Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
10:47:11 (1919271): wrapper (7.7.26015): starting
10:47:11 (1919271): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 10:47:11] Arguments: --nthreads 4
[2025-10-12 10:47:11] Threads: 4
[2025-10-12 10:47:11] Checking for CVMFS
[2025-10-12 10:47:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:47:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:47:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:47:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:47:11] 2.11.3.0 4671 9815 102340 151625 0 57 2262704 4194304 0 130560 0 4410109 99.983 404865 785 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.59.5:3128 1
[2025-10-12 10:47:11] CVMFS is ok
[2025-10-12 10:47:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:47:11] Checking for apptainer binary...
[2025-10-12 10:47:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:47:11] Running /usr/bin/apptainer --version
[2025-10-12 10:47:11] apptainer version 1.4.2-1.fc42
[2025-10-12 10:47:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:47:12] R7OwensSE
[2025-10-12 10:47:12] apptainer works
[2025-10-12 10:47:12] Set ATHENA_PROC_NUMBER=4
[2025-10-12 10:47:12] Set ATHENA_CORE_NUMBER=4
[2025-10-12 10:47:12] Starting ATLAS job with PandaID=6838450832
[2025-10-12 10:47:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:09:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:09:44] 2025-10-12 18:08:57,455 | INFO     | monitor loop #646: job 0:6838450832 is in state 'finished'
[2025-10-12 13:09:44] 2025-10-12 18:08:57,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:09:44] 2025-10-12 18:08:58,854 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 13:09:44] 2025-10-12 18:08:58,857 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3342.3981875
[2025-10-12 13:09:44] 2025-10-12 18:08:58,859 | INFO     | using path: /data/boinc/slots/1/PanDA_Pilot-6838450832/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:09:44] 2025-10-12 18:08:58,859 | INFO     | extracted standard info from prmon json
[2025-10-12 13:09:44] 2025-10-12 18:08:58,859 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:09:44] 2025-10-12 18:08:58,859 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:09:44] 2025-10-12 18:08:58,859 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:09:44] 2025-10-12 18:08:58,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:09:44] 2025-10-12 18:08:58,861 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:09:44] 2025-10-12 18:08:58,861 | INFO     | sum of square deviations: 832722590.0
[2025-10-12 13:09:44] 2025-10-12 18:08:58,862 | INFO     | sum of deviations: -37915365021.000015
[2025-10-12 13:09:44] 2025-10-12 18:08:58,862 | INFO     | mean x: 1760288279.0
[2025-10-12 13:09:44] 2025-10-12 18:08:58,862 | INFO     | mean y: 2497356.633093525
[2025-10-12 13:09:44] 2025-10-12 18:08:58,862 | INFO     | -- intersect: 80151605165.12056
[2025-10-12 13:09:44] 2025-10-12 18:08:58,862 | INFO     | intersect: 80151605165.12056
[2025-10-12 13:09:44] 2025-10-12 18:08:58,862 | INFO     | chi2: 1.5869942628774008
[2025-10-12 13:09:44] 2025-10-12 18:08:58,862 | INFO     | sum of square deviations: 746051197.5
[2025-10-12 13:09:44] 2025-10-12 18:08:58,862 | INFO     | sum of deviations: -35029600658.5
