Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:39:30 (3699172): wrapper (7.7.26015): starting
13:39:30 (3699172): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 13:39:30] Arguments: --nthreads 8
[2025-10-11 13:39:30] Threads: 8
[2025-10-11 13:39:30] Checking for CVMFS
[2025-10-11 13:39:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:39:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:39:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:39:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:39:31] 2.13.2.0 2356181 128134 258008 151591 0 237 23104880 32935936 27111 16776704 0 119416739 99.724 90871179 30479 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 13:39:31] CVMFS is ok
[2025-10-11 13:39:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:39:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:39:31] Further information can be found at the LHC@home message board.
[2025-10-11 13:39:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:39:31] Checking for apptainer binary...
[2025-10-11 13:39:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:39:31] Running /usr/bin/apptainer --version
[2025-10-11 13:39:31] apptainer version 1.4.3-1.el9
[2025-10-11 13:39:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:39:32] c-6-2.aglt2.org
[2025-10-11 13:39:32] apptainer works
[2025-10-11 13:39:32] Set ATHENA_PROC_NUMBER=8
[2025-10-11 13:39:32] Set ATHENA_CORE_NUMBER=8
[2025-10-11 13:39:32] Starting ATLAS job with PandaID=6838366757
[2025-10-11 13:39:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:22:54]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:22:54] 2025-10-12 01:21:46,335 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 21:22:54] 2025-10-12 01:21:46,376 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.0350500000022
[2025-10-11 21:22:54] 2025-10-12 01:21:46,421 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838366757/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 21:22:54] 2025-10-12 01:21:46,422 | INFO     | extracted standard info from prmon json
[2025-10-11 21:22:54] 2025-10-12 01:21:46,422 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 21:22:54] 2025-10-12 01:21:46,422 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 21:22:54] 2025-10-12 01:21:46,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:22:54] 2025-10-12 01:21:46,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:22:54] 2025-10-12 01:21:46,474 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:22:54] 2025-10-12 01:21:46,474 | INFO     | sum of square deviations: 28823801601.514313
[2025-10-11 21:22:54] 2025-10-12 01:21:46,568 | INFO     | sum of deviations: 91509799331.32458
[2025-10-11 21:22:54] 2025-10-12 01:21:46,568 | INFO     | mean x: 1760218216.8035321
[2025-10-11 21:22:54] 2025-10-12 01:21:46,568 | INFO     | mean y: 2094893.1721854305
[2025-10-11 21:22:54] 2025-10-12 01:21:46,568 | INFO     | -- intersect: -5586245535.543877
[2025-10-11 21:22:54] 2025-10-12 01:21:46,568 | INFO     | intersect: -5586245535.543877
[2025-10-11 21:22:54] 2025-10-12 01:21:46,569 | INFO     | chi2: 2.959941394227988
[2025-10-11 21:22:54] 2025-10-12 01:21:46,570 | INFO     | sum of square deviations: 27879876741.49112
[2025-10-11 21:22:54] 2025-10-12 01:21:46,639 | INFO     | sum of deviations: 118678160258.12949
[2025-10-11 21:22:54] 2025-10-12 01:21:46,639 | INFO     | mean x: 1760218064.3080356
[2025-10-11 21:22:54] 2025-10-12 01:21:46,639 | INFO     | mean y: 2099249.1584821427
[2025-10-11 21:22:54] 2025-10-12 01:21:46,640 | INFO     | -- intersect: -7490740244.436452
[2025-10-11 21:22:54] 2025-10-12 01:21:46,640 | INFO     | intersect: -7490740244.436452
[2025-10-11 21:22:54] 2025-10-12 01:21:46,691 | INFO     | monitor loop #1462: job 0:6838366757 is in state 'finished'
