Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:51:13 (3006752): wrapper (7.7.26015): starting
13:51:13 (3006752): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 13:51:14] Arguments: --nthreads 4
[2025-10-13 13:51:14] Threads: 4
[2025-10-13 13:51:14] Checking for CVMFS
[2025-10-13 13:51:14] No cvmfs_config command found, will try listing directly
[2025-10-13 13:51:14] CVMFS is ok
[2025-10-13 13:51:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 13:51:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 13:51:14] Further information can be found at the LHC@home message board.
[2025-10-13 13:51:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:51:14] Checking for apptainer binary...
[2025-10-13 13:51:14] which: no apptainer in ((null))
[2025-10-13 13:51:14] apptainer is not installed, using version from CVMFS
[2025-10-13 13:51:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:51:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-10-13 13:51:14] apptainer works
[2025-10-13 13:51:14] Set ATHENA_PROC_NUMBER=4
[2025-10-13 13:51:14] Set ATHENA_CORE_NUMBER=4
[2025-10-13 13:51:14] Starting ATLAS job with PandaID=6838231929
[2025-10-13 13:51:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:44:42]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:44:42] 2025-10-13 14:35:49,015 | INFO     | mean x: 1760361222.5
[2025-10-13 16:44:42] 2025-10-13 14:35:49,015 | INFO     | mean y: 2305052.75308642
[2025-10-13 16:44:42] 2025-10-13 14:35:49,015 | INFO     | -- intersect: -6239981552.822592
[2025-10-13 16:44:42] 2025-10-13 14:35:49,015 | INFO     | intersect: -6239981552.822592
[2025-10-13 16:44:42] 2025-10-13 14:35:49,016 | INFO     | chi2: 2.0991456428645443
[2025-10-13 16:44:42] 2025-10-13 14:35:49,016 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 16:44:42] 2025-10-13 14:35:49,017 | INFO     | sum of deviations: 13451717560.000002
[2025-10-13 16:44:42] 2025-10-13 14:35:49,017 | INFO     | mean x: 1760361070.0
[2025-10-13 16:44:42] 2025-10-13 14:35:49,017 | INFO     | mean y: 2316065.8598726112
[2025-10-13 16:44:42] 2025-10-13 14:35:49,017 | INFO     | -- intersect: -19731893416.975723
[2025-10-13 16:44:42] 2025-10-13 14:35:49,018 | INFO     | intersect: -19731893416.975723
[2025-10-13 16:44:42] 2025-10-13 14:35:49,018 | INFO     | chi2: 1.444793995726293
[2025-10-13 16:44:42] 2025-10-13 14:35:49,018 | INFO     | current chi2=1.444793995726293 (change=31.172284274916123 %)
[2025-10-13 16:44:42] 2025-10-13 14:35:49,018 | INFO     | sum of square deviations: 1088905998.0
[2025-10-13 16:44:42] 2025-10-13 14:35:49,019 | INFO     | sum of deviations: 12831681565.5
[2025-10-13 16:44:42] 2025-10-13 14:35:49,019 | INFO     | mean x: 1760360917.5
[2025-10-13 16:44:42] 2025-10-13 14:35:49,020 | INFO     | mean y: 2315214.125
[2025-10-13 16:44:42] 2025-10-13 14:35:49,020 | INFO     | -- intersect: -20741799314.76881
[2025-10-13 16:44:42] 2025-10-13 14:35:49,020 | INFO     | intersect: -20741799314.76881
[2025-10-13 16:44:42] 2025-10-13 14:35:49,020 | INFO     | chi2: 1.446190126086586
[2025-10-13 16:44:42] 2025-10-13 14:35:49,020 | INFO     | current chi2=1.446190126086586 (change=-0.09663179418122704 %)
[2025-10-13 16:44:42] 2025-10-13 14:35:49,020 | INFO     | right removable region: 151
[2025-10-13 16:44:42] 2025-10-13 14:35:49,020 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 16:44:42] 2025-10-13 14:35:49,021 | INFO     | sum of deviations: -16887293131.0
[2025-10-13 16:44:42] 2025-10-13 14:35:49,021 | INFO     | mean x: 1760361375.0
[2025-10-13 16:44:42] 2025-10-13 14:35:49,022 | INFO     | mean y: 2332414.541401274
[2025-10-13 16:44:42] 2025-10-13 14:35:49,022 | INFO     | -- intersect: 24776673423.329884
[2025-10-13 16:44:42] 2025-10-13 14:35:49,022 | INFO     | intersect: 24776673423.329884
[2025-10-13 16:44:42] 2025-10-13 14:35:49,022 | INFO     | chi2: 0.709401041530251
[2025-10-13 16:44:42] 2025-10-13 14:35:49,022 | INFO     | current chi2=0.709401041530251 (change=66.20524907637255 %)
[2025-10-13 16:44:42] 2025-10-13 14:35:49,022 | INFO     | sum of square deviations: 1088905998.0
[2025-10-13 16:44:42] 2025-10-13 14:35:49,023 | INFO     | sum of deviations: -14926591968.999998
[2025-10-13 16:44:42] 2025-10-13 14:35:49,023 | INFO     | mean x: 1760361527.5
[2025-10-13 16:44:42] 2025-10-13 14:35:49,023 | INFO     | mean y: 2329714.197368421
[2025-10-13 16:44:42] 2025-10-13 14:35:49,023 | INFO     | -- intersect: 24133153024.179787
[2025-10-13 16:44:42] 2025-10-13 14:35:49,024 | INFO     | intersect: 24133153024.179787
[2025-10-13 16:44:42] 2025-10-13 14:35:49,024 | INFO     | chi2: 0.7083540769229502
[2025-10-13 16:44:42] 2025-10-13 14:35:49,024 | INFO     | current chi2=0.7083540769229502 (change=0.14758430647950474 %)
[2025-10-13 16:44:42] 2025-10-13 14:35:49,024 | INFO     | left removable region: 20
[2025-10-13 16:44:42] 2025-10-13 14:35:49,024 | INFO     | sum of square deviations: 697054930.0
[2025-10-13 16:44:42] 2025-10-13 14:35:49,025 | INFO     | sum of deviations: -1475388638.9999993
[2025-10-13 16:44:42] 2025-10-13 14:35:49,025 | INFO     | mean x: 1760361497.0
[2025-10-13 16:44:42] 2025-10-13 14:35:49,025 | INFO     | mean y: 2334103.526717557
[2025-10-13 16:44:42] 2025-10-13 14:35:49,025 | INFO     | -- intersect: 3728320738.7648206
[2025-10-13 16:44:42] 2025-10-13 14:35:49,025 | INFO     | intersect: 3728320738.7648206
[2025-10-13 16:44:42] 2025-10-13 14:35:49,026 | INFO     | chi2: 0.014960124828826343
[2025-10-13 16:44:42] 2025-10-13 14:35:49,026 | INFO     | -- intersect: 3728320738.7648206
[2025-10-13 16:44:42] 2025-10-13 14:35:49,026 | INFO     | current memory leak: -2.12 B/s (using 131 data points, chi2=0.01)
[2025-10-13 16:44:42] 2025-10-13 14:35:49,026 | INFO     | could have reported an average CPU frequency of 2622 MHz (9 samples)
[2025-10-13 16:44:42] 2025-10-13 14:35:49,027 | INFO     | ..............................
[2025-10-13 16:44:42] 2025-10-13 14:35:49,027 | INFO     | . Timing measurements:
[2025-10-13 16:44:42] 2025-10-13 14:35:49,027 | INFO     | . get job = 0 s
[2025-10-13 16:44:42] 2025-10-13 14:35:49,027 | INFO     | . initial setup = 1 s
[2025-10-13 16:44:42] 2025-10-13 14:35:49,027 | INFO     | . payload setup = 6 s
[2025-10-13 16:44:42] 2025-10-13 14:35:49,027 | INFO     | . stage-in = 0 s
[2025-10-13 16:44:42] 2025-10-13 14:35:49,027 | INFO     | . payload execution = 9832 s
[2025-10-13 16:44:42] 2025-10-13 14:35:49,027 | INFO     | . stage-out = 0 s
[2025-10-13 16:44:42] 2025-10-13 14:35:49,027 | INFO     | . log creation = 0 s
[2025-10-13 16:44:42] 2025-10-13 14:35:49,027 | INFO     | ..............................