[2025-10-12 13:09:44] 2025-10-12 18:08:58,863 | INFO     | mean x: 1760288126.5
[2025-10-12 13:09:44] 2025-10-12 18:08:58,863 | INFO     | mean y: 2502436.380597015
[2025-10-12 13:09:44] 2025-10-12 18:08:58,863 | INFO     | -- intersect: 82653921429.90634
[2025-10-12 13:09:44] 2025-10-12 18:08:58,863 | INFO     | intersect: 82653921429.90634
[2025-10-12 13:09:44] 2025-10-12 18:08:58,863 | INFO     | chi2: 1.5803426425938603
[2025-10-12 13:09:44] 2025-10-12 18:08:58,863 | INFO     | current chi2=1.5803426425938603 (change=0.4191332280861779 %)
[2025-10-12 13:09:44] 2025-10-12 18:08:58,863 | INFO     | right removable region: 133
[2025-10-12 13:09:44] 2025-10-12 18:08:58,863 | INFO     | sum of square deviations: 746051197.5
[2025-10-12 13:09:44] 2025-10-12 18:08:58,863 | INFO     | sum of deviations: -53061999972.00001
[2025-10-12 13:09:44] 2025-10-12 18:08:58,864 | INFO     | mean x: 1760288431.5
[2025-10-12 13:09:44] 2025-10-12 18:08:58,864 | INFO     | mean y: 2523314.850746269
[2025-10-12 13:09:44] 2025-10-12 18:08:58,864 | INFO     | -- intersect: 125200934651.7147
[2025-10-12 13:09:44] 2025-10-12 18:08:58,864 | INFO     | intersect: 125200934651.7147
[2025-10-12 13:09:44] 2025-10-12 18:08:58,864 | INFO     | chi2: 0.25359414214285225
[2025-10-12 13:09:44] 2025-10-12 18:08:58,864 | INFO     | current chi2=0.25359414214285225 (change=84.02047517909375 %)
[2025-10-12 13:09:44] 2025-10-12 18:08:58,864 | INFO     | sum of square deviations: 665612480.0
[2025-10-12 13:09:44] 2025-10-12 18:08:58,864 | INFO     | sum of deviations: -48604611510.00001
[2025-10-12 13:09:44] 2025-10-12 18:08:58,864 | INFO     | mean x: 1760288584.0
[2025-10-12 13:09:44] 2025-10-12 18:08:58,865 | INFO     | mean y: 2514852.8294573645
[2025-10-12 13:09:44] 2025-10-12 18:08:58,865 | INFO     | -- intersect: 128542987487.6094
[2025-10-12 13:09:44] 2025-10-12 18:08:58,865 | INFO     | intersect: 128542987487.6094
[2025-10-12 13:09:44] 2025-10-12 18:08:58,865 | INFO     | chi2: 0.2512525820224615
[2025-10-12 13:09:44] 2025-10-12 18:08:58,865 | INFO     | current chi2=0.2512525820224615 (change=0.9233494514521348 %)
[2025-10-12 13:09:44] 2025-10-12 18:08:58,865 | INFO     | left removable region: 20
[2025-10-12 13:09:44] 2025-10-12 18:08:58,865 | INFO     | sum of square deviations: 447383272.0
[2025-10-12 13:09:44] 2025-10-12 18:08:58,865 | INFO     | sum of deviations: -35634896735.00001
[2025-10-12 13:09:44] 2025-10-12 18:08:58,865 | INFO     | mean x: 1760288706.0
[2025-10-12 13:09:44] 2025-10-12 18:08:58,865 | INFO     | mean y: 2500267.5398230087
[2025-10-12 13:09:44] 2025-10-12 18:08:58,866 | INFO     | -- intersect: 140212718637.2977
[2025-10-12 13:09:44] 2025-10-12 18:08:58,866 | INFO     | intersect: 140212718637.2977
[2025-10-12 13:09:44] 2025-10-12 18:08:58,866 | INFO     | chi2: 0.23355365524399868
[2025-10-12 13:09:44] 2025-10-12 18:08:58,866 | INFO     | -- intersect: 140212718637.2977
[2025-10-12 13:09:44] 2025-10-12 18:08:58,866 | INFO     | current memory leak: -79.65 B/s (using 113 data points, chi2=0.23)
[2025-10-12 13:09:44] 2025-10-12 18:08:58,866 | INFO     | could have reported an average CPU frequency of 3416 MHz (8 samples)
[2025-10-12 13:09:44] 2025-10-12 18:08:58,866 | INFO     | ..............................
[2025-10-12 13:09:44] 2025-10-12 18:08:58,866 | INFO     | . Timing measurements:
[2025-10-12 13:09:44] 2025-10-12 18:08:58,866 | INFO     | . get job = 0 s
[2025-10-12 13:09:44] 2025-10-12 18:08:58,866 | INFO     | . initial setup = 3 s
[2025-10-12 13:09:44] 2025-10-12 18:08:58,866 | INFO     | . payload setup = 6 s
[2025-10-12 13:09:44] 2025-10-12 18:08:58,866 | INFO     | . stage-in = 0 s
[2025-10-12 13:09:44] 2025-10-12 18:08:58,866 | INFO     | . payload execution = 8460 s
[2025-10-12 13:09:44] 2025-10-12 18:08:58,867 | INFO     | . stage-out = 0 s
[2025-10-12 13:09:44] 2025-10-12 18:08:58,867 | INFO     | . log creation = 0 s
[2025-10-12 13:09:44] 2025-10-12 18:08:58,867 | INFO     | ..............................
[2025-10-12 13:09:44] 2025-10-12 18:08:59,018 | INFO     | time since job start (8495s) is within the limit (172800.0s)
[2025-10-12 13:09:44] 2025-10-12 18:08:59,396 | INFO     | 
[2025-10-12 13:09:44] 2025-10-12 18:08:59,396 | INFO     | job summary report
[2025-10-12 13:09:44] 2025-10-12 18:08:59,397 | INFO     | --------------------------------------------------
[2025-10-12 13:09:44] 2025-10-12 18:08:59,397 | INFO     | PanDA job id: 6838450832
[2025-10-12 13:09:44] 2025-10-12 18:08:59,397 | INFO     | task id: 46676269
[2025-10-12 13:09:44] 2025-10-12 18:08:59,397 | INFO     | errors: (none)
[2025-10-12 13:09:44] 2025-10-12 18:08:59,397 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:09:44] 2025-10-12 18:08:59,397 | INFO     | pilot state: finished 
[2025-10-12 13:09:44] 2025-10-12 18:08:59,397 | INFO     | transexitcode: 0
[2025-10-12 13:09:44] 2025-10-12 18:08:59,397 | INFO     | exeerrorcode: 0
[2025-10-12 13:09:44] 2025-10-12 18:08:59,397 | INFO     | exeerrordiag: 
[2025-10-12 13:09:44] 2025-10-12 18:08:59,397 | INFO     | exitcode: 0
[2025-10-12 13:09:44] 2025-10-12 18:08:59,397 | INFO     | exitmsg: OK
[2025-10-12 13:09:44] 2025-10-12 18:08:59,397 | INFO     | cpuconsumptiontime: 32493 s
[2025-10-12 13:09:44] 2025-10-12 18:08:59,397 | INFO     | nevents: 400
[2025-10-12 13:09:44] 2025-10-12 18:08:59,397 | INFO     | neventsw: 0
[2025-10-12 13:09:44] 2025-10-12 18:08:59,398 | INFO     | pid: 1929588
[2025-10-12 13:09:44] 2025-10-12 18:08:59,398 | INFO     | pgrp: 1929588
[2025-10-12 13:09:44] 2025-10-12 18:08:59,398 | INFO     | corecount: 4
[2025-10-12 13:09:44] 2025-10-12 18:08:59,398 | INFO     | event service: False
[2025-10-12 13:09:44] 2025-10-12 18:08:59,398 | INFO     | sizes: {0: 2348626, 1: 2348881, 5: 2349143, 12: 2349199, 8470: 2377223, 8471: 2386215, 8474: 2386399, 8479: 2386593}
[2025-10-12 13:09:44] 2025-10-12 18:08:59,398 | INFO     | --------------------------------------------------
[2025-10-12 13:09:44] 2025-10-12 18:08:59,398 | INFO     | 
[2025-10-12 13:09:44] 2025-10-12 18:08:59,398 | INFO     | executing command: ls -lF /data/boinc/slots/1
[2025-10-12 13:09:44] 2025-10-12 18:08:59,421 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,421 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,422 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,422 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,422 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,422 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,422 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,422 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,422 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,422 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,422 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,422 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,422 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,423 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:09:44] 2025-10-12 18:08:59,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,423 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:09:44] 2025-10-12 18:08:59,423 | INFO     | job 6838450832 has completed (purged errors)
