2025-10-11 18:32:13,875 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 14:32:47] 2025-10-11 18:32:13,875 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 14:32:47] 2025-10-11 18:32:13,875 | INFO     | fitting pss+swap vs Time
[2025-10-11 14:32:47] 2025-10-11 18:32:13,875 | INFO     | sum of square deviations: 4837300.0
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | sum of deviations: 196244686.0
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | mean x: 1760206623.0
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | mean y: 2347435.0
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | -- intersect: -71407570499.74777
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | intersect: -71407570499.74777
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | chi2: 0.003148388020018826
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | -- intersect: -71407570499.74777
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | current memory leak: 40.57 B/s (using 25 data points, chi2=0.00)
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | could have reported an average CPU frequency of 3526 MHz (5 samples)
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | ..............................
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | . Timing measurements:
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | . get job = 0 s
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | . initial setup = 2 s
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | . payload setup = 3 s
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | . stage-in = 0 s
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | . payload execution = 1941 s
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | . stage-out = 0 s
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | . log creation = 0 s
[2025-10-11 14:32:47] 2025-10-11 18:32:13,876 | INFO     | ..............................
[2025-10-11 14:32:47] 2025-10-11 18:32:14,058 | INFO     | time since job start (1969s) is within the limit (172800.0s)
[2025-10-11 14:32:47] 2025-10-11 18:32:14,059 | INFO     | 1970s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 14:32:47] 2025-10-11 18:32:14,407 | INFO     | 
[2025-10-11 14:32:47] 2025-10-11 18:32:14,407 | INFO     | job summary report
[2025-10-11 14:32:47] 2025-10-11 18:32:14,407 | INFO     | --------------------------------------------------
[2025-10-11 14:32:47] 2025-10-11 18:32:14,407 | INFO     | PanDA job id: 6838363390
[2025-10-11 14:32:47] 2025-10-11 18:32:14,407 | INFO     | task id: 46676269
[2025-10-11 14:32:47] 2025-10-11 18:32:14,407 | INFO     | errors: (none)
[2025-10-11 14:32:47] 2025-10-11 18:32:14,407 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | pilot state: finished 
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | transexitcode: 0
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | exeerrorcode: 0
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | exeerrordiag: 
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | exitcode: 0
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | exitmsg: OK
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | cpuconsumptiontime: 21307 s
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | nevents: 400
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | neventsw: 0
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | pid: 4077434
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | pgrp: 4077434
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | corecount: 12
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | event service: False
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | sizes: {0: 2348851, 3: 2349113, 11: 2349141, 1948: 2374114, 1950: 2383112, 1951: 2383168, 1954: 2383522}
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | --------------------------------------------------
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | 
[2025-10-11 14:32:47] 2025-10-11 18:32:14,408 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-11 14:32:47] 2025-10-11 18:32:14,421 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,421 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,421 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,421 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,421 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,421 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,421 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,421 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,421 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,422 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,422 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,422 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,422 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,422 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,422 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,422 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,422 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,422 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 14:32:47] 2025-10-11 18:32:14,422 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,422 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 14:32:47] 2025-10-11 18:32:14,422 | INFO     | job 6838363390 has completed (purged errors)
[2025-10-11 14:32:47] 2025-10-11 18:32:14,422 | INFO     | overall cleanup function is called
[2025-10-11 14:32:47] 2025-10-11 18:32:15,426 | INFO     | --- collectZombieJob: --- 10, [4077434]
[2025-10-11 14:32:47] 2025-10-11 18:32:15,426 | INFO     | zombie collector waiting for pid 4077434
[2025-10-11 14:32:47] 2025-10-11 18:32:15,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 14:32:47] 2025-10-11 18:32:15,426 | INFO     | collected zombie processes
