Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:39:27 (32367): wrapper (7.7.26015): starting
13:39:27 (32367): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 13:39:27] Arguments: --nthreads 8
[2025-10-11 13:39:27] Threads: 8
[2025-10-11 13:39:27] Checking for CVMFS
[2025-10-11 13:39:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:39:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:39:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:39:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:39:28] 2.11.2.0 2787 95622 78176 151591 0 56 13340702 20275201 1 130560 2 47960167 99.988 3036555 18517 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 13:39:28] CVMFS is ok
[2025-10-11 13:39:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:39:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:39:28] Further information can be found at the LHC@home message board.
[2025-10-11 13:39:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:39:28] Checking for apptainer binary...
[2025-10-11 13:39:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:39:28] Running /usr/bin/apptainer --version
[2025-10-11 13:39:28] apptainer version 1.3.2-1.el7
[2025-10-11 13:39:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:39:29] c-115-2.aglt2.org
[2025-10-11 13:39:29] apptainer works
[2025-10-11 13:39:29] Set ATHENA_PROC_NUMBER=8
[2025-10-11 13:39:29] Set ATHENA_CORE_NUMBER=8
[2025-10-11 13:39:29] Starting ATLAS job with PandaID=6838366567
[2025-10-11 13:39:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:28:03]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:28:03] 2025-10-11 19:27:16,832 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 15:28:03] 2025-10-11 19:27:16,832 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 15:28:03] 2025-10-11 19:27:16,832 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:28:03] 2025-10-11 19:27:16,832 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:28:03] 2025-10-11 19:27:16,835 | INFO     | fitting pss+swap vs Time
[2025-10-11 15:28:03] 2025-10-11 19:27:16,836 | INFO     | sum of square deviations: 369281342.5
[2025-10-11 15:28:03] 2025-10-11 19:27:16,836 | INFO     | sum of deviations: -786697479.9999981
[2025-10-11 15:28:03] 2025-10-11 19:27:16,836 | INFO     | mean x: 1760207619.5
[2025-10-11 15:28:03] 2025-10-11 19:27:16,836 | INFO     | mean y: 2501910.4716981133
[2025-10-11 15:28:03] 2025-10-11 19:27:16,837 | INFO     | -- intersect: 3752355312.657717
[2025-10-11 15:28:03] 2025-10-11 19:27:16,837 | INFO     | intersect: 3752355312.657717
[2025-10-11 15:28:03] 2025-10-11 19:27:16,837 | INFO     | chi2: 2.2639337169709774
[2025-10-11 15:28:03] 2025-10-11 19:27:16,837 | INFO     | sum of square deviations: 319447850.0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,838 | INFO     | sum of deviations: 6174263718.0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,838 | INFO     | mean x: 1760207467.0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,838 | INFO     | mean y: 2522388.900990099
[2025-10-11 15:28:03] 2025-10-11 19:27:16,838 | INFO     | -- intersect: -34018633488.81358
[2025-10-11 15:28:03] 2025-10-11 19:27:16,838 | INFO     | intersect: -34018633488.81358
[2025-10-11 15:28:03] 2025-10-11 19:27:16,838 | INFO     | chi2: 1.5015944908981753
[2025-10-11 15:28:03] 2025-10-11 19:27:16,838 | INFO     | current chi2=1.5015944908981753 (change=33.67321314922467 %)
[2025-10-11 15:28:03] 2025-10-11 19:27:16,839 | INFO     | sum of square deviations: 274312120.0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,839 | INFO     | sum of deviations: 5942743311.5
[2025-10-11 15:28:03] 2025-10-11 19:27:16,839 | INFO     | mean x: 1760207314.5
[2025-10-11 15:28:03] 2025-10-11 19:27:16,839 | INFO     | mean y: 2521606.03125
[2025-10-11 15:28:03] 2025-10-11 19:27:16,839 | INFO     | -- intersect: -38130901901.097244