[2025-10-12 13:09:44] 2025-10-12 18:08:59,423 | INFO     | overall cleanup function is called
[2025-10-12 13:09:44] 2025-10-12 18:09:00,429 | INFO     | --- collectZombieJob: --- 10, [1929588]
[2025-10-12 13:09:44] 2025-10-12 18:09:00,430 | INFO     | zombie collector waiting for pid 1929588
[2025-10-12 13:09:44] 2025-10-12 18:09:00,430 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:09:44] 2025-10-12 18:09:00,430 | INFO     | collected zombie processes
[2025-10-12 13:09:44] 2025-10-12 18:09:00,430 | INFO     | will attempt to kill all subprocesses of pid=1929588
[2025-10-12 13:09:44] 2025-10-12 18:09:00,510 | INFO     | process IDs to be killed: [1929588] (in reverse order)
[2025-10-12 13:09:44] 2025-10-12 18:09:00,557 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:09:44] 2025-10-12 18:09:00,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:09:44] 2025-10-12 18:09:00,560 | INFO     | did not find any defunct processes belonging to 1929588
[2025-10-12 13:09:44] 2025-10-12 18:09:00,562 | INFO     | did not find any defunct processes belonging to 1929588
[2025-10-12 13:09:44] 2025-10-12 18:09:00,563 | INFO     | ready for new job
[2025-10-12 13:09:44] 2025-10-12 18:09:00,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:09:44] 2025-10-12 18:09:00,564 | INFO     | ***************************************
[2025-10-12 13:09:44] 2025-10-12 18:09:00,564 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:09:44] 2025-10-12 18:09:00,564 | INFO     | ***************************************
[2025-10-12 13:09:44] 2025-10-12 18:09:00,564 | INFO     | 
[2025-10-12 13:09:44] 2025-10-12 18:09:00,565 | INFO     | architecture information:
[2025-10-12 13:09:44] 2025-10-12 18:09:00,565 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:09:44] 2025-10-12 18:09:00,580 | INFO     | cat /etc/os-release:
[2025-10-12 13:09:44] NAME="CentOS Linux"
[2025-10-12 13:09:44] VERSION="7 (Core)"
[2025-10-12 13:09:44] ID="centos"
[2025-10-12 13:09:44] ID_LIKE="rhel fedora"
[2025-10-12 13:09:44] VERSION_ID="7"
[2025-10-12 13:09:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:09:44] ANSI_COLOR="0;31"
[2025-10-12 13:09:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:09:44] HOME_URL="https://www.centos.org/"
[2025-10-12 13:09:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:09:44] 
[2025-10-12 13:09:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:09:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:09:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:09:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:09:44] 
[2025-10-12 13:09:44] 2025-10-12 18:09:00,580 | INFO     | ***************************************
[2025-10-12 13:09:44] 2025-10-12 18:09:01,083 | INFO     | executing command: df -mP /data/boinc/slots/1
[2025-10-12 13:09:44] 2025-10-12 18:09:01,100 | INFO     | sufficient remaining disk space (407178838016 B)
[2025-10-12 13:09:44] 2025-10-12 18:09:01,100 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:09:44] 2025-10-12 18:09:01,100 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:09:44] 2025-10-12 18:09:01,100 | INFO     | update_server=False
[2025-10-12 13:09:44] 2025-10-12 18:09:01,100 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:09:44] 2025-10-12 18:09:01,100 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:09:44] 2025-10-12 18:09:01,101 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:09:44] 2025-10-12 18:09:01,101 | INFO     | aborting loop
[2025-10-12 13:09:44] 2025-10-12 18:09:01,604 | INFO     | all data control threads have been joined
