Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
18:04:15 (1694336): wrapper (7.7.26015): starting
18:04:15 (1694336): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 18:04:15] Arguments: --nthreads 4
[2025-10-11 18:04:15] Threads: 4
[2025-10-11 18:04:15] Checking for CVMFS
[2025-10-11 18:04:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:04:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:04:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:04:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:04:16] 2.11.3.0 4671 8812 99360 151599 1 57 2146023 4194304 0 130560 0 3874860 99.983 369028 798 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.59.5:3128 1
[2025-10-11 18:04:16] CVMFS is ok
[2025-10-11 18:04:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:04:16] Checking for apptainer binary...
[2025-10-11 18:04:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:04:16] Running /usr/bin/apptainer --version
[2025-10-11 18:04:16] apptainer version 1.4.2-1.fc42
[2025-10-11 18:04:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:04:16] R7OwensSE
[2025-10-11 18:04:16] apptainer works
[2025-10-11 18:04:16] Set ATHENA_PROC_NUMBER=4
[2025-10-11 18:04:16] Set ATHENA_CORE_NUMBER=4
[2025-10-11 18:04:16] Starting ATLAS job with PandaID=6838366462
[2025-10-11 18:04:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:29:49]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:29:49] 2025-10-12 01:28:52,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:29:49] 2025-10-12 01:28:52,055 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:29:49] 2025-10-12 01:28:52,055 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:29:49] 2025-10-12 01:28:52,057 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:29:49] 2025-10-12 01:28:52,057 | INFO     | sum of square deviations: 887813855.5
[2025-10-11 20:29:49] 2025-10-12 01:28:52,058 | INFO     | sum of deviations: 8017052703.499999
[2025-10-11 20:29:49] 2025-10-12 01:28:52,058 | INFO     | mean x: 1760228196.5
[2025-10-11 20:29:49] 2025-10-12 01:28:52,058 | INFO     | mean y: 2353108.1901408453
[2025-10-11 20:29:49] 2025-10-12 01:28:52,058 | INFO     | -- intersect: -15892693059.544792
[2025-10-11 20:29:49] 2025-10-12 01:28:52,058 | INFO     | intersect: -15892693059.544792
[2025-10-11 20:29:49] 2025-10-12 01:28:52,059 | INFO     | chi2: 1.3356090179021098
[2025-10-11 20:29:49] 2025-10-12 01:28:52,059 | INFO     | sum of square deviations: 797291228.0
[2025-10-11 20:29:49] 2025-10-12 01:28:52,059 | INFO     | sum of deviations: 7356752682.999995
[2025-10-11 20:29:49] 2025-10-12 01:28:52,060 | INFO     | mean x: 1760228044.0
[2025-10-11 20:29:49] 2025-10-12 01:28:52,060 | INFO     | mean y: 2352018.3576642335
[2025-10-11 20:29:49] 2025-10-12 01:28:52,060 | INFO     | -- intersect: -16239595629.646353
[2025-10-11 20:29:49] 2025-10-12 01:28:52,060 | INFO     | intersect: -16239595629.646353
[2025-10-11 20:29:49] 2025-10-12 01:28:52,060 | INFO     | chi2: 1.334421045194904
[2025-10-11 20:29:49] 2025-10-12 01:28:52,060 | INFO     | current chi2=1.334421045194904 (change=0.08894614301660934 %)
[2025-10-11 20:29:49] 2025-10-12 01:28:52,060 | INFO     | right removable region: 136
[2025-10-11 20:29:49] 2025-10-12 01:28:52,060 | INFO     | sum of square deviations: 797291228.0
