Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:33:42 (293956): wrapper (7.7.26015): starting
20:33:42 (293956): wrapper: running run_atlas (--nthreads 6)
[2025-10-14 20:33:42] Arguments: --nthreads 6
[2025-10-14 20:33:42] Threads: 6
[2025-10-14 20:33:42] Checking for CVMFS
[2025-10-14 20:33:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 20:33:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 20:33:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 20:33:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 20:33:42] 2.13.1.0 3910062 915 65156 151696 2 188 30848855 52428801 922 130560 0 1762582 99.995 37176 121 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-14 20:33:42] CVMFS is ok
[2025-10-14 20:33:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 20:33:42] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-14 20:33:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-14 20:33:42] Further information can be found at the LHC@home message board.
[2025-10-14 20:33:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 20:33:42] Checking for apptainer binary...
[2025-10-14 20:33:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 20:33:42] Running /usr/bin/apptainer --version
[2025-10-14 20:33:42] apptainer version 1.4.1-1.el9
[2025-10-14 20:33:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 20:33:42] Atto003
[2025-10-14 20:33:42] apptainer works
[2025-10-14 20:33:42] Set ATHENA_PROC_NUMBER=6
[2025-10-14 20:33:42] Set ATHENA_CORE_NUMBER=6
[2025-10-14 20:33:42] Starting ATLAS job with PandaID=6838364774
[2025-10-14 20:33:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 21:47:13]  *** The last 200 lines of the pilot log: ***
[2025-10-14 21:47:13] 2025-10-14 12:46:35,422 | INFO     | transferring file log.46676269._056355.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6838364774/log.46676269._056355.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-14 21:47:13] 2025-10-14 12:46:35,422 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6838364774/log.46676269._056355.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._056355.job
[2025-10-14 21:47:13] 2025-10-14 12:46:35,428 | INFO     | adding to output.list: log.46676269._056355.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/be/log.46676269._056355.job.log.tg
[2025-10-14 21:47:13] 2025-10-14 12:46:35,429 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 21:47:13] 2025-10-14 12:46:35,429 | INFO     | summary of transferred files:
[2025-10-14 21:47:13] 2025-10-14 12:46:35,429 | INFO     |  -- lfn=log.46676269._056355.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 21:47:13] 2025-10-14 12:46:35,429 | INFO     | stage-out finished correctly
[2025-10-14 21:47:13] 2025-10-14 12:46:35,500 | INFO     | PID=297753 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-14 21:47:13] 2025-10-14 12:46:35,500 | INFO     | .. there are 2 such processes running
[2025-10-14 21:47:13] 2025-10-14 12:46:36,500 | INFO     | time since job start (4365s) is within the limit (172800.0s)
[2025-10-14 21:47:13] 2025-10-14 12:46:36,807 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 21:47:13] 2025-10-14 12:46:38,506 | INFO     | time since job start (4367s) is within the limit (172800.0s)
[2025-10-14 21:47:13] 2025-10-14 12:46:39,522 | INFO     | job 6838364774 has state=finished
[2025-10-14 21:47:13] 2025-10-14 12:46:39,523 | INFO     | preparing for final server update for job 6838364774 in state='finished'