[2025-10-13 16:44:42] 2025-10-13 14:35:49,583 | INFO     | 
[2025-10-13 16:44:42] 2025-10-13 14:35:49,584 | INFO     | job summary report
[2025-10-13 16:44:42] 2025-10-13 14:35:49,584 | INFO     | --------------------------------------------------
[2025-10-13 16:44:42] 2025-10-13 14:35:49,584 | INFO     | PanDA job id: 6838231929
[2025-10-13 16:44:42] 2025-10-13 14:35:49,584 | INFO     | task id: 46676269
[2025-10-13 16:44:42] 2025-10-13 14:35:49,584 | INFO     | errors: (none)
[2025-10-13 16:44:42] 2025-10-13 14:35:49,584 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:44:42] 2025-10-13 14:35:49,584 | INFO     | pilot state: finished 
[2025-10-13 16:44:42] 2025-10-13 14:35:49,584 | INFO     | transexitcode: 0
[2025-10-13 16:44:42] 2025-10-13 14:35:49,584 | INFO     | exeerrorcode: 0
[2025-10-13 16:44:42] 2025-10-13 14:35:49,584 | INFO     | exeerrordiag: 
[2025-10-13 16:44:42] 2025-10-13 14:35:49,584 | INFO     | exitcode: 0
[2025-10-13 16:44:42] 2025-10-13 14:35:49,584 | INFO     | exitmsg: OK
[2025-10-13 16:44:42] 2025-10-13 14:35:49,585 | INFO     | cpuconsumptiontime: 37755 s
[2025-10-13 16:44:42] 2025-10-13 14:35:49,585 | INFO     | nevents: 400
[2025-10-13 16:44:42] 2025-10-13 14:35:49,585 | INFO     | neventsw: 0
[2025-10-13 16:44:42] 2025-10-13 14:35:49,585 | INFO     | pid: 3017595
[2025-10-13 16:44:42] 2025-10-13 14:35:49,585 | INFO     | pgrp: 3017595
[2025-10-13 16:44:42] 2025-10-13 14:35:49,585 | INFO     | corecount: 4
[2025-10-13 16:44:42] 2025-10-13 14:35:49,585 | INFO     | event service: False
[2025-10-13 16:44:42] 2025-10-13 14:35:49,585 | INFO     | sizes: {0: 2348641, 1: 2348896, 6: 2349158, 12: 2349186, 9843: 2377824, 9844: 2387028, 9848: 2387230}
[2025-10-13 16:44:42] 2025-10-13 14:35:49,585 | INFO     | --------------------------------------------------
[2025-10-13 16:44:42] 2025-10-13 14:35:49,585 | INFO     | 
[2025-10-13 16:44:42] 2025-10-13 14:35:49,585 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-10-13 16:44:42] 2025-10-13 14:35:49,607 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,607 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,607 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,607 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,608 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,608 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,608 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,608 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,608 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,608 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:44:42] 2025-10-13 14:35:49,608 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,608 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:44:42] 2025-10-13 14:35:49,609 | INFO     | job 6838231929 has completed (purged errors)
[2025-10-13 16:44:42] 2025-10-13 14:35:49,609 | INFO     | overall cleanup function is called
[2025-10-13 16:44:42] 2025-10-13 14:35:50,016 | WARNING  | process 3017595 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 16:44:42] 2025-10-13 14:35:50,313 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:44:42] 2025-10-13 14:35:50,617 | INFO     | --- collectZombieJob: --- 10, [3017595]
[2025-10-13 16:44:42] 2025-10-13 14:35:50,617 | INFO     | zombie collector waiting for pid 3017595
[2025-10-13 16:44:42] 2025-10-13 14:35:50,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:44:42] 2025-10-13 14:35:50,617 | INFO     | collected zombie processes
[2025-10-13 16:44:42] 2025-10-13 14:35:50,618 | INFO     | will attempt to kill all subprocesses of pid=3017595
[2025-10-13 16:44:42] 2025-10-13 14:35:50,809 | INFO     | number of running child processes to parent process 3017595: 1
[2025-10-13 16:44:42] 2025-10-13 14:35:50,810 | INFO     | maximum number of monitored processes: 6
[2025-10-13 16:44:42] 2025-10-13 14:35:50,810 | INFO     | aborting job monitoring since job object (job id=6838231929) has expired
[2025-10-13 16:44:42] 2025-10-13 14:35:51,103 | INFO     | process IDs to be killed: [3017595] (in reverse order)
[2025-10-13 16:44:42] 2025-10-13 14:35:51,214 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:44:42] 2025-10-13 14:35:51,214 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:44:42] 2025-10-13 14:35:51,227 | INFO     | did not find any defunct processes belonging to 3017595
[2025-10-13 16:44:42] 2025-10-13 14:35:51,240 | INFO     | did not find any defunct processes belonging to 3017595
[2025-10-13 16:44:42] 2025-10-13 14:35:51,240 | INFO     | ready for new job
[2025-10-13 16:44:42] 2025-10-13 14:35:51,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:44:42] 2025-10-13 14:35:51,242 | INFO     | ***************************************
[2025-10-13 16:44:42] 2025-10-13 14:35:51,243 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:44:42] 2025-10-13 14:35:51,243 | INFO     | ***************************************
[2025-10-13 16:44:42] 2025-10-13 14:35:51,243 | INFO     | 
[2025-10-13 16:44:42] 2025-10-13 14:35:51,246 | INFO     | architecture information:
[2025-10-13 16:44:42] 2025-10-13 14:35:51,247 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:44:42] 2025-10-13 14:35:51,262 | INFO     | cat /etc/os-release:
[2025-10-13 16:44:42] NAME="CentOS Linux"
[2025-10-13 16:44:42] VERSION="7 (Core)"
[2025-10-13 16:44:42] ID="centos"
[2025-10-13 16:44:42] ID_LIKE="rhel fedora"
[2025-10-13 16:44:42] VERSION_ID="7"
[2025-10-13 16:44:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:44:42] ANSI_COLOR="0;31"
[2025-10-13 16:44:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:44:42] HOME_URL="https://www.centos.org/"
[2025-10-13 16:44:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:44:42] 
[2025-10-13 16:44:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:44:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:44:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:44:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:44:42] 
[2025-10-13 16:44:42] 2025-10-13 14:35:51,263 | INFO     | ***************************************
[2025-10-13 16:44:42] 2025-10-13 14:35:51,766 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-10-13 16:44:42] 2025-10-13 14:35:51,782 | INFO     | sufficient remaining disk space (692566622208 B)
[2025-10-13 16:44:42] 2025-10-13 14:35:51,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:44:42] 2025-10-13 14:35:51,783 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:44:42] 2025-10-13 14:35:51,783 | INFO     | update_server=False
[2025-10-13 16:44:42] 2025-10-13 14:35:51,783 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:44:42] 2025-10-13 14:35:51,783 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:44:42] 2025-10-13 14:35:51,784 | INFO     | will abort loop
[2025-10-13 16:44:42] 2025-10-13 14:35:52,174 | INFO     | all data control threads have been joined
[2025-10-13 16:44:42] 2025-10-13 14:35:52,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:44:42] 2025-10-13 14:35:52,636 | INFO     | all payload control threads have been joined
[2025-10-13 16:44:42] 2025-10-13 14:35:52,787 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:52,788 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:52,829 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:53,021 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:53,177 | INFO     | all job control threads have been joined