[2025-10-11 20:29:49] 2025-10-12 01:28:52,061 | INFO     | sum of deviations: -4457999926.0
[2025-10-11 20:29:49] 2025-10-12 01:28:52,061 | INFO     | mean x: 1760228349.0
[2025-10-11 20:29:49] 2025-10-12 01:28:52,061 | INFO     | mean y: 2373456.6496350365
[2025-10-11 20:29:49] 2025-10-12 01:28:52,061 | INFO     | -- intersect: 9844571105.392738
[2025-10-11 20:29:49] 2025-10-12 01:28:52,061 | INFO     | intersect: 9844571105.392738
[2025-10-11 20:29:49] 2025-10-12 01:28:52,062 | INFO     | chi2: 0.09615696437430331
[2025-10-11 20:29:49] 2025-10-12 01:28:52,062 | INFO     | current chi2=0.09615696437430331 (change=92.80051548878126 %)
[2025-10-11 20:29:49] 2025-10-12 01:28:52,062 | INFO     | sum of square deviations: 713140813.0
[2025-10-11 20:29:49] 2025-10-12 01:28:52,062 | INFO     | sum of deviations: 1487605505.4999998
[2025-10-11 20:29:49] 2025-10-12 01:28:52,062 | INFO     | mean x: 1760228501.5
[2025-10-11 20:29:49] 2025-10-12 01:28:52,063 | INFO     | mean y: 2362766.0984848486
[2025-10-11 20:29:49] 2025-10-12 01:28:52,063 | INFO     | -- intersect: -3669458509.638001
[2025-10-11 20:29:49] 2025-10-12 01:28:52,063 | INFO     | intersect: -3669458509.638001
[2025-10-11 20:29:49] 2025-10-12 01:28:52,063 | INFO     | chi2: 0.002967118036221004
[2025-10-11 20:29:49] 2025-10-12 01:28:52,063 | INFO     | current chi2=0.002967118036221004 (change=96.91429731010318 %)
[2025-10-11 20:29:49] 2025-10-12 01:28:52,063 | INFO     | sum of square deviations: 635130048.0
[2025-10-11 20:29:49] 2025-10-12 01:28:52,064 | INFO     | sum of deviations: 968249767.0000002
[2025-10-11 20:29:49] 2025-10-12 01:28:52,064 | INFO     | mean x: 1760228654.0
[2025-10-11 20:29:49] 2025-10-12 01:28:52,064 | INFO     | mean y: 2363776.307086614
[2025-10-11 20:29:49] 2025-10-12 01:28:52,064 | INFO     | -- intersect: -2681088202.494937
[2025-10-11 20:29:49] 2025-10-12 01:28:52,064 | INFO     | intersect: -2681088202.494937
[2025-10-11 20:29:49] 2025-10-12 01:28:52,064 | INFO     | chi2: 0.002603975848448535
[2025-10-11 20:29:49] 2025-10-12 01:28:52,064 | INFO     | current chi2=0.002603975848448535 (change=12.23888579218695 %)
[2025-10-11 20:29:49] 2025-10-12 01:28:52,064 | INFO     | left removable region: 30
[2025-10-11 20:29:49] 2025-10-12 01:28:52,065 | INFO     | sum of square deviations: 369281342.5
[2025-10-11 20:29:49] 2025-10-12 01:28:52,065 | INFO     | sum of deviations: 37898964.50000001
[2025-10-11 20:29:49] 2025-10-12 01:28:52,065 | INFO     | mean x: 1760228928.5
[2025-10-11 20:29:49] 2025-10-12 01:28:52,065 | INFO     | mean y: 2364413.896226415
[2025-10-11 20:29:49] 2025-10-12 01:28:52,065 | INFO     | -- intersect: -178286071.23651367
[2025-10-11 20:29:49] 2025-10-12 01:28:52,065 | INFO     | intersect: -178286071.23651367
[2025-10-11 20:29:49] 2025-10-12 01:28:52,065 | INFO     | chi2: 0.0004296291102187901
[2025-10-11 20:29:49] 2025-10-12 01:28:52,066 | INFO     | -- intersect: -178286071.23651367
[2025-10-11 20:29:49] 2025-10-12 01:28:52,066 | INFO     | current memory leak: 0.10 B/s (using 106 data points, chi2=0.00)
[2025-10-11 20:29:49] 2025-10-12 01:28:52,066 | INFO     | could have reported an average CPU frequency of 3462 MHz (8 samples)
[2025-10-11 20:29:49] 2025-10-12 01:28:52,066 | INFO     | ..............................