[2025-10-12 13:09:44] 2025-10-12 18:09:01,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:09:44] 2025-10-12 18:09:01,896 | INFO     | all payload control threads have been joined
[2025-10-12 13:09:44] 2025-10-12 18:09:02,105 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:02,105 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:02,146 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:02,299 | INFO     | all job control threads have been joined
[2025-10-12 13:09:44] 2025-10-12 18:09:02,610 | INFO     | [data] control thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:02,662 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:02,901 | INFO     | [payload] control thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:03,303 | INFO     | [job] control thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:03,330 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:03,396 | INFO     | [job] validate thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:03,522 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:03,596 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:03,634 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:03,677 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:03,944 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:09:44] 2025-10-12 18:09:04,950 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:05,105 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:11,291 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:09:44] 2025-10-12 18:09:12,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:09:44] 2025-10-12 18:09:32,180 | INFO     | PID=1923057 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:09:44] 2025-10-12 18:09:32,180 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:09:44] 2025-10-12 18:09:32,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:09:44] 2025-10-12 18:09:32,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:09:44] 2025-10-12 18:09:37,605 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:09:44] 2025-10-12 18:09:39,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140046730757952)>', '<ExcThread(monitor, started 140046225090304)>']
[2025-10-12 13:09:44] 2025-10-12 18:09:40,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:09:44] 2025-10-12 18:09:40,220 | INFO     | [monitor] control thread has ended
[2025-10-12 13:09:44] 2025-10-12 18:09:44,700 | INFO     | all workflow threads have been joined
[2025-10-12 13:09:44] 2025-10-12 18:09:44,700 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:09:44] 2025-10-12 18:09:44,700 | INFO     | traces error code: 0
[2025-10-12 13:09:44] 2025-10-12 18:09:44,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:09:44] 2025-10-12 18:09:44,829 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:09:44] 2025-10-12 18:09:44,831 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:09:44] 2025-10-12 18:09:44,833 [wrapper] pilotpid: 1923057
[2025-10-12 13:09:44] 2025-10-12 18:09:44,837 [wrapper] Pilot exit status: 0
[2025-10-12 13:09:44] 2025-10-12 18:09:44,844 [wrapper] pandaids: 6838450832
[2025-10-12 13:09:44] 2025-10-12 18:09:44,869 [wrapper] cleanup supervisor_pilot 1949233 1923058
[2025-10-12 13:09:44] 2025-10-12 18:09:44,871 [wrapper] Test setup, not cleaning
[2025-10-12 13:09:44] 2025-10-12 18:09:44,873 [wrapper] apfmon messages muted
[2025-10-12 13:09:44] 2025-10-12 18:09:44,875 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:09:44] 2025-10-12 18:09:44,877 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:09:44]  *** Error codes and diagnostics ***
[2025-10-12 13:09:44]     "exeErrorCode": 0,
[2025-10-12 13:09:44]     "exeErrorDiag": "",
[2025-10-12 13:09:44]     "pilotErrorCode": 0,
[2025-10-12 13:09:44]     "pilotErrorDiag": "",
[2025-10-12 13:09:44]  *** Listing of results directory ***