[2025-10-14 21:47:13] 2025-10-14 12:46:39,523 | INFO     | this job has now completed (state=finished)
[2025-10-14 21:47:13] 2025-10-14 12:46:39,523 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 21:47:13] 2025-10-14 12:46:39,523 | INFO     | log transfer has been attempted: DONE
[2025-10-14 21:47:13] 2025-10-14 12:46:39,523 | INFO     | job 6838364774 has finished - writing final server update
[2025-10-14 21:47:13] 2025-10-14 12:46:39,523 | INFO     | total number of processed events: 400 (read)
[2025-10-14 21:47:13] 2025-10-14 12:46:39,524 | INFO     | executing command: lscpu
[2025-10-14 21:47:13] 2025-10-14 12:46:39,535 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 21:47:13] 2025-10-14 12:46:40,508 | INFO     | time since job start (4369s) is within the limit (172800.0s)
[2025-10-14 21:47:13] 2025-10-14 12:46:41,121 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 21:47:13] 2025-10-14 12:46:41,122 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3652.0811875
[2025-10-14 21:47:13] 2025-10-14 12:46:41,123 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6838364774/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 21:47:13] 2025-10-14 12:46:41,123 | INFO     | extracted standard info from prmon json
[2025-10-14 21:47:13] 2025-10-14 12:46:41,123 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 21:47:13] 2025-10-14 12:46:41,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 21:47:13] 2025-10-14 12:46:41,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 21:47:13] 2025-10-14 12:46:41,123 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 21:47:13] 2025-10-14 12:46:41,124 | INFO     | fitting pss+swap vs Time
[2025-10-14 21:47:13] 2025-10-14 12:46:41,124 | INFO     | sum of square deviations: 85136480.0
[2025-10-14 21:47:13] 2025-10-14 12:46:41,124 | INFO     | sum of deviations: -4871212705.999999
[2025-10-14 21:47:13] 2025-10-14 12:46:41,124 | INFO     | mean x: 1760443906.0
[2025-10-14 21:47:13] 2025-10-14 12:46:41,124 | INFO     | mean y: 2576712.0153846154
[2025-10-14 21:47:13] 2025-10-14 12:46:41,124 | INFO     | -- intersect: 100729042301.23715
[2025-10-14 21:47:13] 2025-10-14 12:46:41,124 | INFO     | intersect: 100729042301.23715
[2025-10-14 21:47:13] 2025-10-14 12:46:41,124 | INFO     | chi2: 0.05354311068114085
[2025-10-14 21:47:13] 2025-10-14 12:46:41,124 | INFO     | -- intersect: 100729042301.23715
[2025-10-14 21:47:13] 2025-10-14 12:46:41,124 | INFO     | current memory leak: -57.22 B/s (using 65 data points, chi2=0.05)
[2025-10-14 21:47:13] 2025-10-14 12:46:41,124 | INFO     | could have reported an average CPU frequency of 3757 MHz (6 samples)
[2025-10-14 21:47:13] 2025-10-14 12:46:41,125 | INFO     | ..............................
[2025-10-14 21:47:13] 2025-10-14 12:46:41,125 | INFO     | . Timing measurements:
[2025-10-14 21:47:13] 2025-10-14 12:46:41,125 | INFO     | . get job = 0 s
[2025-10-14 21:47:13] 2025-10-14 12:46:41,125 | INFO     | . initial setup = 5 s
[2025-10-14 21:47:13] 2025-10-14 12:46:41,125 | INFO     | . payload setup = 2 s
[2025-10-14 21:47:13] 2025-10-14 12:46:41,125 | INFO     | . stage-in = 0 s
[2025-10-14 21:47:13] 2025-10-14 12:46:41,125 | INFO     | . payload execution = 4345 s
[2025-10-14 21:47:13] 2025-10-14 12:46:41,125 | INFO     | . stage-out = 0 s
[2025-10-14 21:47:13] 2025-10-14 12:46:41,125 | INFO     | . log creation = 0 s
[2025-10-14 21:47:13] 2025-10-14 12:46:41,125 | INFO     | ..............................