[2025-10-11 20:29:49] 2025-10-12 01:28:52,066 | INFO     | . Timing measurements:
[2025-10-11 20:29:49] 2025-10-12 01:28:52,066 | INFO     | . get job = 0 s
[2025-10-11 20:29:49] 2025-10-12 01:28:52,067 | INFO     | . initial setup = 3 s
[2025-10-11 20:29:49] 2025-10-12 01:28:52,067 | INFO     | . payload setup = 6 s
[2025-10-11 20:29:49] 2025-10-12 01:28:52,067 | INFO     | . stage-in = 0 s
[2025-10-11 20:29:49] 2025-10-12 01:28:52,067 | INFO     | . payload execution = 8627 s
[2025-10-11 20:29:49] 2025-10-12 01:28:52,067 | INFO     | . stage-out = 0 s
[2025-10-11 20:29:49] 2025-10-12 01:28:52,067 | INFO     | . log creation = 0 s
[2025-10-11 20:29:49] 2025-10-12 01:28:52,067 | INFO     | ..............................
[2025-10-11 20:29:49] 2025-10-12 01:28:52,155 | INFO     | 
[2025-10-11 20:29:49] 2025-10-12 01:28:52,155 | INFO     | job summary report
[2025-10-11 20:29:49] 2025-10-12 01:28:52,156 | INFO     | --------------------------------------------------
[2025-10-11 20:29:49] 2025-10-12 01:28:52,156 | INFO     | PanDA job id: 6838366462
[2025-10-11 20:29:49] 2025-10-12 01:28:52,156 | INFO     | task id: 46676269
[2025-10-11 20:29:49] 2025-10-12 01:28:52,156 | INFO     | errors: (none)
[2025-10-11 20:29:49] 2025-10-12 01:28:52,156 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:29:49] 2025-10-12 01:28:52,156 | INFO     | pilot state: finished 
[2025-10-11 20:29:49] 2025-10-12 01:28:52,156 | INFO     | transexitcode: 0
[2025-10-11 20:29:49] 2025-10-12 01:28:52,156 | INFO     | exeerrorcode: 0
[2025-10-11 20:29:49] 2025-10-12 01:28:52,156 | INFO     | exeerrordiag: 
[2025-10-11 20:29:49] 2025-10-12 01:28:52,156 | INFO     | exitcode: 0
[2025-10-11 20:29:49] 2025-10-12 01:28:52,156 | INFO     | exitmsg: OK
[2025-10-11 20:29:49] 2025-10-12 01:28:52,156 | INFO     | cpuconsumptiontime: 33251 s
[2025-10-11 20:29:49] 2025-10-12 01:28:52,157 | INFO     | nevents: 400
[2025-10-11 20:29:49] 2025-10-12 01:28:52,157 | INFO     | neventsw: 0
[2025-10-11 20:29:49] 2025-10-12 01:28:52,157 | INFO     | pid: 1704666
[2025-10-11 20:29:49] 2025-10-12 01:28:52,157 | INFO     | pgrp: 1704666
[2025-10-11 20:29:49] 2025-10-12 01:28:52,157 | INFO     | corecount: 4
[2025-10-11 20:29:49] 2025-10-12 01:28:52,157 | INFO     | event service: False
[2025-10-11 20:29:49] 2025-10-12 01:28:52,157 | INFO     | sizes: {0: 2348854, 1: 2348882, 5: 2349144, 11: 2349200, 8637: 2377100, 8639: 2386092, 8641: 2386276, 8646: 2386470}
[2025-10-11 20:29:49] 2025-10-12 01:28:52,157 | INFO     | --------------------------------------------------
[2025-10-11 20:29:49] 2025-10-12 01:28:52,157 | INFO     | 
[2025-10-11 20:29:49] 2025-10-12 01:28:52,157 | INFO     | executing command: ls -lF /data/boinc/slots/5
[2025-10-11 20:29:49] 2025-10-12 01:28:52,182 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,182 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,182 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,182 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,182 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,183 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:29:49] 2025-10-12 01:28:52,184 | INFO     | job 6838366462 has completed (purged errors)
[2025-10-11 20:29:49] 2025-10-12 01:28:52,184 | INFO     | overall cleanup function is called
[2025-10-11 20:29:49] 2025-10-12 01:28:53,190 | INFO     | --- collectZombieJob: --- 10, [1704666]
[2025-10-11 20:29:49] 2025-10-12 01:28:53,190 | INFO     | zombie collector waiting for pid 1704666
[2025-10-11 20:29:49] 2025-10-12 01:28:53,190 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:29:49] 2025-10-12 01:28:53,190 | INFO     | collected zombie processes