[2025-10-12 13:09:44] total 411792
[2025-10-12 13:09:44] -rw-r--r-- 1 boinc boinc    557409 Oct 11 07:28 pilot3.tar.gz
[2025-10-12 13:09:44] -rwx------ 1 boinc boinc     36292 Oct 11 07:40 runpilot2-wrapper.sh
[2025-10-12 13:09:44] -rw-r--r-- 1 boinc boinc      5112 Oct 11 07:40 queuedata.json
[2025-10-12 13:09:44] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:09:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:47 run_atlas
[2025-10-12 13:09:44] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:47 job.xml
[2025-10-12 13:09:44] -rw-r--r-- 2 boinc boinc 221934459 Oct 12 10:47 EVNT.46676267._002317.pool.root.1
[2025-10-12 13:09:44] -rw-r--r-- 1 boinc boinc      9535 Oct 12 10:47 init_data.xml
[2025-10-12 13:09:44] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:47 shared
[2025-10-12 13:09:44] -rw-r--r-- 2 boinc boinc    569677 Oct 12 10:47 input.tar.gz
[2025-10-12 13:09:44] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:47 start_atlas.sh
[2025-10-12 13:09:44] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:47 boinc_lockfile
[2025-10-12 13:09:44] -rw-r--r-- 1 boinc boinc      2549 Oct 12 10:47 pandaJob.out
[2025-10-12 13:09:44] -rw------- 1 boinc boinc    975528 Oct 12 10:47 agis_schedconf.cvmfs.json
[2025-10-12 13:09:44] -rw------- 1 boinc boinc   1560580 Oct 12 10:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:09:44] drwx------ 5 boinc boinc      4096 Oct 12 10:47 pilot3
[2025-10-12 13:09:44] -rw------- 1 boinc boinc 192793287 Oct 12 13:08 HITS.46676269._057779.pool.root.1
[2025-10-12 13:09:44] -rw------- 1 boinc boinc        95 Oct 12 13:08 pilot_heartbeat.json
[2025-10-12 13:09:44] -rw------- 1 boinc boinc      1015 Oct 12 13:08 memory_monitor_summary.json
[2025-10-12 13:09:44] -rw-r--r-- 1 boinc boinc       529 Oct 12 13:08 boinc_task_state.xml
[2025-10-12 13:09:44] -rw------- 1 boinc boinc    316369 Oct 12 13:08 log.46676269._057779.job.log.tgz.1
[2025-10-12 13:09:44] -rw------- 1 boinc boinc      7747 Oct 12 13:08 heartbeat.json
[2025-10-12 13:09:44] -rw-r--r-- 1 boinc boinc        27 Oct 12 13:09 wrapper_checkpoint.txt
[2025-10-12 13:09:44] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:09 boinc_mmap_file
[2025-10-12 13:09:44] -rw------- 1 boinc boinc      4818 Oct 12 13:09 pilotlog.txt
[2025-10-12 13:09:44] -rw------- 1 boinc boinc   1205615 Oct 12 13:09 log.46676269._057779.job.log.1
[2025-10-12 13:09:44] -rw------- 1 boinc boinc       357 Oct 12 13:09 output.list
[2025-10-12 13:09:44] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:09 runtime_log
[2025-10-12 13:09:44] -rw------- 1 boinc boinc   1536000 Oct 12 13:09 result.tar.gz
[2025-10-12 13:09:44] -rw------- 1 boinc boinc       643 Oct 12 13:09 1FdNDmB5nR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0RgNDm3zKFTo.diag
[2025-10-12 13:09:44] -rw-r--r-- 1 boinc boinc      8622 Oct 12 13:09 runtime_log.err
[2025-10-12 13:09:44] -rw-r--r-- 1 boinc boinc     20780 Oct 12 13:09 stderr.txt
[2025-10-12 13:09:44] HITS file was successfully produced:
[2025-10-12 13:09:44] -rw------- 1 boinc boinc 192793287 Oct 12 13:08 shared/HITS.pool.root.1
[2025-10-12 13:09:44]  *** Contents of shared directory: ***
[2025-10-12 13:09:44] total 407092
[2025-10-12 13:09:44] -rw-r--r-- 2 boinc boinc 221934459 Oct 12 10:47 ATLAS.root_0
[2025-10-12 13:09:44] -rw-r--r-- 2 boinc boinc    569677 Oct 12 10:47 input.tar.gz
[2025-10-12 13:09:44] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:47 start_atlas.sh
[2025-10-12 13:09:44] -rw------- 1 boinc boinc 192793287 Oct 12 13:08 HITS.pool.root.1
[2025-10-12 13:09:44] -rw------- 1 boinc boinc   1536000 Oct 12 13:09 result.tar.gz
13:09:46 (1919271): run_atlas exited; CPU time 32565.147871
13:09:46 (1919271): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN