Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:34:39 (1221005): wrapper (7.7.26015): starting
16:34:39 (1221005): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 16:34:39] Arguments: --nthreads 8
[2025-10-11 16:34:39] Threads: 8
[2025-10-11 16:34:39] Checking for CVMFS
[2025-10-11 16:34:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:34:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:34:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:34:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:34:41] 2.13.2.0 2533812 128288 312300 151595 1 402 32478322 32935936 45740 16776704 0 366805177 99.695 277506088 19916 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 16:34:41] CVMFS is ok
[2025-10-11 16:34:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:34:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:34:41] Further information can be found at the LHC@home message board.
[2025-10-11 16:34:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:34:41] Checking for apptainer binary...
[2025-10-11 16:34:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:34:41] Running /usr/bin/apptainer --version
[2025-10-11 16:34:42] apptainer version 1.4.3-1.el9
[2025-10-11 16:34:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:34:42] c6-12-29-3.aglt2.org
[2025-10-11 16:34:42] apptainer works
[2025-10-11 16:34:42] Set ATHENA_PROC_NUMBER=8
[2025-10-11 16:34:42] Set ATHENA_CORE_NUMBER=8
[2025-10-11 16:34:43] Starting ATLAS job with PandaID=6838450802
[2025-10-11 16:34:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:37:55]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:37:55] 2025-10-12 01:36:56,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:37:55] 2025-10-12 01:36:57,254 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 21:37:55] 2025-10-12 01:36:57,261 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2595.3571562499997
[2025-10-11 21:37:55] 2025-10-12 01:36:57,279 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838450802/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 21:37:55] 2025-10-12 01:36:57,280 | INFO     | extracted standard info from prmon json
[2025-10-11 21:37:55] 2025-10-12 01:36:57,280 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 21:37:55] 2025-10-12 01:36:57,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 21:37:55] 2025-10-12 01:36:57,287 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:37:55] 2025-10-12 01:36:57,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:37:55] 2025-10-12 01:36:57,305 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:37:55] 2025-10-12 01:36:57,306 | INFO     | sum of square deviations: 7879884969.510231
[2025-10-11 21:37:55] 2025-10-12 01:36:57,317 | INFO     | sum of deviations: -14064548623.530628
[2025-10-11 21:37:55] 2025-10-12 01:36:57,317 | INFO     | mean x: 1760224024.9591837
[2025-10-11 21:37:55] 2025-10-12 01:36:57,317 | INFO     | mean y: 2091056.2891156462
[2025-10-11 21:37:55] 2025-10-12 01:36:57,317 | INFO     | -- intersect: 3143857272.8185387
[2025-10-11 21:37:55] 2025-10-12 01:36:57,317 | INFO     | intersect: 3143857272.8185387
[2025-10-11 21:37:55] 2025-10-12 01:36:57,318 | INFO     | chi2: 2.760429894846097
[2025-10-11 21:37:55] 2025-10-12 01:36:57,318 | INFO     | sum of square deviations: 7484673135.868479
[2025-10-11 21:37:55] 2025-10-12 01:36:57,341 | INFO     | sum of deviations: 6004877963.20069
[2025-10-11 21:37:55] 2025-10-12 01:36:57,341 | INFO     | mean x: 1760223872.4636679
[2025-10-11 21:37:55] 2025-10-12 01:36:57,341 | INFO     | mean y: 2098720.9238754325
[2025-10-11 21:37:55] 2025-10-12 01:36:57,341 | INFO     | -- intersect: -1410111184.596653
[2025-10-11 21:37:55] 2025-10-12 01:36:57,341 | INFO     | intersect: -1410111184.596653
[2025-10-11 21:37:55] 2025-10-12 01:36:57,342 | INFO     | chi2: 2.0964958669126985
[2025-10-11 21:37:55] 2025-10-12 01:36:57,349 | INFO     | current chi2=2.0964958669126985 (change=24.05183443249208 %)
[2025-10-11 21:37:55] 2025-10-12 01:36:57,349 | INFO     | right removable region: 288
[2025-10-11 21:37:55] 2025-10-12 01:36:57,354 | INFO     | sum of square deviations: 7484608475.937742
[2025-10-11 21:37:55] 2025-10-12 01:36:57,357 | INFO     | sum of deviations: -59065344545.27334
[2025-10-11 21:37:55] 2025-10-12 01:36:57,357 | INFO     | mean x: 1760224177.467128
[2025-10-11 21:37:55] 2025-10-12 01:36:57,357 | INFO     | mean y: 2108323.55017301
[2025-10-11 21:37:55] 2025-10-12 01:36:57,357 | INFO     | -- intersect: 13893048357.790262
[2025-10-11 21:37:55] 2025-10-12 01:36:57,357 | INFO     | intersect: 13893048357.790262
[2025-10-11 21:37:55] 2025-10-12 01:36:57,388 | INFO     | chi2: 1.09673243078385
[2025-10-11 21:37:55] 2025-10-12 01:36:57,388 | INFO     | current chi2=1.09673243078385 (change=60.26950610730882 %)
[2025-10-11 21:37:55] 2025-10-12 01:36:57,389 | INFO     | sum of square deviations: 7102774094.827473
[2025-10-11 21:37:55] 2025-10-12 01:36:57,391 | INFO     | sum of deviations: -69515903273.54932
[2025-10-11 21:37:55] 2025-10-12 01:36:57,392 | INFO     | mean x: 1760224329.975352
[2025-10-11 21:37:55] 2025-10-12 01:36:57,392 | INFO     | mean y: 2112457.4929577466
[2025-10-11 21:37:55] 2025-10-12 01:36:57,392 | INFO     | -- intersect: 17229688983.040184
[2025-10-11 21:37:55] 2025-10-12 01:36:57,392 | INFO     | intersect: 17229688983.040184
[2025-10-11 21:37:55] 2025-10-12 01:36:57,393 | INFO     | chi2: 0.9248270341071391
[2025-10-11 21:37:55] 2025-10-12 01:36:57,401 | INFO     | current chi2=0.9248270341071391 (change=15.674324188065425 %)
[2025-10-11 21:37:55] 2025-10-12 01:36:57,401 | INFO     | left removable region: 20
[2025-10-11 21:37:55] 2025-10-12 01:36:57,402 | INFO     | sum of square deviations: 5968693564.817183
[2025-10-11 21:37:55] 2025-10-12 01:36:57,404 | INFO     | sum of deviations: -36291219936.126854
[2025-10-11 21:37:55] 2025-10-12 01:36:57,405 | INFO     | mean x: 1760224451.9738805
[2025-10-11 21:37:55] 2025-10-12 01:36:57,405 | INFO     | mean y: 2115657.4104477614
[2025-10-11 21:37:55] 2025-10-12 01:36:57,405 | INFO     | -- intersect: 10704741287.260334
[2025-10-11 21:37:55] 2025-10-12 01:36:57,428 | INFO     | intersect: 10704741287.260334
[2025-10-11 21:37:55] 2025-10-12 01:36:57,429 | INFO     | chi2: 0.22958677956965765
[2025-10-11 21:37:55] 2025-10-12 01:36:57,429 | INFO     | -- intersect: 10704741287.260334
[2025-10-11 21:37:55] 2025-10-12 01:36:57,429 | INFO     | current memory leak: -6.08 B/s (using 268 data points, chi2=0.23)
[2025-10-11 21:37:55] 2025-10-12 01:36:57,430 | INFO     | could have reported an average CPU frequency of 2587 MHz (13 samples)
[2025-10-11 21:37:55] 2025-10-12 01:36:57,430 | INFO     | ..............................
[2025-10-11 21:37:55] 2025-10-12 01:36:57,430 | INFO     | . Timing measurements:
[2025-10-11 21:37:55] 2025-10-12 01:36:57,430 | INFO     | . get job = 0 s
[2025-10-11 21:37:55] 2025-10-12 01:36:57,431 | INFO     | . initial setup = 7 s
[2025-10-11 21:37:55] 2025-10-12 01:36:57,431 | INFO     | . payload setup = 35 s
[2025-10-11 21:37:55] 2025-10-12 01:36:57,431 | INFO     | . stage-in = 0 s
[2025-10-11 21:37:55] 2025-10-12 01:36:57,431 | INFO     | . payload execution = 17920 s
[2025-10-11 21:37:55] 2025-10-12 01:36:57,431 | INFO     | . stage-out = 5 s
[2025-10-11 21:37:55] 2025-10-12 01:36:57,431 | INFO     | . log creation = 0 s
[2025-10-11 21:37:55] 2025-10-12 01:36:57,431 | INFO     | ..............................
[2025-10-11 21:37:55] 2025-10-12 01:36:57,822 | INFO     | time since job start (18065s) is within the limit (172800.0s)
[2025-10-11 21:37:55] 2025-10-12 01:36:58,147 | INFO     | 
[2025-10-11 21:37:55] 2025-10-12 01:36:58,147 | INFO     | job summary report
[2025-10-11 21:37:55] 2025-10-12 01:36:58,147 | INFO     | --------------------------------------------------
[2025-10-11 21:37:55] 2025-10-12 01:36:58,147 | INFO     | PanDA job id: 6838450802
[2025-10-11 21:37:55] 2025-10-12 01:36:58,147 | INFO     | task id: 46676269
[2025-10-11 21:37:55] 2025-10-12 01:36:58,147 | INFO     | errors: (none)
[2025-10-11 21:37:55] 2025-10-12 01:36:58,148 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:37:55] 2025-10-12 01:36:58,148 | INFO     | pilot state: finished 
[2025-10-11 21:37:55] 2025-10-12 01:36:58,148 | INFO     | transexitcode: 0
[2025-10-11 21:37:55] 2025-10-12 01:36:58,148 | INFO     | exeerrorcode: 0
[2025-10-11 21:37:55] 2025-10-12 01:36:58,148 | INFO     | exeerrordiag: 
[2025-10-11 21:37:55] 2025-10-12 01:36:58,148 | INFO     | exitcode: 0
[2025-10-11 21:37:55] 2025-10-12 01:36:58,148 | INFO     | exitmsg: OK
[2025-10-11 21:37:55] 2025-10-12 01:36:58,148 | INFO     | cpuconsumptiontime: 45867 s
[2025-10-11 21:37:55] 2025-10-12 01:36:58,148 | INFO     | nevents: 400
[2025-10-11 21:37:55] 2025-10-12 01:36:58,148 | INFO     | neventsw: 0
[2025-10-11 21:37:55] 2025-10-12 01:36:58,148 | INFO     | pid: 1257969
[2025-10-11 21:37:55] 2025-10-12 01:36:58,148 | INFO     | pgrp: 1257969
[2025-10-11 21:37:55] 2025-10-12 01:36:58,149 | INFO     | corecount: 8
[2025-10-11 21:37:55] 2025-10-12 01:36:58,149 | INFO     | event service: False
[2025-10-11 21:37:55] 2025-10-12 01:36:58,149 | INFO     | sizes: {0: 2348634, 1: 2348662, 2: 2348833, 3: 2348861, 14: 2348889, 25: 2348917, 32: 2349335, 36: 2349363, 17962: 2381553, 17963: 2381552, 17969: 2390606, 17970: 
[2025-10-11 21:37:55] 2025-10-12 01:36:58,149 | INFO     | --------------------------------------------------
[2025-10-11 21:37:55] 2025-10-12 01:36:58,149 | INFO     | 
[2025-10-11 21:37:55] 2025-10-12 01:36:58,149 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 21:37:55] 2025-10-12 01:36:58,288 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,288 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,289 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,289 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,289 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,289 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,289 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,290 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,290 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,290 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,290 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:37:55] 2025-10-12 01:36:58,290 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,290 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:37:55] 2025-10-12 01:36:58,290 | INFO     | job 6838450802 has completed (purged errors)
[2025-10-11 21:37:55] 2025-10-12 01:36:58,290 | INFO     | overall cleanup function is called
[2025-10-11 21:37:55] 2025-10-12 01:36:59,320 | INFO     | --- collectZombieJob: --- 10, [1257969]
[2025-10-11 21:37:55] 2025-10-12 01:36:59,320 | INFO     | zombie collector waiting for pid 1257969
[2025-10-11 21:37:55] 2025-10-12 01:36:59,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:37:55] 2025-10-12 01:36:59,320 | INFO     | collected zombie processes
[2025-10-11 21:37:55] 2025-10-12 01:36:59,321 | INFO     | will attempt to kill all subprocesses of pid=1257969
[2025-10-11 21:37:55] 2025-10-12 01:37:01,787 | INFO     | process IDs to be killed: [1257969] (in reverse order)
[2025-10-11 21:37:55] 2025-10-12 01:37:02,848 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:37:55] 2025-10-12 01:37:02,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:37:55] 2025-10-12 01:37:02,913 | INFO     | did not find any defunct processes belonging to 1257969
[2025-10-11 21:37:55] 2025-10-12 01:37:02,946 | INFO     | did not find any defunct processes belonging to 1257969
[2025-10-11 21:37:55] 2025-10-12 01:37:02,947 | INFO     | ready for new job
[2025-10-11 21:37:55] 2025-10-12 01:37:02,952 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:37:55] 2025-10-12 01:37:02,955 | INFO     | ***************************************
[2025-10-11 21:37:55] 2025-10-12 01:37:02,955 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:37:55] 2025-10-12 01:37:02,955 | INFO     | ***************************************
[2025-10-11 21:37:55] 2025-10-12 01:37:02,955 | INFO     | 
[2025-10-11 21:37:55] 2025-10-12 01:37:02,993 | INFO     | architecture information:
[2025-10-11 21:37:55] 2025-10-12 01:37:03,004 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:37:55] 2025-10-12 01:37:03,070 | INFO     | cat /etc/os-release:
[2025-10-11 21:37:55] NAME="CentOS Linux"
[2025-10-11 21:37:55] VERSION="7 (Core)"
[2025-10-11 21:37:55] ID="centos"
[2025-10-11 21:37:55] ID_LIKE="rhel fedora"
[2025-10-11 21:37:55] VERSION_ID="7"
[2025-10-11 21:37:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:37:55] ANSI_COLOR="0;31"
[2025-10-11 21:37:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:37:55] HOME_URL="https://www.centos.org/"
[2025-10-11 21:37:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:37:55] 
[2025-10-11 21:37:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:37:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:37:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:37:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:37:55] 
[2025-10-11 21:37:55] 2025-10-12 01:37:03,070 | INFO     | ***************************************
[2025-10-11 21:37:55] 2025-10-12 01:37:03,578 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 21:37:55] 2025-10-12 01:37:03,684 | INFO     | sufficient remaining disk space (94067752960 B)
[2025-10-11 21:37:55] 2025-10-12 01:37:03,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:37:55] 2025-10-12 01:37:03,685 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:37:55] 2025-10-12 01:37:03,685 | INFO     | update_server=False
[2025-10-11 21:37:55] 2025-10-12 01:37:03,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:37:55] 2025-10-12 01:37:03,686 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:37:55] 2025-10-12 01:37:03,699 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:37:55] 2025-10-12 01:37:03,937 | INFO     | all job control threads have been joined
[2025-10-11 21:37:55] 2025-10-12 01:37:04,075 | INFO     | all payload control threads have been joined
[2025-10-11 21:37:55] 2025-10-12 01:37:04,412 | INFO     | all data control threads have been joined
[2025-10-11 21:37:55] 2025-10-12 01:37:04,680 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:37:55] 2025-10-12 01:37:04,680 | INFO     | aborting loop
[2025-10-11 21:37:55] 2025-10-12 01:37:04,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:37:55] 2025-10-12 01:37:04,717 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:04,727 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:04,918 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:04,944 | INFO     | [job] control thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:05,086 | INFO     | [payload] control thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:05,322 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:05,431 | INFO     | [data] control thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:05,535 | INFO     | [job] validate thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:05,645 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:05,707 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:05,708 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:05,708 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:06,190 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:06,297 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:06,710 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:07,699 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:37:55] 2025-10-12 01:37:25,414 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:37:55] 2025-10-12 01:37:26,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157343995712)>', '<ExcThread(monitor, started 140156703065856)>']
[2025-10-11 21:37:55] 2025-10-12 01:37:31,464 | INFO     | all workflow threads have been joined
[2025-10-11 21:37:55] 2025-10-12 01:37:31,465 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:37:55] 2025-10-12 01:37:31,465 | INFO     | traces error code: 0
[2025-10-11 21:37:55] 2025-10-12 01:37:31,466 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:37:55] 2025-10-12 01:37:32,711 | INFO     | PID=1234882 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:37:55] 2025-10-12 01:37:32,712 | INFO     | .. there are 58 such processes running
[2025-10-11 21:37:55] 2025-10-12 01:37:32,712 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:37:55] 2025-10-12 01:37:32,712 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:37:55] 2025-10-12 01:37:32,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:37:55] 2025-10-12 01:37:32,713 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:37:55] 2025-10-12 01:37:32,713 | CRITICAL | thread 'MainThread' is not alive
[2025-10-11 21:37:55] 2025-10-12 01:37:32,713 | INFO     | [monitor] control thread has ended
[2025-10-11 21:37:55] 2025-10-12 01:37:33,420 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:37:55] 2025-10-12 01:37:33,434 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:37:55] 2025-10-12 01:37:33,438 [wrapper] pilotpid: 1234882
[2025-10-11 21:37:55] 2025-10-12 01:37:33,441 [wrapper] Pilot exit status: 0
[2025-10-11 21:37:55] 2025-10-12 01:37:33,591 [wrapper] pandaids: 6838450802
[2025-10-11 21:37:55] 2025-10-12 01:37:34,655 [wrapper] cleanup supervisor_pilot 2483511 1234883
[2025-10-11 21:37:55] 2025-10-12 01:37:34,689 [wrapper] Test setup, not cleaning
[2025-10-11 21:37:55] 2025-10-12 01:37:34,722 [wrapper] apfmon messages muted
[2025-10-11 21:37:55] 2025-10-12 01:37:34,746 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:37:55] 2025-10-12 01:37:34,824 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:37:55]  *** Error codes and diagnostics ***
[2025-10-11 21:37:55]     "exeErrorCode": 0,
[2025-10-11 21:37:55]     "exeErrorDiag": "",
[2025-10-11 21:37:55]     "pilotErrorCode": 0,
[2025-10-11 21:37:55]     "pilotErrorDiag": "",
[2025-10-11 21:37:55]  *** Listing of results directory ***
[2025-10-11 21:37:55] total 410164
[2025-10-11 21:37:55] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 08:28 pilot3.tar.gz
[2025-10-11 21:37:55] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 08:37 queuedata.json
[2025-10-11 21:37:55] -rwx------. 1 boincer umatlas     36292 Oct 11 08:38 runpilot2-wrapper.sh
[2025-10-11 21:37:55] -rw-r--r--. 1 boincer umatlas       100 Oct 11 16:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:37:55] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 16:34 run_atlas
[2025-10-11 21:37:55] -rw-r--r--. 1 boincer umatlas       105 Oct 11 16:34 job.xml
[2025-10-11 21:37:55] -rw-r--r--. 2 boincer umatlas 219179368 Oct 11 16:34 EVNT.46676267._000502.pool.root.1
[2025-10-11 21:37:55] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:34 start_atlas.sh
[2025-10-11 21:37:55] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 16:34 shared
[2025-10-11 21:37:55] -rw-r--r--. 2 boincer umatlas    569685 Oct 11 16:34 input.tar.gz
[2025-10-11 21:37:55] -rw-r--r--. 1 boincer umatlas         0 Oct 11 16:34 boinc_lockfile
[2025-10-11 21:37:55] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 16:34 pandaJob.out
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas    975528 Oct 11 16:35 agis_schedconf.cvmfs.json
[2025-10-11 21:37:55] drwx------. 5 boincer umatlas      4096 Oct 11 16:35 pilot3
[2025-10-11 21:37:55] -rw-r--r--. 1 boincer umatlas      6861 Oct 11 21:31 init_data.xml
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas 191821471 Oct 11 21:34 HITS.46676269._057749.pool.root.1
[2025-10-11 21:37:55] -rw-r--r--. 1 boincer umatlas       530 Oct 11 21:35 boinc_task_state.xml
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas      1045 Oct 11 21:36 memory_monitor_summary.json
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas   1560580 Oct 11 21:36 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas    495732 Oct 11 21:36 log.46676269._057749.job.log.tgz.1
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas        95 Oct 11 21:36 pilot_heartbeat.json
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas      7834 Oct 11 21:36 heartbeat.json
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas       893 Oct 11 21:37 pilotlog.txt
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas   2057718 Oct 11 21:37 log.46676269._057749.job.log.1
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas       357 Oct 11 21:37 output.list
[2025-10-11 21:37:55] -rw-r--r--. 1 boincer umatlas       620 Oct 11 21:37 runtime_log
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas   2570240 Oct 11 21:37 result.tar.gz
[2025-10-11 21:37:55] -rw-r--r--. 1 boincer umatlas      8714 Oct 11 21:37 runtime_log.err
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas       658 Oct 11 21:37 aFmKDm52nR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFRgNDmlxzR6m.diag
[2025-10-11 21:37:55] -rw-r--r--. 1 boincer umatlas        28 Oct 11 21:37 wrapper_checkpoint.txt
[2025-10-11 21:37:55] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:37 boinc_mmap_file
[2025-10-11 21:37:55] -rw-r--r--. 1 boincer umatlas     21229 Oct 11 21:37 stderr.txt
[2025-10-11 21:37:55] HITS file was successfully produced:
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas 191821471 Oct 11 21:34 shared/HITS.pool.root.1
[2025-10-11 21:37:55]  *** Contents of shared directory: ***
[2025-10-11 21:37:55] total 404464
[2025-10-11 21:37:55] -rw-r--r--. 2 boincer umatlas 219179368 Oct 11 16:34 ATLAS.root_0
[2025-10-11 21:37:55] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:34 start_atlas.sh
[2025-10-11 21:37:55] -rw-r--r--. 2 boincer umatlas    569685 Oct 11 16:34 input.tar.gz
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas 191821471 Oct 11 21:34 HITS.pool.root.1
[2025-10-11 21:37:55] -rw-------. 1 boincer umatlas   2570240 Oct 11 21:37 result.tar.gz
21:37:57 (1221005): run_atlas exited; CPU time 46785.182314
21:37:57 (1221005): called boinc_finish(0)

</stderr_txt>
]]>

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