[2025-10-11 20:29:49] 2025-10-12 01:28:53,190 | INFO     | will attempt to kill all subprocesses of pid=1704666
[2025-10-11 20:29:49] 2025-10-12 01:28:53,287 | INFO     | process IDs to be killed: [1704666] (in reverse order)
[2025-10-11 20:29:49] 2025-10-12 01:28:53,359 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:29:49] 2025-10-12 01:28:53,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:29:49] 2025-10-12 01:28:53,362 | INFO     | did not find any defunct processes belonging to 1704666
[2025-10-11 20:29:49] 2025-10-12 01:28:53,365 | INFO     | did not find any defunct processes belonging to 1704666
[2025-10-11 20:29:49] 2025-10-12 01:28:53,366 | INFO     | ready for new job
[2025-10-11 20:29:49] 2025-10-12 01:28:53,366 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:29:49] 2025-10-12 01:28:53,367 | INFO     | ***************************************
[2025-10-11 20:29:49] 2025-10-12 01:28:53,367 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:29:49] 2025-10-12 01:28:53,368 | INFO     | ***************************************
[2025-10-11 20:29:49] 2025-10-12 01:28:53,368 | INFO     | 
[2025-10-11 20:29:49] 2025-10-12 01:28:53,369 | INFO     | architecture information:
[2025-10-11 20:29:49] 2025-10-12 01:28:53,369 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:29:49] 2025-10-12 01:28:53,386 | INFO     | cat /etc/os-release:
[2025-10-11 20:29:49] NAME="CentOS Linux"
[2025-10-11 20:29:49] VERSION="7 (Core)"
[2025-10-11 20:29:49] ID="centos"
[2025-10-11 20:29:49] ID_LIKE="rhel fedora"
[2025-10-11 20:29:49] VERSION_ID="7"
[2025-10-11 20:29:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:29:49] ANSI_COLOR="0;31"
[2025-10-11 20:29:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:29:49] HOME_URL="https://www.centos.org/"
[2025-10-11 20:29:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:29:49] 
[2025-10-11 20:29:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:29:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:29:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:29:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:29:49] 
[2025-10-11 20:29:49] 2025-10-12 01:28:53,386 | INFO     | ***************************************
[2025-10-11 20:29:49] 2025-10-12 01:28:53,889 | INFO     | executing command: df -mP /data/boinc/slots/5
[2025-10-11 20:29:49] 2025-10-12 01:28:53,914 | INFO     | sufficient remaining disk space (406669230080 B)
[2025-10-11 20:29:49] 2025-10-12 01:28:53,914 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:29:49] 2025-10-12 01:28:53,914 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:29:49] 2025-10-12 01:28:53,914 | INFO     | update_server=False
[2025-10-11 20:29:49] 2025-10-12 01:28:53,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:29:49] 2025-10-12 01:28:53,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:29:49] 2025-10-12 01:28:53,916 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:29:49] 2025-10-12 01:28:53,916 | INFO     | aborting loop
[2025-10-11 20:29:49] 2025-10-12 01:28:53,980 | INFO     | all data control threads have been joined
[2025-10-11 20:29:49] 2025-10-12 01:28:54,730 | INFO     | all payload control threads have been joined
[2025-10-11 20:29:49] 2025-10-12 01:28:54,920 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:28:54,920 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:28:54,921 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:28:54,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:29:49] 2025-10-12 01:28:54,986 | INFO     | [data] control thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:28:55,023 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:28:55,111 | INFO     | all job control threads have been joined