[2025-10-11 15:28:03] 2025-10-11 19:27:16,840 | INFO     | intersect: -38130901901.097244
[2025-10-11 15:28:03] 2025-10-11 19:27:16,840 | INFO     | chi2: 1.5048659697627167
[2025-10-11 15:28:03] 2025-10-11 19:27:16,840 | INFO     | current chi2=1.5048659697627167 (change=-0.21786699967076664 %)
[2025-10-11 15:28:03] 2025-10-11 19:27:16,840 | INFO     | right removable region: 95
[2025-10-11 15:28:03] 2025-10-11 19:27:16,840 | INFO     | sum of square deviations: 319447850.0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,841 | INFO     | sum of deviations: -15443568738.0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,841 | INFO     | mean x: 1760207772.0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,841 | INFO     | mean y: 2545719.297029703
[2025-10-11 15:28:03] 2025-10-11 19:27:16,841 | INFO     | -- intersect: 85099032422.97598
[2025-10-11 15:28:03] 2025-10-11 19:27:16,841 | INFO     | intersect: 85099032422.97598
[2025-10-11 15:28:03] 2025-10-11 19:27:16,841 | INFO     | chi2: 0.9156487252020438
[2025-10-11 15:28:03] 2025-10-11 19:27:16,842 | INFO     | current chi2=0.9156487252020438 (change=59.55496760624543 %)
[2025-10-11 15:28:03] 2025-10-11 19:27:16,842 | INFO     | sum of square deviations: 274312120.0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,842 | INFO     | sum of deviations: -14284525611.0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,842 | INFO     | mean x: 1760207924.5
[2025-10-11 15:28:03] 2025-10-11 19:27:16,842 | INFO     | mean y: 2541599.1875
[2025-10-11 15:28:03] 2025-10-11 19:27:16,842 | INFO     | -- intersect: 91663585151.34773
[2025-10-11 15:28:03] 2025-10-11 19:27:16,843 | INFO     | intersect: 91663585151.34773
[2025-10-11 15:28:03] 2025-10-11 19:27:16,843 | INFO     | chi2: 0.8999841261179439
[2025-10-11 15:28:03] 2025-10-11 19:27:16,843 | INFO     | current chi2=0.8999841261179439 (change=1.7107651278216327 %)
[2025-10-11 15:28:03] 2025-10-11 19:27:16,843 | INFO     | left removable region: 20
[2025-10-11 15:28:03] 2025-10-11 19:27:16,843 | INFO     | sum of square deviations: 130793150.0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,844 | INFO     | sum of deviations: -1157297794.9999995
[2025-10-11 15:28:03] 2025-10-11 19:27:16,844 | INFO     | mean x: 1760207894.0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,844 | INFO     | mean y: 2539007.3733333335
[2025-10-11 15:28:03] 2025-10-11 19:27:16,844 | INFO     | -- intersect: 15577396822.693117
[2025-10-11 15:28:03] 2025-10-11 19:27:16,844 | INFO     | intersect: 15577396822.693117
[2025-10-11 15:28:03] 2025-10-11 19:27:16,844 | INFO     | chi2: 0.04500629099344848
[2025-10-11 15:28:03] 2025-10-11 19:27:16,844 | INFO     | -- intersect: 15577396822.693117
[2025-10-11 15:28:03] 2025-10-11 19:27:16,845 | INFO     | current memory leak: -8.85 B/s (using 75 data points, chi2=0.05)
[2025-10-11 15:28:03] 2025-10-11 19:27:16,845 | INFO     | could have reported an average CPU frequency of 2085 MHz (7 samples)
[2025-10-11 15:28:03] 2025-10-11 19:27:16,845 | INFO     | ..............................
[2025-10-11 15:28:03] 2025-10-11 19:27:16,845 | INFO     | . Timing measurements:
[2025-10-11 15:28:03] 2025-10-11 19:27:16,845 | INFO     | . get job = 0 s
[2025-10-11 15:28:03] 2025-10-11 19:27:16,845 | INFO     | . initial setup = 2 s
[2025-10-11 15:28:03] 2025-10-11 19:27:16,845 | INFO     | . payload setup = 8 s
[2025-10-11 15:28:03] 2025-10-11 19:27:16,845 | INFO     | . stage-in = 0 s
[2025-10-11 15:28:03] 2025-10-11 19:27:16,846 | INFO     | . payload execution = 6411 s
[2025-10-11 15:28:03] 2025-10-11 19:27:16,846 | INFO     | . stage-out = 0 s
[2025-10-11 15:28:03] 2025-10-11 19:27:16,846 | INFO     | . log creation = 0 s
[2025-10-11 15:28:03] 2025-10-11 19:27:16,846 | INFO     | ..............................