[2025-10-13 16:44:42] 2025-10-13 14:35:53,179 | INFO     | [data] control thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:53,444 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:53,641 | INFO     | [payload] control thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:53,654 | INFO     | [job] validate thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:54,021 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:54,134 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:54,137 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:44:42] 2025-10-13 14:35:54,144 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:54,182 | INFO     | [job] control thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:54,380 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:54,452 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:55,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:44:42] 2025-10-13 14:35:55,143 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:35:59,047 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:44:42] 2025-10-13 14:36:21,397 | INFO     | PID=3010695 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 16:44:42] 2025-10-13 14:36:21,398 | INFO     | .. there are 5 such processes running
[2025-10-13 16:44:42] 2025-10-13 14:36:21,399 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:44:42] 2025-10-13 14:36:21,399 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:44:42] 2025-10-13 14:36:21,399 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:44:42] 2025-10-13 14:36:22,739 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-10-13 16:44:42] 2025-10-13 14:36:40,684 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:44:42] 2025-10-13 14:36:42,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22624019081024)>', '<ExcThread(monitor, started 22623775840000)>']
[2025-10-13 16:44:42] 2025-10-13 14:36:43,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:44:42] 2025-10-13 14:36:43,498 | INFO     | [monitor] control thread has ended
[2025-10-13 16:44:42] 2025-10-13 14:36:47,520 | INFO     | all workflow threads have been joined
[2025-10-13 16:44:42] 2025-10-13 14:36:47,520 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:44:42] 2025-10-13 14:36:47,520 | INFO     | traces error code: 0
[2025-10-13 16:44:42] 2025-10-13 14:36:47,520 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:44:42] 2025-10-13 14:36:47,668 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:44:42] 2025-10-13 14:36:47,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:44:42] 2025-10-13 14:36:47,673 [wrapper] pilotpid: 3010695
[2025-10-13 16:44:42] 2025-10-13 14:36:47,675 [wrapper] Pilot exit status: 0
[2025-10-13 16:44:42] 2025-10-13 14:36:47,684 [wrapper] pandaids: 6838231929
[2025-10-13 16:44:42] 2025-10-13 14:36:47,760 [wrapper] cleanup supervisor_pilot 3259609 3010696
[2025-10-13 16:44:42] 2025-10-13 14:36:47,763 [wrapper] Test setup, not cleaning
[2025-10-13 16:44:42] 2025-10-13 14:36:47,766 [wrapper] apfmon messages muted
[2025-10-13 16:44:42] 2025-10-13 14:36:47,768 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:44:42] 2025-10-13 14:36:47,771 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:44:42]  *** Error codes and diagnostics ***
[2025-10-13 16:44:42]     "exeErrorCode": 0,
[2025-10-13 16:44:42]     "exeErrorDiag": "",
[2025-10-13 16:44:42]     "pilotErrorCode": 0,
[2025-10-13 16:44:42]     "pilotErrorDiag": "",
[2025-10-13 16:44:42]  *** Listing of results directory ***
[2025-10-13 16:44:42] total 400684
[2025-10-13 16:44:42] -rw-r--r-- 1 boinc boinc    557409 Oct 11 10:40 pilot3.tar.gz