[2025-10-11 20:29:49] 2025-10-12 01:28:55,621 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:28:55,735 | INFO     | [payload] control thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:28:55,746 | INFO     | [job] validate thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:28:56,008 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:28:56,019 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:28:56,116 | INFO     | [job] control thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:28:56,129 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:28:56,514 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:28:56,988 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:28:57,154 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:29:49] 2025-10-12 01:29:01,159 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:29:04,727 | INFO     | job.realtimelogging is not enabled
[2025-10-11 20:29:49] 2025-10-12 01:29:05,732 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:29:49] 2025-10-12 01:29:24,376 | INFO     | PID=1698133 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 20:29:49] 2025-10-12 01:29:24,376 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:29:49] 2025-10-12 01:29:24,376 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:29:49] 2025-10-12 01:29:24,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:29:49] 2025-10-12 01:29:43,638 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:29:49] 2025-10-12 01:29:44,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140680619849536)>', '<ExcThread(monitor, started 140679908947712)>']
[2025-10-11 20:29:49] 2025-10-12 01:29:45,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:29:49] 2025-10-12 01:29:45,481 | INFO     | [monitor] control thread has ended
[2025-10-11 20:29:49] 2025-10-12 01:29:49,685 | INFO     | all workflow threads have been joined
[2025-10-11 20:29:49] 2025-10-12 01:29:49,685 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:29:49] 2025-10-12 01:29:49,686 | INFO     | traces error code: 0
[2025-10-11 20:29:49] 2025-10-12 01:29:49,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:29:49] 2025-10-12 01:29:49,818 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:29:49] 2025-10-12 01:29:49,820 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:29:49] 2025-10-12 01:29:49,823 [wrapper] pilotpid: 1698133
[2025-10-11 20:29:49] 2025-10-12 01:29:49,826 [wrapper] Pilot exit status: 0
[2025-10-11 20:29:49] 2025-10-12 01:29:49,844 [wrapper] pandaids: 6838366462
[2025-10-11 20:29:49] 2025-10-12 01:29:49,879 [wrapper] cleanup supervisor_pilot 1723378 1698134
[2025-10-11 20:29:49] 2025-10-12 01:29:49,885 [wrapper] Test setup, not cleaning
[2025-10-11 20:29:49] 2025-10-12 01:29:49,892 [wrapper] apfmon messages muted
[2025-10-11 20:29:49] 2025-10-12 01:29:49,895 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:29:49] 2025-10-12 01:29:49,898 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:29:49]  *** Error codes and diagnostics ***
[2025-10-11 20:29:49]     "exeErrorCode": 0,
[2025-10-11 20:29:49]     "exeErrorDiag": "",
[2025-10-11 20:29:49]     "pilotErrorCode": 0,
[2025-10-11 20:29:49]     "pilotErrorDiag": "",
[2025-10-11 20:29:49]  *** Listing of results directory ***
[2025-10-11 20:29:49] total 408008
[2025-10-11 20:29:49] -rw-r--r-- 1 boinc boinc    557409 Oct 11 06:21 pilot3.tar.gz