[2025-10-11 15:28:03] 2025-10-11 19:27:16,928 | INFO     | 
[2025-10-11 15:28:03] 2025-10-11 19:27:16,929 | INFO     | job summary report
[2025-10-11 15:28:03] 2025-10-11 19:27:16,929 | INFO     | --------------------------------------------------
[2025-10-11 15:28:03] 2025-10-11 19:27:16,929 | INFO     | PanDA job id: 6838366567
[2025-10-11 15:28:03] 2025-10-11 19:27:16,929 | INFO     | task id: 46676269
[2025-10-11 15:28:03] 2025-10-11 19:27:16,929 | INFO     | errors: (none)
[2025-10-11 15:28:03] 2025-10-11 19:27:16,930 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:28:03] 2025-10-11 19:27:16,930 | INFO     | pilot state: finished 
[2025-10-11 15:28:03] 2025-10-11 19:27:16,930 | INFO     | transexitcode: 0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,930 | INFO     | exeerrorcode: 0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,930 | INFO     | exeerrordiag: 
[2025-10-11 15:28:03] 2025-10-11 19:27:16,930 | INFO     | exitcode: 0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,931 | INFO     | exitmsg: OK
[2025-10-11 15:28:03] 2025-10-11 19:27:16,931 | INFO     | cpuconsumptiontime: 47302 s
[2025-10-11 15:28:03] 2025-10-11 19:27:16,931 | INFO     | nevents: 400
[2025-10-11 15:28:03] 2025-10-11 19:27:16,931 | INFO     | neventsw: 0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,931 | INFO     | pid: 10365
[2025-10-11 15:28:03] 2025-10-11 19:27:16,932 | INFO     | pgrp: 10365
[2025-10-11 15:28:03] 2025-10-11 19:27:16,932 | INFO     | corecount: 8
[2025-10-11 15:28:03] 2025-10-11 19:27:16,932 | INFO     | event service: False
[2025-10-11 15:28:03] 2025-10-11 19:27:16,932 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 6423: 2376204, 6425: 2385202, 6426: 2385386, 6433: 2385580}
[2025-10-11 15:28:03] 2025-10-11 19:27:16,932 | INFO     | --------------------------------------------------
[2025-10-11 15:28:03] 2025-10-11 19:27:16,932 | INFO     | 
[2025-10-11 15:28:03] 2025-10-11 19:27:16,933 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 15:28:03] 2025-10-11 19:27:16,961 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,961 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,962 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,962 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,963 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,963 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,963 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,963 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,963 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,964 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,964 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,964 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,964 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,964 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:28:03] 2025-10-11 19:27:16,965 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,965 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:28:03] 2025-10-11 19:27:16,965 | INFO     | job 6838366567 has completed (purged errors)
[2025-10-11 15:28:03] 2025-10-11 19:27:16,965 | INFO     | overall cleanup function is called
[2025-10-11 15:28:03] 2025-10-11 19:27:17,968 | INFO     | --- collectZombieJob: --- 10, [10365]
[2025-10-11 15:28:03] 2025-10-11 19:27:17,969 | INFO     | zombie collector waiting for pid 10365
[2025-10-11 15:28:03] 2025-10-11 19:27:17,969 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:28:03] 2025-10-11 19:27:17,969 | INFO     | collected zombie processes
[2025-10-11 15:28:03] 2025-10-11 19:27:17,969 | INFO     | will attempt to kill all subprocesses of pid=10365
[2025-10-11 15:28:03] 2025-10-11 19:27:18,055 | INFO     | process IDs to be killed: [10365] (in reverse order)
[2025-10-11 15:28:03] 2025-10-11 19:27:18,112 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:28:03] 2025-10-11 19:27:18,113 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:28:03] 2025-10-11 19:27:18,117 | INFO     | did not find any defunct processes belonging to 10365
[2025-10-11 15:28:03] 2025-10-11 19:27:18,121 | INFO     | did not find any defunct processes belonging to 10365
[2025-10-11 15:28:03] 2025-10-11 19:27:18,121 | INFO     | ready for new job
[2025-10-11 15:28:03] 2025-10-11 19:27:18,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:28:03] 2025-10-11 19:27:18,123 | INFO     | ***************************************
[2025-10-11 15:28:03] 2025-10-11 19:27:18,123 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:28:03] 2025-10-11 19:27:18,123 | INFO     | ***************************************
[2025-10-11 15:28:03] 2025-10-11 19:27:18,124 | INFO     | 
[2025-10-11 15:28:03] 2025-10-11 19:27:18,124 | INFO     | architecture information:
[2025-10-11 15:28:03] 2025-10-11 19:27:18,125 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:28:03] 2025-10-11 19:27:18,144 | INFO     | cat /etc/os-release:
[2025-10-11 15:28:03] NAME="CentOS Linux"
[2025-10-11 15:28:03] VERSION="7 (Core)"
[2025-10-11 15:28:03] ID="centos"
[2025-10-11 15:28:03] ID_LIKE="rhel fedora"
[2025-10-11 15:28:03] VERSION_ID="7"
[2025-10-11 15:28:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:28:03] ANSI_COLOR="0;31"
[2025-10-11 15:28:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:28:03] HOME_URL="https://www.centos.org/"
[2025-10-11 15:28:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:28:03] 
[2025-10-11 15:28:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:28:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:28:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:28:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:28:03] 
[2025-10-11 15:28:03] 2025-10-11 19:27:18,145 | INFO     | ***************************************
[2025-10-11 15:28:03] 2025-10-11 19:27:18,647 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 15:28:03] 2025-10-11 19:27:18,668 | INFO     | sufficient remaining disk space (18593349632 B)
[2025-10-11 15:28:03] 2025-10-11 19:27:18,669 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:28:03] 2025-10-11 19:27:18,669 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:28:03] 2025-10-11 19:27:18,669 | INFO     | update_server=False
[2025-10-11 15:28:03] 2025-10-11 19:27:18,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:28:03] 2025-10-11 19:27:18,670 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:28:03] 2025-10-11 19:27:18,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:28:03] 2025-10-11 19:27:18,670 | INFO     | aborting loop
[2025-10-11 15:28:03] 2025-10-11 19:27:19,219 | INFO     | all job control threads have been joined
[2025-10-11 15:28:03] 2025-10-11 19:27:19,302 | INFO     | all data control threads have been joined
[2025-10-11 15:28:03] 2025-10-11 19:27:19,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:28:03] 2025-10-11 19:27:19,675 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:19,676 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:19,677 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:19,796 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:19,799 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:19,930 | INFO     | all payload control threads have been joined
[2025-10-11 15:28:03] 2025-10-11 19:27:20,225 | INFO     | [job] control thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:20,302 | INFO     | [data] control thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:20,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:28:03] 2025-10-11 19:27:20,598 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:20,683 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:20,692 | INFO     | [job] validate thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:20,752 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:20,887 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:20,936 | INFO     | [payload] control thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:21,170 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:21,470 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:24,408 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:28:03] 2025-10-11 19:27:49,785 | INFO     | PID=3697 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 15:28:03] 2025-10-11 19:27:49,785 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:28:03] 2025-10-11 19:27:49,785 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:28:03] 2025-10-11 19:27:49,785 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:28:03] 2025-10-11 19:27:56,841 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:28:03] 2025-10-11 19:27:57,781 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140134303242048)>', '<ExcThread(monitor, started 140132896204544)>']
[2025-10-11 15:28:03] 2025-10-11 19:27:57,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:28:03] 2025-10-11 19:27:57,827 | INFO     | [monitor] control thread has ended
[2025-10-11 15:28:03] 2025-10-11 19:28:02,806 | INFO     | all workflow threads have been joined
[2025-10-11 15:28:03] 2025-10-11 19:28:02,806 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:28:03] 2025-10-11 19:28:02,807 | INFO     | traces error code: 0
[2025-10-11 15:28:03] 2025-10-11 19:28:02,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:28:03] 2025-10-11 19:28:02,900 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:28:03] 2025-10-11 19:28:02,905 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:28:03] 2025-10-11 19:28:02,910 [wrapper] pilotpid: 3697
[2025-10-11 15:28:03] 2025-10-11 19:28:02,915 [wrapper] Pilot exit status: 0
[2025-10-11 15:28:03] 2025-10-11 19:28:02,934 [wrapper] pandaids: 6838366567