[2025-10-11 14:32:47] 2025-10-11 18:32:15,426 | INFO     | will attempt to kill all subprocesses of pid=4077434
[2025-10-11 14:32:47] 2025-10-11 18:32:15,677 | INFO     | process IDs to be killed: [4077434] (in reverse order)
[2025-10-11 14:32:47] 2025-10-11 18:32:15,766 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 14:32:47] 2025-10-11 18:32:15,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 14:32:47] 2025-10-11 18:32:15,781 | INFO     | did not find any defunct processes belonging to 4077434
[2025-10-11 14:32:47] 2025-10-11 18:32:15,793 | INFO     | did not find any defunct processes belonging to 4077434
[2025-10-11 14:32:47] 2025-10-11 18:32:15,794 | INFO     | ready for new job
[2025-10-11 14:32:47] 2025-10-11 18:32:15,794 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 14:32:47] 2025-10-11 18:32:15,794 | INFO     | ***************************************
[2025-10-11 14:32:47] 2025-10-11 18:32:15,794 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 14:32:47] 2025-10-11 18:32:15,795 | INFO     | ***************************************
[2025-10-11 14:32:47] 2025-10-11 18:32:15,795 | INFO     | 
[2025-10-11 14:32:47] 2025-10-11 18:32:15,810 | INFO     | architecture information:
[2025-10-11 14:32:47] 2025-10-11 18:32:15,810 | INFO     | executing command: cat /etc/os-release
[2025-10-11 14:32:47] 2025-10-11 18:32:15,820 | INFO     | cat /etc/os-release:
[2025-10-11 14:32:47] NAME="CentOS Linux"
[2025-10-11 14:32:47] VERSION="7 (Core)"
[2025-10-11 14:32:47] ID="centos"
[2025-10-11 14:32:47] ID_LIKE="rhel fedora"
[2025-10-11 14:32:47] VERSION_ID="7"
[2025-10-11 14:32:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 14:32:47] ANSI_COLOR="0;31"
[2025-10-11 14:32:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 14:32:47] HOME_URL="https://www.centos.org/"
[2025-10-11 14:32:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 14:32:47] 
[2025-10-11 14:32:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 14:32:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 14:32:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 14:32:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 14:32:47] 
[2025-10-11 14:32:47] 2025-10-11 18:32:15,820 | INFO     | ***************************************
[2025-10-11 14:32:47] 2025-10-11 18:32:16,323 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-11 14:32:47] 2025-10-11 18:32:16,336 | INFO     | sufficient remaining disk space (167476461568 B)
[2025-10-11 14:32:47] 2025-10-11 18:32:16,336 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 14:32:47] 2025-10-11 18:32:16,337 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 14:32:47] 2025-10-11 18:32:16,337 | INFO     | update_server=False
[2025-10-11 14:32:47] 2025-10-11 18:32:16,337 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 14:32:47] 2025-10-11 18:32:16,386 | INFO     | all data control threads have been joined
[2025-10-11 14:32:47] 2025-10-11 18:32:17,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:32:47] 2025-10-11 18:32:17,338 | INFO     | aborting loop
[2025-10-11 14:32:47] 2025-10-11 18:32:17,342 | INFO     | [job] retrieve thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:17,389 | INFO     | all payload control threads have been joined
[2025-10-11 14:32:47] 2025-10-11 18:32:17,392 | INFO     | [data] control thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:17,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 14:32:47] 2025-10-11 18:32:17,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 14:32:47] 2025-10-11 18:32:17,591 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:17,901 | INFO     | all job control threads have been joined
[2025-10-11 14:32:47] 2025-10-11 18:32:18,277 | INFO     | [payload] validate_post thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:18,342 | INFO     | [job] job monitor thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:18,343 | INFO     | [job] validate thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:18,380 | INFO     | [payload] failed_post thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:18,395 | INFO     | [payload] control thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:18,476 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:18,476 | INFO     | [data] copytool_in thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:18,493 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:18,907 | INFO     | [job] control thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:18,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:32:47] 2025-10-11 18:32:19,508 | INFO     | [data] copytool_out thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:19,922 | INFO     | [job] queue monitor thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:21,424 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:26,737 | INFO     | job.realtimelogging is not enabled
[2025-10-11 14:32:47] 2025-10-11 18:32:27,741 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 14:32:47] 2025-10-11 18:32:28,180 | INFO     | [monitor] cgroup control has ended
[2025-10-11 14:32:47] 2025-10-11 18:32:28,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140424183936832)>', '<ExcThread(monitor, started 140423410476800)>']
[2025-10-11 14:32:47] 2025-10-11 18:32:33,744 | INFO     | all workflow threads have been joined
[2025-10-11 14:32:47] 2025-10-11 18:32:33,745 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 14:32:47] 2025-10-11 18:32:33,745 | INFO     | traces error code: 0
[2025-10-11 14:32:47] 2025-10-11 18:32:33,745 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 14:32:47] 2025-10-11 18:32:47,491 | INFO     | PID=4056385 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 14:32:47] 2025-10-11 18:32:47,491 | INFO     | .. there are 12 such processes running
[2025-10-11 14:32:47] 2025-10-11 18:32:47,491 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 14:32:47] 2025-10-11 18:32:47,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 14:32:47] 2025-10-11 18:32:47,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 14:32:47] 2025-10-11 18:32:47,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 14:32:47] 2025-10-11 18:32:47,491 | INFO     | [monitor] control thread has ended
[2025-10-11 14:32:47] 2025-10-11 18:32:47,584 [wrapper] ==== pilot stdout END ====
[2025-10-11 14:32:47] 2025-10-11 18:32:47,586 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 14:32:47] 2025-10-11 18:32:47,588 [wrapper] pilotpid: 4056385
[2025-10-11 14:32:47] 2025-10-11 18:32:47,590 [wrapper] Pilot exit status: 0
[2025-10-11 14:32:47] 2025-10-11 18:32:47,597 [wrapper] pandaids: 6838363390
[2025-10-11 14:32:47] 2025-10-11 18:32:47,660 [wrapper] cleanup supervisor_pilot   38843 4056386
[2025-10-11 14:32:47] 2025-10-11 18:32:47,662 [wrapper] Test setup, not cleaning
[2025-10-11 14:32:47] 2025-10-11 18:32:47,663 [wrapper] apfmon messages muted
[2025-10-11 14:32:47] 2025-10-11 18:32:47,665 [wrapper] ==== wrapper stdout END ====
[2025-10-11 14:32:47] 2025-10-11 18:32:47,667 [wrapper] ==== wrapper stderr END ====
[2025-10-11 14:32:47]  *** Error codes and diagnostics ***
[2025-10-11 14:32:47]     "exeErrorCode": 0,
[2025-10-11 14:32:47]     "exeErrorDiag": "",
[2025-10-11 14:32:47]     "pilotErrorCode": 0,
[2025-10-11 14:32:47]     "pilotErrorDiag": "",
[2025-10-11 14:32:47]  *** Listing of results directory ***
[2025-10-11 14:32:47] total 408948
[2025-10-11 14:32:47] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 06:07 pilot3.tar.gz
[2025-10-11 14:32:47] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 06:10 queuedata.json
[2025-10-11 14:32:47] -rwx------. 1 boincer umatlas     36292 Oct 11 06:10 runpilot2-wrapper.sh
[2025-10-11 14:32:47] -rw-r--r--. 1 boincer umatlas       100 Oct 11 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 14:32:47] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 13:59 run_atlas
[2025-10-11 14:32:47] -rw-r--r--. 1 boincer umatlas       105 Oct 11 13:59 job.xml
[2025-10-11 14:32:47] -rw-r--r--. 2 boincer umatlas 219314599 Oct 11 13:59 EVNT.46676267._002246.pool.root.1
[2025-10-11 14:32:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:59 start_atlas.sh
[2025-10-11 14:32:47] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 13:59 shared
[2025-10-11 14:32:47] -rw-r--r--. 2 boincer umatlas    569684 Oct 11 13:59 input.tar.gz
[2025-10-11 14:32:47] -rw-r--r--. 1 boincer umatlas         0 Oct 11 13:59 boinc_lockfile
[2025-10-11 14:32:47] -rw-r--r--. 1 boincer umatlas      2547 Oct 11 13:59 pandaJob.out
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas    975520 Oct 11 13:59 agis_schedconf.cvmfs.json
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas   1560580 Oct 11 13:59 agis_ddmendpoints.agis.ALL.json
[2025-10-11 14:32:47] drwx------. 5 boincer umatlas      4096 Oct 11 13:59 pilot3
[2025-10-11 14:32:47] -rw-r--r--. 1 boincer umatlas      7164 Oct 11 14:29 init_data.xml
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas 194238246 Oct 11 14:31 HITS.46676269._055933.pool.root.1
[2025-10-11 14:32:47] -rw-r--r--. 1 boincer umatlas       529 Oct 11 14:31 boinc_task_state.xml
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas        95 Oct 11 14:32 pilot_heartbeat.json
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas      1029 Oct 11 14:32 memory_monitor_summary.json
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas    331049 Oct 11 14:32 log.46676269._055933.job.log.tgz.1
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas      7770 Oct 11 14:32 heartbeat.json
[2025-10-11 14:32:47] -rw-r--r--. 1 boincer umatlas        27 Oct 11 14:32 wrapper_checkpoint.txt
[2025-10-11 14:32:47] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 14:32 boinc_mmap_file
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas       823 Oct 11 14:32 pilotlog.txt
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas    321352 Oct 11 14:32 log.46676269._055933.job.log.1
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas       357 Oct 11 14:32 output.list
[2025-10-11 14:32:47] -rw-r--r--. 1 boincer umatlas       620 Oct 11 14:32 runtime_log
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas    675840 Oct 11 14:32 result.tar.gz
[2025-10-11 14:32:47] -rw-r--r--. 1 boincer umatlas      8695 Oct 11 14:32 runtime_log.err
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas       650 Oct 11 14:32 DZ5KDm3jlR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNAgNDm0Umi5n.diag
[2025-10-11 14:32:47] -rw-r--r--. 1 boincer umatlas     21851 Oct 11 14:32 stderr.txt
[2025-10-11 14:32:47] HITS file was successfully produced:
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas 194238246 Oct 11 14:31 shared/HITS.pool.root.1
[2025-10-11 14:32:47]  *** Contents of shared directory: ***
[2025-10-11 14:32:47] total 405108
[2025-10-11 14:32:47] -rw-r--r--. 2 boincer umatlas 219314599 Oct 11 13:59 ATLAS.root_0
[2025-10-11 14:32:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:59 start_atlas.sh
[2025-10-11 14:32:47] -rw-r--r--. 2 boincer umatlas    569684 Oct 11 13:59 input.tar.gz
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas 194238246 Oct 11 14:31 HITS.pool.root.1
[2025-10-11 14:32:47] -rw-------. 1 boincer umatlas    675840 Oct 11 14:32 result.tar.gz
14:32:49 (4048064): run_atlas exited; CPU time 21338.272489
14:32:49 (4048064): called boinc_finish(0)

</stderr_txt>
]]>

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