[2025-10-11 20:29:49] -rw-r--r-- 1 boinc boinc      5112 Oct 11 06:56 queuedata.json
[2025-10-11 20:29:49] -rwx------ 1 boinc boinc     36292 Oct 11 06:56 runpilot2-wrapper.sh
[2025-10-11 20:29:49] -rw-r--r-- 1 boinc boinc       100 Oct 11 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:29:49] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 18:04 run_atlas
[2025-10-11 20:29:49] -rw-r--r-- 1 boinc boinc       105 Oct 11 18:04 job.xml
[2025-10-11 20:29:49] -rw-r--r-- 2 boinc boinc 220725675 Oct 11 18:04 EVNT.46676267._002302.pool.root.1
[2025-10-11 20:29:49] -rw-r--r-- 1 boinc boinc      9535 Oct 11 18:04 init_data.xml
[2025-10-11 20:29:49] drwxrwx--x 2 boinc boinc      4096 Oct 11 18:04 shared
[2025-10-11 20:29:49] -rw-r--r-- 2 boinc boinc    569682 Oct 11 18:04 input.tar.gz
[2025-10-11 20:29:49] -rw-r--r-- 2 boinc boinc     15120 Oct 11 18:04 start_atlas.sh
[2025-10-11 20:29:49] -rw-r--r-- 1 boinc boinc         0 Oct 11 18:04 boinc_lockfile
[2025-10-11 20:29:49] -rw-r--r-- 1 boinc boinc      2550 Oct 11 18:04 pandaJob.out
[2025-10-11 20:29:49] -rw------- 1 boinc boinc    975520 Oct 11 18:04 agis_schedconf.cvmfs.json
[2025-10-11 20:29:49] -rw------- 1 boinc boinc   1560580 Oct 11 18:04 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:29:49] drwx------ 5 boinc boinc      4096 Oct 11 18:04 pilot3
[2025-10-11 20:29:49] -rw------- 1 boinc boinc 190059768 Oct 11 20:28 HITS.46676269._057345.pool.root.1
[2025-10-11 20:29:49] -rw-r--r-- 1 boinc boinc       529 Oct 11 20:28 boinc_task_state.xml
[2025-10-11 20:29:49] -rw------- 1 boinc boinc      1017 Oct 11 20:28 memory_monitor_summary.json
[2025-10-11 20:29:49] -rw------- 1 boinc boinc        95 Oct 11 20:28 pilot_heartbeat.json
[2025-10-11 20:29:49] -rw------- 1 boinc boinc    319531 Oct 11 20:28 log.46676269._057345.job.log.tgz.1
[2025-10-11 20:29:49] -rw------- 1 boinc boinc      7743 Oct 11 20:28 heartbeat.json
[2025-10-11 20:29:49] -rw-r--r-- 1 boinc boinc      8192 Oct 11 20:29 boinc_mmap_file
[2025-10-11 20:29:49] -rw-r--r-- 1 boinc boinc        27 Oct 11 20:29 wrapper_checkpoint.txt
[2025-10-11 20:29:49] -rw------- 1 boinc boinc      4818 Oct 11 20:29 pilotlog.txt
[2025-10-11 20:29:49] -rw------- 1 boinc boinc   1229818 Oct 11 20:29 log.46676269._057345.job.log.1
[2025-10-11 20:29:49] -rw------- 1 boinc boinc       357 Oct 11 20:29 output.list
[2025-10-11 20:29:49] -rw-r--r-- 1 boinc boinc       620 Oct 11 20:29 runtime_log
[2025-10-11 20:29:49] -rw------- 1 boinc boinc   1566720 Oct 11 20:29 result.tar.gz
[2025-10-11 20:29:49] -rw-r--r-- 1 boinc boinc      8622 Oct 11 20:29 runtime_log.err
[2025-10-11 20:29:49] -rw------- 1 boinc boinc       643 Oct 11 20:29 KbaLDm0NnR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzpRMDm6vj3Sn.diag
[2025-10-11 20:29:49] -rw-r--r-- 1 boinc boinc     20573 Oct 11 20:29 stderr.txt
[2025-10-11 20:29:50] HITS file was successfully produced:
[2025-10-11 20:29:50] -rw------- 1 boinc boinc 190059768 Oct 11 20:28 shared/HITS.pool.root.1
[2025-10-11 20:29:50]  *** Contents of shared directory: ***
[2025-10-11 20:29:50] total 403280
[2025-10-11 20:29:50] -rw-r--r-- 2 boinc boinc 220725675 Oct 11 18:04 ATLAS.root_0
[2025-10-11 20:29:50] -rw-r--r-- 2 boinc boinc    569682 Oct 11 18:04 input.tar.gz
[2025-10-11 20:29:50] -rw-r--r-- 2 boinc boinc     15120 Oct 11 18:04 start_atlas.sh
[2025-10-11 20:29:50] -rw------- 1 boinc boinc 190059768 Oct 11 20:28 HITS.pool.root.1
[2025-10-11 20:29:50] -rw------- 1 boinc boinc   1566720 Oct 11 20:29 result.tar.gz
20:29:51 (1694336): run_atlas exited; CPU time 33329.799107
20:29:51 (1694336): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN