Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:06:01 (27907): wrapper (7.7.26015): starting
14:06:01 (27907): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 14:06:01] Arguments: --nthreads 8
[2025-10-11 14:06:01] Threads: 8
[2025-10-11 14:06:01] Checking for CVMFS
[2025-10-11 14:06:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:06:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:06:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:06:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:06:02] 2.11.2.0 2791 192939 79080 151592 3 1 11706015 20275200 1 130560 1 67641796 99.976 8609347 24228 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 14:06:02] CVMFS is ok
[2025-10-11 14:06:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:06:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:06:02] Further information can be found at the LHC@home message board.
[2025-10-11 14:06:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:06:02] Checking for apptainer binary...
[2025-10-11 14:06:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:06:02] Running /usr/bin/apptainer --version
[2025-10-11 14:06:02] apptainer version 1.3.2-1.el7
[2025-10-11 14:06:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:06:04] c-204-3.aglt2.org
[2025-10-11 14:06:04] apptainer works
[2025-10-11 14:06:04] Set ATHENA_PROC_NUMBER=8
[2025-10-11 14:06:04] Set ATHENA_CORE_NUMBER=8
[2025-10-11 14:06:04] Starting ATLAS job with PandaID=6838451542
[2025-10-11 14:06:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 16:22:41]  *** The last 200 lines of the pilot log: ***
[2025-10-11 16:22:41] 2025-10-11 20:21:33,522 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 16:22:41] 2025-10-11 20:21:33,522 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 16:22:41] 2025-10-11 20:21:33,522 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 16:22:41] 2025-10-11 20:21:33,523 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 16:22:41] 2025-10-11 20:21:33,526 | INFO     | fitting pss+swap vs Time
[2025-10-11 16:22:41] 2025-10-11 20:21:33,526 | INFO     | sum of square deviations: 729472282.0
[2025-10-11 16:22:41] 2025-10-11 20:21:33,527 | INFO     | sum of deviations: 11733412708.000002
[2025-10-11 16:22:41] 2025-10-11 20:21:33,527 | INFO     | mean x: 1760210040.0
[2025-10-11 16:22:41] 2025-10-11 20:21:33,527 | INFO     | mean y: 2467232.714285714
[2025-10-11 16:22:41] 2025-10-11 20:21:33,527 | INFO     | -- intersect: -28310151850.57693
[2025-10-11 16:22:41] 2025-10-11 20:21:33,527 | INFO     | intersect: -28310151850.57693
[2025-10-11 16:22:41] 2025-10-11 20:21:33,528 | INFO     | chi2: 2.261897586729243
[2025-10-11 16:22:41] 2025-10-11 20:21:33,528 | INFO     | sum of square deviations: 650252192.0
[2025-10-11 16:22:41] 2025-10-11 20:21:33,529 | INFO     | sum of deviations: 19922686711.5
[2025-10-11 16:22:41] 2025-10-11 20:21:33,529 | INFO     | mean x: 1760209887.5
[2025-10-11 16:22:41] 2025-10-11 20:21:33,529 | INFO     | mean y: 2482481.6171875
[2025-10-11 16:22:41] 2025-10-11 20:21:33,529 | INFO     | -- intersect: -53927532005.972824
[2025-10-11 16:22:41] 2025-10-11 20:21:33,529 | INFO     | intersect: -53927532005.972824
[2025-10-11 16:22:41] 2025-10-11 20:21:33,529 | INFO     | chi2: 1.492283163727586
[2025-10-11 16:22:41] 2025-10-11 20:21:33,530 | INFO     | current chi2=1.492283163727586 (change=34.025166635176326 %)
[2025-10-11 16:22:41] 2025-10-11 20:21:33,530 | INFO     | sum of square deviations: 576985702.0
[2025-10-11 16:22:41] 2025-10-11 20:21:33,530 | INFO     | sum of deviations: 19234334010.999996
[2025-10-11 16:22:41] 2025-10-11 20:21:33,531 | INFO     | mean x: 1760209735.0
[2025-10-11 16:22:41] 2025-10-11 20:21:33,531 | INFO     | mean y: 2481047.7154471544
[2025-10-11 16:22:41] 2025-10-11 20:21:33,531 | INFO     | -- intersect: -58675683515.197395
[2025-10-11 16:22:41] 2025-10-11 20:21:33,531 | INFO     | intersect: -58675683515.197395
[2025-10-11 16:22:41] 2025-10-11 20:21:33,531 | INFO     | chi2: 1.4932382646111442
[2025-10-11 16:22:41] 2025-10-11 20:21:33,531 | INFO     | current chi2=1.4932382646111442 (change=-0.06400265759029668 %)
[2025-10-11 16:22:41] 2025-10-11 20:21:33,531 | INFO     | right removable region: 122
[2025-10-11 16:22:41] 2025-10-11 20:21:33,532 | INFO     | sum of square deviations: 650252192.0
[2025-10-11 16:22:41] 2025-10-11 20:21:33,532 | INFO     | sum of deviations: -8145302672.0
[2025-10-11 16:22:41] 2025-10-11 20:21:33,532 | INFO     | mean x: 1760210192.5
[2025-10-11 16:22:41] 2025-10-11 20:21:33,533 | INFO     | mean y: 2504842.625
[2025-10-11 16:22:41] 2025-10-11 20:21:33,533 | INFO     | -- intersect: 22051557441.97692
[2025-10-11 16:22:41] 2025-10-11 20:21:33,533 | INFO     | intersect: 22051557441.97692
[2025-10-11 16:22:41] 2025-10-11 20:21:33,533 | INFO     | chi2: 0.8373907560429757
[2025-10-11 16:22:41] 2025-10-11 20:21:33,533 | INFO     | current chi2=0.8373907560429757 (change=62.97839650406707 %)
[2025-10-11 16:22:41] 2025-10-11 20:21:33,533 | INFO     | sum of square deviations: 576985702.0
[2025-10-11 16:22:41] 2025-10-11 20:21:33,534 | INFO     | sum of deviations: -10864026312.0
[2025-10-11 16:22:41] 2025-10-11 20:21:33,534 | INFO     | mean x: 1760210345.0
[2025-10-11 16:22:41] 2025-10-11 20:21:33,534 | INFO     | mean y: 2510534.1463414636
[2025-10-11 16:22:41] 2025-10-11 20:21:33,534 | INFO     | -- intersect: 33145396807.495625
[2025-10-11 16:22:41] 2025-10-11 20:21:33,535 | INFO     | intersect: 33145396807.495625
[2025-10-11 16:22:41] 2025-10-11 20:21:33,535 | INFO     | chi2: 0.8034787452185334
[2025-10-11 16:22:41] 2025-10-11 20:21:33,535 | INFO     | current chi2=0.8034787452185334 (change=4.049723570473949 %)
[2025-10-11 16:22:41] 2025-10-11 20:21:33,535 | INFO     | left removable region: 20
[2025-10-11 16:22:41] 2025-10-11 20:21:33,535 | INFO     | sum of square deviations: 329031285.5
[2025-10-11 16:22:41] 2025-10-11 20:21:33,536 | INFO     | sum of deviations: -2741193295.0
[2025-10-11 16:22:41] 2025-10-11 20:21:33,536 | INFO     | mean x: 1760210314.5
[2025-10-11 16:22:41] 2025-10-11 20:21:33,536 | INFO     | mean y: 2530868.0196078434
[2025-10-11 16:22:41] 2025-10-11 20:21:33,536 | INFO     | -- intersect: 14667023044.090328
[2025-10-11 16:22:41] 2025-10-11 20:21:33,536 | INFO     | intersect: 14667023044.090328
[2025-10-11 16:22:41] 2025-10-11 20:21:33,537 | INFO     | chi2: 0.0025822774631895436
[2025-10-11 16:22:41] 2025-10-11 20:21:33,537 | INFO     | -- intersect: 14667023044.090328
[2025-10-11 16:22:41] 2025-10-11 20:21:33,537 | INFO     | current memory leak: -8.33 B/s (using 102 data points, chi2=0.00)
[2025-10-11 16:22:41] 2025-10-11 20:21:33,537 | INFO     | could have reported an average CPU frequency of 1991 MHz (8 samples)
[2025-10-11 16:22:41] 2025-10-11 20:21:33,537 | INFO     | ..............................
[2025-10-11 16:22:41] 2025-10-11 20:21:33,537 | INFO     | . Timing measurements:
[2025-10-11 16:22:41] 2025-10-11 20:21:33,538 | INFO     | . get job = 0 s
[2025-10-11 16:22:41] 2025-10-11 20:21:33,538 | INFO     | . initial setup = 2 s
[2025-10-11 16:22:41] 2025-10-11 20:21:33,538 | INFO     | . payload setup = 8 s
[2025-10-11 16:22:41] 2025-10-11 20:21:33,538 | INFO     | . stage-in = 0 s
[2025-10-11 16:22:41] 2025-10-11 20:21:33,538 | INFO     | . payload execution = 8069 s
[2025-10-11 16:22:41] 2025-10-11 20:21:33,538 | INFO     | . stage-out = 0 s
[2025-10-11 16:22:41] 2025-10-11 20:21:33,538 | INFO     | . log creation = 0 s
[2025-10-11 16:22:41] 2025-10-11 20:21:33,538 | INFO     | ..............................
[2025-10-11 16:22:41] 2025-10-11 20:21:34,096 | INFO     | 
[2025-10-11 16:22:41] 2025-10-11 20:21:34,097 | INFO     | job summary report
[2025-10-11 16:22:41] 2025-10-11 20:21:34,097 | INFO     | --------------------------------------------------
[2025-10-11 16:22:41] 2025-10-11 20:21:34,097 | INFO     | PanDA job id: 6838451542
[2025-10-11 16:22:41] 2025-10-11 20:21:34,097 | INFO     | task id: 46676269
[2025-10-11 16:22:41] 2025-10-11 20:21:34,097 | INFO     | errors: (none)
[2025-10-11 16:22:41] 2025-10-11 20:21:34,097 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 16:22:41] 2025-10-11 20:21:34,098 | INFO     | pilot state: finished 
[2025-10-11 16:22:41] 2025-10-11 20:21:34,098 | INFO     | transexitcode: 0
[2025-10-11 16:22:41] 2025-10-11 20:21:34,098 | INFO     | exeerrorcode: 0
[2025-10-11 16:22:41] 2025-10-11 20:21:34,098 | INFO     | exeerrordiag: 
[2025-10-11 16:22:41] 2025-10-11 20:21:34,098 | INFO     | exitcode: 0
[2025-10-11 16:22:41] 2025-10-11 20:21:34,098 | INFO     | exitmsg: OK
[2025-10-11 16:22:41] 2025-10-11 20:21:34,099 | INFO     | cpuconsumptiontime: 58896 s
[2025-10-11 16:22:41] 2025-10-11 20:21:34,099 | INFO     | nevents: 400
[2025-10-11 16:22:41] 2025-10-11 20:21:34,099 | INFO     | neventsw: 0
[2025-10-11 16:22:41] 2025-10-11 20:21:34,099 | INFO     | pid: 5815
[2025-10-11 16:22:41] 2025-10-11 20:21:34,099 | INFO     | pgrp: 5815
[2025-10-11 16:22:41] 2025-10-11 20:21:34,099 | INFO     | corecount: 8
[2025-10-11 16:22:41] 2025-10-11 20:21:34,099 | INFO     | event service: False
[2025-10-11 16:22:41] 2025-10-11 20:21:34,100 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 8081: 2376859, 8082: 2385857, 8086: 2385913, 8094: 2386235}
[2025-10-11 16:22:41] 2025-10-11 20:21:34,100 | INFO     | --------------------------------------------------
[2025-10-11 16:22:41] 2025-10-11 20:21:34,100 | INFO     | 
[2025-10-11 16:22:41] 2025-10-11 20:21:34,100 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 16:22:41] 2025-10-11 20:21:34,129 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,129 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,129 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,129 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,130 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,130 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,131 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,131 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,131 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,131 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,131 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,131 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,132 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,132 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,132 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 16:22:41] 2025-10-11 20:21:34,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,132 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 16:22:41] 2025-10-11 20:21:34,133 | INFO     | job 6838451542 has completed (purged errors)
[2025-10-11 16:22:41] 2025-10-11 20:21:34,133 | INFO     | overall cleanup function is called
[2025-10-11 16:22:41] 2025-10-11 20:21:35,141 | INFO     | --- collectZombieJob: --- 10, [5815]
[2025-10-11 16:22:41] 2025-10-11 20:21:35,141 | INFO     | zombie collector waiting for pid 5815
[2025-10-11 16:22:41] 2025-10-11 20:21:35,141 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 16:22:41] 2025-10-11 20:21:35,142 | INFO     | collected zombie processes
[2025-10-11 16:22:41] 2025-10-11 20:21:35,142 | INFO     | will attempt to kill all subprocesses of pid=5815
[2025-10-11 16:22:41] 2025-10-11 20:21:35,235 | INFO     | process IDs to be killed: [5815] (in reverse order)
[2025-10-11 16:22:41] 2025-10-11 20:21:35,296 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 16:22:41] 2025-10-11 20:21:35,297 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 16:22:41] 2025-10-11 20:21:35,301 | INFO     | did not find any defunct processes belonging to 5815
[2025-10-11 16:22:41] 2025-10-11 20:21:35,304 | INFO     | did not find any defunct processes belonging to 5815
[2025-10-11 16:22:41] 2025-10-11 20:21:35,305 | INFO     | ready for new job
[2025-10-11 16:22:41] 2025-10-11 20:21:35,305 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 16:22:41] 2025-10-11 20:21:35,306 | INFO     | ***************************************
[2025-10-11 16:22:41] 2025-10-11 20:21:35,307 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 16:22:41] 2025-10-11 20:21:35,307 | INFO     | ***************************************
[2025-10-11 16:22:41] 2025-10-11 20:21:35,307 | INFO     | 
[2025-10-11 16:22:41] 2025-10-11 20:21:35,307 | INFO     | architecture information:
[2025-10-11 16:22:41] 2025-10-11 20:21:35,308 | INFO     | executing command: cat /etc/os-release
[2025-10-11 16:22:41] 2025-10-11 20:21:35,325 | INFO     | cat /etc/os-release:
[2025-10-11 16:22:41] NAME="CentOS Linux"
[2025-10-11 16:22:41] VERSION="7 (Core)"
[2025-10-11 16:22:41] ID="centos"
[2025-10-11 16:22:41] ID_LIKE="rhel fedora"
[2025-10-11 16:22:41] VERSION_ID="7"
[2025-10-11 16:22:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 16:22:41] ANSI_COLOR="0;31"
[2025-10-11 16:22:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 16:22:41] HOME_URL="https://www.centos.org/"
[2025-10-11 16:22:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 16:22:41] 
[2025-10-11 16:22:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 16:22:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 16:22:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 16:22:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 16:22:41] 
[2025-10-11 16:22:41] 2025-10-11 20:21:35,325 | INFO     | ***************************************
[2025-10-11 16:22:41] 2025-10-11 20:21:35,829 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 16:22:41] 2025-10-11 20:21:35,849 | INFO     | sufficient remaining disk space (18579718144 B)
[2025-10-11 16:22:41] 2025-10-11 20:21:35,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 16:22:41] 2025-10-11 20:21:35,850 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 16:22:41] 2025-10-11 20:21:35,850 | INFO     | update_server=False
[2025-10-11 16:22:41] 2025-10-11 20:21:35,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 16:22:41] 2025-10-11 20:21:35,851 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 16:22:41] 2025-10-11 20:21:35,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 16:22:41] 2025-10-11 20:21:35,851 | INFO     | aborting loop
[2025-10-11 16:22:41] 2025-10-11 20:21:35,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 16:22:41] 2025-10-11 20:21:36,694 | INFO     | all data control threads have been joined
[2025-10-11 16:22:41] 2025-10-11 20:21:36,812 | INFO     | all payload control threads have been joined
[2025-10-11 16:22:41] 2025-10-11 20:21:36,856 | INFO     | [job] retrieve thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:36,857 | INFO     | [job] job monitor thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:36,926 | INFO     | all job control threads have been joined
[2025-10-11 16:22:41] 2025-10-11 20:21:37,034 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:37,083 | INFO     | [job] validate thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:37,217 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:37,290 | INFO     | [data] copytool_in thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:37,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:37,700 | INFO     | [data] control thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:37,818 | INFO     | [payload] control thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:37,855 | INFO     | [data] copytool_out thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:37,932 | INFO     | [job] control thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:37,947 | INFO     | [payload] validate_post thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:38,135 | INFO     | [payload] failed_post thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:38,332 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:38,642 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 16:22:41] 2025-10-11 20:21:39,647 | INFO     | [job] queue monitor thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:21:39,979 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 16:22:41] 2025-10-11 20:22:06,322 | INFO     | PID=31728 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 16:22:41] 2025-10-11 20:22:06,322 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 16:22:41] 2025-10-11 20:22:06,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 16:22:41] 2025-10-11 20:22:06,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 16:22:41] 2025-10-11 20:22:34,763 | INFO     | [monitor] cgroup control has ended
[2025-10-11 16:22:41] 2025-10-11 20:22:35,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140339160315712)>', '<ExcThread(monitor, started 140338433869568)>']
[2025-10-11 16:22:41] 2025-10-11 20:22:36,462 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 16:22:41] 2025-10-11 20:22:36,463 | INFO     | [monitor] control thread has ended
[2025-10-11 16:22:41] 2025-10-11 20:22:40,795 | INFO     | all workflow threads have been joined
[2025-10-11 16:22:41] 2025-10-11 20:22:40,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 16:22:41] 2025-10-11 20:22:40,796 | INFO     | traces error code: 0
[2025-10-11 16:22:41] 2025-10-11 20:22:40,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 16:22:41] 2025-10-11 20:22:40,909 [wrapper] ==== pilot stdout END ====
[2025-10-11 16:22:41] 2025-10-11 20:22:40,914 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 16:22:41] 2025-10-11 20:22:40,920 [wrapper] pilotpid: 31728
[2025-10-11 16:22:41] 2025-10-11 20:22:40,925 [wrapper] Pilot exit status: 0
[2025-10-11 16:22:41] 2025-10-11 20:22:40,943 [wrapper] pandaids: 6838451542
[2025-10-11 16:22:41] 2025-10-11 20:22:41,005 [wrapper] cleanup supervisor_pilot  9152 31729
[2025-10-11 16:22:41] 2025-10-11 20:22:41,010 [wrapper] Test setup, not cleaning
[2025-10-11 16:22:41] 2025-10-11 20:22:41,015 [wrapper] apfmon messages muted
[2025-10-11 16:22:41] 2025-10-11 20:22:41,020 [wrapper] ==== wrapper stdout END ====
[2025-10-11 16:22:41] 2025-10-11 20:22:41,025 [wrapper] ==== wrapper stderr END ====
[2025-10-11 16:22:41]  *** Error codes and diagnostics ***
[2025-10-11 16:22:41]     "exeErrorCode": 0,
[2025-10-11 16:22:41]     "exeErrorDiag": "",
[2025-10-11 16:22:41]     "pilotErrorCode": 0,
[2025-10-11 16:22:41]     "pilotErrorDiag": "",
[2025-10-11 16:22:41]  *** Listing of results directory ***
[2025-10-11 16:22:41] total 420440
[2025-10-11 16:22:41] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 08:51 pilot3.tar.gz
[2025-10-11 16:22:41] -rwx------ 1 boincer umatlas     36292 Oct 11 09:08 runpilot2-wrapper.sh
[2025-10-11 16:22:41] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 09:08 queuedata.json
[2025-10-11 16:22:41] -rw-r--r-- 1 boincer umatlas       100 Oct 11 14:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 16:22:41] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 14:06 run_atlas
[2025-10-11 16:22:41] -rw-r--r-- 1 boincer umatlas       105 Oct 11 14:06 job.xml
[2025-10-11 16:22:41] -rw-r--r-- 2 boincer umatlas 221216427 Oct 11 14:06 EVNT.46676267._002335.pool.root.1
[2025-10-11 16:22:41] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 14:06 start_atlas.sh
[2025-10-11 16:22:41] drwxrwx--x 2 boincer umatlas      4096 Oct 11 14:06 shared
[2025-10-11 16:22:41] -rw-r--r-- 2 boincer umatlas    569675 Oct 11 14:06 input.tar.gz
[2025-10-11 16:22:41] -rw-r--r-- 1 boincer umatlas         0 Oct 11 14:06 boinc_lockfile
[2025-10-11 16:22:41] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 14:06 pandaJob.out
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas    975520 Oct 11 14:06 agis_schedconf.cvmfs.json
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas   1560580 Oct 11 14:06 agis_ddmendpoints.agis.ALL.json
[2025-10-11 16:22:41] drwx------ 5 boincer umatlas      4096 Oct 11 14:06 pilot3
[2025-10-11 16:22:41] -rw-r--r-- 1 boincer umatlas      5909 Oct 11 16:11 init_data.xml
[2025-10-11 16:22:41] -rw-r--r-- 1 boincer umatlas       529 Oct 11 16:20 boinc_task_state.xml
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas 202415351 Oct 11 16:20 HITS.46676269._058222.pool.root.1
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas      1051 Oct 11 16:21 memory_monitor_summary.json
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas        95 Oct 11 16:21 pilot_heartbeat.json
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas    365368 Oct 11 16:21 log.46676269._058222.job.log.tgz.1
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas      7846 Oct 11 16:21 heartbeat.json
[2025-10-11 16:22:41] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 16:22 boinc_mmap_file
[2025-10-11 16:22:41] -rw-r--r-- 1 boincer umatlas        27 Oct 11 16:22 wrapper_checkpoint.txt
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas      4746 Oct 11 16:22 pilotlog.txt
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas   1135196 Oct 11 16:22 log.46676269._058222.job.log.1
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas       357 Oct 11 16:22 output.list
[2025-10-11 16:22:41] -rw-r--r-- 1 boincer umatlas       620 Oct 11 16:22 runtime_log
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas   1515520 Oct 11 16:22 result.tar.gz
[2025-10-11 16:22:41] -rw-r--r-- 1 boincer umatlas      8698 Oct 11 16:22 runtime_log.err
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas       660 Oct 11 16:22 ksCODm4VoR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqwRMDmtYlu1m.diag
[2025-10-11 16:22:41] -rw-r--r-- 1 boincer umatlas     20838 Oct 11 16:22 stderr.txt
[2025-10-11 16:22:41] HITS file was successfully produced:
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas 202415351 Oct 11 16:20 shared/HITS.pool.root.1
[2025-10-11 16:22:41]  *** Contents of shared directory: ***
[2025-10-11 16:22:41] total 415764
[2025-10-11 16:22:41] -rw-r--r-- 2 boincer umatlas 221216427 Oct 11 14:06 ATLAS.root_0
[2025-10-11 16:22:41] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 14:06 start_atlas.sh
[2025-10-11 16:22:41] -rw-r--r-- 2 boincer umatlas    569675 Oct 11 14:06 input.tar.gz
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas 202415351 Oct 11 16:20 HITS.pool.root.1
[2025-10-11 16:22:41] -rw------- 1 boincer umatlas   1515520 Oct 11 16:22 result.tar.gz
16:22:43 (27907): run_atlas exited; CPU time 58821.556980
16:22:43 (27907): called boinc_finish(0)

</stderr_txt>
]]>

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