[2025-10-13 16:44:42] -rw-r--r-- 1 boinc boinc      5112 Oct 11 10:52 queuedata.json
[2025-10-13 16:44:42] -rwx------ 1 boinc boinc     36292 Oct 11 10:53 runpilot2-wrapper.sh
[2025-10-13 16:44:42] -rw-r--r-- 1 boinc boinc       100 Oct 13 13:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:44:42] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 13:51 run_atlas
[2025-10-13 16:44:42] -rw-r--r-- 1 boinc boinc       105 Oct 13 13:51 job.xml
[2025-10-13 16:44:42] -rw-r--r-- 1 boinc boinc      6634 Oct 13 13:51 init_data.xml
[2025-10-13 16:44:42] -rw-r--r-- 2 boinc boinc 219574416 Oct 13 13:51 EVNT.46676267._002189.pool.root.1
[2025-10-13 16:44:42] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:51 start_atlas.sh
[2025-10-13 16:44:42] drwxrwx--x 2 boinc boinc      4096 Oct 13 13:51 shared
[2025-10-13 16:44:42] -rw-r--r-- 2 boinc boinc    569688 Oct 13 13:51 input.tar.gz
[2025-10-13 16:44:42] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:51 boinc_lockfile
[2025-10-13 16:44:42] -rw-r--r-- 1 boinc boinc      2550 Oct 13 13:51 pandaJob.out
[2025-10-13 16:44:42] -rw------- 1 boinc boinc    972497 Oct 13 13:51 agis_schedconf.cvmfs.json
[2025-10-13 16:44:42] -rw------- 1 boinc boinc   1560580 Oct 13 13:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:44:42] drwx------ 5 boinc boinc      4096 Oct 13 13:51 pilot3
[2025-10-13 16:44:42] -rw------- 1 boinc boinc 183339831 Oct 13 16:35 HITS.46676269._054560.pool.root.1
[2025-10-13 16:44:42] -rw-r--r-- 1 boinc boinc       528 Oct 13 16:35 boinc_task_state.xml
[2025-10-13 16:44:42] -rw------- 1 boinc boinc      1031 Oct 13 16:35 memory_monitor_summary.json
[2025-10-13 16:44:42] -rw------- 1 boinc boinc    335070 Oct 13 16:35 log.46676269._054560.job.log.tgz.1
[2025-10-13 16:44:42] -rw------- 1 boinc boinc      7820 Oct 13 16:35 heartbeat.json
[2025-10-13 16:44:42] -rw------- 1 boinc boinc        95 Oct 13 16:36 pilot_heartbeat.json
[2025-10-13 16:44:42] -rw------- 1 boinc boinc      4835 Oct 13 16:36 pilotlog.txt
[2025-10-13 16:44:42] -rw------- 1 boinc boinc   1408012 Oct 13 16:36 log.46676269._054560.job.log.1
[2025-10-13 16:44:42] -rw------- 1 boinc boinc       357 Oct 13 16:36 output.list
[2025-10-13 16:44:42] -rw-r--r-- 1 boinc boinc       620 Oct 13 16:36 runtime_log
[2025-10-13 16:44:42] -rw------- 1 boinc boinc   1761280 Oct 13 16:36 result.tar.gz
[2025-10-13 16:44:42] -rw-r--r-- 1 boinc boinc      9069 Oct 13 16:36 runtime_log.err
[2025-10-13 16:44:42] -rw------- 1 boinc boinc       663 Oct 13 16:36 f8dKDmCXkR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvZRMDmUPINum.diag
[2025-10-13 16:44:42] -rw-r--r-- 1 boinc boinc        26 Oct 13 16:44 wrapper_checkpoint.txt
[2025-10-13 16:44:42] -rw-r--r-- 1 boinc boinc      8192 Oct 13 16:44 boinc_mmap_file
[2025-10-13 16:44:42] -rw-r--r-- 1 boinc boinc     20818 Oct 13 16:44 stderr.txt
[2025-10-13 16:44:42] HITS file was successfully produced:
[2025-10-13 16:44:42] -rw------- 1 boinc boinc 183339831 Oct 13 16:35 shared/HITS.pool.root.1
[2025-10-13 16:44:42]  *** Contents of shared directory: ***
[2025-10-13 16:44:42] total 395780
[2025-10-13 16:44:42] -rw-r--r-- 2 boinc boinc 219574416 Oct 13 13:51 ATLAS.root_0
[2025-10-13 16:44:42] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:51 start_atlas.sh
[2025-10-13 16:44:42] -rw-r--r-- 2 boinc boinc    569688 Oct 13 13:51 input.tar.gz
[2025-10-13 16:44:42] -rw------- 1 boinc boinc 183339831 Oct 13 16:35 HITS.pool.root.1
[2025-10-13 16:44:42] -rw------- 1 boinc boinc   1761280 Oct 13 16:36 result.tar.gz
16:44:43 (3006752): run_atlas exited; CPU time 38128.635046
16:44:43 (3006752): called boinc_finish(0)

</stderr_txt>
]]>

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