[2025-10-11 21:22:54] 2025-10-12 01:21:46,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:22:54] 2025-10-12 01:21:46,703 | INFO     | chi2: 2.279745527441249
[2025-10-11 21:22:54] 2025-10-12 01:21:46,704 | INFO     | current chi2=2.279745527441249 (change=22.980045081742162 %)
[2025-10-11 21:22:54] 2025-10-12 01:21:46,704 | INFO     | right removable region: 447
[2025-10-11 21:22:54] 2025-10-12 01:21:46,705 | INFO     | sum of square deviations: 27879710088.25
[2025-10-11 21:22:54] 2025-10-12 01:21:46,793 | INFO     | sum of deviations: 10920989646.37502
[2025-10-11 21:22:54] 2025-10-12 01:21:46,841 | INFO     | mean x: 1760218369.3125
[2025-10-11 21:22:54] 2025-10-12 01:21:46,841 | INFO     | mean y: 2107877.8973214286
[2025-10-11 21:22:54] 2025-10-12 01:21:46,841 | INFO     | -- intersect: -687401680.3359497
[2025-10-11 21:22:54] 2025-10-12 01:21:46,841 | INFO     | intersect: -687401680.3359497
[2025-10-11 21:22:54] 2025-10-12 01:21:46,850 | INFO     | chi2: 1.0915174196189648
[2025-10-11 21:22:54] 2025-10-12 01:21:46,850 | INFO     | current chi2=1.0915174196189648 (change=63.1236813760073 %)
[2025-10-11 21:22:54] 2025-10-12 01:21:46,851 | INFO     | sum of square deviations: 26956483503.55308
[2025-10-11 21:22:54] 2025-10-12 01:21:46,901 | INFO     | time since job start (27713s) is within the limit (172800.0s)
[2025-10-11 21:22:54] 2025-10-12 01:21:46,926 | INFO     | sum of deviations: -6049612848.948078
[2025-10-11 21:22:54] 2025-10-12 01:21:46,926 | INFO     | mean x: 1760218521.8194132
[2025-10-11 21:22:54] 2025-10-12 01:21:46,926 | INFO     | mean y: 2110677.738148984
[2025-10-11 21:22:54] 2025-10-12 01:21:46,927 | INFO     | -- intersect: 397141453.3640402
[2025-10-11 21:22:54] 2025-10-12 01:21:46,927 | INFO     | intersect: 397141453.3640402
[2025-10-11 21:22:54] 2025-10-12 01:21:46,927 | INFO     | chi2: 1.0202109368062167
[2025-10-11 21:22:54] 2025-10-12 01:21:46,943 | INFO     | current chi2=1.0202109368062167 (change=6.532784684063064 %)
[2025-10-11 21:22:54] 2025-10-12 01:21:46,944 | INFO     | left removable region: 20
[2025-10-11 21:22:54] 2025-10-12 01:21:46,944 | INFO     | sum of square deviations: 24139872420.47305
[2025-10-11 21:22:54] 2025-10-12 01:21:46,957 | INFO     | sum of deviations: 33260146342.71662
[2025-10-11 21:22:54] 2025-10-12 01:21:46,958 | INFO     | mean x: 1760218643.822014
[2025-10-11 21:22:54] 2025-10-12 01:21:46,958 | INFO     | mean y: 2113176.56206089
[2025-10-11 21:22:54] 2025-10-12 01:21:46,958 | INFO     | -- intersect: -2423132850.79665
[2025-10-11 21:22:54] 2025-10-12 01:21:46,958 | INFO     | intersect: -2423132850.79665
[2025-10-11 21:22:54] 2025-10-12 01:21:46,959 | INFO     | chi2: 0.297428494109261
[2025-10-11 21:22:54] 2025-10-12 01:21:46,959 | INFO     | -- intersect: -2423132850.79665
[2025-10-11 21:22:54] 2025-10-12 01:21:46,959 | INFO     | current memory leak: 1.38 B/s (using 427 data points, chi2=0.30)
[2025-10-11 21:22:54] 2025-10-12 01:21:46,960 | INFO     | could have reported an average CPU frequency of 2604 MHz (18 samples)
[2025-10-11 21:22:54] 2025-10-12 01:21:46,960 | INFO     | ..............................
[2025-10-11 21:22:54] 2025-10-12 01:21:46,960 | INFO     | . Timing measurements:
[2025-10-11 21:22:54] 2025-10-12 01:21:46,960 | INFO     | . get job = 0 s
[2025-10-11 21:22:54] 2025-10-12 01:21:46,960 | INFO     | . initial setup = 3 s
[2025-10-11 21:22:54] 2025-10-12 01:21:46,960 | INFO     | . payload setup = 6 s
[2025-10-11 21:22:54] 2025-10-12 01:21:46,961 | INFO     | . stage-in = 0 s
[2025-10-11 21:22:54] 2025-10-12 01:21:46,961 | INFO     | . payload execution = 27639 s
[2025-10-11 21:22:54] 2025-10-12 01:21:46,961 | INFO     | . stage-out = 3 s
[2025-10-11 21:22:54] 2025-10-12 01:21:46,961 | INFO     | . log creation = 0 s
[2025-10-11 21:22:54] 2025-10-12 01:21:46,961 | INFO     | ..............................
[2025-10-11 21:22:54] 2025-10-12 01:21:47,473 | INFO     | 
[2025-10-11 21:22:54] 2025-10-12 01:21:47,473 | INFO     | job summary report
[2025-10-11 21:22:54] 2025-10-12 01:21:47,474 | INFO     | --------------------------------------------------
[2025-10-11 21:22:54] 2025-10-12 01:21:47,474 | INFO     | PanDA job id: 6838366757
[2025-10-11 21:22:54] 2025-10-12 01:21:47,474 | INFO     | task id: 46676269
[2025-10-11 21:22:54] 2025-10-12 01:21:47,474 | INFO     | errors: (none)
[2025-10-11 21:22:54] 2025-10-12 01:21:47,474 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:22:54] 2025-10-12 01:21:47,474 | INFO     | pilot state: finished 
[2025-10-11 21:22:54] 2025-10-12 01:21:47,474 | INFO     | transexitcode: 0
[2025-10-11 21:22:54] 2025-10-12 01:21:47,474 | INFO     | exeerrorcode: 0
[2025-10-11 21:22:54] 2025-10-12 01:21:47,475 | INFO     | exeerrordiag: 
[2025-10-11 21:22:54] 2025-10-12 01:21:47,475 | INFO     | exitcode: 0
[2025-10-11 21:22:54] 2025-10-12 01:21:47,475 | INFO     | exitmsg: OK
[2025-10-11 21:22:54] 2025-10-12 01:21:47,475 | INFO     | cpuconsumptiontime: 48806 s
[2025-10-11 21:22:54] 2025-10-12 01:21:47,475 | INFO     | nevents: 400
[2025-10-11 21:22:54] 2025-10-12 01:21:47,475 | INFO     | neventsw: 0
[2025-10-11 21:22:54] 2025-10-12 01:21:47,475 | INFO     | pid: 3711307
[2025-10-11 21:22:54] 2025-10-12 01:21:47,475 | INFO     | pgrp: 3711307
[2025-10-11 21:22:54] 2025-10-12 01:21:47,476 | INFO     | corecount: 8
[2025-10-11 21:22:54] 2025-10-12 01:21:47,476 | INFO     | event service: False
[2025-10-11 21:22:54] 2025-10-12 01:21:47,476 | INFO     | sizes: {0: 2348686, 1: 2348885, 11: 2349147, 12: 2349175, 27651: 2385697, 27652: 2385696, 27657: 2394878, 27661: 2394934, 27694: 2395128}
[2025-10-11 21:22:54] 2025-10-12 01:21:47,476 | INFO     | --------------------------------------------------
[2025-10-11 21:22:54] 2025-10-12 01:21:47,476 | INFO     | 
[2025-10-11 21:22:54] 2025-10-12 01:21:47,476 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 21:22:54] 2025-10-12 01:21:47,637 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,637 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,637 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,637 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,637 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,638 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,638 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,638 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,638 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,638 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,638 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,639 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,639 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,639 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,639 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,639 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:22:54] 2025-10-12 01:21:47,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,660 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:22:54] 2025-10-12 01:21:47,661 | INFO     | job 6838366757 has completed (purged errors)
[2025-10-11 21:22:54] 2025-10-12 01:21:47,661 | INFO     | overall cleanup function is called
[2025-10-11 21:22:54] 2025-10-12 01:21:48,702 | INFO     | --- collectZombieJob: --- 10, [3711307]
[2025-10-11 21:22:54] 2025-10-12 01:21:48,703 | INFO     | zombie collector waiting for pid 3711307
[2025-10-11 21:22:54] 2025-10-12 01:21:48,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:22:54] 2025-10-12 01:21:48,703 | INFO     | collected zombie processes
[2025-10-11 21:22:54] 2025-10-12 01:21:48,703 | INFO     | will attempt to kill all subprocesses of pid=3711307
[2025-10-11 21:22:54] 2025-10-12 01:21:51,053 | INFO     | process IDs to be killed: [3711307] (in reverse order)
[2025-10-11 21:22:54] 2025-10-12 01:21:51,229 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:22:54] 2025-10-12 01:21:51,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:22:54] 2025-10-12 01:21:51,288 | INFO     | did not find any defunct processes belonging to 3711307
[2025-10-11 21:22:54] 2025-10-12 01:21:51,352 | INFO     | did not find any defunct processes belonging to 3711307
[2025-10-11 21:22:54] 2025-10-12 01:21:51,367 | INFO     | ready for new job
[2025-10-11 21:22:54] 2025-10-12 01:21:51,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:22:54] 2025-10-12 01:21:51,370 | INFO     | ***************************************
[2025-10-11 21:22:54] 2025-10-12 01:21:51,370 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:22:54] 2025-10-12 01:21:51,370 | INFO     | ***************************************
[2025-10-11 21:22:54] 2025-10-12 01:21:51,370 | INFO     | 
[2025-10-11 21:22:54] 2025-10-12 01:21:51,388 | INFO     | architecture information:
[2025-10-11 21:22:54] 2025-10-12 01:21:51,407 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:22:54] 2025-10-12 01:21:51,532 | INFO     | cat /etc/os-release:
[2025-10-11 21:22:54] NAME="CentOS Linux"
[2025-10-11 21:22:54] VERSION="7 (Core)"
[2025-10-11 21:22:54] ID="centos"
[2025-10-11 21:22:54] ID_LIKE="rhel fedora"
[2025-10-11 21:22:54] VERSION_ID="7"
[2025-10-11 21:22:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:22:54] ANSI_COLOR="0;31"
[2025-10-11 21:22:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:22:54] HOME_URL="https://www.centos.org/"
[2025-10-11 21:22:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:22:54] 
[2025-10-11 21:22:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:22:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:22:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:22:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:22:54] 
[2025-10-11 21:22:54] 2025-10-12 01:21:51,532 | INFO     | ***************************************
[2025-10-11 21:22:54] 2025-10-12 01:21:52,036 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 21:22:54] 2025-10-12 01:21:52,236 | INFO     | sufficient remaining disk space (75848744960 B)
[2025-10-11 21:22:54] 2025-10-12 01:21:52,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:22:54] 2025-10-12 01:21:52,237 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:22:54] 2025-10-12 01:21:52,237 | INFO     | update_server=False
[2025-10-11 21:22:54] 2025-10-12 01:21:52,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:22:54] 2025-10-12 01:21:52,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:22:54] 2025-10-12 01:21:52,321 | INFO     | all data control threads have been joined
[2025-10-11 21:22:54] 2025-10-12 01:21:52,554 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:22:54] 2025-10-12 01:21:52,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:22:54] 2025-10-12 01:21:52,767 | INFO     | aborting loop
[2025-10-11 21:22:54] 2025-10-12 01:21:53,177 | INFO     | all job control threads have been joined
[2025-10-11 21:22:54] 2025-10-12 01:21:53,242 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:53,327 | INFO     | [data] control thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:53,433 | INFO     | all payload control threads have been joined
[2025-10-11 21:22:54] 2025-10-12 01:21:53,496 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:53,577 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:53,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:22:54] 2025-10-12 01:21:53,773 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:53,879 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:53,887 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:54,103 | INFO     | [job] validate thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:54,184 | INFO     | [job] control thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:54,360 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:54,362 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:54,441 | INFO     | [payload] control thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:54,627 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:54,850 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:55,733 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:21:56,267 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:22:54] 2025-10-12 01:22:21,635 | INFO     | PID=3703005 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:22:54] 2025-10-12 01:22:21,635 | INFO     | .. there are 41 such processes running
[2025-10-11 21:22:54] 2025-10-12 01:22:21,635 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:22:54] 2025-10-12 01:22:21,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:22:54] 2025-10-12 01:22:21,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:22:54] 2025-10-12 01:22:47,330 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:22:54] 2025-10-12 01:22:47,886 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123193816896)>', '<ExcThread(monitor, started 140122920032000)>']
[2025-10-11 21:22:54] 2025-10-12 01:22:47,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:22:54] 2025-10-12 01:22:47,908 | INFO     | [monitor] control thread has ended
[2025-10-11 21:22:54] 2025-10-12 01:22:52,912 | INFO     | all workflow threads have been joined
[2025-10-11 21:22:54] 2025-10-12 01:22:52,913 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:22:54] 2025-10-12 01:22:52,913 | INFO     | traces error code: 0
[2025-10-11 21:22:54] 2025-10-12 01:22:52,913 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:22:54] 2025-10-12 01:22:53,762 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:22:54] 2025-10-12 01:22:53,764 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:22:54] 2025-10-12 01:22:53,766 [wrapper] pilotpid: 3703005
[2025-10-11 21:22:54] 2025-10-12 01:22:53,768 [wrapper] Pilot exit status: 0
[2025-10-11 21:22:54] 2025-10-12 01:22:53,822 [wrapper] pandaids: 6838366757
[2025-10-11 21:22:54] 2025-10-12 01:22:53,898 [wrapper] cleanup supervisor_pilot  804593 3703006
[2025-10-11 21:22:54] 2025-10-12 01:22:53,901 [wrapper] Test setup, not cleaning
[2025-10-11 21:22:54] 2025-10-12 01:22:53,903 [wrapper] apfmon messages muted
[2025-10-11 21:22:54] 2025-10-12 01:22:53,911 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:22:54] 2025-10-12 01:22:53,943 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:22:54]  *** Error codes and diagnostics ***
[2025-10-11 21:22:54]     "exeErrorCode": 0,
[2025-10-11 21:22:54]     "exeErrorDiag": "",
[2025-10-11 21:22:54]     "pilotErrorCode": 0,
[2025-10-11 21:22:54]     "pilotErrorDiag": "",
[2025-10-11 21:22:54]  *** Listing of results directory ***
[2025-10-11 21:22:54] total 411164
[2025-10-11 21:22:54] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 08:28 pilot3.tar.gz
[2025-10-11 21:22:54] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 08:32 queuedata.json
[2025-10-11 21:22:54] -rwx------. 1 boincer umatlas     36292 Oct 11 08:34 runpilot2-wrapper.sh
[2025-10-11 21:22:54] -rw-r--r--. 1 boincer umatlas       100 Oct 11 13:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:22:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 13:39 run_atlas
[2025-10-11 21:22:54] -rw-r--r--. 1 boincer umatlas       105 Oct 11 13:39 job.xml
[2025-10-11 21:22:54] -rw-r--r--. 2 boincer umatlas 220389332 Oct 11 13:39 EVNT.46676267._002313.pool.root.1
[2025-10-11 21:22:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:39 start_atlas.sh
[2025-10-11 21:22:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 13:39 shared
[2025-10-11 21:22:54] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 13:39 input.tar.gz
[2025-10-11 21:22:54] -rw-r--r--. 1 boincer umatlas         0 Oct 11 13:39 boinc_lockfile
[2025-10-11 21:22:54] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 13:39 pandaJob.out
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas    975520 Oct 11 13:39 agis_schedconf.cvmfs.json
[2025-10-11 21:22:54] drwx------. 5 boincer umatlas      4096 Oct 11 13:39 pilot3
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas 189120012 Oct 11 21:19 HITS.46676269._057624.pool.root.1
[2025-10-11 21:22:54] -rw-r--r--. 1 boincer umatlas       531 Oct 11 21:19 boinc_task_state.xml
[2025-10-11 21:22:54] -rw-r--r--. 1 boincer umatlas      6656 Oct 11 21:19 init_data.xml
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas      1039 Oct 11 21:20 memory_monitor_summary.json
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas   1560580 Oct 11 21:21 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas    616756 Oct 11 21:21 log.46676269._057624.job.log.tgz.1
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas        95 Oct 11 21:21 pilot_heartbeat.json
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas      7820 Oct 11 21:21 heartbeat.json
[2025-10-11 21:22:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:22 boinc_mmap_file
[2025-10-11 21:22:54] -rw-r--r--. 1 boincer umatlas        28 Oct 11 21:22 wrapper_checkpoint.txt
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas      4824 Oct 11 21:22 pilotlog.txt
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas   3195811 Oct 11 21:22 log.46676269._057624.job.log.1
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas       357 Oct 11 21:22 output.list
[2025-10-11 21:22:54] -rw-r--r--. 1 boincer umatlas       620 Oct 11 21:22 runtime_log
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas   3829760 Oct 11 21:22 result.tar.gz
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas       654 Oct 11 21:22 S4IKDm0ynR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcsRMDmc6DYkm.diag
[2025-10-11 21:22:54] -rw-r--r--. 1 boincer umatlas      8689 Oct 11 21:22 runtime_log.err
[2025-10-11 21:22:54] -rw-r--r--. 1 boincer umatlas     21208 Oct 11 21:22 stderr.txt
[2025-10-11 21:22:54] HITS file was successfully produced:
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas 189120012 Oct 11 21:19 shared/HITS.pool.root.1
[2025-10-11 21:22:54]  *** Contents of shared directory: ***
[2025-10-11 21:22:54] total 404232
[2025-10-11 21:22:54] -rw-r--r--. 2 boincer umatlas 220389332 Oct 11 13:39 ATLAS.root_0
[2025-10-11 21:22:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:39 start_atlas.sh
[2025-10-11 21:22:54] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 13:39 input.tar.gz
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas 189120012 Oct 11 21:19 HITS.pool.root.1
[2025-10-11 21:22:54] -rw-------. 1 boincer umatlas   3829760 Oct 11 21:22 result.tar.gz
21:22:56 (3699172): run_atlas exited; CPU time 49878.499577
21:22:56 (3699172): called boinc_finish(0)

</stderr_txt>
]]>

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