Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
13:12:51 (1629363): wrapper (7.7.26015): starting
13:12:51 (1629363): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 13:12:51] Arguments: --nthreads 4
[2025-10-11 13:12:51] Threads: 4
[2025-10-11 13:12:51] Checking for CVMFS
[2025-10-11 13:12:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:12:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:12:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:12:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:12:53] 2.11.3.0 4671 8520 97868 151593 3 1 2107839 4194304 0 130560 0 3721834 99.983 359559 805 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.59.5:3128 1
[2025-10-11 13:12:53] CVMFS is ok
[2025-10-11 13:12:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:12:53] Checking for apptainer binary...
[2025-10-11 13:12:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:12:53] Running /usr/bin/apptainer --version
[2025-10-11 13:12:53] apptainer version 1.4.2-1.fc42
[2025-10-11 13:12:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:12:53] R7OwensSE
[2025-10-11 13:12:53] apptainer works
[2025-10-11 13:12:53] Set ATHENA_PROC_NUMBER=4
[2025-10-11 13:12:53] Set ATHENA_CORE_NUMBER=4
[2025-10-11 13:12:53] Starting ATLAS job with PandaID=6838366751
[2025-10-11 13:12:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:33:29]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:33:29] 2025-10-11 20:32:37,061 | INFO     | time since job start (8368s) is within the limit (172800.0s)
[2025-10-11 15:33:29] 2025-10-11 20:32:37,819 | INFO     | monitor loop #636: job 0:6838366751 is in state 'finished'
[2025-10-11 15:33:29] 2025-10-11 20:32:37,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:33:29] 2025-10-11 20:32:39,066 | INFO     | time since job start (8370s) is within the limit (172800.0s)
[2025-10-11 15:33:29] 2025-10-11 20:32:39,759 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 15:33:29] 2025-10-11 20:32:39,761 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3229.2306249999997
[2025-10-11 15:33:29] 2025-10-11 20:32:39,763 | INFO     | using path: /data/boinc/slots/5/PanDA_Pilot-6838366751/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:33:29] 2025-10-11 20:32:39,764 | INFO     | extracted standard info from prmon json
[2025-10-11 15:33:29] 2025-10-11 20:32:39,764 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 15:33:29] 2025-10-11 20:32:39,764 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 15:33:29] 2025-10-11 20:32:39,764 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:33:29] 2025-10-11 20:32:39,764 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:33:29] 2025-10-11 20:32:39,766 | INFO     | fitting pss+swap vs Time
[2025-10-11 15:33:29] 2025-10-11 20:32:39,766 | INFO     | sum of square deviations: 797291228.0
[2025-10-11 15:33:29] 2025-10-11 20:32:39,766 | INFO     | sum of deviations: -35724371413.00001
[2025-10-11 15:33:29] 2025-10-11 20:32:39,766 | INFO     | mean x: 1760210565.0
[2025-10-11 15:33:29] 2025-10-11 20:32:39,766 | INFO     | mean y: 2510334.204379562
[2025-10-11 15:33:29] 2025-10-11 20:32:39,767 | INFO     | -- intersect: 78872581621.56412
[2025-10-11 15:33:29] 2025-10-11 20:32:39,767 | INFO     | intersect: 78872581621.56412
[2025-10-11 15:33:29] 2025-10-11 20:32:39,767 | INFO     | chi2: 1.572327972701018
[2025-10-11 15:33:29] 2025-10-11 20:32:39,767 | INFO     | sum of square deviations: 713140813.0
[2025-10-11 15:33:29] 2025-10-11 20:32:39,767 | INFO     | sum of deviations: -32896905635.0
[2025-10-11 15:33:29] 2025-10-11 20:32:39,767 | INFO     | mean x: 1760210412.5
[2025-10-11 15:33:29] 2025-10-11 20:32:39,767 | INFO     | mean y: 2515460.3636363638
[2025-10-11 15:33:29] 2025-10-11 20:32:39,768 | INFO     | -- intersect: 81200330509.20859