[2025-10-11 15:28:03] 2025-10-11 19:28:02,981 [wrapper] cleanup supervisor_pilot 19763 3698
[2025-10-11 15:28:03] 2025-10-11 19:28:02,986 [wrapper] Test setup, not cleaning
[2025-10-11 15:28:03] 2025-10-11 19:28:02,990 [wrapper] apfmon messages muted
[2025-10-11 15:28:03] 2025-10-11 19:28:02,994 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:28:03] 2025-10-11 19:28:02,999 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:28:03]  *** Error codes and diagnostics ***
[2025-10-11 15:28:03]     "exeErrorCode": 0,
[2025-10-11 15:28:03]     "exeErrorDiag": "",
[2025-10-11 15:28:03]     "pilotErrorCode": 0,
[2025-10-11 15:28:03]     "pilotErrorDiag": "",
[2025-10-11 15:28:03]  *** Listing of results directory ***
[2025-10-11 15:28:03] total 409016
[2025-10-11 15:28:03] -rwx------ 1 boincer umatlas     36292 Oct 11 08:28 runpilot2-wrapper.sh
[2025-10-11 15:28:03] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 08:28 queuedata.json
[2025-10-11 15:28:03] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 08:28 pilot3.tar.gz
[2025-10-11 15:28:03] -rw-r--r-- 1 boincer umatlas       100 Oct 11 13:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:28:03] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 13:39 run_atlas
[2025-10-11 15:28:03] -rw-r--r-- 1 boincer umatlas       105 Oct 11 13:39 job.xml
[2025-10-11 15:28:03] -rw-r--r-- 2 boincer umatlas 219886090 Oct 11 13:39 EVNT.46676267._002306.pool.root.1
[2025-10-11 15:28:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 13:39 start_atlas.sh
[2025-10-11 15:28:03] drwxrwx--x 2 boincer umatlas      4096 Oct 11 13:39 shared
[2025-10-11 15:28:03] -rw-r--r-- 2 boincer umatlas    569670 Oct 11 13:39 input.tar.gz
[2025-10-11 15:28:03] -rw-r--r-- 1 boincer umatlas         0 Oct 11 13:39 boinc_lockfile
[2025-10-11 15:28:03] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 13:39 pandaJob.out
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas    975520 Oct 11 13:39 agis_schedconf.cvmfs.json
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas   1560580 Oct 11 13:39 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:28:03] drwx------ 5 boincer umatlas      4096 Oct 11 13:39 pilot3
[2025-10-11 15:28:03] -rw-r--r-- 1 boincer umatlas      5909 Oct 11 15:21 init_data.xml
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas 192495891 Oct 11 15:26 HITS.46676269._057450.pool.root.1
[2025-10-11 15:28:03] -rw-r--r-- 1 boincer umatlas       529 Oct 11 15:26 boinc_task_state.xml
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas      1051 Oct 11 15:27 memory_monitor_summary.json
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas    358330 Oct 11 15:27 log.46676269._057450.job.log.tgz.1
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas        95 Oct 11 15:27 pilot_heartbeat.json
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas      7862 Oct 11 15:27 heartbeat.json
[2025-10-11 15:28:03] -rw-r--r-- 1 boincer umatlas        27 Oct 11 15:27 wrapper_checkpoint.txt
[2025-10-11 15:28:03] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 15:27 boinc_mmap_file
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas      4745 Oct 11 15:28 pilotlog.txt
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas    914161 Oct 11 15:28 log.46676269._057450.job.log.1
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas       357 Oct 11 15:28 output.list
[2025-10-11 15:28:03] -rw-r--r-- 1 boincer umatlas       620 Oct 11 15:28 runtime_log
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas   1290240 Oct 11 15:28 result.tar.gz
[2025-10-11 15:28:03] -rw-r--r-- 1 boincer umatlas      8698 Oct 11 15:28 runtime_log.err
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas       657 Oct 11 15:28 aMjNDm4snR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvqRMDm1Zt0hm.diag
[2025-10-11 15:28:03] -rw-r--r-- 1 boincer umatlas     20847 Oct 11 15:28 stderr.txt
[2025-10-11 15:28:03] HITS file was successfully produced:
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas 192495891 Oct 11 15:26 shared/HITS.pool.root.1
[2025-10-11 15:28:03]  *** Contents of shared directory: ***
[2025-10-11 15:28:03] total 404564
[2025-10-11 15:28:03] -rw-r--r-- 2 boincer umatlas 219886090 Oct 11 13:39 ATLAS.root_0
[2025-10-11 15:28:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 13:39 start_atlas.sh
[2025-10-11 15:28:03] -rw-r--r-- 2 boincer umatlas    569670 Oct 11 13:39 input.tar.gz
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas 192495891 Oct 11 15:26 HITS.pool.root.1
[2025-10-11 15:28:03] -rw------- 1 boincer umatlas   1290240 Oct 11 15:28 result.tar.gz
15:28:04 (32367): run_atlas exited; CPU time 47312.388582
15:28:04 (32367): called boinc_finish(0)

</stderr_txt>
]]>

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