[2025-10-14 21:47:13] 2025-10-14 12:46:41,154 | INFO     | 
[2025-10-14 21:47:13] 2025-10-14 12:46:41,154 | INFO     | job summary report
[2025-10-14 21:47:13] 2025-10-14 12:46:41,154 | INFO     | --------------------------------------------------
[2025-10-14 21:47:13] 2025-10-14 12:46:41,154 | INFO     | PanDA job id: 6838364774
[2025-10-14 21:47:13] 2025-10-14 12:46:41,154 | INFO     | task id: 46676269
[2025-10-14 21:47:13] 2025-10-14 12:46:41,154 | INFO     | errors: (none)
[2025-10-14 21:47:13] 2025-10-14 12:46:41,154 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 21:47:13] 2025-10-14 12:46:41,154 | INFO     | pilot state: finished 
[2025-10-14 21:47:13] 2025-10-14 12:46:41,154 | INFO     | transexitcode: 0
[2025-10-14 21:47:13] 2025-10-14 12:46:41,154 | INFO     | exeerrorcode: 0
[2025-10-14 21:47:13] 2025-10-14 12:46:41,154 | INFO     | exeerrordiag: 
[2025-10-14 21:47:13] 2025-10-14 12:46:41,155 | INFO     | exitcode: 0
[2025-10-14 21:47:13] 2025-10-14 12:46:41,155 | INFO     | exitmsg: OK
[2025-10-14 21:47:13] 2025-10-14 12:46:41,155 | INFO     | cpuconsumptiontime: 23955 s
[2025-10-14 21:47:13] 2025-10-14 12:46:41,155 | INFO     | nevents: 400
[2025-10-14 21:47:13] 2025-10-14 12:46:41,155 | INFO     | neventsw: 0
[2025-10-14 21:47:13] 2025-10-14 12:46:41,155 | INFO     | pid: 304489
[2025-10-14 21:47:13] 2025-10-14 12:46:41,155 | INFO     | pgrp: 304489
[2025-10-14 21:47:13] 2025-10-14 12:46:41,155 | INFO     | corecount: 6
[2025-10-14 21:47:13] 2025-10-14 12:46:41,155 | INFO     | event service: False
[2025-10-14 21:47:13] 2025-10-14 12:46:41,155 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2349147, 11: 2349175, 4351: 2384314, 4352: 2384314, 4357: 2384636}
[2025-10-14 21:47:13] 2025-10-14 12:46:41,155 | INFO     | --------------------------------------------------
[2025-10-14 21:47:13] 2025-10-14 12:46:41,155 | INFO     | 
[2025-10-14 21:47:13] 2025-10-14 12:46:41,155 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-14 21:47:13] 2025-10-14 12:46:41,162 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,162 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,162 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,162 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,162 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,162 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,162 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,162 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,163 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,163 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,163 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,163 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,163 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,163 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,163 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,163 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 21:47:13] 2025-10-14 12:46:41,163 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,163 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 21:47:13] 2025-10-14 12:46:41,163 | INFO     | job 6838364774 has completed (purged errors)
[2025-10-14 21:47:13] 2025-10-14 12:46:41,163 | INFO     | overall cleanup function is called
[2025-10-14 21:47:13] 2025-10-14 12:46:41,198 | WARNING  | process 304489 can no longer be monitored (due to stat problems) - aborting
[2025-10-14 21:47:13] 2025-10-14 12:46:41,230 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 21:47:13] 2025-10-14 12:46:41,230 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 21:47:13] 2025-10-14 12:46:41,230 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-14 21:47:13] 2025-10-14 12:46:41,230 | WARNING  | maxPSS not found in memory monitor output
[2025-10-14 21:47:13] 2025-10-14 12:46:41,231 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/slots/0/PanDA_Pilot-6838364774/payload.stdout) since it has not been created yet
[2025-10-14 21:47:13] 2025-10-14 12:46:41,231 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-14 21:47:13] 2025-10-14 12:46:41,236 | INFO     | sufficient remaining disk space (113160224768 B)
[2025-10-14 21:47:13] 2025-10-14 12:46:41,236 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-10-14 21:47:13] 2025-10-14 12:46:41,236 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6838364774/HITS.46676269._056355.pool.root.1 since it does not exist
[2025-10-14 21:47:13] 2025-10-14 12:46:41,276 | INFO     | number of running child processes to parent process 304489: 1
[2025-10-14 21:47:13] 2025-10-14 12:46:41,276 | INFO     | maximum number of monitored processes: 6
[2025-10-14 21:47:13] 2025-10-14 12:46:41,276 | INFO     | aborting job monitoring since job object (job id=6838364774) has expired
[2025-10-14 21:47:13] 2025-10-14 12:46:42,169 | INFO     | --- collectZombieJob: --- 10, [304489]
[2025-10-14 21:47:13] 2025-10-14 12:46:42,169 | INFO     | zombie collector waiting for pid 304489
[2025-10-14 21:47:13] 2025-10-14 12:46:42,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 21:47:13] 2025-10-14 12:46:42,169 | INFO     | collected zombie processes
[2025-10-14 21:47:13] 2025-10-14 12:46:42,169 | INFO     | will attempt to kill all subprocesses of pid=304489
[2025-10-14 21:47:13] 2025-10-14 12:46:42,207 | INFO     | process IDs to be killed: [304489] (in reverse order)
[2025-10-14 21:47:13] 2025-10-14 12:46:42,229 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 21:47:13] 2025-10-14 12:46:42,229 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 21:47:13] 2025-10-14 12:46:42,230 | INFO     | did not find any defunct processes belonging to 304489
[2025-10-14 21:47:13] 2025-10-14 12:46:42,231 | INFO     | did not find any defunct processes belonging to 304489
[2025-10-14 21:47:13] 2025-10-14 12:46:42,231 | INFO     | ready for new job
[2025-10-14 21:47:13] 2025-10-14 12:46:42,231 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 21:47:13] 2025-10-14 12:46:42,232 | INFO     | ***************************************
[2025-10-14 21:47:13] 2025-10-14 12:46:42,232 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 21:47:13] 2025-10-14 12:46:42,232 | INFO     | ***************************************
[2025-10-14 21:47:13] 2025-10-14 12:46:42,232 | INFO     | 
[2025-10-14 21:47:13] 2025-10-14 12:46:42,232 | INFO     | architecture information:
[2025-10-14 21:47:13] 2025-10-14 12:46:42,233 | INFO     | executing command: cat /etc/os-release
[2025-10-14 21:47:13] 2025-10-14 12:46:42,239 | INFO     | cat /etc/os-release:
[2025-10-14 21:47:13] NAME="CentOS Linux"
[2025-10-14 21:47:13] VERSION="7 (Core)"
[2025-10-14 21:47:13] ID="centos"
[2025-10-14 21:47:13] ID_LIKE="rhel fedora"
[2025-10-14 21:47:13] VERSION_ID="7"
[2025-10-14 21:47:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 21:47:13] ANSI_COLOR="0;31"
[2025-10-14 21:47:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 21:47:13] HOME_URL="https://www.centos.org/"
[2025-10-14 21:47:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 21:47:13] 
[2025-10-14 21:47:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 21:47:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 21:47:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 21:47:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 21:47:13] 
[2025-10-14 21:47:13] 2025-10-14 12:46:42,239 | INFO     | ***************************************
[2025-10-14 21:47:13] 2025-10-14 12:46:42,742 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-14 21:47:13] 2025-10-14 12:46:42,749 | INFO     | sufficient remaining disk space (113160224768 B)
[2025-10-14 21:47:13] 2025-10-14 12:46:42,749 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 21:47:13] 2025-10-14 12:46:42,749 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 21:47:13] 2025-10-14 12:46:42,749 | INFO     | update_server=False
[2025-10-14 21:47:13] 2025-10-14 12:46:42,749 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 21:47:13] 2025-10-14 12:46:42,749 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 21:47:13] 2025-10-14 12:46:42,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 21:47:13] 2025-10-14 12:46:42,749 | INFO     | aborting loop
[2025-10-14 21:47:13] 2025-10-14 12:46:42,776 | INFO     | all payload control threads have been joined
[2025-10-14 21:47:13] 2025-10-14 12:46:42,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 21:47:13] 2025-10-14 12:46:42,979 | INFO     | all job control threads have been joined
[2025-10-14 21:47:13] 2025-10-14 12:46:43,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 21:47:13] 2025-10-14 12:46:43,754 | INFO     | [job] retrieve thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:43,754 | INFO     | [job] queue monitor thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:43,755 | INFO     | [job] job monitor thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:43,781 | INFO     | [payload] control thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:43,812 | INFO     | [data] copytool_in thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:43,843 | INFO     | all data control threads have been joined
[2025-10-14 21:47:13] 2025-10-14 12:46:43,984 | INFO     | [job] control thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:44,180 | INFO     | [payload] validate_post thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:44,726 | INFO     | [job] validate thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:44,848 | INFO     | [data] control thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:44,923 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:44,932 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:44,995 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:45,277 | INFO     | [payload] failed_post thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:45,472 | INFO     | [data] copytool_out thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:46,845 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:53,359 | INFO     | job.realtimelogging is not enabled
[2025-10-14 21:47:13] 2025-10-14 12:46:54,364 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 21:47:13] 2025-10-14 12:46:57,923 | INFO     | [monitor] cgroup control has ended
[2025-10-14 21:47:13] 2025-10-14 12:46:58,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140372437866304)>', '<ExcThread(monitor, started 140371795367680)>']
[2025-10-14 21:47:13] 2025-10-14 12:47:03,222 | INFO     | all workflow threads have been joined
[2025-10-14 21:47:13] 2025-10-14 12:47:03,222 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 21:47:13] 2025-10-14 12:47:03,222 | INFO     | traces error code: 0
[2025-10-14 21:47:13] 2025-10-14 12:47:03,223 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 21:47:13] 2025-10-14 12:47:13,625 | INFO     | PID=297753 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-14 21:47:13] 2025-10-14 12:47:13,625 | INFO     | .. there are 2 such processes running
[2025-10-14 21:47:13] 2025-10-14 12:47:13,625 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 21:47:13] 2025-10-14 12:47:13,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 21:47:13] 2025-10-14 12:47:13,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 21:47:13] 2025-10-14 12:47:13,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 21:47:13] 2025-10-14 12:47:13,626 | INFO     | [monitor] control thread has ended
[2025-10-14 21:47:13] 2025-10-14 12:47:13,666 [wrapper] ==== pilot stdout END ====
[2025-10-14 21:47:13] 2025-10-14 12:47:13,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 21:47:13] 2025-10-14 12:47:13,669 [wrapper] pilotpid: 297753
[2025-10-14 21:47:13] 2025-10-14 12:47:13,670 [wrapper] Pilot exit status: 0
[2025-10-14 21:47:13] 2025-10-14 12:47:13,675 [wrapper] pandaids: 6838364774
[2025-10-14 21:47:13] 2025-10-14 12:47:13,689 [wrapper] cleanup supervisor_pilot  320246 297754
[2025-10-14 21:47:13] 2025-10-14 12:47:13,690 [wrapper] Test setup, not cleaning
[2025-10-14 21:47:13] 2025-10-14 12:47:13,691 [wrapper] apfmon messages muted
[2025-10-14 21:47:13] 2025-10-14 12:47:13,692 [wrapper] ==== wrapper stdout END ====
[2025-10-14 21:47:13] 2025-10-14 12:47:13,693 [wrapper] ==== wrapper stderr END ====
[2025-10-14 21:47:13]  *** Error codes and diagnostics ***
[2025-10-14 21:47:13]     "exeErrorCode": 0,
[2025-10-14 21:47:13]     "exeErrorDiag": "",
[2025-10-14 21:47:13]     "pilotErrorCode": 0,
[2025-10-14 21:47:13]     "pilotErrorDiag": "",
[2025-10-14 21:47:13]  *** Listing of results directory ***
[2025-10-14 21:47:13] total 407324
[2025-10-14 21:47:13] -rw-r--r--. 1 boinc boinc    557409 Oct 11 19:52 pilot3.tar.gz
[2025-10-14 21:47:13] -rwx------. 1 boinc boinc     36292 Oct 11 20:00 runpilot2-wrapper.sh
[2025-10-14 21:47:13] -rw-r--r--. 1 boinc boinc      5112 Oct 11 20:00 queuedata.json
[2025-10-14 21:47:13] -rw-r--r--. 1 boinc boinc       100 Oct 14 20:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 21:47:13] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 20:33 run_atlas
[2025-10-14 21:47:13] -rw-r--r--. 1 boinc boinc       105 Oct 14 20:33 job.xml
[2025-10-14 21:47:13] -rw-r--r--. 2 boinc boinc     15120 Oct 14 20:33 start_atlas.sh
[2025-10-14 21:47:13] drwxrwx--x. 2 boinc boinc        68 Oct 14 20:33 shared
[2025-10-14 21:47:13] -rw-r--r--. 2 boinc boinc    569677 Oct 14 20:33 input.tar.gz
[2025-10-14 21:47:13] -rw-r--r--. 2 boinc boinc 218624368 Oct 14 20:33 EVNT.46676267._002220.pool.root.1
[2025-10-14 21:47:13] -rw-r--r--. 1 boinc boinc         0 Oct 14 20:33 boinc_lockfile
[2025-10-14 21:47:13] -rw-r--r--. 1 boinc boinc      2550 Oct 14 20:33 pandaJob.out
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc    973972 Oct 14 20:33 agis_schedconf.cvmfs.json
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc   1560580 Oct 14 20:33 agis_ddmendpoints.agis.ALL.json
[2025-10-14 21:47:13] drwx------. 5 boinc boinc      4096 Oct 14 20:33 pilot3
[2025-10-14 21:47:13] -rw-r--r--. 1 boinc boinc      9346 Oct 14 20:34 init_data.xml
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc 192664244 Oct 14 21:46 HITS.46676269._056355.pool.root.1
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc        95 Oct 14 21:46 pilot_heartbeat.json
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc      1017 Oct 14 21:46 memory_monitor_summary.json
[2025-10-14 21:47:13] -rw-r--r--. 1 boinc boinc       529 Oct 14 21:46 boinc_task_state.xml
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc    302502 Oct 14 21:46 log.46676269._056355.job.log.tgz.1
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc      7770 Oct 14 21:46 heartbeat.json
[2025-10-14 21:47:13] -rw-r--r--. 1 boinc boinc      8192 Oct 14 21:47 boinc_mmap_file
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc       821 Oct 14 21:47 pilotlog.txt
[2025-10-14 21:47:13] -rw-r--r--. 1 boinc boinc        27 Oct 14 21:47 wrapper_checkpoint.txt
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc    657000 Oct 14 21:47 log.46676269._056355.job.log.1
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc       357 Oct 14 21:47 output.list
[2025-10-14 21:47:13] -rw-r--r--. 1 boinc boinc       620 Oct 14 21:47 runtime_log
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc    983040 Oct 14 21:47 result.tar.gz
[2025-10-14 21:47:13] -rw-r--r--. 1 boinc boinc      8651 Oct 14 21:47 runtime_log.err
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc       637 Oct 14 21:47 CAYMDmJWmR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmYiRMDmnnAmZm.diag
[2025-10-14 21:47:13] -rw-r--r--. 1 boinc boinc     22680 Oct 14 21:47 stderr.txt
[2025-10-14 21:47:13] HITS file was successfully produced:
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc 192664244 Oct 14 21:46 shared/HITS.pool.root.1
[2025-10-14 21:47:13]  *** Contents of shared directory: ***
[2025-10-14 21:47:13] total 403192
[2025-10-14 21:47:13] -rw-r--r--. 2 boinc boinc     15120 Oct 14 20:33 start_atlas.sh
[2025-10-14 21:47:13] -rw-r--r--. 2 boinc boinc    569677 Oct 14 20:33 input.tar.gz
[2025-10-14 21:47:13] -rw-r--r--. 2 boinc boinc 218624368 Oct 14 20:33 ATLAS.root_0
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc 192664244 Oct 14 21:46 HITS.pool.root.1
[2025-10-14 21:47:13] -rw-------. 1 boinc boinc    983040 Oct 14 21:47 result.tar.gz
21:47:15 (293956): run_atlas exited; CPU time 24002.857532
21:47:15 (293956): called boinc_finish(0)

</stderr_txt>
]]>

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