[2025-10-11 15:33:29] 2025-10-11 20:32:39,768 | INFO     | intersect: 81200330509.20859
[2025-10-11 15:33:29] 2025-10-11 20:32:39,768 | INFO     | chi2: 1.5665619243691113
[2025-10-11 15:33:29] 2025-10-11 20:32:39,768 | INFO     | current chi2=1.5665619243691113 (change=0.3667204573102806 %)
[2025-10-11 15:33:29] 2025-10-11 20:32:39,768 | INFO     | right removable region: 131
[2025-10-11 15:33:29] 2025-10-11 20:32:39,768 | INFO     | sum of square deviations: 713140813.0
[2025-10-11 15:33:29] 2025-10-11 20:32:39,768 | INFO     | sum of deviations: -50719421425.00001
[2025-10-11 15:33:29] 2025-10-11 20:32:39,768 | INFO     | mean x: 1760210717.5
[2025-10-11 15:33:29] 2025-10-11 20:32:39,768 | INFO     | mean y: 2536795.8181818184
[2025-10-11 15:33:29] 2025-10-11 20:32:39,769 | INFO     | -- intersect: 125190813150.55283
[2025-10-11 15:33:29] 2025-10-11 20:32:39,769 | INFO     | intersect: 125190813150.55283
[2025-10-11 15:33:29] 2025-10-11 20:32:39,769 | INFO     | chi2: 0.2440294888905487
[2025-10-11 15:33:29] 2025-10-11 20:32:39,769 | INFO     | current chi2=0.2440294888905487 (change=84.47973367341778 %)
[2025-10-11 15:33:29] 2025-10-11 20:32:39,769 | INFO     | sum of square deviations: 635130048.0
[2025-10-11 15:33:29] 2025-10-11 20:32:39,769 | INFO     | sum of deviations: -46556297817.0
[2025-10-11 15:33:29] 2025-10-11 20:32:39,769 | INFO     | mean x: 1760210870.0
[2025-10-11 15:33:29] 2025-10-11 20:32:39,769 | INFO     | mean y: 2528645.102362205
[2025-10-11 15:33:29] 2025-10-11 20:32:39,769 | INFO     | -- intersect: 129029492087.46286
[2025-10-11 15:33:29] 2025-10-11 20:32:39,769 | INFO     | intersect: 129029492087.46286
[2025-10-11 15:33:29] 2025-10-11 20:32:39,770 | INFO     | chi2: 0.24093454159579902
[2025-10-11 15:33:29] 2025-10-11 20:32:39,770 | INFO     | current chi2=0.24093454159579902 (change=1.2682677445338661 %)
[2025-10-11 15:33:29] 2025-10-11 20:32:39,770 | INFO     | left removable region: 20
[2025-10-11 15:33:29] 2025-10-11 20:32:39,770 | INFO     | sum of square deviations: 424045160.0
[2025-10-11 15:33:29] 2025-10-11 20:32:39,770 | INFO     | sum of deviations: -34372892256.999985
[2025-10-11 15:33:29] 2025-10-11 20:32:39,770 | INFO     | mean x: 1760210992.0
[2025-10-11 15:33:29] 2025-10-11 20:32:39,770 | INFO     | mean y: 2515226.2162162163
[2025-10-11 15:33:29] 2025-10-11 20:32:39,770 | INFO     | -- intersect: 142684353117.26315
[2025-10-11 15:33:29] 2025-10-11 20:32:39,770 | INFO     | intersect: 142684353117.26315
[2025-10-11 15:33:29] 2025-10-11 20:32:39,770 | INFO     | chi2: 0.22349441690550195
[2025-10-11 15:33:29] 2025-10-11 20:32:39,771 | INFO     | -- intersect: 142684353117.26315
[2025-10-11 15:33:29] 2025-10-11 20:32:39,771 | INFO     | current memory leak: -81.06 B/s (using 111 data points, chi2=0.22)
[2025-10-11 15:33:29] 2025-10-11 20:32:39,771 | INFO     | could have reported an average CPU frequency of 3414 MHz (8 samples)
[2025-10-11 15:33:29] 2025-10-11 20:32:39,771 | INFO     | ..............................
[2025-10-11 15:33:29] 2025-10-11 20:32:39,771 | INFO     | . Timing measurements:
[2025-10-11 15:33:29] 2025-10-11 20:32:39,771 | INFO     | . get job = 0 s
[2025-10-11 15:33:29] 2025-10-11 20:32:39,771 | INFO     | . initial setup = 3 s
[2025-10-11 15:33:29] 2025-10-11 20:32:39,771 | INFO     | . payload setup = 6 s
[2025-10-11 15:33:29] 2025-10-11 20:32:39,771 | INFO     | . stage-in = 0 s
[2025-10-11 15:33:29] 2025-10-11 20:32:39,771 | INFO     | . payload execution = 8337 s
[2025-10-11 15:33:29] 2025-10-11 20:32:39,771 | INFO     | . stage-out = 0 s
[2025-10-11 15:33:29] 2025-10-11 20:32:39,771 | INFO     | . log creation = 0 s
[2025-10-11 15:33:29] 2025-10-11 20:32:39,771 | INFO     | ..............................
[2025-10-11 15:33:29] 2025-10-11 20:32:40,011 | INFO     | 
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | job summary report
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | --------------------------------------------------
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | PanDA job id: 6838366751
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | task id: 46676269
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | errors: (none)
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | pilot state: finished 
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | transexitcode: 0
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | exeerrorcode: 0
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | exeerrordiag: 
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | exitcode: 0
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | exitmsg: OK
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | cpuconsumptiontime: 32275 s
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | nevents: 400
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | neventsw: 0
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | pid: 1639772
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | pgrp: 1639772
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | corecount: 4
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | event service: False
[2025-10-11 15:33:29] 2025-10-11 20:32:40,012 | INFO     | sizes: {0: 2348854, 5: 2349116, 11: 2349172, 8347: 2376988, 8349: 2386036, 8355: 2386174}
[2025-10-11 15:33:29] 2025-10-11 20:32:40,013 | INFO     | --------------------------------------------------
[2025-10-11 15:33:29] 2025-10-11 20:32:40,013 | INFO     | 
[2025-10-11 15:33:29] 2025-10-11 20:32:40,013 | INFO     | executing command: ls -lF /data/boinc/slots/5
[2025-10-11 15:33:29] 2025-10-11 20:32:40,049 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,049 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,049 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,049 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,050 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,050 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,050 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,050 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,050 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,050 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,050 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,051 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,051 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,051 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:33:29] 2025-10-11 20:32:40,051 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,051 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:33:29] 2025-10-11 20:32:40,051 | INFO     | job 6838366751 has completed (purged errors)
[2025-10-11 15:33:29] 2025-10-11 20:32:40,051 | INFO     | overall cleanup function is called
[2025-10-11 15:33:29] 2025-10-11 20:32:41,059 | INFO     | --- collectZombieJob: --- 10, [1639772]
[2025-10-11 15:33:29] 2025-10-11 20:32:41,059 | INFO     | zombie collector waiting for pid 1639772
[2025-10-11 15:33:29] 2025-10-11 20:32:41,059 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:33:29] 2025-10-11 20:32:41,059 | INFO     | collected zombie processes
[2025-10-11 15:33:29] 2025-10-11 20:32:41,059 | INFO     | will attempt to kill all subprocesses of pid=1639772
[2025-10-11 15:33:29] 2025-10-11 20:32:41,159 | INFO     | process IDs to be killed: [1639772] (in reverse order)
[2025-10-11 15:33:29] 2025-10-11 20:32:41,219 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:33:29] 2025-10-11 20:32:41,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:33:29] 2025-10-11 20:32:41,223 | INFO     | did not find any defunct processes belonging to 1639772
[2025-10-11 15:33:29] 2025-10-11 20:32:41,227 | INFO     | did not find any defunct processes belonging to 1639772
[2025-10-11 15:33:29] 2025-10-11 20:32:41,227 | INFO     | ready for new job
[2025-10-11 15:33:29] 2025-10-11 20:32:41,227 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:33:29] 2025-10-11 20:32:41,229 | INFO     | ***************************************
[2025-10-11 15:33:29] 2025-10-11 20:32:41,229 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:33:29] 2025-10-11 20:32:41,229 | INFO     | ***************************************
[2025-10-11 15:33:29] 2025-10-11 20:32:41,229 | INFO     | 
[2025-10-11 15:33:29] 2025-10-11 20:32:41,230 | INFO     | architecture information:
[2025-10-11 15:33:29] 2025-10-11 20:32:41,231 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:33:29] 2025-10-11 20:32:41,250 | INFO     | cat /etc/os-release:
[2025-10-11 15:33:29] NAME="CentOS Linux"
[2025-10-11 15:33:29] VERSION="7 (Core)"
[2025-10-11 15:33:29] ID="centos"
[2025-10-11 15:33:29] ID_LIKE="rhel fedora"
[2025-10-11 15:33:29] VERSION_ID="7"
[2025-10-11 15:33:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:33:29] ANSI_COLOR="0;31"
[2025-10-11 15:33:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:33:29] HOME_URL="https://www.centos.org/"
[2025-10-11 15:33:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:33:29] 
[2025-10-11 15:33:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:33:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:33:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:33:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:33:29] 
[2025-10-11 15:33:29] 2025-10-11 20:32:41,250 | INFO     | ***************************************
[2025-10-11 15:33:29] 2025-10-11 20:32:41,753 | INFO     | executing command: df -mP /data/boinc/slots/5
[2025-10-11 15:33:29] 2025-10-11 20:32:41,780 | INFO     | sufficient remaining disk space (406217293824 B)
[2025-10-11 15:33:29] 2025-10-11 20:32:41,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:33:29] 2025-10-11 20:32:41,780 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:33:29] 2025-10-11 20:32:41,780 | INFO     | update_server=False
[2025-10-11 15:33:29] 2025-10-11 20:32:41,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:33:29] 2025-10-11 20:32:41,781 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:33:29] 2025-10-11 20:32:41,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:33:29] 2025-10-11 20:32:41,781 | INFO     | aborting loop
[2025-10-11 15:33:29] 2025-10-11 20:32:41,863 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:33:29] 2025-10-11 20:32:42,206 | INFO     | all data control threads have been joined
[2025-10-11 15:33:29] 2025-10-11 20:32:42,398 | INFO     | all payload control threads have been joined
[2025-10-11 15:33:29] 2025-10-11 20:32:42,786 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:42,786 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:42,786 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:42,840 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:42,855 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:42,949 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:42,973 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:43,076 | INFO     | all job control threads have been joined
[2025-10-11 15:33:29] 2025-10-11 20:32:43,211 | INFO     | [data] control thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:43,403 | INFO     | [payload] control thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:43,517 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:43,673 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:43,868 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:44,081 | INFO     | [job] control thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:44,106 | INFO     | [job] validate thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:44,108 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:32:44,439 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:33:29] 2025-10-11 20:32:48,445 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:33:29] 2025-10-11 20:33:12,256 | INFO     | PID=1633235 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:33:29] 2025-10-11 20:33:12,256 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:33:29] 2025-10-11 20:33:12,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:33:29] 2025-10-11 20:33:12,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:33:29] 2025-10-11 20:33:22,439 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:33:29] 2025-10-11 20:33:23,849 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139620930443072)>', '<ExcThread(monitor, started 139620427740928)>']
[2025-10-11 15:33:29] 2025-10-11 20:33:24,316 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:33:29] 2025-10-11 20:33:24,317 | INFO     | [monitor] control thread has ended
[2025-10-11 15:33:29] 2025-10-11 20:33:28,874 | INFO     | all workflow threads have been joined
[2025-10-11 15:33:29] 2025-10-11 20:33:28,874 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:33:29] 2025-10-11 20:33:28,874 | INFO     | traces error code: 0
[2025-10-11 15:33:29] 2025-10-11 20:33:28,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:33:29] 2025-10-11 20:33:28,998 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:33:29] 2025-10-11 20:33:29,002 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:33:29] 2025-10-11 20:33:29,005 [wrapper] pilotpid: 1633235
[2025-10-11 15:33:29] 2025-10-11 20:33:29,007 [wrapper] Pilot exit status: 0
[2025-10-11 15:33:29] 2025-10-11 20:33:29,024 [wrapper] pandaids: 6838366751
[2025-10-11 15:33:29] 2025-10-11 20:33:29,058 [wrapper] cleanup supervisor_pilot 1659575 1633236
[2025-10-11 15:33:29] 2025-10-11 20:33:29,061 [wrapper] Test setup, not cleaning
[2025-10-11 15:33:29] 2025-10-11 20:33:29,063 [wrapper] apfmon messages muted
[2025-10-11 15:33:29] 2025-10-11 20:33:29,066 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:33:29] 2025-10-11 20:33:29,069 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:33:29]  *** Error codes and diagnostics ***
[2025-10-11 15:33:29]     "exeErrorCode": 0,
[2025-10-11 15:33:29]     "exeErrorDiag": "",
[2025-10-11 15:33:29]     "pilotErrorCode": 0,
[2025-10-11 15:33:29]     "pilotErrorDiag": "",
[2025-10-11 15:33:29]  *** Listing of results directory ***
[2025-10-11 15:33:29] total 414928
[2025-10-11 15:33:29] -rw-r--r-- 1 boinc boinc    557409 Oct 11 07:28 pilot3.tar.gz
[2025-10-11 15:33:29] -rw-r--r-- 1 boinc boinc      5112 Oct 11 07:32 queuedata.json
[2025-10-11 15:33:29] -rwx------ 1 boinc boinc     36292 Oct 11 07:34 runpilot2-wrapper.sh
[2025-10-11 15:33:29] -rw-r--r-- 1 boinc boinc       100 Oct 11 13:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:33:29] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 13:12 run_atlas
[2025-10-11 15:33:29] -rw-r--r-- 1 boinc boinc       105 Oct 11 13:12 job.xml
[2025-10-11 15:33:29] -rw-r--r-- 2 boinc boinc 220389332 Oct 11 13:12 EVNT.46676267._002313.pool.root.1
[2025-10-11 15:33:29] -rw-r--r-- 1 boinc boinc      9535 Oct 11 13:12 init_data.xml
[2025-10-11 15:33:29] drwxrwx--x 2 boinc boinc      4096 Oct 11 13:12 shared
[2025-10-11 15:33:29] -rw-r--r-- 2 boinc boinc    569679 Oct 11 13:12 input.tar.gz
[2025-10-11 15:33:29] -rw-r--r-- 2 boinc boinc     15120 Oct 11 13:12 start_atlas.sh
[2025-10-11 15:33:29] -rw-r--r-- 1 boinc boinc         0 Oct 11 13:12 boinc_lockfile
[2025-10-11 15:33:29] -rw-r--r-- 1 boinc boinc      2550 Oct 11 13:12 pandaJob.out
[2025-10-11 15:33:29] -rw------- 1 boinc boinc    975520 Oct 11 13:13 agis_schedconf.cvmfs.json
[2025-10-11 15:33:29] -rw------- 1 boinc boinc   1560580 Oct 11 13:13 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:33:29] drwx------ 5 boinc boinc      4096 Oct 11 13:13 pilot3
[2025-10-11 15:33:29] -rw------- 1 boinc boinc 197580330 Oct 11 15:32 HITS.46676269._057618.pool.root.1
[2025-10-11 15:33:29] -rw------- 1 boinc boinc        95 Oct 11 15:32 pilot_heartbeat.json
[2025-10-11 15:33:29] -rw-r--r-- 1 boinc boinc       529 Oct 11 15:32 boinc_task_state.xml
[2025-10-11 15:33:29] -rw------- 1 boinc boinc      1017 Oct 11 15:32 memory_monitor_summary.json
[2025-10-11 15:33:29] -rw------- 1 boinc boinc    315062 Oct 11 15:32 log.46676269._057618.job.log.tgz.1
[2025-10-11 15:33:29] -rw------- 1 boinc boinc      7748 Oct 11 15:32 heartbeat.json
[2025-10-11 15:33:29] -rw-r--r-- 1 boinc boinc      8192 Oct 11 15:33 boinc_mmap_file
[2025-10-11 15:33:29] -rw-r--r-- 1 boinc boinc        27 Oct 11 15:33 wrapper_checkpoint.txt
[2025-10-11 15:33:29] -rw------- 1 boinc boinc      4746 Oct 11 15:33 pilotlog.txt
[2025-10-11 15:33:29] -rw------- 1 boinc boinc   1188806 Oct 11 15:33 log.46676269._057618.job.log.1
[2025-10-11 15:33:29] -rw------- 1 boinc boinc       357 Oct 11 15:33 output.list
[2025-10-11 15:33:29] -rw-r--r-- 1 boinc boinc       620 Oct 11 15:33 runtime_log
[2025-10-11 15:33:29] -rw------- 1 boinc boinc   1525760 Oct 11 15:33 result.tar.gz
[2025-10-11 15:33:29] -rw------- 1 boinc boinc       644 Oct 11 15:33 uDHODmzynR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWsRMDmrt1EQm.diag
[2025-10-11 15:33:29] -rw-r--r-- 1 boinc boinc      8622 Oct 11 15:33 runtime_log.err
[2025-10-11 15:33:29] -rw-r--r-- 1 boinc boinc     20786 Oct 11 15:33 stderr.txt
[2025-10-11 15:33:29] HITS file was successfully produced:
[2025-10-11 15:33:29] -rw------- 1 boinc boinc 197580330 Oct 11 15:32 shared/HITS.pool.root.1
[2025-10-11 15:33:29]  *** Contents of shared directory: ***
[2025-10-11 15:33:29] total 410248
[2025-10-11 15:33:29] -rw-r--r-- 2 boinc boinc 220389332 Oct 11 13:12 ATLAS.root_0
[2025-10-11 15:33:29] -rw-r--r-- 2 boinc boinc    569679 Oct 11 13:12 input.tar.gz
[2025-10-11 15:33:29] -rw-r--r-- 2 boinc boinc     15120 Oct 11 13:12 start_atlas.sh
[2025-10-11 15:33:29] -rw------- 1 boinc boinc 197580330 Oct 11 15:32 HITS.pool.root.1
[2025-10-11 15:33:29] -rw------- 1 boinc boinc   1525760 Oct 11 15:33 result.tar.gz
15:33:31 (1629363): run_atlas exited; CPU time 32353.018162
15:33:31 (1629363): called boinc_finish(0)

</stderr_txt>
]]>

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